View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14078_low_8 (Length: 293)

Name: NF14078_low_8
Description: NF14078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14078_low_8
NF14078_low_8
[»] chr4 (7 HSPs)
chr4 (1-275)||(18731350-18731624)
chr4 (1-275)||(18699246-18699520)
chr4 (1-275)||(18723931-18724205)
chr4 (1-275)||(18679413-18679687)
chr4 (1-275)||(18655323-18655597)
chr4 (143-249)||(18073842-18073948)
chr4 (190-249)||(17989088-17989147)
[»] chr1 (3 HSPs)
chr1 (1-275)||(268203-268477)
chr1 (1-266)||(28127525-28127790)
chr1 (1-266)||(28164209-28164473)
[»] chr8 (1 HSPs)
chr8 (1-266)||(29273629-29273894)
[»] chr6 (67 HSPs)
chr6 (1-275)||(26646533-26646807)
chr6 (1-275)||(26752501-26752775)
chr6 (4-249)||(26056006-26056251)
chr6 (4-249)||(26075976-26076221)
chr6 (1-249)||(26656069-26656317)
chr6 (1-249)||(26762040-26762288)
chr6 (4-249)||(25579799-25580044)
chr6 (4-249)||(26142945-26143190)
chr6 (5-275)||(26823894-26824164)
chr6 (1-248)||(27337924-27338171)
chr6 (1-248)||(27398664-27398911)
chr6 (4-249)||(25538620-25538865)
chr6 (112-275)||(26623030-26623193)
chr6 (112-275)||(26729008-26729171)
chr6 (1-275)||(27718238-27718512)
chr6 (144-275)||(27593022-27593153)
chr6 (143-275)||(27679000-27679132)
chr6 (1-275)||(28781193-28781467)
chr6 (4-249)||(25481822-25482067)
chr6 (143-275)||(27611003-27611135)
chr6 (108-275)||(27724811-27724978)
chr6 (1-275)||(28786332-28786606)
chr6 (1-275)||(28792453-28792727)
chr6 (158-275)||(27677630-27677747)
chr6 (148-276)||(27604711-27604839)
chr6 (160-275)||(27706420-27706535)
chr6 (94-249)||(26048925-26049080)
chr6 (94-249)||(26070094-26070249)
chr6 (125-275)||(28139595-28139745)
chr6 (158-275)||(27698510-27698627)
chr6 (143-266)||(26802505-26802628)
chr6 (110-263)||(26937160-26937313)
chr6 (143-248)||(27531198-27531303)
chr6 (143-257)||(26884235-26884351)
chr6 (4-248)||(27214498-27214745)
chr6 (4-248)||(27234483-27234730)
chr6 (143-269)||(26861676-26861799)
chr6 (155-275)||(28227004-28227124)
chr6 (155-275)||(28242858-28242978)
chr6 (144-260)||(31284357-31284473)
chr6 (143-249)||(27427607-27427713)
chr6 (183-276)||(26341975-26342068)
chr6 (155-276)||(28149990-28150111)
chr6 (155-275)||(28181168-28181288)
chr6 (153-248)||(26848741-26848836)
chr6 (201-275)||(28234618-28234692)
chr6 (189-275)||(28297760-28297846)
chr6 (189-275)||(28514227-28514313)
chr6 (155-248)||(2184369-2184462)
chr6 (29-245)||(26949745-26949961)
chr6 (155-275)||(28185420-28185540)
chr6 (196-247)||(26975134-26975185)
chr6 (181-247)||(2184980-2185046)
chr6 (153-247)||(25071741-25071835)
chr6 (31-83)||(26617868-26617920)
chr6 (31-83)||(26723796-26723848)
chr6 (194-248)||(27665169-27665223)
chr6 (208-256)||(25506975-25507023)
chr6 (31-83)||(26811755-26811807)
chr6 (194-245)||(26635774-26635825)
chr6 (194-245)||(26741740-26741791)
chr6 (13-83)||(28297584-28297654)
chr6 (13-83)||(28514419-28514489)
chr6 (111-185)||(29826171-29826245)
chr6 (10-119)||(25506852-25506961)
chr6 (199-248)||(28098426-28098475)
chr6 (197-245)||(26959250-26959298)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-275)||(4530-4804)
scaffold0277 (1-275)||(13491-13765)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-275)||(7579-7853)
[»] scaffold0349 (2 HSPs)
scaffold0349 (108-275)||(14322-14488)
scaffold0349 (143-275)||(3422-3555)
[»] scaffold0038 (3 HSPs)
scaffold0038 (155-275)||(27502-27622)
scaffold0038 (155-275)||(43020-43140)
scaffold0038 (155-275)||(34779-34899)
[»] scaffold0003 (1 HSPs)
scaffold0003 (143-249)||(59650-59756)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-275)||(58251-58415)
[»] chr2 (2 HSPs)
chr2 (194-254)||(3279763-3279823)
chr2 (194-247)||(17993736-17993789)
[»] chr5 (1 HSPs)
chr5 (144-260)||(16689080-16689196)


Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18731350 - 18731624
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18731350 tggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttttgtgcttag 18731449  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18731450 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18731549  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18731550 catgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 18731624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18699246 - 18699520
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18699246 tggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttccgtgcttag 18699345  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||    
T  18699346 tgagatgttcaccataactcccactttgatgtcgtatgtgagtaggatctacgccatagaaaacaggcaaaacgagacgaccttttgtcttgtagcagtg 18699445  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18699446 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 18699520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18723931 - 18724205
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  18723931 tggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactcattttgtgcttag 18724030  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18724031 tgagatgttcaccataactcccactttggtgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18724130  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
     |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18724131 catgatgtggacaagttcgttcaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 18724205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18679413 - 18679687
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  18679413 tggtagccggacaagttagcagcttcggtcagagctaacttccattgatgcaaccgctccatgtttttattgttattttggaaactctttcagtgattag 18679512  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  18679513 tgagatgttcaccataactaccactttgatgtcatatgtgagtaggatccacgacatagaaaacaggcaaaacaagacgaccctttgtcttgtagcagtg 18679612  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18679613 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 18679687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 18655323 - 18655597
