View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14074_high_2 (Length: 226)

Name: NF14074_high_2
Description: NF14074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14074_high_2
NF14074_high_2
[»] chr5 (25 HSPs)
chr5 (16-210)||(5894692-5894891)
chr5 (1-84)||(31084309-31084392)
chr5 (1-69)||(14674255-14674323)
chr5 (1-80)||(21351899-21351978)
chr5 (1-74)||(42893346-42893419)
chr5 (1-73)||(21191057-21191129)
chr5 (2-73)||(6247609-6247680)
chr5 (1-80)||(21522736-21522815)
chr5 (1-80)||(21533302-21533381)
chr5 (2-73)||(21576746-21576817)
chr5 (1-80)||(39698527-39698606)
chr5 (16-78)||(13287395-13287457)
chr5 (1-78)||(19579687-19579764)
chr5 (4-73)||(33178014-33178083)
chr5 (4-73)||(41633724-41633793)
chr5 (1-73)||(8420013-8420085)
chr5 (2-70)||(24906305-24906373)
chr5 (1-84)||(10298555-10298638)
chr5 (1-72)||(17177025-17177096)
chr5 (1-48)||(19552569-19552616)
chr5 (16-70)||(12159953-12160007)
chr5 (1-47)||(17123034-17123080)
chr5 (1-50)||(22013400-22013449)
chr5 (16-48)||(7677706-7677738)
chr5 (1-77)||(36642759-36642835)
[»] chr7 (18 HSPs)
chr7 (1-74)||(11061076-11061149)
chr7 (16-84)||(9778501-9778569)
chr7 (2-80)||(7438693-7438771)
chr7 (1-73)||(9408335-9408407)
chr7 (1-80)||(24339628-24339707)
chr7 (1-48)||(29763200-29763247)
chr7 (13-84)||(32094010-32094082)
chr7 (1-84)||(5409826-5409909)
chr7 (25-78)||(6028635-6028688)
chr7 (1-38)||(8478967-8479004)
chr7 (9-73)||(3991318-3991382)
chr7 (16-80)||(11665434-11665498)
chr7 (1-73)||(25481888-25481960)
chr7 (1-88)||(18215172-18215259)
chr7 (1-84)||(43027459-43027542)
chr7 (19-80)||(26033455-26033516)
chr7 (3-80)||(11272580-11272659)
chr7 (1-73)||(15680795-15680867)
[»] chr8 (24 HSPs)
chr8 (1-80)||(22651962-22652041)
chr8 (16-80)||(29447104-29447168)
chr8 (16-74)||(4298886-4298944)
chr8 (1-74)||(22197742-22197815)
chr8 (1-73)||(8343302-8343374)
chr8 (1-73)||(15816130-15816202)
chr8 (1-73)||(20873055-20873127)
chr8 (16-80)||(28745499-28745563)
chr8 (10-73)||(8342967-8343030)
chr8 (1-48)||(13436990-13437037)
chr8 (1-72)||(29510306-29510377)
chr8 (16-78)||(2572052-2572114)
chr8 (3-73)||(24613509-24613578)
chr8 (16-73)||(25566842-25566899)
chr8 (1-73)||(5813578-5813650)
chr8 (1-73)||(18170483-18170555)
chr8 (1-73)||(18634051-18634123)
chr8 (13-49)||(35519832-35519868)
chr8 (1-47)||(30271318-30271364)
chr8 (1-50)||(27101501-27101550)
chr8 (25-73)||(4948662-4948710)
chr8 (1-73)||(30077388-30077460)
chr8 (1-73)||(36450755-36450827)
chr8 (16-68)||(41831946-41831998)
[»] chr6 (26 HSPs)
chr6 (1-84)||(10770664-10770747)
chr6 (1-80)||(16766683-16766762)
chr6 (1-73)||(426515-426587)
chr6 (1-73)||(17841590-17841662)
chr6 (1-84)||(12696310-12696393)
chr6 (25-73)||(403865-403913)
chr6 (1-73)||(7938102-7938174)
chr6 (1-80)||(9107364-9107443)
chr6 (4-73)||(7977831-7977900)
chr6 (6-73)||(4877933-4878001)
chr6 (16-80)||(5970102-5970166)
chr6 (1-73)||(34595120-34595192)
chr6 (1-48)||(7265619-7265666)
chr6 (1-80)||(8365513-8365592)
chr6 (1-72)||(16833294-16833365)
chr6 (1-48)||(30866170-30866217)
chr6 (4-46)||(21424830-21424872)
chr6 (1-73)||(3209367-3209440)
chr6 (1-50)||(10842518-10842567)
chr6 (1-46)||(19147431-19147476)
chr6 (2-47)||(31959146-31959191)
chr6 (3-59)||(43704-43760)
chr6 (5-73)||(853860-853928)
chr6 (1-73)||(8776974-8777046)
chr6 (16-48)||(25010228-25010260)
chr6 (1-73)||(28152085-28152156)
[»] chr2 (17 HSPs)
chr2 (1-73)||(37558963-37559035)
chr2 (1-84)||(14996213-14996297)
chr2 (1-73)||(20539675-20539747)
chr2 (1-52)||(34337198-34337249)
chr2 (1-79)||(30717525-30717603)
chr2 (16-73)||(30335418-30335475)
chr2 (1-45)||(38117188-38117232)
chr2 (1-48)||(24894375-24894422)
chr2 (7-73)||(18255981-18256047)
chr2 (16-50)||(36409651-36409685)
chr2 (19-81)||(39026822-39026884)
chr2 (16-73)||(2438720-2438777)
chr2 (16-77)||(11223860-11223921)
chr2 (1-74)||(18841013-18841086)
chr2 (25-73)||(15657874-15657922)
chr2 (4-48)||(18420460-18420504)
chr2 (1-69)||(30404855-30404923)
[»] chr1 (24 HSPs)
chr1 (1-73)||(22881617-22881689)
chr1 (1-73)||(46348384-46348456)
chr1 (1-69)||(48450592-48450660)
chr1 (1-68)||(30359374-30359441)
chr1 (2-73)||(38078662-38078733)
chr1 (1-62)||(18556468-18556529)
chr1 (16-73)||(22515888-22515945)
chr1 (16-84)||(1486699-1486767)
chr1 (1-73)||(5927341-5927413)
chr1 (1-73)||(9103626-9103697)
chr1 (1-73)||(31672896-31672968)
chr1 (5-79)||(113289-113363)
chr1 (1-78)||(1704988-1705065)
chr1 (1-48)||(398791-398838)
chr1 (1-48)||(6427336-6427383)
chr1 (25-72)||(32461465-32461512)
chr1 (1-48)||(36905983-36906030)
chr1 (1-48)||(40285680-40285727)
chr1 (16-78)||(24577182-24577244)
chr1 (1-74)||(2896121-2896194)
chr1 (25-74)||(40258933-40258982)
chr1 (25-73)||(18337339-18337387)
chr1 (16-48)||(23738679-23738711)
chr1 (1-73)||(42359450-42359522)
[»] chr4 (16 HSPs)
chr4 (18-84)||(12895106-12895172)
chr4 (1-73)||(2361976-2362048)
chr4 (1-73)||(23292987-23293059)
chr4 (16-80)||(24613695-24613759)
chr4 (10-72)||(29205439-29205501)
chr4 (1-78)||(11596348-11596425)
chr4 (16-84)||(3947756-3947824)
chr4 (1-61)||(14465088-14465148)
chr4 (1-73)||(21945489-21945561)
chr4 (25-72)||(6485613-6485660)
chr4 (25-84)||(21720497-21720556)
chr4 (1-73)||(30298932-30299005)
chr4 (1-73)||(30327800-30327873)
chr4 (5-80)||(28084511-28084587)
chr4 (1-73)||(35157986-35158058)
chr4 (2-73)||(42640513-42640587)
[»] chr3 (26 HSPs)
chr3 (16-73)||(1509540-1509597)
chr3 (1-74)||(10268486-10268559)
chr3 (1-73)||(55401061-55401133)
chr3 (1-48)||(40052318-40052365)
chr3 (2-48)||(4987317-4987363)
chr3 (16-82)||(49651778-49651844)
chr3 (4-73)||(28917990-28918059)
chr3 (1-78)||(39756222-39756299)
chr3 (16-73)||(51206354-51206411)
chr3 (1-73)||(8587022-8587094)
chr3 (1-73)||(10335287-10335359)
chr3 (1-73)||(16000017-16000089)
chr3 (1-73)||(21479104-21479176)
chr3 (2-73)||(10954939-10955010)
chr3 (1-80)||(14829676-14829754)
chr3 (16-71)||(26508111-26508166)
chr3 (1-50)||(14747547-14747597)
chr3 (18-80)||(14832102-14832164)
chr3 (16-70)||(21256990-21257044)
chr3 (25-59)||(35222498-35222532)
chr3 (1-73)||(25775494-25775567)
chr3 (16-48)||(3164051-3164083)
chr3 (4-48)||(11610510-11610554)
chr3 (16-48)||(14979182-14979214)
chr3 (1-73)||(15796295-15796367)
chr3 (16-84)||(27505247-27505315)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-73)||(8784-8856)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-73)||(46668-46740)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-80)||(20158-20237)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-48)||(51797-51844)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-73)||(17750-17807)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-50)||(241580-241629)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-79)||(178813-178892)
[»] scaffold0450 (1 HSPs)
scaffold0450 (2-80)||(8629-8707)
