View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14075_low_2 (Length: 576)

Name: NF14075_low_2
Description: NF14075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14075_low_2
NF14075_low_2
[»] chr3 (4 HSPs)
chr3 (64-557)||(25914943-25915436)
chr3 (145-557)||(25901006-25901418)
chr3 (415-502)||(12734787-12734874)
chr3 (1-29)||(25914879-25914907)
[»] chr4 (30 HSPs)
chr4 (165-554)||(10571023-10571412)
chr4 (165-519)||(10553293-10553647)
chr4 (410-534)||(8443446-8443570)
chr4 (410-535)||(10482134-10482259)
chr4 (418-539)||(6388189-6388310)
chr4 (410-490)||(837774-837854)
chr4 (145-303)||(10464472-10464630)
chr4 (419-539)||(6392770-6392893)
chr4 (410-539)||(10464218-10464347)
chr4 (410-535)||(10467995-10468120)
chr4 (412-489)||(53774839-53774916)
chr4 (150-226)||(10482452-10482528)
chr4 (410-544)||(10493621-10493755)
chr4 (418-490)||(6372443-6372515)
chr4 (410-534)||(8447646-8447770)
chr4 (414-546)||(10460567-10460699)
chr4 (410-473)||(829589-829652)
chr4 (153-228)||(10475482-10475557)
chr4 (432-539)||(10475156-10475260)
chr4 (148-231)||(829343-829425)
chr4 (164-226)||(10468313-10468375)
chr4 (146-223)||(8437025-8437102)
chr4 (146-223)||(8447379-8447456)
chr4 (416-489)||(11970980-11971053)
chr4 (180-232)||(838005-838057)
chr4 (153-228)||(10484704-10484779)
chr4 (436-489)||(35767017-35767070)
chr4 (416-488)||(3557726-3557798)
chr4 (416-488)||(3565744-3565816)
chr4 (417-489)||(11981682-11981754)
[»] chr2 (9 HSPs)
chr2 (417-539)||(25377023-25377145)
chr2 (420-502)||(18913559-18913641)
chr2 (416-499)||(20975547-20975630)
chr2 (420-490)||(18908811-18908881)
chr2 (420-490)||(18920767-18920837)
chr2 (418-506)||(14514882-14514970)
chr2 (441-519)||(20980573-20980651)
chr2 (428-488)||(20712543-20712603)
chr2 (184-224)||(21021047-21021087)
[»] chr1 (2 HSPs)
chr1 (418-508)||(50645485-50645575)
chr1 (418-488)||(4570927-4570997)
[»] chr5 (3 HSPs)
chr5 (147-288)||(37935285-37935426)
chr5 (431-486)||(23086784-23086839)
chr5 (412-482)||(18964824-18964894)
[»] chr7 (23 HSPs)
chr7 (412-519)||(22063611-22063718)
chr7 (412-519)||(22100462-22100569)
chr7 (415-503)||(19357895-19357983)
chr7 (416-487)||(660845-660916)
chr7 (412-519)||(22070080-22070187)
chr7 (412-519)||(22080837-22080944)
chr7 (434-500)||(22028616-22028682)
chr7 (412-489)||(14076677-14076754)
chr7 (412-489)||(14386705-14386782)
chr7 (434-519)||(15571911-15571996)
chr7 (418-506)||(1985955-1986043)
chr7 (438-554)||(19637237-19637353)
chr7 (181-228)||(19645452-19645499)
chr7 (434-531)||(16846480-16846577)
chr7 (434-535)||(26256728-26256829)
chr7 (418-506)||(20058057-20058145)
chr7 (440-519)||(9807793-9807872)
chr7 (436-486)||(24031257-24031307)
chr7 (434-531)||(16839397-16839494)
chr7 (441-486)||(23999478-23999523)
chr7 (418-506)||(18514787-18514875)
chr7 (420-488)||(29899374-29899442)
chr7 (436-488)||(36260253-36260305)
[»] scaffold0867 (1 HSPs)
scaffold0867 (412-519)||(4663-4770)
[»] chr6 (9 HSPs)
chr6 (416-488)||(20770650-20770722)
chr6 (420-490)||(6954521-6954591)
chr6 (418-531)||(6947880-6947993)
chr6 (441-530)||(19746717-19746806)
chr6 (441-530)||(33576128-33576217)
chr6 (418-490)||(6921350-6921422)
chr6 (412-473)||(17369679-17369740)
chr6 (418-490)||(6935218-6935290)
chr6 (434-490)||(14749395-14749451)
[»] scaffold0464 (1 HSPs)
scaffold0464 (415-502)||(8047-8134)
[»] chr8 (2 HSPs)
chr8 (412-519)||(27618460-27618567)
chr8 (452-508)||(42846459-42846515)
[»] scaffold0097 (1 HSPs)
scaffold0097 (428-488)||(16382-16442)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 64 - 557
Target Start/End: Original strand, 25914943 - 25915436
Alignment:
Q  64 tttgatttcaaacaactgaatcggttaagcaatcccacaatctatttctagtattataaattaaaccaacaaggctgtaaagaagtaacataaattctat 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25914943 tttgatttcaaacaactgaatcggttaagcaatcccacaatctatttctagtattataaattaaaccaacaaggctgtaaagaagtgacataaattctat 25915042  T
Q  164 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaa 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915043 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaa 25915142  T
Q  264 ttggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatgg 363  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915143 ttggctcgcctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatgg 25915242  T
Q  364 caagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaa 463  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25915243 caagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaa 25915342  T
Q  464 tccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacacgtg 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25915343 tccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggctgaacacgtg 25915436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 145 - 557
Target Start/End: Original strand, 25901006 - 25901418
Alignment:
Q  145 gaagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgt 244  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  25901006 gaagtaacataaattctaacaagtaatatgagaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttggcccacaaccactgt 25901105  T
