View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14078_low_1 (Length: 690)

Name: NF14078_low_1
Description: NF14078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14078_low_1
NF14078_low_1
[»] chr1 (53 HSPs)
chr1 (290-422)||(4236794-4236926)
chr1 (146-272)||(4236638-4236764)
chr1 (423-554)||(4237363-4237497)
chr1 (596-682)||(4237494-4237580)
chr1 (1-136)||(47955529-47955664)
chr1 (7-136)||(31848121-31848248)
chr1 (1-136)||(8108719-8108853)
chr1 (1-136)||(17518301-17518435)
chr1 (290-373)||(49146891-49146973)
chr1 (1-135)||(22149402-22149533)
chr1 (1-136)||(41083131-41083266)
chr1 (44-135)||(47955305-47955396)
chr1 (2-66)||(1176934-1176998)
chr1 (80-135)||(8108993-8109048)
chr1 (80-135)||(39692000-39692055)
chr1 (77-135)||(13589656-13589713)
chr1 (82-131)||(22149701-22149750)
chr1 (77-134)||(41082909-41082966)
chr1 (80-135)||(49284408-49284463)
chr1 (77-131)||(1176839-1176893)
chr1 (80-134)||(6002237-6002291)
chr1 (80-134)||(48190771-48190825)
chr1 (80-136)||(26815119-26815175)
chr1 (80-136)||(28634157-28634213)
chr1 (80-136)||(32163043-32163099)
chr1 (80-136)||(44911023-44911079)
chr1 (80-136)||(48191355-48191411)
chr1 (77-132)||(17518599-17518653)
chr1 (80-135)||(33085670-33085725)
chr1 (1-67)||(46057115-46057182)
chr1 (80-135)||(48313792-48313847)
chr1 (78-136)||(1177016-1177074)
chr1 (80-134)||(9347126-9347180)
chr1 (80-134)||(26814694-26814748)
chr1 (85-135)||(50615239-50615289)
chr1 (85-135)||(50623067-50623117)
chr1 (82-135)||(50429655-50429708)
chr1 (80-136)||(19008750-19008806)
chr1 (80-135)||(20480167-20480221)
chr1 (80-131)||(48104681-48104732)
chr1 (80-131)||(50430081-50430132)
chr1 (84-134)||(1176717-1176766)
chr1 (80-134)||(21687025-21687079)
chr1 (80-134)||(48105116-48105170)
chr1 (80-134)||(50615621-50615674)
chr1 (80-134)||(50623449-50623502)
chr1 (82-131)||(42611616-42611665)
chr1 (80-132)||(6002894-6002946)
chr1 (80-136)||(28633718-28633774)
chr1 (82-133)||(46056904-46056953)
chr1 (83-131)||(46823846-46823894)
chr1 (80-132)||(50526472-50526524)
chr1 (84-136)||(50949569-50949621)
[»] chr5 (41 HSPs)
chr5 (1-135)||(18433238-18433371)
chr5 (1-136)||(25175072-25175207)
chr5 (1-136)||(25115980-25116117)
chr5 (1-134)||(34577086-34577217)
chr5 (4-136)||(22428932-22429061)
chr5 (1-108)||(26020672-26020780)
chr5 (44-134)||(18433015-18433105)
chr5 (1-62)||(12441084-12441145)
chr5 (80-135)||(26020449-26020504)
chr5 (78-136)||(5187828-5187886)
chr5 (1-63)||(5779632-5779694)
chr5 (78-136)||(25115755-25115813)
chr5 (78-136)||(25174847-25174905)
chr5 (84-136)||(16466746-16466798)
chr5 (82-134)||(37780744-37780796)
chr5 (81-121)||(41382905-41382945)
chr5 (80-135)||(19514963-19515018)
chr5 (77-136)||(33324835-33324894)
chr5 (1-67)||(9665749-9665815)
chr5 (80-134)||(18817611-18817665)
chr5 (80-136)||(12498565-12498621)
chr5 (80-136)||(12498928-12498984)
chr5 (80-136)||(18816950-18817006)
chr5 (80-136)||(22429196-22429251)
chr5 (80-136)||(26570727-26570783)
chr5 (80-136)||(26571164-26571220)
chr5 (80-135)||(41383167-41383221)
chr5 (82-136)||(31569905-31569958)
chr5 (82-135)||(34147512-34147565)
chr5 (80-136)||(11351427-11351483)
chr5 (1-134)||(23011079-23011213)
chr5 (80-120)||(34576880-34576920)
chr5 (82-134)||(37610620-37610671)
chr5 (80-135)||(5187550-5187605)
chr5 (1-131)||(9869563-9869691)
chr5 (77-128)||(16726084-16726135)
chr5 (80-131)||(21207229-21207280)
chr5 (81-111)||(23011383-23011413)
chr5 (82-136)||(43464194-43464247)
chr5 (84-133)||(25941018-25941067)
chr5 (80-131)||(9665560-9665609)
[»] chr8 (56 HSPs)
chr8 (1-136)||(15155881-15156016)
chr8 (1-134)||(37752338-37752470)
chr8 (1-134)||(12281347-12281480)
chr8 (1-134)||(16929164-16929296)
chr8 (1-135)||(43246096-43246231)
chr8 (1-134)||(43162234-43162368)
chr8 (1-114)||(9465795-9465908)
chr8 (1-134)||(34313765-34313895)
chr8 (1-136)||(33747982-33748116)
chr8 (1-101)||(765956-766054)
chr8 (8-135)||(18020017-18020141)
chr8 (25-135)||(41662106-41662216)
chr8 (77-134)||(15156182-15156239)
chr8 (1-116)||(7127670-7127782)
chr8 (77-136)||(16928940-16928999)
chr8 (5-131)||(37669958-37670082)
chr8 (44-134)||(41662367-41662457)
chr8 (44-134)||(43245871-43245961)
chr8 (44-132)||(765736-765824)
chr8 (1-132)||(74688-74816)
chr8 (44-135)||(12281123-12281214)
chr8 (1-120)||(9930759-9930879)
chr8 (1-67)||(22787033-22787099)
chr8 (80-134)||(22851390-22851444)
chr8 (1-134)||(23123338-23123473)
chr8 (80-134)||(37752084-37752138)
chr8 (80-136)||(13937389-13937445)
chr8 (44-134)||(3463909-3463999)
chr8 (80-135)||(9823361-9823416)
chr8 (80-134)||(9822748-9822802)
chr8 (82-136)||(13026633-13026687)
chr8 (80-134)||(39724048-39724102)
chr8 (80-136)||(34498555-34498611)
chr8 (80-131)||(13027281-13027332)
chr8 (16-63)||(43598688-43598735)
chr8 (84-134)||(3307338-3307388)
chr8 (4-66)||(3463707-3463769)
chr8 (80-136)||(3463640-3463694)
chr8 (2-66)||(11007750-11007814)
chr8 (77-130)||(43162536-43162588)
chr8 (80-136)||(2856524-2856580)
chr8 (77-132)||(23123514-23123567)
chr8 (80-132)||(25438794-25438846)
chr8 (80-136)||(37396706-37396762)
chr8 (77-112)||(74981-75016)
chr8 (80-135)||(13936722-13936776)
chr8 (82-133)||(22851958-22852009)
chr8 (80-131)||(34498125-34498176)
chr8 (94-136)||(767720-767761)
chr8 (82-136)||(22786838-22786892)
chr8 (80-134)||(37397145-37397199)
chr8 (81-115)||(43598756-43598790)
chr8 (82-135)||(17431286-17431339)
chr8 (77-129)||(18019915-18019968)
chr8 (82-135)||(41662520-41662573)
chr8 (84-116)||(6092793-6092825)
[»] chr6 (33 HSPs)
chr6 (1-135)||(18241853-18241987)
chr6 (4-134)||(11656706-11656836)
chr6 (1-115)||(33972012-33972125)
chr6 (1-136)||(21032200-21032336)
chr6 (5-134)||(30388062-30388189)
chr6 (7-136)||(10039674-10039801)
chr6 (44-136)||(3403953-3404045)
chr6 (1-65)||(3403757-3403821)
chr6 (1-135)||(23250591-23250724)
chr6 (7-116)||(31598476-31598583)
chr6 (1-66)||(33658661-33658726)
chr6 (80-134)||(3403717-3403771)
chr6 (78-136)||(30388360-30388418)
chr6 (7-63)||(31598043-31598099)
chr6 (77-129)||(12714436-12714488)
chr6 (44-135)||(21031978-21032068)
chr6 (80-136)||(33829636-33829692)
chr6 (80-135)||(7654548-7654603)
chr6 (80-134)||(33828990-33829044)
chr6 (77-136)||(13579648-13579706)
chr6 (84-131)||(31598732-31598778)
chr6 (77-131)||(3825530-3825583)
chr6 (81-135)||(31598274-31598327)
chr6 (77-129)||(2762611-2762664)
chr6 (77-129)||(10039840-10039893)
chr6 (78-129)||(11656608-11656660)
chr6 (44-114)||(18242120-18242190)
chr6 (77-123)||(21032111-21032158)
chr6 (80-134)||(10087858-10087912)
chr6 (80-134)||(33974299-33974353)
chr6 (81-129)||(18242033-18242082)
chr6 (77-117)||(2762500-2762540)
chr6 (79-135)||(33655114-33655169)
[»] chr3 (45 HSPs)
chr3 (1-134)||(10293830-10293963)
chr3 (1-135)||(20968717-20968851)
chr3 (1-134)||(18875112-18875245)
chr3 (2-134)||(17372298-17372429)
chr3 (1-116)||(26540790-26540905)
chr3 (1-67)||(13657513-13657579)
chr3 (1-67)||(45060662-45060728)
chr3 (1-63)||(9026955-9027017)
chr3 (1-67)||(3644599-3644665)
chr3 (80-134)||(20969019-20969073)
chr3 (9-67)||(47870887-47870945)
chr3 (1-62)||(1100983-1101044)
chr3 (7-135)||(17440990-17441118)
chr3 (79-135)||(47871121-47871176)
chr3 (44-134)||(10293608-10293698)
chr3 (81-136)||(18874880-18874935)
chr3 (1-134)||(42627467-42627599)
chr3 (81-136)||(45060872-45060927)
chr3 (80-135)||(53687887-53687942)
chr3 (80-134)||(3644783-3644837)
chr3 (81-130)||(4947263-4947312)
chr3 (81-134)||(8314013-8314066)
chr3 (1-136)||(14015692-14015827)
chr3 (80-136)||(36180990-36181046)
chr3 (80-136)||(48159895-48159951)
chr3 (81-136)||(8315083-8315137)
chr3 (81-136)||(27238463-27238518)
chr3 (85-136)||(42455788-42455839)
chr3 (81-134)||(1927772-1927825)
chr3 (80-136)||(40848961-40849017)
chr3 (81-136)||(1101182-1101237)
chr3 (20-67)||(4947499-4947545)
chr3 (80-131)||(23630035-23630086)
chr3 (80-135)||(26007181-26007235)
chr3 (80-134)||(3353128-3353181)
chr3 (80-134)||(42673296-42673349)
chr3 (82-136)||(47665909-47665963)
chr3 (80-134)||(47666335-47666389)
chr3 (80-134)||(48160333-48160387)
chr3 (81-135)||(53766580-53766634)
chr3 (80-121)||(1928434-1928475)
chr3 (80-113)||(9026756-9026789)
chr3 (81-129)||(10293735-10293784)
chr3 (80-113)||(14015964-14015997)
chr3 (82-129)||(18875017-18875065)
[»] chr2 (51 HSPs)
chr2 (1-134)||(11883847-11883980)
chr2 (1-134)||(40469427-40469560)
chr2 (1-134)||(30191146-30191279)
chr2 (1-136)||(20347161-20347295)
chr2 (1-134)||(32672842-32672975)
chr2 (6-135)||(26737481-26737607)
chr2 (1-134)||(6171156-6171288)
chr2 (1-136)||(17345956-17346090)
chr2 (21-123)||(15920789-15920890)
chr2 (77-135)||(11883622-11883680)
chr2 (1-67)||(15321610-15321676)
chr2 (2-135)||(43495308-43495439)
chr2 (44-136)||(30190921-30191013)
chr2 (44-135)||(24832330-24832421)
chr2 (77-135)||(20347461-20347519)
chr2 (44-131)||(40469693-40469780)
chr2 (11-135)||(6495653-6495776)
chr2 (80-133)||(18296077-18296130)
chr2 (80-136)||(2639482-2639538)
chr2 (80-136)||(26841585-26841641)
chr2 (80-135)||(6171456-6171511)
chr2 (80-131)||(7591204-7591255)
chr2 (80-135)||(8851582-8851637)
chr2 (80-135)||(18296693-18296748)
chr2 (80-134)||(26737781-26737835)
chr2 (1-65)||(18055265-18055330)
chr2 (80-136)||(5378659-5378715)
chr2 (81-133)||(6495468-6495519)
chr2 (80-136)||(7664246-7664302)
chr2 (7-62)||(40221382-40221438)
chr2 (80-136)||(41790912-41790968)
chr2 (80-135)||(2638819-2638874)
chr2 (80-135)||(37720203-37720258)
chr2 (80-134)||(7664673-7664727)
chr2 (80-134)||(17850978-17851032)
chr2 (80-134)||(26842238-26842292)
chr2 (82-136)||(29230280-29230334)
chr2 (80-136)||(5379959-5380015)
chr2 (80-131)||(8851151-8851202)
chr2 (78-132)||(15321394-15321446)
chr2 (77-132)||(18055050-18055103)
chr2 (80-131)||(18055316-18055367)
chr2 (77-131)||(43495481-43495535)
chr2 (80-134)||(7591850-7591904)
chr2 (81-129)||(6171334-6171383)
chr2 (77-129)||(17345859-17345912)
chr2 (81-129)||(26737657-26737706)
chr2 (82-131)||(29343584-29343633)
chr2 (78-115)||(32673141-32673178)
chr2 (77-134)||(43495602-43495658)
chr2 (82-129)||(40469607-40469655)
[»] scaffold0802 (2 HSPs)
scaffold0802 (7-134)||(1118-1245)
scaffold0802 (44-134)||(1384-1474)
[»] chr4 (61 HSPs)
chr4 (1-136)||(16555513-16555648)
chr4 (1-135)||(13198827-13198961)
chr4 (1-134)||(11241389-11241521)
chr4 (1-134)||(3930179-3930311)
chr4 (1-114)||(39415244-39415357)
chr4 (1-130)||(49178736-49178866)
chr4 (1-135)||(35393698-35393830)
chr4 (1-133)||(8488404-8488534)
chr4 (1-115)||(27304735-27304849)
chr4 (1-136)||(22681802-22681935)
chr4 (8-67)||(3844411-3844470)
chr4 (2-135)||(8182092-8182228)
chr4 (1-65)||(5206028-5206092)
chr4 (80-136)||(56505691-56505747)
chr4 (77-136)||(3930477-3930535)
chr4 (44-134)||(16555781-16555871)
chr4 (80-135)||(24775783-24775838)
chr4 (77-135)||(18077199-18077257)
chr4 (1-62)||(7603186-7603247)
chr4 (80-136)||(5205986-5206042)
chr4 (77-133)||(22681576-22681631)
chr4 (80-136)||(39744465-39744521)
chr4 (80-136)||(50678777-50678833)
chr4 (16-135)||(54508814-54508933)
chr4 (80-135)||(9023680-9023735)
chr4 (11-65)||(24775742-24775797)
chr4 (81-134)||(5206231-5206283)
chr4 (80-136)||(11241661-11241716)
chr4 (80-136)||(28196344-28196400)
chr4 (44-135)||(36095816-36095907)
chr4 (80-136)||(45830196-45830252)
chr4 (80-135)||(293217-293272)
chr4 (80-135)||(28196773-28196828)
chr4 (80-131)||(36096475-36096526)
chr4 (80-134)||(169439-169493)
chr4 (80-134)||(32703650-32703704)
chr4 (80-134)||(50679424-50679478)
chr4 (77-133)||(7603146-7603200)
chr4 (77-133)||(8181992-8182049)
chr4 (83-136)||(9380744-9380797)
chr4 (81-134)||(23540253-23540306)
chr4 (80-133)||(25161879-25161932)
chr4 (77-129)||(27304890-27304943)
chr4 (80-136)||(9023242-9023298)
chr4 (80-135)||(8488187-8488242)
chr4 (80-135)||(26207746-26207801)
chr4 (80-135)||(32703224-32703279)
chr4 (80-135)||(43051252-43051307)
chr4 (80-134)||(4239366-4239420)
chr4 (77-131)||(8181873-8181927)
chr4 (80-134)||(9380307-9380361)
chr4 (77-131)||(13198606-13198660)
chr4 (81-135)||(45828993-45829047)
chr4 (82-136)||(47219203-47219257)
chr4 (80-133)||(11529169-11529222)
chr4 (80-133)||(43292038-43292091)
chr4 (80-135)||(169012-169068)
chr4 (84-136)||(292780-292832)
chr4 (82-129)||(16555695-16555743)
chr4 (87-135)||(39912053-39912101)
chr4 (81-121)||(54509116-54509156)
[»] scaffold0319 (2 HSPs)
scaffold0319 (1-135)||(6393-6528)
scaffold0319 (44-134)||(6661-6750)
[»] chr7 (62 HSPs)
chr7 (1-135)||(9412022-9412156)
chr7 (1-134)||(3687353-3687488)
chr7 (1-136)||(6908211-6908345)
chr7 (1-132)||(29291808-29291939)
chr7 (7-136)||(23686646-23686773)
chr7 (2-131)||(27096264-27096392)
chr7 (2-131)||(27181911-27182039)
chr7 (7-108)||(5349489-5349587)
chr7 (1-63)||(13772683-13772745)
chr7 (7-134)||(38191488-38191619)
chr7 (44-136)||(9412289-9412381)
chr7 (7-67)||(15567056-15567116)
chr7 (77-134)||(3687653-3687710)
chr7 (77-134)||(13772898-13772955)
chr7 (7-62)||(18925128-18925183)
chr7 (77-133)||(8953886-8953941)
chr7 (80-136)||(13772639-13772695)
chr7 (80-135)||(3205093-3205148)
chr7 (80-135)||(17156966-17157021)
chr7 (80-135)||(20419324-20419379)
chr7 (80-135)||(22740155-22740210)
chr7 (80-135)||(44600135-44600190)
chr7 (80-134)||(44599489-44599543)
chr7 (1-65)||(33628609-33628674)
chr7 (79-132)||(34235977-34236030)
chr7 (80-134)||(5349733-5349784)
chr7 (80-136)||(10533032-10533088)
chr7 (80-136)||(13863311-13863367)
chr7 (80-136)||(37889259-37889315)
chr7 (80-131)||(18863970-18864021)
chr7 (80-135)||(37972396-37972451)
chr7 (83-133)||(5735253-5735303)
chr7 (80-134)||(9035293-9035347)
chr7 (7-61)||(35080023-35080076)
chr7 (80-134)||(37888833-37888887)
chr7 (79-133)||(39983700-39983754)
chr7 (86-131)||(5735553-5735598)
chr7 (79-136)||(9034865-9034922)
chr7 (82-135)||(38826915-38826968)
chr7 (80-136)||(8643766-8643822)
chr7 (82-134)||(18925062-18925114)
chr7 (80-136)||(20418886-20418942)
chr7 (80-136)||(33628660-33628716)
chr7 (2-50)||(34235762-34235810)
chr7 (80-116)||(35080223-35080259)
chr7 (7-66)||(5735474-5735533)
chr7 (81-120)||(6908485-6908524)
chr7 (80-135)||(13744233-13744287)
chr7 (88-135)||(13863964-13864011)
chr7 (84-135)||(29292921-29292972)
chr7 (82-136)||(18864404-18864457)
chr7 (80-134)||(48359320-48359373)
chr7 (81-134)||(23686421-23686473)
chr7 (77-134)||(29292038-29292095)
chr7 (81-134)||(35079960-35080012)
chr7 (82-131)||(40017447-40017495)
chr7 (86-135)||(42418590-42418639)
chr7 (82-136)||(15567276-15567327)
chr7 (86-134)||(27096047-27096094)
chr7 (86-134)||(27182209-27182256)
chr7 (80-136)||(37971958-37972014)
chr7 (80-136)||(46816311-46816367)
[»] scaffold0110 (2 HSPs)
scaffold0110 (1-135)||(45536-45669)
scaffold0110 (44-136)||(45771-45862)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-136)||(439122-439255)
scaffold0001 (2-131)||(183367-183495)
scaffold0001 (45-134)||(438930-439019)
scaffold0001 (77-135)||(183660-183717)
[»] scaffold0015 (2 HSPs)
scaffold0015 (1-134)||(17076-17209)
scaffold0015 (77-115)||(16870-16908)
[»] scaffold0192 (2 HSPs)
scaffold0192 (1-67)||(25134-25200)
scaffold0192 (44-135)||(25333-25424)
[»] scaffold1221 (1 HSPs)
scaffold1221 (1-131)||(1704-1834)
[»] scaffold0598 (1 HSPs)
scaffold0598 (7-132)||(6609-6731)
[»] scaffold0433 (1 HSPs)
scaffold0433 (8-67)||(10690-10749)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-135)||(205686-205817)
[»] scaffold0376 (3 HSPs)
scaffold0376 (7-65)||(7494-7552)
scaffold0376 (77-134)||(7597-7653)
scaffold0376 (80-135)||(7454-7508)
[»] scaffold0002 (1 HSPs)
scaffold0002 (77-134)||(411923-411979)
[»] scaffold0460 (1 HSPs)
scaffold0460 (84-135)||(329-380)
[»] scaffold0328 (2 HSPs)
scaffold0328 (80-134)||(6152-6206)
scaffold0328 (80-134)||(6795-6849)
[»] scaffold0176 (1 HSPs)
scaffold0176 (80-136)||(20043-20099)
[»] scaffold0535 (1 HSPs)
scaffold0535 (84-135)||(10011-10062)
[»] scaffold0041 (1 HSPs)
scaffold0041 (80-135)||(38695-38750)
[»] scaffold0017 (1 HSPs)
scaffold0017 (80-134)||(185274-185328)
[»] scaffold0029 (1 HSPs)