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18655323 tggtagccggacaagttagcagcttcggtcagagccaacttccattgatgcaaccgctccatgtttttcttgttattttggaaattctttctgtgcttag 18655422  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||    
T  18655423 tgagatgttcaccataacttccagtttgatgtcgtatgtgagtaggatccacgccatagaaaacaggaaaaacgagacgaccctttgtcttgtagcagtg 18655522  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18655523 aatgatgcggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcct 18655597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 18073948 - 18073842
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||| ||| |||||||||||||||| || | |||||| || |||||||| ||||||||||| ||||||  |||||||||| |||||||||| ||    
T  18073948 taggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgc 18073849  T
Q  243 atagttg 249  Q
    |||||||    
T  18073848 atagttg 18073842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 17989088 - 17989147
Alignment:
Q  190 ttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||||| ||||||||||| ||||||  |||||||||| |||||||||| |||||||||    
T  17989088 ttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgcatagttg 17989147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 268203 - 268477
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||| |||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||    
T  268203 tggtagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgctccatgtttttcttgctattttggaaactctcttcgtgcttag 268302  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||  |||||||||||| |||||||||| ||    
T  268303 tgagatgttcaccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacgggcaaaatgagacgaccctttttcttgtagcagtg 268402  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  268403 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 268477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 28127525 - 28127790
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  || ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||  |||||||    
T  28127525 tggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctctccatgcttag 28127624  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
      || | |||||||||||||||  | |||| ||| |  | | |||||||||||||| |||||||||||||||| || |||||||||||||||||||| ||    
T  28127625 caagctcttcaccataactccctgtatgatatcgcacatcagtaggatccacgccaaagaaaacaggcaaaactaggcgaccctttgtcttgtagcagtg 28127724  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaat 266  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  28127725 aatgatgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaat 28127790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 28164209 - 28164473
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  || ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||| ||||  |  |||||||    
T  28164209 tggtagccggacaagttagcagcttgggttagagctatcttccattggtgcaatcgctccatgtttttcttgttattttggaacctctcaccatgcttag 28164308  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    | |||| ||  |||||||||||  | |||||||| |  | | |||||||||||||| |||||||||||||||| || |||||||||||||||||||| ||    
T  28164309 taagatctttgccataactccctgtatgatgtcgcacatcagtaggatccacgcca-agaaaacaggcaaaactaggcgaccctttgtcttgtagcagtg 28164407  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaat 266  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28164408 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaat 28164473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 29273629 - 29273894
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||| |||||||||| |||||  |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |  || |||||    
T  29273629 tggtagccagacaagttagaagcttgggtcagagccaacttccattgatgcaaccgatccatgtttttcttgctattttggaaactctcttcgtacttag 29273728  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| ||    
T  29273729 tgagatgttcaccataactcccactttgatgtcgtatgtgagtaggatccacgccatagaagacaggcaaaatgagacgaccctttgtcttgtagcagtg 29273828  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaat 266  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29273829 aatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaat 29273894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 26646807 - 26646533
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||| |  ||||||||    
T  26646807 tggtatccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttag 26646708  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26646707 tgagatgttcaccataactcccactttgatgccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatg 26646608  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||    
T  26646607 aatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcct 26646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 26752775 - 26752501
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||| |  ||||||||    
T  26752775 tggtatccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgttccttgtttttcttgttattttggaaactctcttcgtgcttag 26752676  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    ||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26752675 tgagatgttcaccataactcccactttgatgccgtatctgagtaggatccacgccatagaaaacgggcaaaacgagacgaccctttgtcttgtagcaatg 26752576  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| || |||||    
T  26752575 aatgatgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcct 26752501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 26056251 - 26056006
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||| |||| |||||||||||||||| |||||||||||| | || | | |||||||| |    
T  26056251 tagccggacaagttagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctctttatgcttagtaa 26056152  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||  |||||||||| ||||| || |  | || |||||| |||||||| |||||    