Q  245 actttattagtaatttgaattggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctt 344  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25901106 actttattagtaatttgaattggctcgcctctattttctctgcatttatagataaatgctgcgtcgatttgatcatttgctaatatcaatgcatcacctt 25901205  T
Q  345 tcttagaaaggtacaatggcaagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatcca 444  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25901206 tcttagaaaggtacaatggcaataactccatcgtttcaaatttcaataaatattggcttgaacaaatattctgataactaatttttaacaattgaatcca 25901305  T
Q  445 agactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgtt 544  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25901306 agactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgtt 25901405  T
Q  545 ggatgaacacgtg 557  Q
    || ||||||||||    
T  25901406 ggctgaacacgtg 25901418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 502
Target Start/End: Original strand, 12734787 - 12734874
Alignment:
Q  415 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 502  Q
    |||| |||||||||| |  |||||||||||||| ||||||||||  || |||  |||  |||||| |||||||||| |||||||||||    
T  12734787 ctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccaacatcatccataaaacaaaatgggttcccttgaaa 12734874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 25914879 - 25914907
Alignment:
Q  1 aatactacgtaacagcaatgaaattgaag 29  Q
    |||||||||||||||||||||||||||||    
T  25914879 aatactacgtaacagcaatgaaattgaag 25914907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 165 - 554
Target Start/End: Original strand, 10571023 - 10571412
Alignment:
Q  165 aagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaat 264  Q
    |||||||||||  |||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||  |||    
T  10571023 aagtaatatgaggaagagaaactcactttcatcgagttggaaccaaactttcaacgtaatccttggcccataaccaccatattttattagtaattctaat 10571122  T
Q  265 tggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatggc 364  Q
    | |||| |||||||| |||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||  ||  | |||||||||||||||||||||    
T  10571123 ttgctcgcctctattgtctctgcaattatagataaatgttgtgtcgttttcatcatttgcaaatatcaatgtttccgcattcttagaaaggtacaatggc 10571222  T
Q  365 aagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaat 464  Q
    || ||||||||||||||||||||||||||| ||| |||||||   ||||||| |||||||||||| ||||| |||||||||||||||||||||| |||||    
T  10571223 aataactccatcgtttcaaatttcaataaatattcgcttgaatggaaattctcataactaattttaaacaactgaatccaagactcttgaactccaaaat 10571322  T
Q  465 ccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccacaattgttggatgaacac 554  Q
    |  |||||||||||| ||||| ||| ||||||||||||||||||| ||| |||||  |||  || ||||||||||  ||||| |||||||    
T  10571323 ctgtcattttccataaaacaagatgacttcccttgaaatcatgacaaaagcaaagacagttgattaaaaccacaagcgttggttgaacac 10571412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 165 - 519
Target Start/End: Original strand, 10553293 - 10553647
Alignment:
Q  165 aagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtactttattagtaatttgaat 264  Q
    |||||||||||  |||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||  |||    
T  10553293 aagtaatatgaggaagagaaactcactttcatcgagttggaaccaaactttcaacgtaatccttggcccataaccaccatattttattagtaattctaat 10553392  T
Q  265 tggctcacctctattttctctgcatttatagataaatgctgtgtcgatttgatcatttgctaatatcaatgcatcacctttcttagaaaggtacaatggc 364  Q
    | |||| |||||||| |||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||||  ||  | |||||||||||||||||||||    
T  10553393 ttgctcgcctctattgtctctgcaattatagataaatgttgtgtcgttttcatcatttgcaaatatcaatgtttccgcattcttagaaaggtacaatggc 10553492  T
Q  365 aagaactccatcgtttcaaatttcaataaagattggcttgaacaaaaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaat 464  Q
    || ||||||||||||||||||||||||||| ||| |||||||   ||||||| ||||||||| || | ||| |||||||||||||||||||||| |||||    
T  10553493 aataactccatcgtttcaaatttcaataaatattcgcttgaatggaaattctcataactaatgttaagcaactgaatccaagactcttgaactccaaaat 10553592  T
Q  465 ccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 519  Q
    |  |||||||||||| ||||| ||||||||||||||||||||||| ||| |||||    
T  10553593 ctgtcattttccataaaacaagatggcttcccttgaaatcatgacaaaagcaaag 10553647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 410 - 534
Target Start/End: Original strand, 8443446 - 8443570
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||| | ||| |||||| ||||  ||| ||||||||||| |     
T  8443446 aaattctgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatgagttctcttgaaatcataag 8443545  T
Q  510 caaaacaaagggagtccatcaaaac 534  Q
     |||||||||  |||||||||||||    
T  8443546 aaaaacaaagacagtccatcaaaac 8443570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 410 - 535
Target Start/End: Complemental strand, 10482259 - 10482134
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    |||||||||||| ||||||| || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||   || |||   |||||||||    