scaffold0029 (79-135)||(9904-9960)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 8e-69; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 290 - 422
Target Start/End: Original strand, 4236794 - 4236926
Alignment:
Q  290 caactaaactgaattttaatagtgaatgtatttaagatcattcttatttatgtaaagaaatctaaagtggatctcaaattattattaatttttggttatt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4236794 caactaaactgaattttaatagtgaatgtatttaagatcattcttatttatgtaaagaaatctaaagtggatctcaaattattattaatttttggttatt 4236893  T
Q  390 tgtcgaagaaattagttttattatcaggattaa 422  Q
    |||||||||||||||||||||||||||||||||    
T  4236894 tgtcgaagaaattagttttattatcaggattaa 4236926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 146 - 272
Target Start/End: Original strand, 4236638 - 4236764
Alignment:
Q  146 gttgaataaatagtttttcattatattttgaaaccttttaacattatataaaacaataaagtttttacaaattttctccagttgaagagtcaaagaatca 245  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4236638 gttgaataaatagtttttcattatattttgaaaccctttaacattatataaaacaataaagcttttacaaattttctccagttgaagagtcaaagaatca 4236737  T
Q  246 catcttatatagagtacatgcactgcg 272  Q
    |||||||||||||||||||||||||||    
T  4236738 catcttatatagagtacatgcactgcg 4236764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 4237363 - 4237497
Alignment:
Q  423 aataacctattaaagggctcaactcttccaatccttagccaaaattttcacatccacatttgaattgtctccctcaacctgaga---ttcctagagcatc 519  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||    
T  4237363 aataacctattaaagggctcaactcttccaatccttagccaaaattttcacattcacatttgaattgtctccctcaacctgagaggcttcctagagcatc 4237462  T
Q  520 gagtacaccgaactaacggagtaaaatccattggt 554  Q
    ||||||||||||||||  |||||||||||||||||    
T  4237463 gagtacaccgaactaattgagtaaaatccattggt 4237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 4237494 - 4237580
Alignment:
Q  596 tggtcccattcagaattgtgaccaacaaacaaacctctcatccacttaaggtcccaaacccacacatccccaccccaagggcctatg 682  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4237494 tggtcccattcagaattgtgaccaacaaacaaacctctcatccacttaaggtcccaaacccacacatccccaccccaagggcctatg 4237580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 47955529 - 47955664
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  47955529 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 47955628  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    || |||||||||||||||||||| ||||||||||||    
T  47955629 aataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 31848121 - 31848248
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||| ||||||||||||    
T  31848121 ctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc--gaaaaaagagggggtgcaaaatcgtacaattaacaaa 31848218  T
Q  107 agataggggggaaaagtacaattaagccta 136  Q
    ||||||||| ||||||| ||||||||||||    
T  31848219 agataggggagaaaagtgcaattaagccta 31848248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 8108853 - 8108719
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||          |||||||||||||||||||||||    
T  8108853 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaa-agggggtgcaaaatcgcacaatt 8108755  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||| |||||||| ||||||| ||||    
T  8108754 aacaaaagatagggaggaaaagtgcaattaaaccta 8108719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 17518435 - 17518301
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  17518435 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 17518336  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||  ||||||| || ||||||||||||    
T  17518335 aacaaaagata-aggggaaaggtgcaattaagccta 17518301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 290 - 373
Target Start/End: Original strand, 49146891 - 49146973
Alignment:
Q  290 caactaaactgaattttaatagtgaatgtatttaagatcattcttatttatgtaaagaaatctaaagtggatctcaaattatta 373  Q
    ||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49146891 caactaaactgaattttaagaatgaatgtatttaa-atcattcttatttatgtaaagaaatctaaagtggatctcaaattatta 49146973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22149533 - 22149402
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||    
T  22149533 tttcctctcttttaatgatgattttgaacaaagcacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaatt 22149435  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
     || ||||||| ||||||||||| |||||||||||    
T  22149434 -accaaagata-gggggaaaagtgcaattaagcct 22149402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 41083131 - 41083266
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct-cnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    |||||||||||||| |||||||||||||||||||||| ||| ||||| || |||||||||||||||           ||||||||||||||||||||||     
T  41083131 tttcctctcttttaatgatgattttgaacaaaacacagttggcaaaatattgggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaac 41083230  T
Q  100 taacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  41083231 taacaaaagata-gggggaaaagtgcaattaagccta 41083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 47955396 - 47955305
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  47955396 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1176934 - 1176998
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct 66  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  1176934 ttcccctcttttaataatgattttgaacaaaacacaattgacaaaagatggggtgcgaaatcgct 1176998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 8108993 - 8109048
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  8108993 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 39692000 - 39692055
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||    
T  39692000 ggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 13589656 - 13589713
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  13589656 gagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 22149701 - 22149750
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 41082966 - 41082909
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||| |||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  41082966 gaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 49284463 - 49284408
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  49284463 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 1176893 - 1176839
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||| |||||||    
T  1176893 gagggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 6002291 - 6002237
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||| ||||||||||    
T  6002291 ggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 48190825 - 48190771
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  48190825 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 26815119 - 26815175
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| | |||  ||||||||||||||| ||||||||||||    
T  26815119 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 28634157 - 28634213
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| ||||||| ||||    
T  28634157 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaaccta 28634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 32163043 - 32163099
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  32163043 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 44911079 - 44911023
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||| ||||||||||||    
T  44911079 ggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagccta 44911023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 48191355 - 48191411
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||| ||||||||||||    
T  48191355 ggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 17518599 - 17518653
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||    
T  17518599 gagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 33085725 - 33085670
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||  |||||| |||||| |||||| ||||||||||||||||||||    
T  33085725 ggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaagcct 33085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 46057115 - 46057182
Alignment:
Q  1 tttcctctcttttattgatgattttgaac-aaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| |||||||||||||| |||||||||||| ||||||| |||||| |||| |||||    
T  46057115 tttcccctcttttaatgatgattttgaactaaaacacaattggcaaaagaaagggtgtaaaaccgctc 46057182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 48313792 - 48313847
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||| ||||||||| |||||||||  ||| ||||||||||||||||||    
T  48313792 ggggtgcaaaattgcacaattagcaaaagataatgggaaaaagtacaattaagcct 48313847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 1177016 - 1177074
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||| ||||||| ||||    
T  1177016 agggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaaccta 1177074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 9347180 - 9347126
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  9347180 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 26814748 - 26814694
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  |||||| |||||||| ||||||||||    
T  26814748 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 50615289 - 50615239
Alignment:
Q  85 gcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50615239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 135
Target Start/End: Complemental strand, 50623117 - 50623067
Alignment:
Q  85 gcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 50623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 50429708 - 50429655
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||| ||||  |||  ||||||||||||||||||||||    
T  50429708 ggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 19008750 - 19008806
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||   |||  ||||||||||||||| ||||||||||||    
T  19008750 ggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagccta 19008806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 20480221 - 20480167
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| |||||||||||    
T  20480221 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 48104732 - 48104681
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  48104732 ggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 50430081 - 50430132
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  50430081 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatatagggggg-aaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 21687079 - 21687025
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||  ||||||| |||||  ||||||||||||||| ||||||||||    
T  21687079 ggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 48105116 - 48105170
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||| ||||||||||| ||||||||||    
T  48105116 ggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 50615621 - 50615674
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  50615621 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 50623449 - 50623502
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  50623449 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 42611616 - 42611665
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||| |||||  ||||||| ||||||| |||||||    
T  42611616 ggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 6002894 - 6002946
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    |||||||||||||||||||||   |||||||||||  ||||||| ||||||||    
T  6002894 ggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 28633774 - 28633718
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||| ||||||  ||||  ||| ||||||||||| ||||||||||||    
T  28633774 ggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 46056953 - 46056904
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||||| ||||| ||||||||||||||  ||||| |||||||||    
T  46056953 ggtgcaaaatcgcaaaattagcaaaagataggggg--aaagtgcaattaagc 46056904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Complemental strand, 46823894 - 46823846
Alignment:
Q  83 gtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  46823894 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 50526472 - 50526524
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    |||||||||||||||||||||  ||||  |||||||| |||||| ||||||||    
T  50526472 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 50949569 - 50949621
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||| |||||  ||||||||| ||||| |||||| |||||    
T  50949569 tgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgccta 50949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 1e-43; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 18433238 - 18433371
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||    
T  18433238 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaatt 18433336  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||| |||||||||||    
T  18433337 aacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 25175072 - 25175207
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  25175072 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 25175171  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||| ||||||||||||    
T  25175172 aacaaaagataggggggaaaagtgcaattaagccta 25175207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 25115980 - 25116117
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnnga--gggggtgcaaaatcgcacaa 98  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||  ||||||||||||||||||||    
T  25115980 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagaaggggggtgcaaaatcgcacaa 25116079  T
Q  99 ttaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25116080 ttaacaaaagataggggggaaaagtgcaattaagccta 25116117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34577086 - 34577217
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||         || ||||||||||||| |||||||    
T  34577086 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagatggggtgcaaaatcacacaatt 34577184  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    | ||||||||| |||| |||||| ||||||||||    
T  34577185 agcaaaagata-ggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 4 - 136
Target Start/End: Complemental strand, 22429061 - 22428932
Alignment:
Q  4 cctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaac 103  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| ||||         || |||||||||||||||||||||| |    
T  22429061 cctctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaattgctc--aaaaaaagatggggtgcaaaatcgcacaattagc 22428964  T
Q  104 aaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||| ||||| ||||||||||||    
T  22428963 aaaagatagggggg-aaagtgcaattaagccta 22428932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26020672 - 26020780
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||          ||| |||||||||||||||||||    
T  26020672 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatgagttgcaaaatcgctcaaaaaaaaaagagagggtgcaaaatcgcacaat 26020771  T
Q  100 taacaaaag 108  Q
    |||||||||    
T  26020772 taacaaaag 26020780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 18433105 - 18433015
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  18433105 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12441145 - 12441084
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaat 62  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  12441145 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatgaggtgcaaaat 12441084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 26020504 - 26020449
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  26020504 ggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 5187828 - 5187886
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||    
T  5187828 agggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagccta 5187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 5779694 - 5779632