T  26056151 gatgctcaccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaat 26056052  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  26056051 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26056006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 26076221 - 26075976
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    |||||||||||||||||||||| ||| ||||| | |||||||||| |||| |||||||||||||||| |||||||||||| | || | | |||||||| |    
T  26076221 tagccggacaagttagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctctttatgcttagtaa 26076122  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||  |||||||||| ||||| || |  | || |||||| |||||||| |||||    
T  26076121 gatgctcaccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtgttgtagcagtgaat 26076022  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  26076021 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26075976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 26656317 - 26656069
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||| |||||||| |||||||  |||||||| | ||||||||| | ||||| || |||||||| |||||||||||||||  |||||   |||||||    
T  26656317 tggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgcttag 26656218  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    | ||||| ||||| ||||| ||| | ||||||||||||||| |||||||||| ||||||||||||||||||||   || |||||||||||| ||||||||    
T  26656217 taagatgctcaccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatg 26656118  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26656117 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26656069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 26762288 - 26762040
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||| |||||||| |||||||  |||||||| | ||||||||| | ||||| || |||||||| |||||||||||||||  |||||   |||||||    
T  26762288 tggtagccagacaagttggcagctttggtcagagccatcttccattgctccaacctctgcatgttttccttgttattttggaacttcttttcatgcttag 26762189  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    | ||||| ||||| ||||| ||| | ||||||||||||||| |||||||||| ||||||||||||||||||||   || |||||||||||| ||||||||    
T  26762188 taagatgctcaccgtaacttccagtctgatgtcgtatgtgagtaggatccacaccatagaaaacaggcaaaaccgaacaaccctttgtcttatagcaatg 26762089  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26762088 aatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26762040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 25580044 - 25579799
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||||||||||||||||||||  || ||||||| |||||||||| |||| |||||||||||||||| ||||||||| || |||| |   |||||||| |    
T  25580044 tagccggacaagttagcagcttgggtaagagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaa 25579945  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
    |||  ||||||||||||||||| ||||||||||||||| |||| |||||  |||||||||| ||||| || |  | || ||||||||||||||| |||||    
T  25579944 gatactcaccataactcccactctgatgtcgtatgtgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaat 25579845  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  25579844 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 25579799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 26143190 - 26142945
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||||||||||||||||||||   | ||||||| |||||||||| |||| |||||||||||||||| ||||||||| || |||| |   |||||||| |    
T  26143190 tagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgtttttctcgttattttgaaacctctcttcatgcttagtaa 26143091  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
    |||| ||||||||| ||||||| |||| |||||||||| |||| |||||  |||||||||| || || || |  | || ||||||||||||||| |||||    
T  26143090 gatgctcaccataaatcccactctgatttcgtatgtgagtaggttccacatcatagaaaacgggaaatactaagcaactctttgtcttgtagcagtgaat 26142991  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  26142990 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26142945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 275
Target Start/End: Complemental strand, 26824164 - 26823894
Alignment:
Q  5 agccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtgag 104  Q
    |||| ||||||| ||||||||   |||||||   |||||||||| ||||   ||||||||||| ||||||||||  ||| ||||||   |||||||||||    
T  26824164 agccagacaagtcagcagcttgtttcagagccttcttccattgaagcaatttctccatgttttccttgttatttccgaacctcttttcatgcttagtgag 26824065  T
Q  105 atgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatg 204  Q
    ||||  | ||||||||||||  ||||||||||||| || ||||||||| |||||||||||||||||||| || || ||||||  |||||||    |||||    
T  26824064 atgtatagcataactcccacgctgatgtcgtatgtcaccaggatccacaccatagaaaacaggcaaaacgaggcgccccttttccttgtagacgcgaatg 26823965  T
Q  205 atgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| || |||||    
T  26823964 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcct 26823894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 27337924 - 27338171
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||| |||||| |||||||||||||  || ||||| | ||||||||  | ||||| ||||||||||| |||||||||||||||  | | |   |||||||    
T  27337924 tggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttag 27338023  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    | ||||| ||||||||||||||| | |||||||||| |||| |||||||| | ||||||||||||||||||||   || |||| ||||||||||||| ||    
T  27338024 taagatgctcaccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtg 27338123  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  27338124 aatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtt 27338171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 27398664 - 27398911
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||| |||||| |||||||||||||  || ||||| | ||||||||  | ||||| ||||||||||| |||||||||||||||  | | |   |||||||    
T  27398664 tggtggccggagaagttagcagcttgggtaagagccatcttccatttcttcaacctctccatgttttccttgttattttggaacttatcttcatgcttag 27398763  T
Q  101 tgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    | ||||| ||||||||||||||| | |||||||||| |||| |||||||| | ||||||||||||||||||||   || |||| ||||||||||||| ||    