T  10482259 aaattctgataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccatataacaaaataagtttcctcataatcatgac 10482160  T
Q  510 caaaacaaagggagtccatcaaaacc 535  Q
    ||||||||||  | ||||||||||||    
T  10482159 caaaacaaagacaatccatcaaaacc 10482134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 418 - 539
Target Start/End: Complemental strand, 6388310 - 6388189
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaa 517  Q
    ||||||||||||||| | ||||||||||||||||||  | | |||||||||||||| |||||||||| ||||  || |||  |||||||||| |||||||    
T  6388310 ataactaatttttaatagttgaatccaagactcttgggcgccaaaatccttcatttgccatataacagaatgagtttcctcaaaatcatgacaaaaacaa 6388211  T
Q  518 agggagtccatcaaaaccacaa 539  Q
    ||  || |||||||||| ||||    
T  6388210 agacagcccatcaaaacaacaa 6388189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 410 - 490
Target Start/End: Complemental strand, 837854 - 837774
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    ||||| ||||| |||||||| || ||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||||    
T  837854 aaattatgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatgg 837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 303
Target Start/End: Complemental strand, 10464630 - 10464472
Alignment:
Q  145 gaagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgt 244  Q
    ||||||| |||||||||| |||||||||||   ||||||||||||||||||||  || ||||| | |||||||||||||||||| ||   ||||||   |    
T  10464630 gaagtaatataaattctaacaagtaatatgtggaagagaaactcactttcaacgtgtcgaaactagactttcaacgtaatccttggcatgcaaccataat 10464531  T
Q  245 actttattagtaatttgaattggctcacctctattttctctgcatttatagataaatgc 303  Q
    ||  || ||||||||  |||| ||||  ||||||| ||| ||| |||||||||||||||    
T  10464530 acagtactagtaattccaattcgctctactctattgtctttgcctttatagataaatgc 10464472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 419 - 539
Target Start/End: Complemental strand, 6392893 - 6392770
Alignment:
Q  419 taactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataa---caaaatggcttcccttgaaatcatgaccaaaac 515  Q
    ||||||||||| || ||||||||||||||||| ||||||| |||||||||||||| |||||| |   |||||||| || |||   | ||| ||| |||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccatatgatgacaaaatgggtttcctcatagtcaagacaaaaac 6392794  T
Q  516 aaagggagtccatcaaaaccacaa 539  Q
    ||||  ||||||||||||||||||    
T  6392793 aaagaaagtccatcaaaaccacaa 6392770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 410 - 539
Target Start/End: Complemental strand, 10464347 - 10464218
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    ||||||| ||||| || |||  ||||||||||||||||||| ||| | | |||||||||||||| |||||||||||||||| |    | |||||||| ||    
T  10464347 aaattcttataaccaactttatacaattgaatccaagactcctgatccccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataac 10464248  T
Q  510 caaaacaaagggagtccatcaaaaccacaa 539  Q
     |||||||||  | ||||||||||||||||    
T  10464247 aaaaacaaagacaatccatcaaaaccacaa 10464218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 410 - 535
Target Start/End: Complemental strand, 10468120 - 10467995
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    ||||||| |||| ||||||| || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||   || |||   |||||||||    
T  10468120 aaattcttataagtaattttaaataattgaatccaagacgactgaactccaaaatccttcatttgccatataacaaaataagtttcctcataatcatgac 10468021  T
Q  510 caaaacaaagggagtccatcaaaacc 535  Q
    | ||||||||  | ||||||||||||    
T  10468020 cgaaacaaagacaatccatcaaaacc 10467995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 53774916 - 53774839
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    |||||||||||||||||| |  |||||| |||||||||||| ||||| ||| |||||||||| |||||||||||||||    
T  53774916 attctgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatg 53774839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 10482528 - 10482452
Alignment:
Q  150 aacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcc 226  Q
    ||||||||||| | |||||||||||   |||||||||||||||||||  ||| ||||||||||||||||||||||||    
T  10482528 aacataaattcaaacaagtaatatgtggaagagaaactcactttcaatgagtcgaaaccaaactttcaacgtaatcc 10482452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 410 - 544
Target Start/End: Complemental strand, 10493755 - 10493621
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    ||||||| ||||| ||||||  | ||||||||||||||||| ||| |||||||||| ||||||||||| || ||||||||| |    | |||||||||||    
T  10493755 aaattcttataaccaattttatataattgaatccaagactcatgatctcgaaaatctttcattttccagattacaaaatgggtattttggaaatcatgac 10493656  T
Q  510 caaaacaaagggagtccatcaaaaccacaattgtt 544  Q
     |||| ||||  | |||||||| ||||||| ||||    
T  10493655 aaaaagaaagacaatccatcaagaccacaagtgtt 10493621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 6372515 - 6372443
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    ||||||||||||  | ||||||||| ||||||||||||||| | |||||||||||| |||||||| |||||||    
T  6372515 ataactaattttatataattgaatctaagactcttgaactccagaatccttcatttgccatataataaaatgg 6372443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 410 - 534