[»] scaffold0722 (1 HSPs)
scaffold0722 (16-73)||(7033-7090)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-73)||(463-535)
[»] scaffold0004 (1 HSPs)
scaffold0004 (2-73)||(123612-123686)


Alignment Details
Target: chr5 (Bit Score: 140; Significance: 2e-73; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 5894891 - 5894692
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacaccggggcacatataatccaagaagtgttagtg 115  Q
    ||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||| ||| ||||| ||||    
T  5894891 acacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacaccgggacacgtataatctaaggagtgtcagtg 5894792  T
Q  116 ctttatattattgaatcaa-----atcatacatatgatgagttgtgatttgttagcaggactatgtgtcgtctaagcctaataggagcgagagcacctag 210  Q
    |||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5894791 ctttatattattgaatcaaatcaaatcatacatatgatgagttgtgatttgttagcaggactatgtgtcgtctaagcctaataggagcgagagcacctag 5894692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31084309 - 31084392
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||| ||| ||| ||||| ||||| |||| ||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacac 31084392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 14674255 - 14674323
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcgg 69  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||| | ||| ||||| ||||||    
T  14674255 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21351978 - 21351899
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||||||||||| ||||| || |||||| |||||| |||||||||| | | ||| ||||| |||||||||||||||||    
T  21351978 gacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcgg 21351899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42893346 - 42893419
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||  | | ||| ||||| |||||||||||    
T  42893346 gacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtca 42893419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21191129 - 21191057
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||  || |||||||| |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  21191129 gacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 6247609 - 6247680
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||| || ||||| || |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21522736 - 21522815
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || |||||||| ||||||| ||||||| |||||||| | | ||| ||||| |||||||||| ||||||    
T  21522736 gacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21522815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 21533302 - 21533381
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || |||||||| ||||||| ||||||| |||||||| | | ||| ||||| |||||||||| ||||||    
T  21533302 gacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcgg 21533381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21576817 - 21576746
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||| || ||||||||||| |||||||||||||||||||||||| | | ||| ||||| ||||| ||||    
T  21576817 acactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 21576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39698527 - 39698606
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| |  |||||||| |||||||||||||||||||||||| | | ||| ||||| |||| ||||| ||||||    
T  39698527 gacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 39698606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 13287457 - 13287395
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    |||||| | |||||||||||||||||||||||| | | ||||||||| |||||||||| ||||    
T  13287457 acacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19579687 - 19579764
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    |||||||| || || |||||||| ||||||||| |||||||||||||||| |  || ||||| |||||||||| ||||    
T  19579687 gacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtc 19579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 33178014 - 33178083
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || ||||| || ||||||| |||||||||||||||||| | ||| ||||| ||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 41633724 - 41633793
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || |||||||| ||||||||||||| | |||||||| | | ||| ||||||||||||||||    
T  41633724 actgacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtc 41633793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8420013 - 8420085
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || ||| |||| ||||||||||||||| |||||||| ||| ||| ||||| ||||||||||    
T  8420013 gacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc 8420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 24906373 - 24906305
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggt 70  Q
    |||||||||| ||||||||| | ||||||||||||||| |||||||| | | ||| ||||| |||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggt 24906305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 10298555 - 10298638
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||| |||| || ||||| || ||||||||||||| |||||||||  ||| ||| ||||| |||||||||| | ||||||||    
T  10298555 gacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacac 10298638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 17177096 - 17177025
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    |||||||| || ||||||||||| ||||||||||||||||| | |||| | | ||| ||||| |||||||||    
T  17177096 gacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcggtgt 17177025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19552616 - 19552569
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||||    
T  19552616 gacactgacacgccgacacagttaataatttgaaaaaatcacataatt 19552569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 12159953 - 12160007
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggt 70  Q
    ||||| || ||||||| |||||| ||||||||||||| ||| |||||||||||||    
T  12159953 acacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcggt 12160007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17123034 - 17123080
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataat 47  Q
    ||||||||||| ||||||| ||| ||||||||| |||||||||||||    
T  17123034 gacactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22013400 - 22013449
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataattta 50  Q
    ||||||||||| || |||||||| |||||||| |||||| ||||||||||    
T  22013400 gacactgacacgccgacacagctaataatttggaaaaattacataattta 22013449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 7677706 - 7677738
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||||||||||||||||||||    
T  7677706 acacagctaataatttgaaaaaatcacataatt 7677738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 36642835 - 36642759