T  27398764 taagatgctcaccataactcccagtctgatgtcgtacgtgagtaggatccgcaccatagaaaacaggcaaaaccgaacaaccccttgtcttgtagcagtg 27398863  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  27398864 aatgatgtggacaagttcgtccaagcaaaatgaagaagatgcatagtt 27398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 25538865 - 25538620
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||||||||||||||||||||   | ||||||| |||||||||| |||| ||||||||||||||||  |||||||| || |||| |   |||||||| |    
T  25538865 tagccggacaagttagcagcttggataagagctatcttccattgacgcaatcgctccatgtttttctcattattttgaaacctctcttcatgcttagtaa 25538766  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
     ||| ||||||||||||||||| ||||||||||  ||| |||| |||||  |||||||||| ||||| || |  | || ||||||||||||||| |||||    
T  25538765 aatgctcaccataactcccactctgatgtcgtaactgagtaggttccacatcatagaaaacgggcaatactaagcaactctttgtcttgtagcagtgaat 25538666  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    ||| || ||||||||||||||||||||||||||||| |||||||||    
T  25538665 gatctggacaagttcgtccaaacaaaatgaagaagatgcatagttg 25538620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 112 - 275
Target Start/End: Complemental strand, 26623193 - 26623030
Alignment:
Q  112 ccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaa 211  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| |    
T  26623193 ccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtgga 26623094  T
Q  212 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||| |||||||||||||||||| | |||||||||  ||||||||||||||| || |||||    
T  26623093 caagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcct 26623030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 112 - 275
Target Start/End: Complemental strand, 26729171 - 26729008
Alignment:
Q  112 ccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaa 211  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||||| |    
T  26729171 ccataactcccagtttgatgccgtatgtgagtaggatccacgccatagaagacgggcaaaacgagacgaccctttgttttgtagcagtgaatgatgtgga 26729072  T
Q  212 caagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||| |||||||||||||||||| | |||||||||  ||||||||||||||| || |||||    
T  26729071 caagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcct 26729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 27718238 - 27718512
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    ||||||||||||||||||||||| |   ||||||| |  |||||| | ||||||| ||||||||| ||||| | |||||| || ||||||   |||| ||    
T  27718238 tggtagccggacaagttagcagcctggctcagagccactttccatcgctgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcag 27718337  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||| ||  | |||||||| | || | |||| ||||||||  |||||||||||||||| || |||||||||||||||||||| |    
T  27718338 cca-atgcttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 27718436  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  27718437 gaattatgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcct 27718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 275
Target Start/End: Original strand, 27593022 - 27593153
Alignment:
Q  144 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggca 243  Q
    ||||||||| ||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  27593022 aggatccacaccaaagaaaacaggcaaaacagggcgaccctttgtcttgtagcaatgaatgatgtggtcaagttcgtccaaacaaaacgaagaagaggca 27593121  T
Q  244 tagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||||||||||||||||| || |||||    
T  27593122 tagttgatagaaaacacaggaataaaaatcct 27593153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 143 - 275
Target Start/End: Complemental strand, 27679132 - 27679000
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||| ||| |||||||||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  27679132 taggttccacaccaaagaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggc 27679033  T
Q  243 atagttgatagaaaacacaggaatgaagatcct 275  Q
    |||||||||||||||||||||||| || |||||    
T  27679032 atagttgatagaaaacacaggaataaaaatcct 27679000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28781467 - 28781193
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||| | ||| | |||||| || ||||||   ||   ||    
T  28781467 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgtccag 28781368  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| ||||||||||   ||  | |||||||| |  | | |||||||||| ||| |||||||||||||||| || ||||| ||||||||||||||||    
T  28781367 cca-atgcttcaccataaggacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28781269  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||||||||||||||||||| ||||||   |||| ||||||||||||||||||||||||||| || |||||    
T  28781268 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcct 28781193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 249
Target Start/End: Complemental strand, 25482067 - 25481822
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||||||||| |||||||||| ||| ||||| | |||||||||| |||| |||||||||||||||| |||||||||||| | || |   |||||||| |    
T  25482067 tagccggacaaattagcagcttgagtaagagccatcttccattgacgcaatcgctccatgtttttctcgttattttggaacccctcttcatgcttagtca 25481968  T
Q  104 gatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaat 203  Q
    ||| |||||||||||| |   | ||| |||| |  | | |||||||||| ||||||||||| || || || |  | || ||||||||||||||| |||||    
T  25481967 gatattcaccataactacatgtatgacgtcgaacatcagtaggatccacaccatagaaaacgggtaatactaagcaactctttgtcttgtagcagtgaat 25481868  T
Q  204 gatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||    
T  25481867 gatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 25481822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 27611003 - 27611135
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||||||  |||||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||    
T  27611003 taggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatgtggacaagttcgtccaaacaaaacgaagaagaggc 27611102  T