Target Start/End: Original strand, 8447646 - 8447770
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgac 509  Q
    |||||||||||| ||||||| || ||||||||||||||||| |||||||  ||||||||||| | ||| |||| |  |||  ||| |||||||||||       
T  8447646 aaattctgataattaattttaaataattgaatccaagactcatgaactccgaaatccttcatctgccaaataaaatgatgagttctcttgaaatcatatg 8447745  T
Q  510 caaaacaaagggagtccatcaaaac 534  Q
     |||||||||  |||||||||||||    
T  8447746 aaaaacaaagacagtccatcaaaac 8447770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 414 - 546
Target Start/End: Complemental strand, 10460699 - 10460567
Alignment:
Q  414 tctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaa 513  Q
    |||||||||||||  | || |||||| |||| ||||| ||||||| ||||| |||||| |  ||||| ||||||||  ||||||| ||||||| |   ||    
T  10460699 tctgataactaataataaataattgagtccatgactcgtgaactccaaaattcttcatctgtcatatcacaaaatgagttcccttaaaatcataagagaa 10460600  T
Q  514 acaaagggagtccatcaaaaccacaattgttgg 546  Q
    ||||||  |||||||||||||||||| ||||||    
T  10460599 acaaagacagtccatcaaaaccacaagtgttgg 10460567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 410 - 473
Target Start/End: Original strand, 829589 - 829652
Alignment:
Q  410 aaattctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 473  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||| | ||||||||||||||    
T  829589 aaattatgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcattt 829652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 10475557 - 10475482
Alignment:
Q  153 ataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 228  Q
    |||||||| | |||||||||||   ||||||||||||||||||||  || ||||| ||||||||||||||||||||    
T  10475557 ataaattcaaacaagtaatatgtggaagagaaactcactttcaacgtgtcgaaactaaactttcaacgtaatcctt 10475482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 432 - 539
Target Start/End: Complemental strand, 10475260 - 10475156
Alignment:
Q  432 acaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 531  Q
    ||||||||||||||||||| |   ||| |||||||||||||| |||||||||||||||| |    | |||||||| || |||||||||  | ||||||||    
T  10475260 acaattgaatccaagactcct---ctccaaaatccttcatttgccatataacaaaatgggtattttggaaatcataacaaaaacaaagacaatccatcaa 10475164  T
Q  532 aaccacaa 539  Q
    ||||||||    
T  10475163 aaccacaa 10475156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 231
Target Start/End: Original strand, 829343 - 829425
Alignment:
Q  148 gtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagc 231  Q
    ||||||||||||| | ||||| |||||  |||||||||||||||||||   | | |||||||||||||||| ||||||||||||    
T  829343 gtaacataaattcaaacaagtcatatgtgaaagagaaactcactttcatagaatcgaaaccaaactttcaa-gtaatccttagc 829425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 10468375 - 10468313
Alignment:
Q  164 caagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcc 226  Q
    |||||||||||   |||||||||||||||||||  |||  |||||||||||||||||||||||    
T  10468375 caagtaatatgtggaagagaaactcactttcaatgagtcaaaaccaaactttcaacgtaatcc 10468313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 8437025 - 8437102
Alignment:
Q  146 aagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaa 223  Q
    |||||||| |||||| |  ||||||||||   || |||||||||| |||||| ||| |||||||||||||||||||||    
T  8437025 aagtaacaaaaattcaaaaaagtaatatgtggaatagaaactcacattcaacgagtcgaaaccaaactttcaacgtaa 8437102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 8447379 - 8447456
Alignment:
Q  146 aagtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaa 223  Q
    |||||||| |||||  | |||||||||||   || |||||||||| |||||| ||| |||||||||||||||||||||    
T  8447379 aagtaacaaaaattaaaacaagtaatatgtggaatagaaactcacattcaacgagtcgaaaccaaactttcaacgtaa 8447456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 11970980 - 11971053
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    |||||||||||| | |  |||||| ||||||||||||  |||| ||| |||||||||| |||||||||||||||    
T  11970980 tgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaatg 11971053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 838057 - 838005
Alignment:
Q  180 gagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcc 232  Q
    |||||||||| ||||||  | |||||||||||||||||| |||||||||||||    
T  838057 gagaaactcattttcaatgaattgaaaccaaactttcaaagtaatccttagcc 838005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 10484779 - 10484704
Alignment:
Q  153 ataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 228  Q
    |||||||| | |||||||||||   |||||| |||||||||||||  || ||||| | ||||||||||||||||||    
T  10484779 ataaattcaaacaagtaatatgtggaagagacactcactttcaacgtgtcgaaactagactttcaacgtaatcctt 10484704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 489
Target Start/End: Complemental strand, 35767070 - 35767017
Alignment:
Q  436 ttgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    ||||||||||||||||| ||||| ||| || | ||| |||||||||||||||||    
T  35767070 ttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatg 35767017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 3557798 - 3557726