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgt 77  Q
    ||||||||||| || |||||| | ||||||||||||| | ||||| |||| | ||| || || ||||||||||||||    
T  36642835 gacactgacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcggtgtcatgt 36642759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11061149 - 11061076
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| | ||| ||||| |||||||||||    
T  11061149 gacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtca 11061076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 9778501 - 9778569
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||||||||||||||||||||||||| | | ||| ||||| |||||||||| ||||||||||    
T  9778501 acacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacac 9778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 7438693 - 7438771
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||||||  || |||||| | |||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||||    
T  7438693 acactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcgg 7438771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9408407 - 9408335
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||||| |||||  | |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  9408407 gacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 9408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24339628 - 24339707
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||| |||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| |||||||||| ||||||    
T  24339628 gacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 24339707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29763247 - 29763200
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  29763247 gacactgacacaccaacacaacttataatttgaaaaaatcacataatt 29763200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 32094082 - 32094010
Alignment:
Q  13 ccaacacagctgataatttgaaaaaa-tcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||||| || |||||||||||||| |||||||||| | | ||| |||||||||||||||| ||||||||||    
T  32094082 ccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacac 32094010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 5409909 - 5409826
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||| |  | |||||| |||||||||||||||||||||||| | |  || ||||| |||||||||| ||||||||||    
T  5409909 gacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacac 5409826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 6028635 - 6028688
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    |||||||||||| || |||||||||||| ||| |||||||||||||||| ||||    
T  6028635 ataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtc 6028688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8478967 - 8479004
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaa 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8478967 gacactgacacgccaacacagctgataatttgaaaaaa 8479004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 3991318 - 3991382
Alignment:
Q  9 cacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||| ||||| || |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 3991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 11665498 - 11665434
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||| || |||||||||||||||||||||||| | ||||| || || ||||| |||||||||||    
T  11665498 acacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcgg 11665434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25481888 - 25481960
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| ||| ||||||    
T  25481888 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtc 25481960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 18215259 - 18215172
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacaccggg 88  Q
    |||||| |||| || || ||||| |||||||||||||||||||||||  | | ||  ||||| |||||||||| |||| |||||||||    
T  18215259 gacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacaccggg 18215172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 43027542 - 43027459
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||||||||  | || ||||| |||||||||||||||||||||||  | | ||| ||||| |||||||||| |||| |||||    
T  43027542 gacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacac 43027459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 26033516 - 26033455
Alignment:
Q  19 cagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||| |||||||||||||||||||||||| | | ||| ||||| ||||||| || ||||||    
T  26033516 cagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcgg 26033455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 11272659 - 11272580
Alignment:
Q  3 cactgacacaccaacacagctgataatttgaaaaaatcac--ataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||| || || ||||| |||||||||||||||||||||  |||||| | | ||| ||||| |||||||||| ||||||    
T  11272659 cactgagacgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcgg 11272580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15680795 - 15680867
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||| |||| ||||||  |||||||||||||||||| | ||| || || ||||||||||    
T  15680795 gacactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15680867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 22651962 - 22652041
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||| ||| ||| ||||| |||||||||| ||||||    
T  22651962 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcgg 22652041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 29447168 - 29447104
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||| || ||||||||| |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  29447168 acacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcgg 29447104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 4298944 - 4298886
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    |||||| | |||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  4298944 acacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtca 4298886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 22197815 - 22197742
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    |||||| |||| ||||||||||| ||||||||||||| |||||||||||| | ||| ||||| |||| ||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtca 22197742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8343302 - 8343374
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| |||||||| ||| |||| |||||||||||||||||||||||||| | ||| ||||| |||| |||||    
T  8343302 gacaccgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 8343374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15816202 - 15816130
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || |||||||||||||||||||||||||| | ||| || || ||||||||||    