Q  243 atagttgatagaaaacacaggaatgaagatcct 275  Q
    |||||||||||||||||||||||| || |||||    
T  27611103 atagttgatagaaaacacaggaataaaaatcct 27611135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 27724811 - 27724978
Alignment:
Q  108 ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatg 207  Q
    |||||||||||| ||  | |||||||| | || | |||| ||||||||  |||||||||||||||| || |||||||||||||||||||| ||||| |||    
T  27724811 ttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatg 27724910  T
Q  208 tgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    || |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| || |||||    
T  27724911 tggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcct 27724978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28786606 - 28786332
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||| | ||| | |||||| || ||||||   |||  ||    
T  28786606 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgcccag 28786507  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||  ||  | |||||||| |  | | ||||||| || ||| |||||||||||||||| || ||||| ||||||||||||||||    
T  28786506 cca-atgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28786408  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||||||||||||||||||| ||||||   || | ||| ||||||||||||||||||||||| || |||||    
T  28786407 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcct 28786332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 28792727 - 28792453
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||| | ||| | |||||| || ||||||   |||  ||    
T  28792727 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttatccttatcattttgaaacctcttttcatgcccag 28792628  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||  ||  | |||||||| |  | | ||||||| || ||| |||||||||||||||| || ||||| ||||||||||||||||    
T  28792627 cca-atgcttcaccataacgacctgtatgatgtcgcacattagtaggatcgacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 28792529  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||||||||||||||||||| ||||||   || | ||| ||||||||||||||||||||||| || |||||    
T  28792528 gaataatgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcct 28792453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 27677630 - 27677747
Alignment:
Q  158 agaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 257  Q
    |||||||||||| ||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27677630 agaaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 27677729  T
Q  258 cacaggaatgaagatcct 275  Q
    ||||| ||| || |||||    
T  27677730 cacagcaataaaaatcct 27677747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 27604711 - 27604839
Alignment:
Q  148 tccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagt 247  Q
    ||||| ||| |||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |    
T  27604711 tccacaccaaagaaaacaggcaaaacgacgcgaccctttgtcgtgtagcaatgaatgatgtgaacaagttcatccaaacaaaaggaagaagaggcatatt 27604810  T
Q  248 tgatagaaaacacaggaatgaagatcctg 276  Q
    ||||||||||||||||||| || ||||||    
T  27604811 tgatagaaaacacaggaataaaaatcctg 27604839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 160 - 275
Target Start/End: Original strand, 27706420 - 27706535
Alignment:
Q  160 aaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaaca 259  Q
    |||||||||| ||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27706420 aaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaaca 27706519  T
Q  260 caggaatgaagatcct 275  Q
    ||||||| || |||||    
T  27706520 caggaataaaaatcct 27706535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 26049080 - 26048925
Alignment:
Q  94 tgcttagtgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgt 193  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||||||| |||| |||||  |||| ||||| ||||| || |  | || |||||||||||    
T  26049080 tgcttagtaagatgctcaccataacttccactatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgt 26048981  T
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26048980 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26048925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 249
Target Start/End: Complemental strand, 26070249 - 26070094
Alignment:
Q  94 tgcttagtgagatgttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgt 193  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||||||| |||| |||||  |||| ||||| ||||| || |  | || |||||||||||    
T  26070249 tgcttagtaagatgctcaccataacttccactatgatgtcgtatgtgagtaggttccacatcataaaaaacgggcaatactaagcaactctttgtcttgt 26070150  T
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttg 249  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  26070149 agcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttg 26070094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 125 - 275
Target Start/End: Complemental strand, 28139745 - 28139595
Alignment:
Q  125 tttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaa 224  Q
    |||||||||| ||||||  ||||||||| |||||||||||||||||||| | ||  |||||||| ||| |||| | ||||||||| ||||||||||||||    
T  28139745 tttgatgtcgaatgtgagaaggatccacaccatagaaaacaggcaaaaccaaacatccctttgtgttgaagcagtcaatgatgtggacaagttcgtccaa 28139646  T
Q  225 acaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
     ||||| |||||||||||||||||||| ||||||||||| ||||| |||||    
T  28139645 gcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcct 28139595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 275
Target Start/End: Original strand, 27698510 - 27698627
Alignment:
Q  158 agaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaa 257  Q
    |||||||||||||||| || ||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  27698510 agaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaattatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaa 27698609  T
Q  258 cacaggaatgaagatcct 275  Q
    ||||||||| || |||||    
T  27698610 cacaggaataaaaatcct 27698627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 26802628 - 26802505