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||||||||||||| |  |||||| |||||||||||| ||| | ||| |||||||| | |||||||| |||||    
T  3557798 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatatgccatataataaaat 3557726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 3565816 - 3565744
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||||||||||||| |  |||||| |||||||||||| ||| | ||| |||||||| | |||||||| |||||    
T  3565816 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 3565744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 489
Target Start/End: Original strand, 11981682 - 11981754
Alignment:
Q  417 gataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    ||||||||||||| |  ||| || |||| |||||||  |||| ||| |||||||||| |||||||||||||||    
T  11981682 gataactaattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatataacaaaatg 11981754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 417 - 539
Target Start/End: Complemental strand, 25377145 - 25377023
Alignment:
Q  417 gataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaaca 516  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||| || |||  |||||||||| ||||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaatggttttcctccaaatcatgacaaaaaca 25377046  T
Q  517 aagggagtccatcaaaaccacaa 539  Q
    |||  ||||| ||||||||||||    
T  25377045 aagacagtccgtcaaaaccacaa 25377023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 420 - 502
Target Start/End: Original strand, 18913559 - 18913641
Alignment:
Q  420 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 502  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| |||||||||||||||||| ||||| |||||    
T  18913559 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggttcccctgaaa 18913641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 499
Target Start/End: Complemental strand, 20975630 - 20975547
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttg 499  Q
    ||||| |||| ||| ||||||||||||||||| |||| ||||| ||| ||| |||||| |||||||||||||||  ||||||||    
T  20975630 tgatacctaaatttaaacaattgaatccaagaatcttcaactccaaattccctcatttgccatataacaaaatgatttcccttg 20975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 490
Target Start/End: Original strand, 18908811 - 18908881
Alignment:
Q  420 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  18908811 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18908881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 490
Target Start/End: Original strand, 18920767 - 18920837
Alignment:
Q  420 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||||||| |  |||||| |||||||||||||||||| ||| ||| |||| ||||||||||||||||||    
T  18920767 aactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgg 18920837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 14514970 - 14514882
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 506  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| || | ||||||||||||||||| |||| ||  |||||||||||    
T  14514970 ataactaattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaagatgggttttcttgaaatcat 14514882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 441 - 519
Target Start/End: Complemental strand, 20980651 - 20980573
Alignment:
Q  441 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 519  Q
    |||||||||||| ||||| ||| ||  |||||||||||||||||||||   |||| ||| ||| ||||| |||||||||    
T  20980651 tccaagactcttcaactctaaattctgtcattttccatataacaaaatcatttccgttggaataatgacaaaaacaaag 20980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 20712543 - 20712603
Alignment:
Q  428 tttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||| ||||| |||||||||||||| ||||  ||| ||| |||| ||||||||||||||||    
T  20712543 tttagcaatttaatccaagactcttcaactgcaaattccctcatcttccatataacaaaat 20712603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 224
Target Start/End: Original strand, 21021047 - 21021087
Alignment:
Q  184 aactcactttcaactagttgaaaccaaactttcaacgtaat 224  Q
    |||| ||||||||| ||||||||||||||||||||| ||||    
T  21021047 aacttactttcaacaagttgaaaccaaactttcaacataat 21021087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 418 - 508
Target Start/End: Original strand, 50645485 - 50645575
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatga 508  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||  ||||||  |||||||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaatgagttccctcaaaatcatga 50645575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 488
Target Start/End: Complemental strand, 4570997 - 4570927
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||||||||||| | ||||||| ||||||| |||| ||| | ||| | |||||||| ||||||||||||||    
T  4570997 ataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaat 4570927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 288
Target Start/End: Complemental strand, 37935426 - 37935285
Alignment:
Q  147 agtaacataaattctatcaagtaatatgaaaaagagaaactcactttcaactagttgaaaccaaactttcaacgtaatccttagcccacaaccaccgtac 246  Q