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatc 63  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||  |||||||||||    
T  5779694 tttcccctcttttaatgatgattttgaacaaaacacaattgtcaaaagatgaggtgcaaaatc 5779632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 25115813 - 25115755
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  25115813 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 25174905 - 25174847
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||    
T  25174905 agggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 16466746 - 16466798
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagccta 16466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 37780744 - 37780796
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 41382945 - 41382905
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa 121  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa 41382905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 19514963 - 19515018
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  19514963 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 33324835 - 33324894
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||| ||||||| ||||||||||||||  |||||| ||||||||||||    
T  33324835 gagggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9665749 - 9665815
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| |  ||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  9665749 tttcccctcttttaatattgattttgaacaaaacacaatttgcaaaagatggggtgcaaaatcgctc 9665815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 18817611 - 18817665
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  18817611 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 12498621 - 12498565
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  12498621 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 12498928 - 12498984
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  12498928 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 12498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 18817006 - 18816950
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||| | ||||||||||||    
T  18817006 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 18816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 22429196 - 22429251
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  22429196 ggggtgcaaaatcgcacaattagcaaaagata-gggggaaaaatgcaattaagccta 22429251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 26570783 - 26570727
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| |||||  |||||||||||||||  |||||||||||    
T  26570783 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagccta 26570727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 26571164 - 26571220
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  26571164 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 26571220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 41383167 - 41383221
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaata-gggggaaaagttcaattaagcct 41383221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 31569958 - 31569905
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||| ||||||||||| |||||||||| ||||||| ||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatag-ggggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 34147512 - 34147565
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||| |||||  |||||||| |||||| |||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 11351427 - 11351483
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||| | ||||||| ||||||| ||||    
T  11351427 ggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23011213 - 23011079
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgac-aaaagatagggtgcaaaatcgctcnnnnnnnnngagg-gggtgcaaaatcgcacaa 98  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||| |||| || |||||||||||| |||           || ||||||||||||||||||    
T  23011213 tttcccctcttttaatgatgattttgagcaaaacacatttgacaaaaaaatggggtgcaaaatctctcaaaaaaaaaatggtgggtgcaaaatcgcacaa 23011114  T
Q  99 ttaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||| |||||||||  |||||||| | ||||||||||    
T  23011113 ttagcaaaagata-aggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 120
Target Start/End: Complemental strand, 34576920 - 34576880
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaa 120  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  34576920 ggggtgtaaaatcgcacaattagcaaaagataggggggaaa 34576880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 37610620 - 37610671
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||| ||||  ||||||||| ||||||||||||||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactatagggggg-aaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 5187605 - 5187550
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||| |||| ||||| |||||||  || |||||||||||||||    
T  5187605 ggggtgcaaaatcgcacgattagcaaaaaataggggaaaagagtacaattaagcct 5187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 9869691 - 9869563
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgac--aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaa 98  Q
    ||||| ||||||||  ||||||||||||||||||||||||| |  |||| |  ||||||||||||||||          || ||||||||||||||||||    
T  9869691 tttcccctcttttaacgatgattttgaacaaaacacaattggccaaaaaaaaggggtgcaaaatcgctcaaaaaaaa--agtgggtgcaaaatcgcacaa 9869594  T
Q  99 ttaacaaaagataggggggaaaagtacaattaa 131  Q
    ||| ||||  |||||| |||||||| |||||||    
T  9869593 ttagcaaa--atagggaggaaaagtgcaattaa 9869563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 16726135 - 16726084
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaat 128  Q
    |||| |||||||||||||||||||  |||||||||||||| |||||| ||||    
T  16726135 gaggaggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 21207280 - 21207229
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  21207280 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 111
Target Start/End: Original strand, 23011383 - 23011413
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagata 111  Q
    |||||||||||||||||||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagata 23011413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 43464194 - 43464247
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagccta 43464247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 25941018 - 25941067
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||| ||||||||||  ||||| ||||||||| |||||||||    
T  25941018 tgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 9665609 - 9665560
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||| ||||||||| |||||||||  |||||||||| |||||||    
T  9665609 ggggtgcaaaattgcacaattagcaaaagata--ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15156016 - 15155881
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  15156016 tttcccctcttttagtgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 15155917  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||| ||||||||||||    
T  15155916 aacaaaagataggggggaaaagtgcaattaagccta 15155881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 37752338 - 37752470
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||         ||||||||||||||||||||||||    
T  37752338 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaatatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaatt 37752436  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||||| ||||||||||    
T  37752437 aacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12281347 - 12281480
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||         ||||||||||||||||||||||||    
T  12281347 tttcccctcttttaatgatgattttgaacaaaacacagttgacaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 12281446  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||| ||||||||||| ||||||||||    
T  12281447 aacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 16929164 - 16929296
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||         ||||||||||||||||||||||||    
T  16929164 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgttc-aaaaaaaagagggggtgcaaaatcgcacaatt 16929262  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    | ||||||||||||| ||||||| ||||||||||    
T  16929263 agcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 43246096 - 43246231
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    |||||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||| ||||||    
T  43246096 tttccttttttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcacacaat 43246195  T
Q  100 taacaaaagataggggggaaaagtacaattaagcct 135  Q
    || ||||||||||||||||||||| |||||||||||    
T  43246196 tagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 43162368 - 43162234
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc--nnnnnnnnngagggggtgcaaaatcgcacaa 98  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||           |||| |||||||||||||||||    
T  43162368 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaaaagaggaggtgcaaaatcgcacaa 43162269  T
Q  99 ttaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||| ||| ||||||||||| ||||||||||    
T  43162268 ttaacaaaatata-gggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9465795 - 9465908
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| ||||         ||||||||||||||||||||||||    
T  9465795 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaaaatggggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 9465894  T
Q  101 aacaaaagataggg 114  Q
    ||||||||||||||    
T  9465895 aacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 34313895 - 34313765
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||| ||||||||||||||||| ||  |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  34313895 tttcccctcttttaatgataattttgaacaaaacacagtttgcaaaagatagggtgcaaaatcgctcaaaaaaaa-gagggggtgcaaaatcgcacaatt 34313797  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||  |||||||||| ||||||||||    
T  34313796 aacaaaagata--ggggaaaagtgcaattaagcc 34313765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 33748116 - 33747982
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||         ||| || ||||||||| |||||||    
T  33748116 tttcctctcttttagtgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagcggatgcaaaatcacacaatt 33748017  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    | |||||||||  ||  |||||| ||||||||||||    
T  33748016 agcaaaagata-tggaaaaaagtgcaattaagccta 33747982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 765956 - 766054
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  765956 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctc--aaaaaaagagggggtgcaaaatcgcacaatt 766053  T

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Target: chr8; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 18020017 - 18020141
Alignment:
Q  8 tcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaa 107  Q
    ||||||| ||| ||||||||||||||| || ||| |||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||    
T  18020017 tcttttaatgacgattttgaacaaaacgcagttgccaaaagatggggtgcaaaatcgctcaaaaaaaa-gagggggtgcaaaatcgcacaattaacaaaa 18020115  T
Q  108 gataggggggaaaagtacaattaagcct 135  Q
    ||||  ||| |||||| |||||||||||    
T  18020116 gata--gggtaaaagtgcaattaagcct 18020141  T

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Target: chr8; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 41662216 - 41662106
Alignment:
Q  25 tgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagta 124  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||          ||||||||||||||||||||||||||||||||||| |||| ||| ||     
T  41662216 tgaacaaaacacagttggcaaaagatatggtgcaaaatcgcttaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtg 41662117  T
Q  125 caattaagcct 135  Q
    |||||||||||    
T  41662116 caattaagcct 41662106  T

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Target: chr8; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 15156182 - 15156239
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  15156182 gagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7127782 - 7127670
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||||  ||||||||||||||           ||||| |||||||||||||||||    
T  7127782 tttcccctcttttaatgatgatttttaacaaaacacaattgacaaaagatgaggtgcaaaatcgct---aagaaaaaaggggatgcaaaatcgcacaatt 7127686  T
Q  101 aacaaaagataggggg 116  Q
    | ||||||||||||||    
T  7127685 agcaaaagataggggg 7127670  T

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Target: chr8; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 16928999 - 16928940
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||    
T  16928999 gagggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagccta 16928940  T

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Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 37670082 - 37669958
Alignment:
Q  5 ctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaaca 104  Q
    |||||||||| | |||||||||||||||||||||||| |||||||| |||||||||||||||          ||||  | ||||||| ||||||||||||    
T  37670082 ctctcttttaataatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgct--aaaaaaaagaggtagggcaaaattgcacaattaaca 37669985  T
Q  105 aaagataggggggaaaagtacaattaa 131  Q
    ||||||| || |||||||| |||||||    
T  37669984 aaagataaggaggaaaagtgcaattaa 37669958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 41662367 - 41662457
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  41662367 aaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

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Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 43245961 - 43245871
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||    
T  43245961 aaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaagcc 43245871  T

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Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 765824 - 765736
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  765824 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 74816 - 74688
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||||||  ||||||||  ||||||||||||||           | |||||||||||||||||||||    
T  74816 tttcccctcttttaatgatgattttgaacaaaacacaattagcaaaagatgaggtgcaaaatcgct--aaaaaaaaaaaggggtgcaaaatcgcacaatt 74719  T
Q  101 aacaaaagataggggggaaaagtacaattaag 132  Q
    | |||||||| || ||||||||| ||||||||    
T  74718 agcaaaagat-ggagggaaaagtgcaattaag 74688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 12281214 - 12281123
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||||         |||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  12281214 aaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 9930759 - 9930879
Alignment:
Q  1 tttcctctcttttattgatgattttgaac-aaaacacaattgacaaaagatagggtgcaaa-atcgctcnnnnnnnnngagggggtgcaaaatcgcacaa 98  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||| || ||||||||| ||||||           |||| ||||||||||||||||    
T  9930759 tttcccctcttttaatgatgattttgaacaaaaacacaattgacaaaatatggggtgcaaacatcgct-aaaaaaaaacagggagtgcaaaatcgcacaa 9930857  T
Q  99 ttaacaaaagataggggggaaa 120  Q
    ||||||||||||| ||||||||    
T  9930858 ttaacaaaagataagggggaaa 9930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22787033 - 22787099
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| ||||||||||||||||||||||||||  |||||||  |||||||||||||||    
T  22787033 tttcccctcttttaatgatgattttgaacaaaacacaattggaaaaagatgaggtgcaaaatcgctc 22787099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 22851444 - 22851390
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||    
T  22851444 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23123473 - 23123338
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaa-cacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngag--ggggtgcaaaatcgcaca 97  Q