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||||||||| ||| |||||| |||||| || || |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||   ||||||||    
T  26802628 taggatccacaccaaagaaaataggcaagacgaggcgaccctttgtcttatagcaatgaataatgtgaacaagttcgtccaagcaaaattttgaagaggc 26802529  T
Q  243 atagttgatagaaaacacaggaat 266  Q
    ||||||||||||||||||||||||    
T  26802528 atagttgatagaaaacacaggaat 26802505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 263
Target Start/End: Complemental strand, 26937313 - 26937160
Alignment:
Q  110 caccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtg 209  Q
    |||||||||||||| |||| ||||| | ||||  |||||||||  ||||||||| ||||||||  ||| |||| ||||||||| |||| | || ||||||    
T  26937313 caccataactcccagtttggtgtcgaacgtgagaaggatccacttcatagaaaataggcaaaattagatgaccttttgtcttgaagcagtcaacgatgtg 26937214  T
Q  210 aacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagg 263  Q
     |||||||||||||||||||||||||||| ||||||||||||||| || |||||    
T  26937213 gacaagttcgtccaaacaaaatgaagaagtggcatagttgatagagaatacagg 26937160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 27531198 - 27531303
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||||||||| |||   ||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  27531198 taggatccacaccaataaaaacaggcaaaacaagacaaccctttgtatcgtagcaatgagtgatgtgaacaagttcgtccaaacaaaatgaagaagatgc 27531297  T
Q  243 atagtt 248  Q
    ||||||    
T  27531298 atagtt 27531303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 26884351 - 26884235
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatga--tgtgaacaagttcgtccaaacaaaatgaagaagag 240  Q
    |||||||||| |||   |||||||||||||| || ||||||||||||| |||||| |||||||  |||| |||||||||||||||||||||||||||||     
T  26884351 taggatccacaccaacaaaaacaggcaaaacgaggcgaccctttgtctcgtagcagtgaatgacatgtggacaagttcgtccaaacaaaatgaagaagat 26884252  T
Q  241 gcatagttgatagaaaa 257  Q
    ||||||||| |||||||    
T  26884251 gcatagttggtagaaaa 26884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 27214745 - 27214498
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||| || |||||||||||||   | ||||||| ||||||||  ||||||||||||||||||| |||||||||||| || |||| |   |||||||  |    
T  27214745 tagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaa 27214646  T
Q  104 gatgttcaccataactcccacttt---gatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    |   ||||||||||||     | |   ||||||| | ||||  ||| || ||||||||||||||||| | |||||| ||||| |||  |||| |||||||    
T  27214645 gcgcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatg 27214546  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    | ||||||| ||||||||||||||||||||||||||||  ||||||||    
T  27214545 agtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 27234483 - 27234730
Alignment:
Q  4 tagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtga 103  Q
    ||||| || |||||||||||||   | ||||||| ||||||||  ||||||||||||||||||| |||||||||||| || |||| |   |||||||  |    
T  27234483 tagccagataagttagcagcttggttaagagctatcttccatttctgcaaccgctccatgttttccttgttattttgaaacctctcttcatgcttagcaa 27234582  T
Q  104 gatgttcaccataactcccacttt---gatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatg 200  Q
    |   ||||||||||||     | |   ||||||| | ||||  ||| || ||||||||||||||||| | |||||| ||||| |||  |||| |||||||    
T  27234583 gcgcttcaccataactgttgttgttcagatgtcgcaagtgagaaggttcaacgccatagaaaacaggtagaacaaggcgacctttttccttggagcaatg 27234682  T
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    | ||||||| ||||||||||||||||||||||||||||  ||||||||    
T  27234683 agtgatgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 143 - 269
Target Start/End: Complemental strand, 26861799 - 26861676
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    ||||||||| ||||||||||||||||||||| |  |||||||||  |||| ||   | |||||| || |||||||| |||||||||||||| ||||||||    
T  26861799 taggatccatgccatagaaaacaggcaaaacgacgcgacccttttccttgcag---ttaatgatttggacaagttcatccaaacaaaatgacgaagaggc 26861703  T
Q  243 atagttgatagaaaacacaggaatgaa 269  Q
    |||||||  ||||||||||||||||||    
T  26861702 atagttggcagaaaacacaggaatgaa 26861676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 28227124 - 28227004
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  ||||||||||| || |  |||  |||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  28227124 catagaaaattggcaaaacaaggcgccgattttccttgaagcaatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28227025  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || ||||||||||| |||||    
T  28227024 caagacaggaatgaaaatcct 28227004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 28242978 - 28242858
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  |||||||| || || || ||| ||||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  28242978 catagaaaattggcaaaactaggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28242879  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || ||||||||||| |||||    
T  28242878 caagacaggaatgaaaatcct 28242858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 31284473 - 31284357
Alignment:
Q  144 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggca 243  Q
    ||||||||||||| ||||||| |||||||| || ||||| |||  ||| ||  | ||||||||||| |||||||||||||||||||| || |||||||||    
T  31284473 aggatccacgccaaagaaaacgggcaaaacgaggcgaccattttgcttatacaagtgaatgatgtggacaagttcgtccaaacaaaacgacgaagaggca 31284374  T
Q  244 tagttgatagaaaacac 260  Q
    ||||||  |||||||||    
T  31284373 tagttggcagaaaacac 31284357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 249
Target Start/End: Original strand, 27427607 - 27427713
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||| ||| |||||||||||||||| || | |||||| || |||||||| ||||||||||| ||||||  |||||||||| |||||||||| ||    
T  27427607 taggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgc 27427706  T
Q  243 atagttg 249  Q
    |||||||    