T  15816202 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20873055 - 20873127
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||| || | |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  20873055 gacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 28745499 - 28745563
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||| ||| ||||||||||||| |||||||||| ||| ||||||||||||||| |||| ||||||    
T  28745499 acactgctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcgg 28745563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 8342967 - 8343030
Alignment:
Q  10 acaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| ||| |||| |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 13437037 - 13436990
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||    
T  13437037 gacactgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29510377 - 29510306
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    ||||||||||| || |||||||| ||||||||||||||||||| |||| | | ||| ||||| |||||||||    
T  29510377 gacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 2572114 - 2572052
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    ||||| || |||||||||||||||||||||||||| | ||| ||||| |||||||||| ||||    
T  2572114 acacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc 2572052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  3 cactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||| | | ||| ||||| ||||||||||    
T  24613509 cactgacacaccgacacagctaataatttg-aaaaatcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 25566842 - 25566899
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  25566842 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5813578 - 5813650
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| ||||| || |||||||| ||||||||||||| ||||||| |||| | ||| ||||| ||||||||||    
T  5813578 gacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 5813650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18170555 - 18170483
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||  | | ||||||||||||| |||||||| ||| ||| ||||||||||||||||    
T  18170555 gacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18634123 - 18634051
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||  | | ||||||||||||| |||||||| ||| ||| ||||||||||||||||    
T  18634123 gacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 35519868 - 35519832
Alignment:
Q  13 ccaacacagctgataatttgaaaaaatcacataattt 49  Q
    ||||||||||| |||||||||||||||||||||||||    
T  35519868 ccaacacagctaataatttgaaaaaatcacataattt 35519832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30271364 - 30271318
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataat 47  Q
    ||||||||||| || |||||||| || ||||||||||||||||||||    
T  30271364 gacactgacacgccgacacagctaatcatttgaaaaaatcacataat 30271318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27101501 - 27101550
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataattta 50  Q
    |||| |||||| || |||| ||| ||||||||||||||||||||||||||    
T  27101501 gacattgacacgccgacaccgctaataatttgaaaaaatcacataattta 27101550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 4948662 - 4948710
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  4948662 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 30077460 - 30077388
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| ||||| ||||| ||||| |||||||||||| ||||||||||| | | ||| ||||| |||| |||||    
T  30077460 gacacggacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtc 30077388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36450827 - 36450755
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || ||||||||||||||||||| |||| | | ||| ||||| ||| ||||||    
T  36450827 gacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtc 36450755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 41831998 - 41831946
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcg 68  Q
    |||||| | |||||||||||||||||||||||| | | ||||||||| |||||    
T  41831998 acacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 41831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10770747 - 10770664
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||| | | ||| ||||| |||||||||| |||| |||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacac 10770664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 16766683 - 16766762
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| |||||||||| ||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcgg 16766762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 426587 - 426515
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  426587 gacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtc 426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 17841662 - 17841590
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||| | ||| ||||| || |||||||    
T  17841662 gacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtc 17841590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12696310 - 12696393
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||| || |||||||| ||||||||||||||| |||||||| | | ||| ||||| |||| ||||| ||||||||||    
T  12696310 gacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacac 12696393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 403913 - 403865
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  403913 ataatttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtc 403865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7938102 - 7938174
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| ||||||||||||||||| |||||||| | ||| || || ||||||||||    
T  7938102 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtc 7938174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9107443 - 9107364
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||| |||| || |||||||| ||||||||||||||||||| |||| | | ||| ||||| |||||||||| ||||||    
T  9107443 gacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcgg 9107364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 7977900 - 7977831
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || |||||||| ||||||||||||||| |||||||| | | ||| ||||| ||||||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 4877933 - 4878001
Alignment:
Q  6 tgacacaccaacacagctgataatttgaaaaaa-tcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||| |||||||| |||||||||||||| |||||||||| | | ||| ||||| ||||||||||    
T  4877933 tgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc 4878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 5970166 - 5970102
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||| | |||||||||||||||||||||||| | | ||| ||||||||| |||||| ||||||    