    ||||| |||||||| |||||||||||||||||| |||||||| |||||||| |||||||||||| ||           ||  |||||| |||||||||||    
T  23123473 tttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagat-gggtgcaaaatcactaaaaaaaaaaaagatggggtgtaaaatcgcaca 23123375  T
Q  98 attaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||| |||||||||||| ||||||||| ||||||||||    
T  23123374 attgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 37752138 - 37752084
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||    
T  37752138 ggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 13937389 - 13937445
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||| |||||||||| |||||| ||||||||||||||| ||||||||||||    
T  13937389 ggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 3463909 - 3463999
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         ||| |||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||    
T  3463909 aaaagatggggtgcaaaatcgctcaaaacaaaggagagggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 9823361 - 9823416
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  9823361 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 9822802 - 9822748
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||    
T  9822802 ggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 13026687 - 13026633
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 13026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 39724048 - 39724102
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  39724048 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 34498555 - 34498611
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  34498555 ggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagccta 34498611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 13027281 - 13027332
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||    
T  13027281 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 43598688 - 43598735
Alignment:
Q  16 tgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatc 63  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||||    
T  43598688 tgatgattttgaacaaaacacaattgacaaaaaatgtggtgcaaaatc 43598735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 3307388 - 3307338
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||| |||||||||||||| ||||| | ||||||||||    
T  3307388 tgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 3463769 - 3463707
Alignment:
Q  4 cctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct 66  Q
    ||||||||||| |||||||||| |||||||| |||||| ||||||||  |||| |||||||||    
T  3463769 cctctcttttaatgatgattttaaacaaaactcaattggcaaaagatgaggtgtaaaatcgct 3463707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 3463694 - 3463640
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||  |||||||||||    
T  3463694 ggggtgcaaaattgcacaattaacaaaagatagggggaaaatgt--aattaagccta 3463640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 11007750 - 11007814
Alignment:
Q  2 ttcctctcttttattgatgattttgaac-aaaacacaattgacaaaagatagggtgcaaaatcgct 66  Q
    |||| |||||||| |||||||||||||| |||||||||||| ||||| || |||||||||||||||    
T  11007750 ttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaaaat-gggtgcaaaatcgct 11007814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 43162536 - 43162588
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaatta 130  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||    
T  43162536 gagggggtgcaaaatcgcacgattgacaaaagata-gggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 2856580 - 2856524
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  |||||| |||||| ||||||||||||||    
T  2856580 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagccta 2856524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 23123514 - 23123567
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||||||||||||||||||||||| ||||||||| ||||  ||||| ||||||||    
T  23123514 gagggggtgcaaaatcgcacaattagcaaaagataagggg--aaagtgcaattaag 23123567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 25438846 - 25438794
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||    
T  25438846 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 37396762 - 37396706
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||   ||||  ||||||||||||||| ||||||||||||    
T  37396762 ggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagccta 37396706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 112
Target Start/End: Original strand, 74981 - 75016
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagatag 112  Q
    ||||||||||||||||||||||||| ||||||||||    
T  74981 gagggggtgcaaaatcgcacaattagcaaaagatag 75016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 13936776 - 13936722
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||   ||||||||| |||||||||| |||||||||||    
T  13936776 ggggtgcaaaatcgcacaattggtaaaagatag-ggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 22851958 - 22852009
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||||||||||  ||||||||||||  ||||| |||||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaagc 22852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 34498176 - 34498125
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||||| |||||  |||||||| |||||| |||||||    
T  34498176 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 767720 - 767761
Alignment:
Q  94 cacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  767720 cacaattaacaaaagata-gggggaaaagtgcaattaagccta 767761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 22786892 - 22786838
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||| ||||||||  ||||||||||||| |||||| ||||||| ||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaaccta 22786838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 37397145 - 37397199
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||| ||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  37397145 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 43598756 - 43598790
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagatagggg 115  Q
    ||||||||||||||||||||| |||||||||||||    
T  43598756 gggtgcaaaatcgcacaattagcaaaagatagggg 43598790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 17431339 - 17431286
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||| |||||||||||||| |||||  ||| ||||||||||| |||||||||||    
T  17431339 ggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 18019968 - 18019915
Alignment:
Q  77 gagggggtgcaaaatcgcacaatta-acaaaagataggggggaaaagtacaatt 129  Q
    |||||||||||||||||||||||||   ||||||||||||| |||||| |||||    
T  18019968 gagggggtgcaaaatcgcacaattaggaaaaagatagggggcaaaagtgcaatt 18019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 41662573 - 41662520
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||  ||||  ||| ||||||||||| |||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 6092825 - 6092793
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggg 116  Q
    ||||||||||||||||| |||||||||||||||    
T  6092825 tgcaaaatcgcacaattgacaaaagataggggg 6092793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 6e-42; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 18241987 - 18241853
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  18241987 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaatt 18241888  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||| |||||||||||    
T  18241887 aacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 11656706 - 11656836
Alignment:
Q  4 cctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaac 103  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||         ||||||||||||||||||||||||| |    
T  11656706 cctctcttttattgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaataaagagggggtgcaaaatcgcacaattagc 11656805  T
Q  104 aaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||| | ||||||| ||||||||||    
T  11656806 aaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33972125 - 33972012
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||| ||||||    
T  33972125 tttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctc-aaaaataagagggggtgcaaaatcgtacaatt 33972027  T
Q  101 aacaaaagatagggg 115  Q
    |||||||||||||||    
T  33972026 aacaaaagatagggg 33972012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 21032200 - 21032336
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnn-gagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||||||||          |||| || |||||||||||||||    
T  21032200 tttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatggggtgcaaaatcgctcaaagaaaaaagaggaggcgcaaaatcgcacaat 21032299  T
Q  100 taacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||||| ||||||||||||    
T  21032300 taacaaaagataggggggaaaagtgcaattaagccta 21032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 5 - 134
Target Start/End: Complemental strand, 30388189 - 30388062
Alignment:
Q  5 ctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaaca 104  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||         ||| || |||||||||||||||||| ||    
T  30388189 ctctcttttattgatgattttgaacaaaacataattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagaggctgcaaaatcgcacaattagca 30388091  T
Q  105 aaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||| ||||| ||||||||||    
T  30388090 aaagatagggggg-aaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 7 - 136
Target Start/End: Complemental strand, 10039801 - 10039674
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||         || |||||||||||||||||||||| ||||    
T  10039801 ctcttttaatgatgattttgaacaaaacacaactgacaaaagatggggtgtaaaatcgctcataaaaaaaga-ggggtgcaaaatcgcacaattagcaaa 10039703  T
Q  107 agataggggggaaaagtacaattaagccta 136  Q
    ||||| ||||||||||| ||||||||||||    
T  10039702 agata-gggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 3403953 - 3404045
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3403953 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3403821 - 3403757
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgc 65  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3403821 tttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgc 3403757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23250724 - 23250591
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaa-cacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||||||||||| |||||||| |||||||||||| ||||||||||||         |||||||||||| ||| ||||||    
T  23250724 tttcccctcttttaatgatgattttgaacaaaaacacaattggcaaaagatagggcgcaaaatcgctc-aaaaaaaagagggggtgcaagatctcacaat 23250626  T
Q  100 taacaaaagataggggggaaaagtacaattaagcct 135  Q
    | |||||||||| |||| |||||| |||||||||||    
T  23250625 tgacaaaagata-ggggaaaaagtgcaattaagcct 23250591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 31598583 - 31598476
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||         ||||||||| ||||||||||| ||| ||||    
T  31598583 ctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatctctc--aaaaaaagagggggtgaaaaatcgcacagttagcaaa 31598486  T
Q  107 agataggggg 116  Q
    |||| |||||    
T  31598485 agatgggggg 31598476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 33658661 - 33658726
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct 66  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  33658661 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagacggggtgcaaaatcgct 33658726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 3403771 - 3403717
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  3403771 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 30388360 - 30388418
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  30388360 agggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaaaccta 30388418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 31598099 - 31598043
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatc 63  Q
    |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||    
T  31598099 ctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatc 31598043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 12714488 - 12714436
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaatt 129  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||||    
T  12714488 gaggggctgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaatt 12714436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 21032068 - 21031978
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| |||||| || ||||||||||| |||||||||||    
T  21032068 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagtta-gggggaaaagtgcaattaagcct 21031978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 33829636 - 33829692
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  33829636 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 7654548 - 7654603
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  7654548 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 33829044 - 33828990
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  33829044 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 13579648 - 13579706
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||||| |||| |||| ||| ||||||| ||||||||||||    
T  13579648 gagggggtgcaaaatcgcacaattagcaaacgata-gggagaaaagtgcaattaagccta 13579706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31598732 - 31598778
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  31598732 tgcaaaatcgcacaattaacaaaagata-gggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 3825583 - 3825530
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||| |||||||    
T  3825583 gagggggtgcaaaatcgcacaattagcaaaatata-gggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 31598274 - 31598327
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| ||||||||| | ||||||| |||||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagata-gagggaaaaatacaattaagcct 31598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 2762664 - 2762611
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||| |||||    
T  2762664 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 2762611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 10039840 - 10039893
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||| |||||    
T  10039840 gagggggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 10039893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 11656660 - 11656608
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaa-gataggggggaaaagtacaatt 129  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||| |||||    
T  11656660 agggggtgcaaaatcgcacaattatcaaaacgatagggggcaaaagtgcaatt 11656608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 18242120 - 18242190
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggg 114  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||    
T  18242120 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggg 18242190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 21032158 - 21032111
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaa-aagataggggggaaaagt 123  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  21032158 gagggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagt 21032111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 10087858 - 10087912
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  | ||||||||||||| ||||||||||    
T  10087858 ggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 33974299 - 33974353
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||| | ||||||||||    
T  33974299 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 18242033 - 18242082
Alignment:
Q  81 gggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| |||||    
T  18242033 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 18242082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 2762540 - 2762500