    |||||||| ||||||| ||||||||||||  |||||| |||||||||||   ||| | |||||||||||||||||||||||| |||| |||||||| |      
T  37935426 agtaacatgaattctagcaagtaatatgaggaagagagactcactttcattgagtcggaaccaaactttcaacgtaatcctttgcccgcaaccaccatgt 37935327  T
Q  247 tttattagtaatttgaattggctcacctctattttctctgca 288  Q
    | |||||||||||  ||||  ||||| | |||| ||||||||    
T  37935326 tctattagtaattctaattttctcacatttattctctctgca 37935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 486
Target Start/End: Complemental strand, 23086839 - 23086784
Alignment:
Q  431 aacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 486  Q
    ||||| ||| |||||||||||||||||| ||| |||||||| | ||||||||||||    
T  23086839 aacaactgagtccaagactcttgaactccaaactccttcatctgccatataacaaa 23086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 18964824 - 18964894
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataa 482  Q
    ||||||||||| |||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||    
T  18964824 attctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 18964894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 4e-18; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 22063718 - 22063611
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    |||||||||||||||||| || || ||| ||||||||||||||| || ||| |||||||||| |||||||||||||||  ||   ||||||||||||  |    
T  22063718 attctgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaatgagtttgtttgaaatcatgaaaa 22063619  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  22063618 aaacaaag 22063611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 22100569 - 22100462
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    |||||||||||||||||| || || ||| |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  22100569 attctgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaa 22100470  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  22100469 aaacaaag 22100462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 503
Target Start/End: Complemental strand, 19357983 - 19357895
Alignment:
Q  415 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaat 503  Q
    |||| ||||||||||||| |||||| |||||||||||||||||| ||| ||| |||| ||||||| ||| |||||| | || |||||||    
T  19357983 ctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccataaaacgaaatgggtccctttgaaat 19357895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 660845 - 660916
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaa 487  Q
    |||||||||||||| |  |||||| |||||||||||| ||||||||| |||||||| | |||||||||||||    
T  660845 tgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 660916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 22070187 - 22070080
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    ||||| |||||||||||| || ||  || |||||||||||||||||| ||| | |||||||| |||||||| ||||||  |||  ||||||||||||  |    
T  22070187 attcttataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagttcgtttgaaatcatgagaa 22070088  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  22070087 aaacaaag 22070080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 22080944 - 22080837
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    |||||||||||||||||| || ||  || |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  22080944 attctgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagtttgtttgaaatcatgagaa 22080845  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  22080844 aaacaaag 22080837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 434 - 500
Target Start/End: Complemental strand, 22028682 - 22028616
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttga 500  Q
    |||||| |||||||||||| ||||| | ||||| ||||||||||||||||||||||| || ||||||    
T  22028682 aattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatgggtttccttga 22028616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 14076754 - 14076677
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||| |||||    
T  14076754 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14076677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 14386782 - 14386705
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatg 489  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||||||||| |||||    
T  14386782 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataacgaaatg 14386705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 434 - 519
Target Start/End: Original strand, 15571911 - 15571996
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 519  Q
    ||||||| ||||||||||| ||||| ||| ||| |||||| ||| || ||||||||| ||||||||||||||| |  |||||||||    
T  15571911 aattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttcccttgaaatcataagaaaaacaaag 15571996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 1985955 - 1986043
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 506  Q
    |||||||||||| ||||||||| ||||||| |||| ||| | ||| |||||||||| ||| | |||||||||| ||  |||||||||||    