T  5970166 acacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcgg 5970102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 34595120 - 34595192
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || ||||| || |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  34595120 gacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7265666 - 7265619
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataatt 7265619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8365592 - 8365513
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || ||||| || |||||||||||| |||||||||||   | ||| ||||| |||||||||| ||||||    
T  8365592 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcgg 8365513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16833294 - 16833365
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    ||||||||||| || ||||| || ||||||||||||||||||||| || | | ||| ||||| |||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30866217 - 30866170
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||| ||||||||||||| ||| ||||||||| ||||||||||||||    
T  30866217 gacaccgacacaccaacaccgctaataatttgagaaaatcacataatt 30866170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 21424872 - 21424830
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataa 46  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  21424872 actgacacgccaacaccgctaataatttgaaaaaatcacataa 21424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3209367 - 3209440
Alignment:
Q  1 gacactgacacaccaacacagctgataatttg-aaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| ||||| || |||||||| |||||||| |||||||||||||||||| | | | ||||| ||||||||||    
T  3209367 gacacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtc 3209440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 10842518 - 10842567
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataattta 50  Q
    ||||| ||||| || |||| ||| ||||||||||||||||||||||||||    
T  10842518 gacacggacacgccgacaccgctaataatttgaaaaaatcacataattta 10842567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19147476 - 19147431
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataa 46  Q
    |||||||||||||  |||||||| ||||||||| ||||||||||||    
T  19147476 gacactgacacacggacacagctaataatttgagaaaatcacataa 19147431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 31959146 - 31959191
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataat 47  Q
    |||||||||| ||  ||||||| |||||||||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataat 31959191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 43704 - 43760
Alignment:
Q  3 cactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaacta 59  Q
    |||| |||||||||||| ||| ||||||||| |||||||| ||||| ||| ||||||    
T  43704 cactaacacaccaacactgctaataatttgagaaaatcacgtaattcaatgtaacta 43760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 853928 - 853860
Alignment:
Q  5 ctgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||| || ||||| || |||||||||||||||||||||||| | |  || ||||| ||||||||||    
T  853928 ctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8777046 - 8776974
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || ||||||||||||||||||| |||| | | ||| ||||| ||| ||||||    
T  8777046 gacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtc 8776974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 25010260 - 25010228
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||||||||||||||||||||    
T  25010260 acacagctaataatttgaaaaaatcacataatt 25010228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28152085 - 28152156
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||| |||| |||||||| ||||||||||||||| | | ||| ||||| ||||||||||    
T  28152085 gacactgacacgccgacaaagctaataatttg-aaaaatcacataattcagtgtaattacaagtgtcggtgtc 28152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37558963 - 37559035
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| |||||||| ||||||||||||||| ||| ||| ||||| ||||||||||    
T  37558963 gacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 14996297 - 14996213
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaa-aaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||||  || |||||||| |||||||||| ||||||| |||||||| | ||| ||||| |||||||||| ||||||||||    
T  14996297 gacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20539747 - 20539675
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||  | |||||||| ||||||||||||||||| |||||||| | ||| ||||| ||||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 20539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34337249 - 34337198
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaat 52  Q
    |||| |||||| || |||||| ||||||||||||||||||||||||||||||    
T  34337249 gacattgacacgccgacacagttgataatttgaaaaaatcacataatttaat 34337198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30717603 - 30717525
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcg 79  Q
    |||||||||| ||| ||| |||| |||||||||||||||||||||||| | | ||| ||||| ||||| |||| |||||    
T  30717603 gacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcg 30717525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 30335418 - 30335475
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| || ||||||||||||||| |||||||||| | ||| ||||||||||||||||    
T  30335418 acacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc 30335475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 38117232 - 38117188
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacata 45  Q
    ||||||||||| || |||||||| |||||||||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacata 38117188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24894375 - 24894422
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||||||| ||||||| ||||||||||||||||    
T  24894375 gacactgacacgccgacacagctaataatttaaaaaaatcacataatt 24894422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 18256047 - 18255981
Alignment:
Q  7 gacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||  |||||| | ||||||| |||||||||||||||||||| ||| || || ||||||||||    
T  18256047 gacacactgacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcggtgtc 18255981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 36409685 - 36409651
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataattta 50  Q
    |||| ||||||||||||||||||||||||||||||    
T  36409685 acaccgctgataatttgaaaaaatcacataattta 36409651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 39026822 - 39026884
Alignment:
Q  19 cagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgga 81  Q
    ||||| |||| |||| ||||||||||| |||||| ||| || |||||||||||| ||||||||    
T  39026822 cagctaataacttgagaaaatcacatattttaatgtaattataaatgtcggtgttatgtcgga 39026884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 2438777 - 2438720
