View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14075_high_7 (Length: 263)
Name: NF14075_high_7
Description: NF14075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14075_high_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 38 - 263
Target Start/End: Complemental strand, 48175961 - 48175725
Alignment:
| Q |
38 |
taaaatatacttttaaatttgaaattactaaaagagtcgtgatttgttgaacaaatctcaactgtctattttatttaattaaagtgtgcgtaattatttg |
137 |
Q |
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| T |
48175961 |
taaaatatacttttgaatttgaaattaccaaaagagtcgtgatttgttgaacaaatctcaactgtctattttgtttaattaaagtgtgcgtaattatttg |
48175862 |
T |
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| Q |
138 |
ttaaattaatagggtgatcttttctcccttac-----------tcggccgtcaacacacaagagagtttaaatgaacaactatgattcatgtttcttgtc |
226 |
Q |
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| T |
48175861 |
ttaaattaatagggtgatcttttctcccttactcgtttttccatcggccgtcaacacacaagagagtttaaatgaacaacggtgattcatgtttcttgtc |
48175762 |
T |
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| Q |
227 |
gctatcacaggtctcaaattctcaattacactactat |
263 |
Q |
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| T |
48175761 |
gctatcacaggtctcaaattctcaattacactactat |
48175725 |
T |
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