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagatagggggg 117  Q
    ||||||||||||||||||||||||| ||||| || ||||||    
T  2762540 gagggggtgcaaaatcgcacaattagcaaaaaattgggggg 2762500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 33655114 - 33655169
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||| ||||||||| |||||||||  ||||| |||| |||||||||||    
T  33655114 gggggtgcaaaattgcacaattagcaaaagata-aggggacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 10293830 - 10293963
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  10293830 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaatt 10293929  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||||| ||||||||||    
T  10293930 aacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 20968851 - 20968717
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  20968851 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 20968752  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||| || |||||||||||    
T  20968751 aacaaaagataggggggaaaggtgcaattaagcct 20968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18875112 - 18875245
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||| ||| ||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||         ||||||||||||||||| ||||||    
T  18875112 tttcttctattttaatgatgattttgaataaaacacaattgccaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaatt 18875211  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    | |||||||||||||| |||||| ||||||||||    
T  18875212 agcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 134
Target Start/End: Complemental strand, 17372429 - 17372298
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 101  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||||||||          ||||||||||||||||||||||||    
T  17372429 ttcccctcttttaatgatgattttgaacaaaatacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaac-agggggtgcaaaatcgcacaatta 17372331  T
Q  102 acaaaagataggggggaaaagtacaattaagcc 134  Q
     ||||| |||||||| ||| || ||||||||||    
T  17372330 gcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26540790 - 26540905
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||          |||  ||| ||||||||||||||    
T  26540790 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaaaggaagtgtaaaatcgcacaatt 26540889  T
Q  101 aacaaaagataggggg 116  Q
    | ||||||||||||||    
T  26540890 agcaaaagataggggg 26540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13657579 - 13657513
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  13657579 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 13657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45060728 - 45060662
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  45060728 tttcccctattttaatgatgattttgaacaaaacacaattgacaaaaaatagggtgcaaaatcgctc 45060662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 9026955 - 9027017
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatc 63  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  9026955 tttcctctcttttaatgatgatttttaacaaaacacaattggcaaaagatggggtgcaaaatc 9027017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3644665 - 3644599
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| ||||||||| |||||||||||||||| ||||||||  |||||||||||||||    
T  3644665 tttcccctcttttaatgatgatttcgaacaaaacacaattggcaaaagatgaggtgcaaaatcgctc 3644599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 47870945 - 47870887
Alignment:
Q  9 cttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    |||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  47870945 cttttaatgatgatttcgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 47870887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1101044 - 1100983
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaat 62  Q
    ||||| |||||||| |||| ||||||||||||| |||||||||||||||| |||||||||||    
T  1101044 tttcccctcttttaatgataattttgaacaaaatacaattgacaaaagatggggtgcaaaat 1100983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 17440990 - 17441118
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| ||||||||||||||| |||||||||||||| | || |||||||||||| ||           |  | ||||||||||||||||||||||||    
T  17440990 ctcttttaatgatgattttgaacataacacaattgacaacatatggggtgcaaaatcactaaaaataaaaaaaagagtgcaaaatcgcacaattaacaaa 17441089  T
Q  107 agataggggggaaaagtacaattaagcct 135  Q
    |||||| | |||||| | |||||||||||    
T  17441090 agatagagaggaaaaatgcaattaagcct 17441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 47871121 - 47871176
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  47871121 gggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagcct 47871176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 10293698 - 10293608
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         |||||||||||||||||||||||| ||||||||||||||  |||| | ||||||||||    
T  10293698 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaagcc 10293608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 18874935 - 18874880
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagccta 18874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 42627467 - 42627599
Alignment:
Q  1 tttcctctcttttattgatgattttgaac-aaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||||||| |||| ||||||| ||||| || ||||||||||||||||         || ||| ||||||||| ||||||    
T  42627467 tttcccctcttttaatgatgattttgaacaaaaaaacaattggcaaaaaatggggtgcaaaatcgctcataaaaaaaga-gggatgcaaaatcacacaat 42627565  T
Q  100 taacaaaagataggggggaaaagtacaattaagcc 134  Q
    || ||||||||| | ||||||||| ||||||||||    
T  42627566 tagcaaaagata-gagggaaaagtgcaattaagcc 42627599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 45060872 - 45060927
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagccta 45060927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 53687942 - 53687887
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  53687942 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 53687887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 3644783 - 3644837
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||||||||| ||| ||||||||| | ||||||||||    
T  3644783 ggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaatta 130  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||| |||||| ||||||| ||||||| ||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 14015827 - 14015692
Alignment:
Q  1 tttcctctcttttattgatgattttgaac-aaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||||||| |||||||||||  |||||||| |||||||||||| |||         |||| ||||||||||||||| ||    
T  14015827 tttcccctcttttaatgatgattttgaacaaaaacacaatttgcaaaagat-gggtgcaaaatcactcaaaaaaagagaggaggtgcaaaatcgcacgat 14015729  T
Q  100 taacaaaagataggggggaaaagtacaattaagccta 136  Q
    | ||||||||||  ||  |||||| ||||||| ||||    
T  14015728 tgacaaaagataaaggaaaaaagtgcaattaaaccta 14015692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 36180990 - 36181046
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||| |||||||||||||||||||||  |||||| |||||||| ||||||||||||    
T  36180990 ggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagccta 36181046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 48159951 - 48159895
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  48159951 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 8315083 - 8315137
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatatagggggg-aaagtgcaattaagccta 8315137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 27238518 - 27238463
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||  ||||  ||||| ||||||||||||||||||||||    
T  27238518 gggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagccta 27238463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 42455839 - 42455788
Alignment:
Q  85 gcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||| |||||  ||||||||||||||| ||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 42455788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 1927825 - 1927772
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||| ||||  |||||||||||||||||| || ||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

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Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 40848961 - 40849017
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  |||| |||||||||| ||||||||||||    
T  40848961 ggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 1101182 - 1101237
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||| ||||||||||||  | ||||||||| ||||||||||| ||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagccta 1101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 4947499 - 4947545
Alignment:
Q  20 gattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    |||||||||||||||||||||| |||||||||  ||||||||||||||    
T  4947499 gattttgaacaaaacacaattggcaaaagata-tgtgcaaaatcgctc 4947545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 23630035 - 23630086
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||| ||||| ||||| || |||||| |||||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaa 23630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 26007235 - 26007181
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||| | |||||||||||    
T  26007235 ggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaagcct 26007181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 3353181 - 3353128
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  3353181 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 42673296 - 42673349
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  42673296 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 47665963 - 47665909
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||| |||||  ||| |||| |||||| ||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagccta 47665909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 47666335 - 47666389
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||| ||||||||  ||||  ||||||||||||||| ||||||||||    
T  47666335 ggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 48160333 - 48160387
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||| ||||| ||||||||||    
T  48160333 ggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 53766580 - 53766634
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||| ||||||||  ||||  ||||||||||||||| |||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcct 53766634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 121
Target Start/End: Original strand, 1928434 - 1928475
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaa 121  Q
    |||||||||||||||||||||  |||||||||||| ||||||    
T  1928434 ggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa 1928475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 113
Target Start/End: Complemental strand, 9026789 - 9026756
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagatagg 113  Q
    |||||||||||| |||||||||||||||||||||    
T  9026789 ggggtgcaaaattgcacaattaacaaaagatagg 9026756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 10293784 - 10293735
Alignment:
Q  81 gggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| |||||    
T  10293784 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 10293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 113
Target Start/End: Original strand, 14015964 - 14015997
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagatagg 113  Q
    |||||||||||||||||||||| |||||||||||    
T  14015964 ggggtgcaaaatcgcacaattagcaaaagatagg 14015997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 18875065 - 18875017
Alignment:
Q  82 ggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    |||||||||||||||||||| | ||||||||||||| |||||| |||||    
T  18875065 ggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 18875017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 11883847 - 11883980
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||         ||||||||||||||||||||||||    
T  11883847 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 11883946  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    | ||||||||||||||||||||| ||||||||||    
T  11883947 agcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40469560 - 40469427
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  40469560 tttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 40469461  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    | ||||||||||| ||||||| ||||||||||||    
T  40469460 agcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 30191146 - 30191279
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  30191146 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 30191245  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    || |||||||||||||||||||| ||||||||||    
T  30191246 aataaaagataggggggaaaagtgcaattaagcc 30191279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 20347295 - 20347161
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| ||||||||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||         || |||||||||||||||||||||    
T  20347295 tttcccctcttttaacgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaga-ggggtgcaaaatcgcacaatt 20347197  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||| ||||||||||  |||||||||||    
T  20347196 aacaaaagatagaggggaaaagtgtaattaagccta 20347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 32672975 - 32672842
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||| ||||||||||||||||||||    
T  32672975 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaatt 32672876  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||| ||   |||||| ||||||||||    
T  32672875 aacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 6 - 135
Target Start/End: Complemental strand, 26737607 - 26737481
Alignment:
Q  6 tctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaa 105  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |          ||||||||||||||||||||||||| |||    
T  26737607 tctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcg-ttaaaaaaaaagagggggtgcaaaatcgcacaattagcaa 26737509  T
Q  106 aagataggggggaaaagtacaattaagcct 135  Q
    ||||||  || ||||||| |||||||||||    
T  26737508 aagata--ggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 6171288 - 6171156
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| |||          |   |||||||||||||||||||    
T  6171288 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcactcaaaaaaaaaaaaaaggtgcaaaatcgcacaatt 6171189  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||| ||||||||||| ||||||||||    
T  6171188 aacaaaagata-gggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 17345956 - 17346090
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| || || |||||||||||||         |||| |||||||||||||||||||    
T  17345956 tttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggatgcaaaatcgctcaaaaataaagaggaggtgcaaaatcgcacaatt 17346055  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    | |||||||||   || |||||| ||||||||||||    
T  17346056 agcaaaagata-aaggaaaaagtgcaattaagccta 17346090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 15920890 - 15920789
Alignment:
Q  21 attttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaa 120  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||         ||||||||||||||||||||||||||||||||||||| ||||||    
T  15920890 attttgaacaaaacacaattggcaaaagatggggtgcaaaattgctcaaaaaaaa-gagggggtgcaaaatcgcacaattaacaaaagataggagggaaa 15920792  T
Q  121 agt 123  Q
    |||    
T  15920791 agt 15920789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 11883680 - 11883622
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  11883680 gagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15321610 - 15321676