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| ||||||| |||||||||||||||| | | ||| ||||| ||||||||||    
T  2438777 acacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 2438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 11223921 - 11223860
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgt 77  Q
    |||||||| ||| ||||||||||| |||||||| | | ||| ||||| ||||||||||||||    
T  11223921 acacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgt 11223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18841086 - 18841013
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    ||||||||||| |  ||||| || ||||||||||||||| |||||||| | | ||| ||||| |||||||||||    
T  18841086 gacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtca 18841013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 15657874 - 15657922
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| ||||||||||||||| | | ||| ||||||||||||||||    
T  15657874 ataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtc 15657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 18420504 - 18420460
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  18420504 actgacacgccaacactgctaataatttgagaaaatcacataatt 18420460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 30404923 - 30404855
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcgg 69  Q
    ||||||||||| || |||| | | |||||||||||||||||||||||| | | ||| ||||| ||||||    
T  30404923 gacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgg 30404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22881689 - 22881617
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46348456 - 46348384
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| ||||||||||||||||| |||||||| | ||| ||||| ||||||||||    
T  46348456 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 46348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 48450660 - 48450592
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcgg 69  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  48450660 gacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30359374 - 30359441
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcg 68  Q
    ||||||||||||||  |||| ||||||||||||||||||||||||||||| | ||||| ||| |||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 38078733 - 38078662
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||  | |||||||| |||||||||||||||||||||||| ||| ||| ||||| ||||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18556529 - 18556468
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaa 62  Q
    ||||||||||| || |||||||| |||||||||||| ||||||||||||||| ||| |||||    
T  18556529 gacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaa 18556468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 22515945 - 22515888
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  22515945 acacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 1486767 - 1486699
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||||| |||||||||||||||||||||||| | | ||| || || |||||||||| ||||||||||    
T  1486767 acacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacac 1486699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5927413 - 5927341
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| | ||||| ||| ||||||||||||||||| |||||||||| ||| ||||| |||| |||||    
T  5927413 gacactgacacgctaacactgctaataatttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtc 5927341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9103626 - 9103697
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  9103626 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtc 9103697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31672968 - 31672896
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||| | | ||| ||||| | ||||||||    
T  31672968 gacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 113289 - 113363
Alignment:
Q  5 ctgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcg 79  Q
    ||||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| ||| |||||| |||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcg 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1705065 - 1704988
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    ||||| |||||||| ||||| || |||||||||||||||||||||||| |   ||| ||||| |||||||||| ||||    
T  1705065 gacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 398838 - 398791
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||| ||| ||||||||||||||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataatt 398791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6427336 - 6427383
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataatt 6427383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 32461512 - 32461465
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    |||||||||||||||||||||||||||| ||| ||||| ||| |||||    
T  32461512 ataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt 32461465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36905983 - 36906030
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||||||||||| ||| ||||| ||| ||||||||||||||    
T  36905983 gacactgacacaccaacaccgctaataatctgagaaaatcacataatt 36906030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40285727 - 40285680
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||||||||||| ||| ||||||||| |||||| |||||||    
T  40285727 gacactgacacaccaacaccgctaataatttgagaaaatcgcataatt 40285680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 24577244 - 24577182
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    ||||| || |||||||||||||||||||||||| | | ||| ||||| |||||||||| ||||    
T  24577244 acacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2896194 - 2896121
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    ||||||||||| || |||| ||| ||||||||| |||||||||||||| | | || ||| | ||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtca 2896121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 40258982 - 40258933
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    |||||||||||||||||||||||| | | ||| ||||| |||||||||||    
T  40258982 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtca 40258933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 18337339 - 18337387
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  18337339 ataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 23738679 - 23738711
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||||||||||||||||||||    
T  23738679 acacagctaataatttgaaaaaatcacataatt 23738711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42359522 - 42359450
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| |  ||||| || ||||||||||||||||||| |||| | | ||| ||||| ||||||||||    
T  42359522 gacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 12895172 - 12895106