T  27427707 atagttg 27427713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 276
Target Start/End: Original strand, 26341975 - 26342068
Alignment:
Q  183 ctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctg 276  Q
    ||||| |||| |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| || || |  |||||||| ||||||    
T  26341975 ctttgccttgaagcaatgaatgatgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctg 26342068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 276
Target Start/End: Complemental strand, 28150111 - 28149990
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    ||||||||| ||||| ||| |  | |||||||| |||| |||| ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||||    
T  28150111 catagaaaataggcagaactaagcaaccctttgccttgaagcagtgaataatgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgataga 28150012  T
Q  255 aaacacaggaatgaagatcctg 276  Q
     || |  |||||||| ||||||    
T  28150011 gaagattggaatgaaaatcctg 28149990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 28181288 - 28181168
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  |||||||| ||||| ||  ||  |||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  28181288 catagaaaattggcaaaactagacgcccgctttccttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28181189  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || || |||||||| |||||    
T  28181188 caagacgggaatgaaaatcct 28181168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 248
Target Start/End: Complemental strand, 26848836 - 26848741
Alignment:
Q  153 gccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    ||||||||||||||| | ||| |  | |||||||  |||| |||||||||||||||| |||||||||||||||||||| ||||||| |||||||||    
T  26848836 gccatagaaaacaggaataaccatgctacccttttccttggagcaatgaatgatgtggacaagttcgtccaaacaaaacgaagaagtggcatagtt 26848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 28234692 - 28234618
Alignment:
Q  201 aatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||| |||||||| || ||||||||||| |||||    
T  28234692 aatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcct 28234618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Original strand, 28297760 - 28297846
Alignment:
Q  189 cttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||| |||| || ||||||||||| |||||    
T  28297760 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcct 28297846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 28514313 - 28514227
Alignment:
Q  189 cttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||| |||| || ||||||||||| |||||    
T  28514313 cttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcct 28514227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 2184462 - 2184369
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    |||||||||| || | ||| || || ||||||| |||| || || |||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  2184462 catagaaaactggtagaaccaggcgtccctttgacttggagtaacgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagtt 2184369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 245
Target Start/End: Complemental strand, 26949961 - 26949745
Alignment:
Q  29 tcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtgagatgttcaccataactcccactttg 128  Q
    ||||||||| ||||||||   ||||||||||||||||||| ||| | |||||||| |||| |   |||||||  ||   ||||||||||||   | | ||    
T  26949961 tcagagctatcttccatttcagcaaccgctccatgttttttttgctcttttggaacctctcttcatgcttagcaagtgcttcaccataactataattctg 26949862  T
Q  129 atgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaa 228  Q
    |||||| | ||||  ||| || ||  |||||||||| |||| |||||| ||||| |||  |||| || | |||||||| || ||||||||||| ||||||    
T  26949861 atgtcgcacgtgagaaggttctacatcatagaaaactggcagaacaaggcgacctttttccttgaagtagtgaatgatatggacaagttcgtctaaacaa 26949762  T
Q  229 aatgaagaagaggcata 245  Q
    ||||||||||| |||||    
T  26949761 aatgaagaagaagcata 26949745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 28185540 - 28185420
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  |||||||| ||||| ||  ||  |||| |||| | ||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  28185540 catagaaaattggcaaaactagacgcccgctttccttgaagcagttaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 28185441  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || || |||||||| |||||    
T  28185440 caagacgggaatgaaaatcct 28185420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 26975185 - 26975134
Alignment:
Q  196 caatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagt 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  26975185 caatgaatgatgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 2185046 - 2184980
Alignment:
Q  181 ccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagt 247  Q
    ||||||| |||| ||||| ||||||| || ||||||||||||||||||||||||||||| |||||||    
T  2185046 ccctttgacttggagcaacgaatgatatggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 25071835 - 25071741
Alignment:
Q  153 gccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagt 247  Q
    |||||||||||  || | |||||| |||| ||||  |||| || | ||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  25071835 gccatagaaaattggtagaacaaggcgactcttttccttgaagtagtgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 26617920 - 26617868
Alignment:
Q  31 agagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaa 83  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||||||||    
T  26617920 agagctatcttccatttctgcaaccgctccatgttttccttgttattttggaa 26617868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 26723848 - 26723796
Alignment:
Q  31 agagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaa 83  Q
    ||||||| ||||||||  ||||||||||||||||||| |||||||||||||||    
T  26723848 agagctatcttccatttctgcaaccgctccatgttttccttgttattttggaa 26723796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 27665169 - 27665223
Alignment:
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    |||||||||||||||| |||||||| || ||||||||||||||||  ||||||||    