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15321610 tttcccctcttttaatgatgattttgaacaaaacacaattgataaaagatggggtgcaaaatcgctc 15321676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 43495439 - 43495308
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 101  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||| ||  ||||||||||||||          |||||| || |||||||||||||||    
T  43495439 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgct--aaaaaaaagaggggatgaaaaatcgcacaatta 43495342  T
Q  102 acaaaagataggggggaaaagtacaattaagcct 135  Q
     ||||| ||||| ||||||||| |||||||||||    
T  43495341 gcaaaatataggtgggaaaagtgcaattaagcct 43495308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 30191013 - 30190921
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  30191013 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 24832421 - 24832330
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||||         || |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  24832421 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 20347461 - 20347519
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||    
T  20347461 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 40469693 - 40469780
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| |||||||||||||| |||||| |||||||    
T  40469693 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 6495653 - 6495776
Alignment:
Q  11 tttattgatgattttgaacaaaa-cacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaaga 109  Q
    |||| |||||||||||||||||| | |||||| ||||||||   ||||||||||||||          ||| ||||||||||||||||||| ||||||||    
T  6495653 tttaatgatgattttgaacaaaaacgcaattggcaaaagatgacgtgcaaaatcgctcaaaaaaaa--aggaggtgcaaaatcgcacaattcacaaaaga 6495750  T
Q  110 taggggggaaaagtacaattaagcct 135  Q
    ||||| |||||||| |||||||||||    
T  6495751 tagggaggaaaagtgcaattaagcct 6495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 18296130 - 18296077
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  18296130 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 2639482 - 2639538
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  2639482 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 26841641 - 26841585
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  26841641 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 26841585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 6171456 - 6171511
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 7591255 - 7591204
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  7591255 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 8851582 - 8851637
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  8851582 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 18296693 - 18296748
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  18296693 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 26737781 - 26737835
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18055265 - 18055330
Alignment:
Q  1 tttcctctcttttattgatgattttgaaca-aaacacaattgacaaaagatagggtgcaaaatcgc 65  Q
    ||||| |||||||| ||||||||||||| | ||||||||||| |||||||| ||||||||||||||    
T  18055265 tttcccctcttttaatgatgattttgaagacaaacacaattggcaaaagatggggtgcaaaatcgc 18055330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 5378715 - 5378659
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 5378659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 6495519 - 6495468
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  6495519 gggtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaagc 6495468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 7664302 - 7664246
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| | |||  ||||||||||||||| ||||||||||||    
T  7664302 ggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 40221438 - 40221382
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagat-agggtgcaaaat 62  Q
    |||||||| |||||||||||||| ||||||||||||||||||||  |||||||||||    
T  40221438 ctcttttaatgatgattttgaacgaaacacaattgacaaaagatgggggtgcaaaat 40221382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 41790912 - 41790968
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||| ||||||||||||||||  ||||| ||||||||||||||| ||||||||||||    
T  41790912 ggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagccta 41790968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 2638874 - 2638819
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||| ||||| | |||||||||||    
T  2638874 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 37720258 - 37720203
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||||||    
T  37720258 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 7664673 - 7664727
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  |||||| |||||||| ||||||||||    
T  7664673 ggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 17851032 - 17850978
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  17851032 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 26842238 - 26842292
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| || |||||||    
T  26842238 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 29230334 - 29230280
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||| ||||||| ||||||||||| | |||||||| ||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaagccta 29230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 5379959 - 5380015
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||   |||  ||||||||||||||| ||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 8851202 - 8851151
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||    
T  8851202 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 15321446 - 15321394
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||| |||||||| |||||||||||||||||||  |||||||||| ||||||||    
T  15321446 aggggatgcaaaattgcacaattaacaaaagata--ggggaaaagtgcaattaag 15321394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 18055103 - 18055050
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||| ||||||||    
T  18055103 gagggggtgcaaaatcgcacaattagcaaaag-ta-gggggaaaagtgcaattaag 18055050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 18055316 - 18055367
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||||| ||||||| ||| ||| |||||| |||||||    
T  18055316 ggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaa 18055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 43495481 - 43495535
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||| |||||||    
T  43495481 gagggggtgcaaaatcgcacaattgacaaaaagata-gggggaaaagtgcaattaa 43495535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 7591850 - 7591904
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||||||||| | ||||  | ||||||||||    
T  7591850 ggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 6171334 - 6171383
Alignment:
Q  81 gggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||| |||||||| |||| |||||| |||||    
T  6171334 gggtgcaaaatcgcacaattaacaaaaagataaggggcaaaagtgcaatt 6171383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 17345912 - 17345859
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||| ||||||||||||||||| |||| |||||||| |||||| |||||    
T  17345912 gagggggtgaaaaatcgcacaattaacaaaaatatagggggcaaaagtgcaatt 17345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 26737657 - 26737706
Alignment:
Q  81 gggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| |||||    
T  26737657 gggtgcaaaatcgcacaattagcaaaaagatagggggcaaaagtgcaatt 26737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 29343633 - 29343584
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||| ||||||| ||||||||||| | |||||||| |||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29343584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 115
Target Start/End: Original strand, 32673141 - 32673178
Alignment:
Q  78 agggggtgcaaaatcgcacaattaacaaaagatagggg 115  Q
    |||||||||||||||||||||||  |||||||||||||    
T  32673141 agggggtgcaaaatcgcacaattggcaaaagatagggg 32673178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 43495602 - 43495658
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||| |||||||||||||||||| ||||| ||||| ||| ||||| ||||||||||    
T  43495602 gaggggatgcaaaatcgcacaattagcaaaatataggtggg-aaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaa-gataggggggaaaagtacaatt 129  Q
    |||||||||||||||||||| ||||| |||| ||||||||||| |||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 1245 - 1118
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  1245 ctcttttaatgatgattttgaacaaaacacaattggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaa 1146  T
Q  107 agataggggggaaaagtacaattaagcc 134  Q
    |||||||||| |||||| ||||||||||    
T  1145 agatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 1384 - 1474
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  |||||||||||||| |||||| ||||||||||    
T  1384 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16555648 - 16555513
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||    
T  16555648 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagat-gggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaat 16555550  T
Q  100 taacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  16555549 taacaaaagataagggggaaaagtgcaattaagccta 16555513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 13198827 - 13198961
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||| ||||||||||||||  ||| |||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  13198827 tttcccctcttttaatgatgactttgaacaaaacacggttggcaaaagatagggtgcaaaatcgctcaaaacaaaagagggggtgcaaaatcgcacaatt 13198926  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||| |||||||||||    
T  13198927 aacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 11241521 - 11241389
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         |||||| |||||||||||||||||    
T  11241521 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctc-aaaaaaaagaggggatgcaaaatcgcacaatt 11241423  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||| || |||||||| ||||||||||    
T  11241422 aacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3930311 - 3930179
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||||||||||||||||| ||||    
T  3930311 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcataatt 3930212  T
Q  101 aacaaaagataggggggaaaagtacaattaagcc 134  Q
    || |||||||| |||| |||||| ||||||||||    
T  3930211 aataaaagata-ggggaaaaagtgcaattaagcc 3930179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39415357 - 39415244
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||         ||| ||||||||||||||||||||    
T  39415357 tttcccctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaatt 39415258  T
Q  101 aacaaaagataggg 114  Q
    | ||||||||||||    
T  39415257 agcaaaagataggg 39415244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 49178736 - 49178866
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct-cnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |         |||||||||||||||||||||||    
T  49178736 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctccaaaaaaaaagagggggtgcaaaatcgcacaat 49178835  T
Q  100 taacaaaagataggggggaaaagtacaatta 130  Q
    |  ||||||||||||| ||||||| ||||||    
T  49178836 tggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 35393698 - 35393830
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||         ||||||||||||| ||||||||||    
T  35393698 tttcccctcttttaatgatgattttgagcaaaacacaattgacaaaagatggggtgcaaaatcgctc-ataaaaaagagggggtgcaaattcgcacaatt 35393796  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    | ||||||||| ||| ||||||| |||||||||||    
T  35393797 agcaaaagata-gggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 8488404 - 8488534
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||    
T  8488404 tttcctctcttttaatgatgattttgaacaaaatacaattgacaaaagatggggtgcaaaatcgctc-aaaaaaaagagggggtgcaaaatcgcacaatt 8488502  T
Q  101 aacaaaagataggggggaaaagtacaattaagc 133  Q
    |  ||||||||  || ||||||| |||||||||    
T  8488503 agaaaaagata-aggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 27304849 - 27304735
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| || || |||||||||||||         ||||||||||||||||||||||||    
T  27304849 tttcctctcttttaatgatgattttgaacaaaacacaattggcaaaatatgggttgcaaaatcgctcaaaagaaaagagggggtgcaaaatcgcacaatt 27304750  T
Q  101 aacaaaagatagggg 115  Q
    | || ||||||||||    
T  27304749 agcagaagatagggg 27304735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 22681802 - 22681935
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||| | ||||||||||||| |||||||||| ||||          |   |||||||||| ||||||||    
T  22681802 tttcccctcttttaatgatgattttgaacaaaacatagttgacaaaagatatggtgcaaaattgctcaaaaaaataaa--tggtgcaaaattgcacaatt 22681899  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||| ||||||||| ||||||||||||    
T  22681900 aacaaaagataggagggaaaagtgcaattaagccta 22681935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 3844411 - 3844470
Alignment:
Q  8 tcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  3844411 tcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 3844470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 8182092 - 8182228
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnnga-gggggtgcaaaatcgcacaat 99  Q
    |||| |||||||| ||||||||||||||||||||||||||  ||||||| || |||||||||||||          || |||||||||||||||||||||    
T  8182092 ttcccctcttttaatgatgattttgaacaaaacacaattggtaaaagatgggatgcaaaatcgctcaacaaaaaaagaggggggtgcaaaatcgcacaat 8182191  T
Q  100 taac-aaaagataggggggaaaagtacaattaagcct 135  Q
    || | |||| ||||||| ||||||| |||||||||||    
T  8182192 tagcaaaaaaataggggtgaaaagtgcaattaagcct 8182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5206092 - 5206028
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgc 65  Q
    |||||||||||||| |||||||||||||||||| | ||||| |||||||| ||||||||||||||    
T  5206092 tttcctctcttttaatgatgattttgaacaaaataaaattggcaaaagatggggtgcaaaatcgc 5206028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 56505747 - 56505691
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  56505747 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 3930477 - 3930535
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  3930477 gagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 16555781 - 16555871
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         || |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  16555781 aaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 24775783 - 24775838
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  24775783 ggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 18077199 - 18077257
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||    
T  18077199 gagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7603247 - 7603186
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaat 62  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  7603247 tttcccctattttaatgatgattttgaacaaaacacaattgacaaaagagggggtgcaaaat 7603186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 5206042 - 5205986
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||  |||||||||||||||||| |||||||| ||||||||||||    
T  5206042 ggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagccta 5205986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 22681631 - 22681576
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  22681631 gagggggtgcaaaatcgcacaattgacaaaagatagggggg-aaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 39744465 - 39744521
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| ||||||||||||    
T  39744465 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagccta 39744521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 50678833 - 50678777