Alignment:
Q  18 acagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||| |||||||||||||||||||||||| ||  ||| ||||| |||||||||| ||||||||||    
T  12895172 acagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacac 12895106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 2362048 - 2361976
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| ||||||||| |||||||| ||||||||||||||| |||||||||| | ||| || || ||||||||||    
T  2362048 gacattgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 23293059 - 23292987
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  23293059 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 23292987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 80
Target Start/End: Complemental strand, 24613759 - 24613695
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||| || ||||||||| |||||||||||||| ||| ||| ||||| |||||||||||||||||    
T  24613759 acacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcgg 24613695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 29205439 - 29205501
Alignment:
Q  10 acaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    |||||||||| ||| |||||||||||||||||||||||| | | ||| ||||| |||||||||    
T  29205439 acaccaacacggctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 29205501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11596425 - 11596348
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    |||||||| || |||||| |||| |||||||||||||||||||||||| | | ||| ||||| ||| |||||| ||||    
T  11596425 gacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 3947824 - 3947756
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||||| |||||||||||||||| ||||||| | | ||| ||||| |||| ||||| ||||||||||    
T  3947824 acacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacac 3947756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14465148 - 14465088
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactaca 61  Q
    ||||||||||| | |||||| || |||||||||||||||||||||||| ||| ||| ||||    
T  14465148 gacactgacactctaacacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21945489 - 21945561
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||  || |||||||| ||||||||||||||| |||||||| | | ||| ||||| ||||||||||    
T  21945489 gacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 6485660 - 6485613
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgt 72  Q
    |||||||||||||||||||||||||| | ||| ||||| |||||||||    
T  6485660 ataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 21720556 - 21720497
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    ||||||||| ||||||| |||||||||| |||||| | ||||||||||| ||| ||||||    
T  21720556 ataatttgataaaatcatataatttaatgtaactatatatgtcggtgtcttgttggacac 21720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30298932 - 30299005
Alignment:
Q  1 gacactgacacaccaacacagctgataatttg-aaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| |||||||| ||||||| |||||||| | | ||| ||||| ||||||||||    
T  30298932 gacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30299005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30327800 - 30327873
Alignment:
Q  1 gacactgacacaccaacacagctgataatttg-aaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| |||||||| ||||||| |||||||| | | ||| ||||| ||||||||||    
T  30327800 gacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 30327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 28084511 - 28084587
Alignment:
Q  5 ctgacacaccaacacagctgataatttgaaaa-aatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||| || |||||||| | |||||||||| |||||||||||| ||| ||| ||||| |||| ||||| ||||||    
T  28084511 ctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcgg 28084587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35158058 - 35157986
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || || || || |||||||| ||||||||||||||||| | ||| || || ||||||||||    
T  35158058 gacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 42640513 - 42640587
Alignment:
Q  2 acactgacacaccaacacagctgataatttg---aaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| ||||| || |||||||||||||||||   |||||||||||||||| | | ||| ||||| ||||||||||    
T  42640513 acacggacacgccgacacagctgataatttgaaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 42640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 1509540 - 1509597
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  1509540 acacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10268559 - 10268486
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtca 74  Q
    ||||||||||| || |||||| | |||||||||||||||||||||||||| | ||| ||||| |||| ||||||    
T  10268559 gacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtca 10268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55401061 - 55401133
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || || ||||| || |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  55401061 gacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 55401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40052318 - 40052365
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 4987363 - 4987317
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 4987317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 49651844 - 49651778
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggac 82  Q
    |||| ||| |||||||||||||||||||||||| | | ||| ||||| |||||||||| ||||||||    
T  49651844 acacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 28917990 - 28918059
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || ||| |||| |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  28917990 actgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39756222 - 39756299
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtc 78  Q
    ||||||||||| || ||| |  | ||||||| |||||||||||||||||||| ||| ||||| |||||||||| ||||    
T  39756222 gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgtc 39756299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 51206411 - 51206354
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| |||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  51206411 acacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8587094 - 8587022
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| ||  ||||||||||||||||||||||| | | ||| ||||| ||||||||||    
T  8587094 gacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10335359 - 10335287
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || ||||||||||||| ||||||| |||| | ||| ||||| ||||||||||    
T  10335359 gacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 16000089 - 16000017