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatgggttttcttgaaatcat 1986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 554
Target Start/End: Original strand, 19637237 - 19637353
Alignment:
Q  438 gaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaaccac 537  Q
    ||||||| ||||||||||||| ||| |||||||||| |||||||| |||||   |||| || |||||||||   || ||||||||||||| ||| || ||    
T  19637237 gaatccacgactcttgaactccaaattccttcatttgccatataataaaatcagttccattaaaatcatgagacaagcaaagggagtccagcaacacaac 19637336  T
Q  538 aattgttggatgaacac 554  Q
    ||  ||||| |||||||    
T  19637337 aagagttggttgaacac 19637353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 19645452 - 19645499
Alignment:
Q  181 agaaactcactttcaactagttgaaaccaaactttcaacgtaatcctt 228  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  19645452 agaaacttactttcaacaagttgaaaccaaactttcaacataatcctt 19645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 531
Target Start/End: Original strand, 16846480 - 16846577
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 531  Q
    |||||| |||||||||||||||||| | ||||  |||| ||||||||||||| |||  ||  ||||| | |||||  |||||||||| ||||||||||    
T  16846480 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaagatgagtttgcttgacaacatgagaaaaacaaaggcagtccatcaa 16846577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 434 - 535
Target Start/End: Complemental strand, 26256829 - 26256728
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaaaa 533  Q
    |||||| |||||||||||||||||| | | |||||||| | ||||| ||||||||   || |||||  |||||||  |||||||||| | ||||||||||    
T  26256829 aattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaatcattttccttggtatcatgagaaaaacaaaggcattccatcaaaa 26256730  T
Q  534 cc 535  Q
    ||    
T  26256729 cc 26256728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 20058057 - 20058145
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 506  Q
    |||||||||||| |  ||||||  ||||||||||| |||||  || |||| ||||||||||||||||||||| |||  ||| |||||||    
T  20058057 ataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaatgactttgcttaaaatcat 20058145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 440 - 519
Target Start/End: Complemental strand, 9807872 - 9807793
Alignment:
Q  440 atccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaag 519  Q
    ||||||||||||| ||||| ||| |||||||| | ||||||||| |||| | ||  ||| |||||||||| |||||||||    
T  9807872 atccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttcttcaaatcatgacaaaaacaaag 9807793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 486
Target Start/End: Complemental strand, 24031307 - 24031257
Alignment:
Q  436 ttgaatccaagactcttgaactcgaaaatccttcattttccatataacaaa 486  Q
    |||| |||||||||||||||||| ||| || |||||||||||||| |||||    
T  24031307 ttgagtccaagactcttgaactccaaactcattcattttccatatgacaaa 24031257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 531
Target Start/End: Original strand, 16839397 - 16839494
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatcaa 531  Q
    |||||| |||||||||||||||||| | ||||  |||| ||||||||||||| |||  ||  ||| | | |||||  |||||||||| ||||||||||    
T  16839397 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaagatgagttttcttaacaacatgagaaaaacaaaggcagtccatcaa 16839494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 486
Target Start/End: Original strand, 23999478 - 23999523
Alignment:
Q  441 tccaagactcttgaactcgaaaatccttcattttccatataacaaa 486  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||||    
T  23999478 tccacgacttttgaactccaaactccttcattttccatataacaaa 23999523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 18514787 - 18514875
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcat 506  Q
    |||||||||||| |  |||||| ||||||| | || ||||| ||| || | ||||||||||||||  |||||||||  |||||||||||    
T  18514787 ataactaattttaaggaattgagtccaagagttttcaactccaaattcgtccattttccatataatgaaatggcttttcttgaaatcat 18514875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 488
Target Start/End: Complemental strand, 29899442 - 29899374
Alignment:
Q  420 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    ||||||||||||| |||||| |||| ||||||| ||| | ||| | |||||| | ||||||||||||||    
T  29899442 aactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaaat 29899374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 36260305 - 36260253
Alignment:
Q  436 ttgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    ||||||||||||||||| ||||| ||| || | ||| ||||||||||||||||    
T  36260305 ttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaat 36260253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 412 - 519
Target Start/End: Original strand, 4663 - 4770
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    |||||||||||||||||| || || ||| |||||||||||||||||| ||| | |||||||| |||||||| ||||||  ||   ||||||||||||  |    
T  4663 attctgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaa 4762  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  4763 aaacaaag 4770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 20770722 - 20770650