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  50678833 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 54508933 - 54508814
Alignment:
Q  16 tgatgattttgaacaaaa-cacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggg 114  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||         ||| |||||||||||| |||||||  |||||||| ||     
T  54508933 tgatgattttgaacaaaaacacaatttgcaaaagatagggtgcaaaatcgctc-aaaaaaaagagagggtgcaaaatcacacaattggcaaaagattgga 54508835  T
Q  115 gggaaaagtacaattaagcct 135  Q
    || |||||| |||||||||||    
T  54508834 ggaaaaagtgcaattaagcct 54508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 9023680 - 9023735
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  9023680 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 24775742 - 24775797
Alignment:
Q  11 tttattgatgattttgaacaaaa-cacaattgacaaaagatagggtgcaaaatcgc 65  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  24775742 tttaatgatgattttgaacaaaaacacaattgacaaaagatggggtgcaaaatcgc 24775797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 5206231 - 5206283
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  5206231 gggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 11241661 - 11241716
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||    
T  11241661 ggggtgcaaaatcccacaattggcaaaagata-gggggaaaagtacaattaagccta 11241716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 28196400 - 28196344
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  28196400 ggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 28196344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 36095907 - 36095816
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||||||          | |||||||||||||||||||||  ||||||||||||| ||||| | |||||||||||    
T  36095907 aaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 45830196 - 45830252
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||| |||||||||||||| |||||||||||||| ||||||| | ||||||||||    
T  45830196 ggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaagccta 45830252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 293217 - 293272
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  |||||||| |||||| |||||||||||    
T  293217 ggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 28196773 - 28196828
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||||||    
T  28196773 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 36096475 - 36096526
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||    
T  36096475 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 169439 - 169493
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||||||||||||| | ||||||||||    
T  169439 ggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 32703650 - 32703704
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  32703650 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 50679424 - 50679478
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||| ||||||  ||||||||||||| ||||||| ||||||||||    
T  50679424 ggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 7603200 - 7603146
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||| |||||||||| ||||||||  |||||||||| |||||||||    
T  7603200 gagggggtgcaaaattgcacaattaaaaaaagata--ggggaaaagtgcaattaagc 7603146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 8182049 - 8181992
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaa-gataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||||||||||||  ||||| ||||||||| |||||| |||||||||    
T  8182049 gagggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9380744 - 9380797
Alignment:
Q  83 gtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  9380744 gtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 23540253 - 23540306
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||| |||||  ||||||| ||||||| ||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 25161932 - 25161879
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||||    
T  25161932 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 27304890 - 27304943
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    ||||||||||||||||||||||||| | ||||||||||||| |||||| |||||    
T  27304890 gagggggtgcaaaatcgcacaattagcaaaaagatagggggaaaaagtgcaatt 27304943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 9023298 - 9023242
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||| ||||||| ||||||||||||    
T  9023298 ggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagccta 9023242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 8488242 - 8488187
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||||||||||||| ||   |||| | |||||||||||    
T  8488242 ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcct 8488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 26207746 - 26207801
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  ||||||||||||| | |||||||||||    
T  26207746 ggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 32703279 - 32703224
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||| ||||||||||||  ||||  ||||||||||||||| |||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 43051252 - 43051307
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||| |||||||  ||||||||||||| ||||| | |||||||||||    
T  43051252 ggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 4239366 - 4239420
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  |||||||| |||||| ||||||||||    
T  4239366 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 8181927 - 8181873
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||| ||||||| ||||||||| |||||  ||||| ||||||||||||||||    
T  8181927 gagggggagcaaaattgcacaattagcaaaatttagggaggaaaagtacaattaa 8181873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 9380361 - 9380307
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||| ||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  9380361 ggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 13198660 - 13198606
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||||||||  |||||||||  || ||||||| |||||||    
T  13198660 gagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 45829047 - 45828993
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||| |||||||||||||||   |||||||||| | |||||||||||||||||||    
T  45829047 gggtacaaaatcgcacaattggtaaaagataggagtgaaaagtacaattaagcct 45828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 47219203 - 47219257
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||| |||||||||| || ||||| | ||||||| ||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaaaccta 47219257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 11529222 - 11529169
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||| |||||||  |||||| ||||| |||||||| |||||||||    
T  11529222 ggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 43292091 - 43292038
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||||||||| |||||  |||||||  |||||| |||||||||    
T  43292091 ggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 169068 - 169012
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggg-gaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  |||||||| ||||||| |||||||||||    
T  169068 ggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 292832 - 292780
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||| ||||||||  ||||  ||||||||||||||| ||||||||||||    
T  292832 tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagccta 292780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  82 ggtgcaaaatcgcacaattaac-aaaagataggggggaaaagtacaatt 129  Q
    |||||||||||||||||||| | |||||||| ||||||||||| |||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 39912101 - 39912053
Alignment:
Q  87 aaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||| |||  |||||| |||||||| |||||||||||    
T  39912101 aaaatcgcacaattaataaactatagggaggaaaagtgcaattaagcct 39912053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 54509116 - 54509156
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa 121  Q
    ||||||||||||||||||||| ||||| |||||||| ||||    
T  54509116 gggtgcaaaatcgcacaattagcaaaaaatagggggaaaaa 54509156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 81; Significance: 9e-38; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 6528 - 6393
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct-cnnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||           |||||||||||||||||||||||    
T  6528 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctaaaaaaaaaaagagggggtgcaaaatcgcacaat 6429  T
Q  100 taacaaaagataggggggaaaagtacaattaagcct 135  Q
    || ||||||||||||||||||||| |||||||||||    
T  6428 tagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 6661 - 6750
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  6661 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagata-gggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 4e-37; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9412156 - 9412022
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||         ||||||||||||||||||||||||    
T  9412156 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtggaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaatt 9412057  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||| ||||||||||| |||||||||||    
T  9412056 aacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 3687488 - 3687353
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||          |||||||||||||||||||||||    
T  3687488 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaat 3687389  T
Q  100 taacaaaagata-ggggggaaaagtacaattaagcc 134  Q
    |||||||||||| |||||||||||| ||||||||||    
T  3687388 taacaaaagatagggggggaaaagtgcaattaagcc 3687353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 6908345 - 6908211
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||           |  ||||||||||||||||||||    
T  6908345 tttcctctcttttaatgatgattttgaacaaaacacaattggcaaaagatagagtgcaaaatcgctaaaaaaaaaaaaaagggtgcaaaatcgcacaatt 6908246  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||| ||||| ||||||||||| ||||||||||||    
T  6908245 aacaatagata-gggggaaaagtgcaattaagccta 6908211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 29291939 - 29291808
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||         ||||||||||||||||||| ||||    
T  29291939 tttcccctcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgtaaaatcgctctaaaaaaaagagggggtgcaaaatcgcataatt 29291840  T
Q  101 aacaaaagataggggggaaaagtacaattaag 132  Q
    | |||||||||||| | |||||| ||||||||    
T  29291839 atcaaaagatagggagaaaaagtgcaattaag 29291808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 7 - 136
Target Start/End: Original strand, 23686646 - 23686773
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||         ||||||   |||||||||||||||| ||||    
T  23686646 ctcttttaatgatgattttgaacaaaacacatttggcaaaagatggggtgcaaaatcgctccaaaaaaaagagggg--tcaaaatcgcacaattagcaaa 23686743  T
Q  107 agataggggggaaaagtacaattaagccta 136  Q
    |||||||||| |||||| ||||||||||||    
T  23686744 agatagggggaaaaagtgcaattaagccta 23686773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 131
Target Start/End: Original strand, 27096264 - 27096392
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 101  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||         |||||| ||||||||| |||||||     
T  27096264 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattg 27096363  T
Q  102 acaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||| ||||||||||| |||||||    
T  27096364 acaaaagata-gggggaaaagtgcaattaa 27096392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 27182039 - 27181911
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 101  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||         |||||| ||||||||| |||||||     
T  27182039 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatggggtgcaaaatcgctcaaaaaagaagaggggatgcaaaatcacacaattg 27181940  T
Q  102 acaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||| ||||||||||| |||||||    
T  27181939 acaaaagata-gggggaaaagtgcaattaa 27181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 5349587 - 5349489
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| |||||||||||||||||||||  |||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||    
T  5349587 ctcttttaatgatgattttgaacaaaacacggttgacaaaagatggggtgcaaaatcgctcaaaaaaa---agggggtgcaaaatcgcacaattaacaaa 5349491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13772745 - 13772683
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatc 63  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13772745 tttcctctattttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatc 13772683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 38191488 - 38191619
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc--nnnnnnnnngagg--gggtgcaaaatcgcacaattaa 102  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||           ||||  ||||||||||||||| ||||||    
T  38191488 ctcttttaatgatgattttgaacaaaacacaattgacaaaaaataggatgcaaaatcgctcaaaaaaaagaggagggtgggtgcaaaatcgcataattaa 38191587  T
Q  103 caaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||  |||| | ||||||||||    
T  38191588 caaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 9412289 - 9412381
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  9412289 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagccta 9412381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 15567116 - 15567056
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    |||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15567116 ctcttttaatgctgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc 15567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3687653 - 3687710
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  3687653 gagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 13772898 - 13772955
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  13772898 gagggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 18925183 - 18925128
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaat 62  Q
    |||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  18925183 ctcttttaatgatgattttgaacaaaacacaattgacaaaatatggggtgcaaaat 18925128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 8953886 - 8953941
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  8953886 gagggggtgcaaaattgcacaattaacaaaagata-gggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 13772695 - 13772639
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||| |||||||| |||||||||||| |||||||| ||||||||||||    
T  13772695 ggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagccta 13772639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 3205093 - 3205148
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 17157021 - 17156966
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  17157021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 20419324 - 20419379
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  20419324 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 22740210 - 22740155
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  22740210 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 44600135 - 44600190
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  44600135 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 44599543 - 44599489
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  44599543 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 33628609 - 33628674
Alignment:
Q  1 tttcctctcttttattgatgattttg-aacaaaacacaattgacaaaagatagggtgcaaaatcgc 65  Q
    |||||||||||||| ||||||||||  ||||||| ||||||| |||||||| ||||||||||||||    
T  33628609 tttcctctcttttaatgatgattttttaacaaaaaacaattggcaaaagatggggtgcaaaatcgc 33628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 34235977 - 34236030