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || ||||| || ||||||| ||||||| |||||||| | | ||||||||| ||||||||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtc 16000017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21479104 - 21479176
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| ||||||||||||||||||| |||| | | ||| ||| | ||||||||||    
T  21479104 gacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||| || ||||| || |||||||||||||||||||||||| | | |||  |||| ||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14829676 - 14829754
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    ||||||||||| || |||||||| |||||||| ||||||||||||||| |   ||| ||||| |||||||||| ||||||    
T  14829676 gacactgacacgccgacacagctaataatttg-aaaaatcacataattcatggtaattacaagtgtcggtgtcgtgtcgg 14829754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 26508111 - 26508166
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtg 71  Q
    |||||||| |||||||||||||||||||||||| | | ||| ||||| ||||||||    
T  26508111 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14747547 - 14747597
Alignment:
Q  1 gacactgacacaccaacacagctgataatttg-aaaaaatcacataattta 50  Q
    ||||||||||| || |||||||| |||||||| ||||||||||||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataattta 14747597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 14832102 - 14832164
Alignment:
Q  18 acagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||| |||||||||||||||||||||| | ||| ||| ||||| |||| ||||| ||||||    
T  14832102 acagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcgg 14832164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 21257044 - 21256990
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggt 70  Q
    |||||||| |||||||||||||||||||||||| | | ||| ||||| |||||||    
T  21257044 acacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 35222498 - 35222532
Alignment:
Q  25 ataatttgaaaaaatcacataatttaatctaacta 59  Q
    |||||||||||||||||||||||| ||||||||||    
T  35222498 ataatttgaaaaaatcacataattcaatctaacta 35222532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25775494 - 25775567
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaa-aatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| ||||||||  | |||||||||||| |||||||||||| | | ||| ||||| ||||||||||    
T  25775494 gacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 3164083 - 3164051
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||||||||||||||||||||    
T  3164083 acacagctaataatttgaaaaaatcacataatt 3164051  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 11610510 - 11610554
Alignment:
Q  4 actgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||| ||| ||||||| ||||||||||||||||    
T  11610510 actgacacgccaacaccgctaataatttaaaaaaatcacataatt 11610554  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 14979182 - 14979214
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatt 48  Q
    |||||||| ||||||||||||||||||||||||    
T  14979182 acacagctaataatttgaaaaaatcacataatt 14979214  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15796367 - 15796295
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || |||||| | ||||||||||||||||| |||||| | | ||| ||||| ||||||||||    
T  15796367 gacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 27505247 - 27505315
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcggacac 84  Q
    |||||||| |||||||  ||||||||||||||| | | ||| ||||| |||||||||| |||| |||||    
T  27505247 acacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacac 27505315  T

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Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 8784 - 8856
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||||||||| || |||||||| ||||||||||||||||| || ||||| | ||| ||||| ||||||||||    
T  8784 gacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc 8856  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 46668 - 46740
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||| |||||| || |||||| | |||||||||||||||||||||||| | | ||| ||||||||||||||||    
T  46668 gacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc 46740  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 20158 - 20237
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||| |||||| || |||||||| |||||||||||||||||||||||| | | ||| ||||| |||| ||||| ||||||    
T  20158 gacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 20237  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 51797 - 51844
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatt 48  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataatt 51844  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 17807 - 17750
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    ||||| || |||||||||||||||||||||||||| | ||| ||||| ||||||||||    
T  17807 acacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 241580 - 241629
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataattta 50  Q
    ||||||||||| || |||||||| |||||||| |||||||||||||||||    
T  241580 gacactgacacgccgacacagctaataatttggaaaaatcacataattta 241629  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 178892 - 178813
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatca-cataatttaatctaactacaaatgtcggtgtcatgtcg 79  Q
    ||||||||||| || ||||| || ||||||||||||||||| ||||||| | | ||| ||||| |||| |||||||||||    
T  178892 gacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtcatgtcg 178813  T

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Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 8707 - 8629
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtcatgtcgg 80  Q
    |||||||||  || ||||| || |||||||||||| |||||||||||   | ||| |||||||||||||||| ||||||    
T  8707 acactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcgg 8629  T

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Target: scaffold0722 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 7090 - 7033
Alignment:
Q  16 acacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| ||||||||||||||| |||||||||| | ||| ||||| ||| ||||||    
T  7090 acacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtc 7033  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 535 - 463
Alignment:
Q  1 gacactgacacaccaacacagctgataatttgaaaaaatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||| || || |||| ||| ||||||||||||||||||| |||| | | ||| ||||| ||||||||||    
T  535 gacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 463  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 123612 - 123686
Alignment:
Q  2 acactgacacaccaacacagctgataatttgaaaa---aatcacataatttaatctaactacaaatgtcggtgtc 73  Q
    |||||||||| ||||||||||| ||||||| ||||   |||||||||||| | | ||| ||||| ||||||||||    
T  123612 acactgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagtgtcggtgtc 123686  T

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