Alignment:
Q  416 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||||||||||||| |  ||||||||||| ||||||| || || ||| |||||||||| ||||||||||||||    
T  20770722 tgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaat 20770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 490
Target Start/End: Original strand, 6954521 - 6954591
Alignment:
Q  420 aactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||||||| | ||||||| ||||||| |||| ||||| ||| |||||||||| ||| ||||||||||||    
T  6954521 aactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatgg 6954591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 418 - 531
Target Start/End: Original strand, 6947880 - 6947993
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaa 517  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||| | |||||| ||| ||  ||||||||||||   |||||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaa 6947979  T
Q  518 agggagtccatcaa 531  Q
    ||| | ||||||||    
T  6947980 aggcaatccatcaa 6947993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 530
Target Start/End: Original strand, 19746717 - 19746806
Alignment:
Q  441 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatca 530  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||| |   ||||||||||||| ||   ||| |||||| |||||||||    
T  19746717 tccaagactcttgaactccaaacttcttcatttgccatataacaaattcagttcccttgaaatcgtgcgaaaagcaaaggcagtccatca 19746806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 441 - 530
Target Start/End: Complemental strand, 33576217 - 33576128
Alignment:
Q  441 tccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgaccaaaacaaagggagtccatca 530  Q
    |||||||||||||||||| ||| ||||||||  ||||||||||||| |   ||||||| ||||| ||   |||||||||| |||||||||    
T  33576217 tccaagactcttgaactccaaactccttcatcatccatataacaaattcagttcccttaaaatcgtgcgaaaaacaaaggcagtccatca 33576128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 6921350 - 6921422
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||||||||| |  |||||| ||||||| |||| ||||| ||| |||||||||| ||| ||||||||||||    
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatgg 6921422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 473
Target Start/End: Complemental strand, 17369740 - 17369679
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattt 473  Q
    |||||||||||||||||| |  |||||| ||||||| |||| ||||| ||| ||||||||||    
T  17369740 attctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcattt 17369679  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 6935218 - 6935290
Alignment:
Q  418 ataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||||||||| |  |||| | ||||||| |||||||||| ||| |||||||||| ||| |||||| |||||    
T  6935218 ataactaattttaaggaatttagtccaagattcttgaactccaaattccttcatttgccaaataacataatgg 6935290  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 490
Target Start/End: Complemental strand, 14749451 - 14749395
Alignment:
Q  434 aattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatgg 490  Q
    |||||| |||||||||||||||||| ||| ||| ||||  |||||| ||||||||||    
T  14749451 aattgagtccaagactcttgaactccaaattccatcatcctccataaaacaaaatgg 14749395  T

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Target: scaffold0464 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 502
Target Start/End: Complemental strand, 8134 - 8047
Alignment:
Q  415 ctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaa 502  Q
    |||| |||||||||| |  |||||||||||||| ||||||||||  || ||| ||||  |||||| |||||||||| |||||||||||    
T  8134 ctgaaaactaattttgagaaattgaatccaagaatcttgaactccgaattccatcatcatccataaaacaaaatgggttcccttgaaa 8047  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 519
Target Start/End: Complemental strand, 27618567 - 27618460
Alignment:
Q  412 attctgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatgacca 511  Q
    |||||||||||||| ||| | ||| ||| |||||||||||| |||||  |  || | |||||||||||||||||||||  ||  ||| |||||||||| |    
T  27618567 attctgataactaactttaagcaactgagtccaagactcttcaactccgagttcttccattttccatataacaaaatgagtttgcttaaaatcatgacaa 27618468  T
Q  512 aaacaaag 519  Q
    ||||||||    
T  27618467 aaacaaag 27618460  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 452 - 508
Target Start/End: Original strand, 42846459 - 42846515
Alignment:
Q  452 tgaactcgaaaatccttcattttccatataacaaaatggcttcccttgaaatcatga 508  Q
    ||||||| |||||||||||||| ||| |||||||||||| || |||  |||||||||    
T  42846459 tgaactccaaaatccttcatttgccaaataacaaaatgggtttcctcaaaatcatga 42846515  T

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Target: scaffold0097 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 488
Target Start/End: Original strand, 16382 - 16442
Alignment:
Q  428 tttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 488  Q
    |||| ||||| |||||||||||||| ||||  ||| ||| |||| ||||||||||||||||    
T  16382 tttagcaatttaatccaagactcttcaactgcaaattccctcatcttccatataacaaaat 16442  T

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