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaag 132  Q
    ||||||||||||||||||||||| ||||||||||  ||||||| ||||||||||    
T  34235977 gggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 5349733 - 5349784
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||||||||||||||||||   ||||| ||||||||||    
T  5349733 ggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 10533088 - 10533032
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  10533088 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 13863367 - 13863311
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||||||||||| ||||| | ||||||||||||    
T  13863367 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagccta 13863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 37889259 - 37889315
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  37889259 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 18864021 - 18863970
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||||||| |||||  ||||||||||||||| |||||||    
T  18864021 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 37972396 - 37972451
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| |||||||||||    
T  37972396 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 133
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  83 gtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    ||||||||||||||||||| | ||||||||||| ||||||| |||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 9035293 - 9035347
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  9035293 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35080076 - 35080023
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaa 61  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||    
T  35080076 ctcttttaatgatgattttgaacaaa-cacaattgtcaaaagatggggtgcaaaa 35080023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 37888887 - 37888833
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||||||    
T  37888887 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 79 - 133
Target Start/End: Complemental strand, 39983754 - 39983700
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagc 133  Q
    |||||||| |||||||| |||||| |||||||| ||||||||||| |||||||||    
T  39983754 gggggtgcgaaatcgcataattaataaaagataagggggaaaagtgcaattaagc 39983700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 5735553 - 5735598
Alignment:
Q  86 caaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaa 5735598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 9034922 - 9034865
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||| ||||||||||||  ||||  ||||||||||||||| ||||||||||||    
T  9034922 gggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagccta 9034865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 38826915 - 38826968
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||| |||||  ||||||||||||| | |||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 8643766 - 8643822
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||   |||||||||||  ||||||| ||||||||||||    
T  8643766 ggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagccta 8643822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||| ||||||||| ||||||||||||  ||||||| ||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 20418942 - 20418886
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  ||||||||||||||| ||||||| ||||    
T  20418942 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaaccta 20418886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 33628660 - 33628716
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||| ||||| ||||||    
T  33628660 ggggtgcaaaatcgcacaattagtaaaagatagagggaaaaagtgcaatttagccta 33628716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 34235810 - 34235762
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagat 50  Q
    |||| ||||||||  ||||||||||||||||||||||||| ||||||||    
T  34235810 ttcccctcttttaaagatgattttgaacaaaacacaattggcaaaagat 34235762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 35080223 - 35080259
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggg 116  Q
    |||||||||||||||||||||||||||||||| ||||    
T  35080223 ggggtgcaaaatcgcacaattaacaaaagataagggg 35080259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 5735474 - 5735533
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgct 66  Q
    |||||||| |||||||||||||||||| ||||||| ||| | ||  ||||||||||||||    
T  5735474 ctcttttaatgatgattttgaacaaaatacaattggcaagatatgaggtgcaaaatcgct 5735533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 120
Target Start/End: Original strand, 6908485 - 6908524
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaa 120  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaa 6908524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 13744233 - 13744287
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| |||||||||||    
T  13744233 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcct 13744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 13863964 - 13864011
Alignment:
Q  88 aaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||  ||||||||||||| ||||||| |||||||||||    
T  13863964 aaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 29292972 - 29292921
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||  ||||  ||||||||||||||| |||||||||||    
T  29292972 tgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 18864404 - 18864457
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||  ||||  ||||||| ||||||||||||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtacaattaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 48359373 - 48359320
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||    
T  48359373 ggggtgcaaaatcgcacaattgacaaactata-gggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||||| | ||||||| |||||||||| |||||||||| ||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatag-ggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 29292038 - 29292095
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    ||||||||| ||||||||||||||| |||||| ||| ||  |||||| ||||||||||    
T  29292038 gagggggtggaaaatcgcacaattagcaaaagttagaggaaaaaagtgcaattaagcc 29292095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  81 gggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||| | |||||||| |||||||||| |||||||||| ||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatag-ggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 40017447 - 40017495
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaa 131  Q
    |||| |||||| ||||||||| |||||||| |||||||||||||||||||    
T  40017447 ggtgtaaaatcacacaattaataaaagata-gggggaaaagtacaattaa 40017495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 42418639 - 42418590
Alignment:
Q  86 caaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||| ||||  |||||||||||||||  ||||||||||    
T  42418639 caaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 15567276 - 15567327
Alignment:
Q  82 ggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||   || ||||||||||||||||||||| ||||||| ||||    
T  15567276 ggtgcaaaatcgcac---tagcaaaagataggggggaaaagtgcaattaaaccta 15567327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  86 caaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  27096094 caaaatcgcacaattagcaaaatatagggggg-aaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  86 caaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  27182209 caaaatcgcacaattagcaaaatatagggggg-aaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 37972014 - 37971958
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||||||||  ||||  | ||||| ||||||| ||||||||||||    
T  37972014 ggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagccta 37971958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 46816311 - 46816367
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||||||||||||||| ||||   ||||||||| ||| |||||| ||||||||||||    
T  46816311 ggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaagccta 46816367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 76; Significance: 9e-35; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45669 - 45536
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||         ||||| ||||||||||||||||||    
T  45669 tttcccctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaatt 45570  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||| ||||||||||| |||||||||||    
T  45569 aacaaaagata-gggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 45771 - 45862
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||  ||||||||| ||||||||||| ||||||||||||    
T  45771 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagata-gggggaaaagtgcaattaagccta 45862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 2e-32; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 439122 - 439255
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||    
T  439122 tttcctctcttttaatgatgattttgaagaaaacacaattgacaaaagatggggtgcaaaatcgctc--aaaaaaagaggggatgcaaaatcgcacaatt 439219  T
Q  101 aacaaaagataggggggaaaagtacaattaagccta 136  Q
    | ||||||||| |||| |||||| ||||||||||||    
T  439220 agcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 2 - 131
Target Start/End: Complemental strand, 183495 - 183367
Alignment:
Q  2 ttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatta 101  Q
    |||| |||||||| |||||||||||||||||||||||||| ||||| ||  |||||||||||||||         ||| ||||||||||||| ||||||     
T  183495 ttcccctcttttaatgatgattttgaacaaaacacaattggcaaaatatgaggtgcaaaatcgctcaaaaaagaagagagggtgcaaaatcgtacaattg 183396  T
Q  102 acaaaagataggggggaaaagtacaattaa 131  Q
    |||||||||| ||||||||||| |||||||    
T  183395 acaaaagata-gggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 439019 - 438930
Alignment:
Q  45 aaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||| ||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  439019 aaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 183660 - 183717
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||||    
T  183660 gagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 183717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 17076 - 17209
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||||||||          |||| |||||||||| |||||||    
T  17076 tttcctctcttttaaggatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctcaaaaaaaaaagaggcggtgcaaaattgcacaat 17175  T
Q  100 taacaaaagataggggggaaaagtacaattaagcc 134  Q
    || ||||||||| ||||||||||| ||||||||||    
T  17176 tagcaaaagata-gggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 77 - 115
Target Start/End: Complemental strand, 16908 - 16870
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagatagggg 115  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  16908 gagggggtgcataatcgcacaattagcaaaagatagggg 16870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25200 - 25134
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25200 tttcctctcttttaatgatgattttgaacaaaacacaattgacaaaagatggggtgcaaaatcgctc 25134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 25333 - 25424
Alignment:
Q  44 aaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  25333 aaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 1704 - 1834
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc-nnnnnnnnngagggggtgcaaaatcgcacaat 99  Q
    ||||| |||||||| |||||||||| ||||||||||| ||| |||||||||||||||||||||||||          |||| ||||||||||||||||||    
T  1704 tttcccctcttttaatgatgattttaaacaaaacacagttggcaaaagatagggtgcaaaatcgctcaaaaagaaaagaggaggtgcaaaatcgcacaat 1803  T
Q  100 taacaaaagataggggggaaaagtacaattaa 131  Q
     ||||||||||| ||||||||||| |||||||    
T  1804 aaacaaaagata-gggggaaaagtgcaattaa 1834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 6731 - 6609
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaattaacaaa 106  Q
    |||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||          ||   ||||||||||| |||||||||||||    
T  6731 ctcttttaatgatgattttgaacaaaacacagttggcaaaagatagggtgcaaaatcgctaaaaaaaagaga---ggtgcaaaatcacacaattaacaaa 6635  T
Q  107 agataggggggaaaagtacaattaag 132  Q
    ||||||||||||| ||| ||||||||    
T  6634 agataggggggaacagtgcaattaag 6609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 10749 - 10690
Alignment:
Q  8 tcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctc 67  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  10749 tcttttaatgatgattttgaacaaaacacaattggcaaaagatggggtgcaaaatcgctc 10690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 205817 - 205686
Alignment:
Q  1 tttcctctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgctcnnnnnnnnngagggggtgcaaaatcgcacaatt 100  Q
    ||||| |||||||  | |||||||||||||||||||||||| ||||||||  |||||||||||| ||         ||||||||||||||||||||||||    
T  205817 tttcccctcttttgattatgattttgaacaaaacacaattggcaaaagatgaggtgcaaaatcgttc--aaaaaaagagggggtgcaaaatcgcacaatt 205720  T
Q  101 aacaaaagataggggggaaaagtacaattaagcct 135  Q
    | ||||||||| ||| ||||| | |||||||||||    
T  205719 agcaaaagata-gggagaaaaatgcaattaagcct 205686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 3)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 7552 - 7494
Alignment:
Q  7 ctcttttattgatgattttgaacaaaacacaattgacaaaagatagggtgcaaaatcgc 65  Q
    |||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  7552 ctcttttaatgatgattttgaacaaaacacaattggcaaacgatggggtgcaaaatcgc 7494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7597 - 7653
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||| |||||||||||||||| ||||||||| |||| |||||| ||||||||||    
T  7597 gagggggtacaaaatcgcacaattagcaaaagata-ggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 7508 - 7454
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||| ||||| ||||||||| |||| |||||| |||||||||||    
T  7508 ggggtgcaaaatcgcataattagcaaaagata-ggggaaaaagtgcaattaagcct 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 411979 - 411923
Alignment:
Q  77 gagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||| ||||||||||    
T  411979 gagggggtgcaaaatcgcacaattgacaaaagatag-ggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 380 - 329
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||||||||||||| |||||  ||||||||||||||| |||||||||||    
T  380 tgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 6206 - 6152
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||| ||||||||||||||| |||||||||| || ||||||| ||||||||||    
T  6206 ggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 6795 - 6849
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||||||||||| ||||| | ||||||||||    
T  6795 ggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 20043 - 20099
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagccta 136  Q
    |||| |||||||||||||||| |||||  ||| ||||||||||| ||||||||||||    
T  20043 ggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 10062 - 10011
Alignment:
Q  84 tgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||| ||||||  |||||||||||||| |||||| |||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcct 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 135
Target Start/End: Original strand, 38695 - 38750
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    |||||||||||||||||||||  ||||  |||||||| |||||| |||||||||||    
T  38695 ggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 185274 - 185328
Alignment:
Q  80 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcc 134  Q
    |||||||||||||||||||||  ||||  |||||| |||||||| ||||||||||    
T  185274 ggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 9960 - 9904
Alignment:
Q  79 gggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtacaattaagcct 135  Q
    ||||||| ||||||||||||||  ||||  |||||||| |||||| |||||||||||    
T  9960 gggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcct 9904  T

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