T  27665169 agcaatgaatgatgtggacaagttcatctaaacaaaatgaagaagtagcatagtt 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 25506975 - 25507023
Alignment:
Q  208 tgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaa 256  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||    
T  25506975 tgaacaagttcctccaaacaaaattttgaagaggcatagttgatagaaa 25507023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 26811807 - 26811755
Alignment:
Q  31 agagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaa 83  Q
    ||||||| ||||||||  |||||||| |||||||||| |||||||||||||||    
T  26811807 agagctatcttccatttctgcaaccgatccatgttttccttgttattttggaa 26811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 26635825 - 26635774
Alignment:
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcata 245  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||| |||||    
T  26635825 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26635774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 26741791 - 26741740
Alignment:
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcata 245  Q
    |||||||||||||||| |||||||| |||||||||||  ||||||| |||||    
T  26741791 agcaatgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcata 26741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 28297584 - 28297654
Alignment:
Q  13 aagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaa 83  Q
    |||||||||| || ||| |||||   ||||||||  ||||||| ||||||||| |||||||||||||||||    
T  28297584 aagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaa 28297654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 28514489 - 28514419
Alignment:
Q  13 aagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaa 83  Q
    |||||||||| || ||| |||||   ||||||||  ||||||| ||||||||| |||||||||||||||||    
T  28514489 aagttagcagtttgagtaagagcactcttccatttctgcaacctctccatgttattcttgttattttggaa 28514419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 29826245 - 29826171
Alignment:
Q  111 accataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctt 185  Q
    ||||||||||||| | |||||||| |  |||  |||||||||  ||||||||| ||||||||| |||||||||||    
T  29826245 accataactcccagtctgatgtcgcacatgagaaggatccacatcatagaaaataggcaaaacgagacgaccctt 29826171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 25506852 - 25506961
Alignment:
Q  10 gacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttagtgagatgtt 109  Q
    |||| |||||||| ||  || |||||||  |||||||||||| | | ||||||||||||||| |||||||| ||  ||| |   |||||||| |||| ||    
T  25506852 gacaggttagcagattgtgttagagctattttccattgatgcgatctctccatgtttttcttattattttgaaacttctcttcatgcttagtcagatctt 25506951  T
Q  110 caccataact 119  Q
    ||||||||||    
T  25506952 caccataact 25506961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Original strand, 28098426 - 28098475
Alignment:
Q  199 tgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagtt 248  Q
    ||||||||||| |||||||| |||||||||||  ||||||| ||||||||    
T  28098426 tgaatgatgtggacaagttcatccaaacaaaacaaagaagaagcatagtt 28098475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 26959298 - 26959250
Alignment:
Q  197 aatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcata 245  Q
    ||||||||||||| |||||||| |||||| |||| |||||||| |||||    
T  26959298 aatgaatgatgtggacaagttcatccaaataaaacgaagaagaagcata 26959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 4530 - 4804
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||||| ||||||||| ||||| | |||||| || ||||||   |||| ||    
T  4530 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaacctctccatgttattcttatcattttgaaacctcttttcatgctcag 4629  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||| ||  |  ||||||| | || | |||| ||||||||  |||||||||||||||| || |||||||||||||||||||| |    
T  4630 cca-atgcttcaccataactacctttcagatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagt 4728  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| ||||| |||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| || |||||    
T  4729 gaattatgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcct 4804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 13491 - 13765
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| ||||| | |||||| || ||||||   ||   ||    
T  13491 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtccag 13590  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||  ||  | |||||||| |  | | |||||||||| ||| |||||||||||||||| || ||||| ||||||||||||||||    
T  13591 cca-atgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttttgtcttgtagcaat 13689  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||||||||||||||||||| ||||||   |||| ||| ||||||||||||||||||||||| || |||||    
T  13690 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcct 13765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 7853 - 7579
Alignment:
Q  1 tggtagccggacaagttagcagcttcagtcagagctaacttccattgatgcaaccgctccatgtttttcttgttattttggaaactctttctgtgcttag 100  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||||| ||||| | |||||| || ||||||   ||   ||    
T  7853 tggtagccggacaagttagcagcttgggtcagagccaacttccattgatgcaatcgctccatgttattcttatcattttgaaacctcttttcatgtccag 7754  T
Q  101 tgagatg-ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaat 199  Q
      | ||| |||||||||||  ||  | |||||||| |  | | |||||||||| ||| |||||||||||||||| || ||||| | ||||||||||||||    
T  7753 cca-atgcttcaccataacgacctgtatgatgtcgcacattagtaggatccacaccaaagaaaacaggcaaaacgaggcgaccttctgtcttgtagcaat 7655  T
Q  200 gaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||| |||||||||||||||||||| ||||||   |||| ||| ||||||||||||||||||||||| || |||||    
T  7654 gaataatgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcct 7579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 14322 - 14488
Alignment:
Q  108 ttcaccataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatg 207  Q
    |||||||||||| ||  | |||||||| | || | |||| ||||||||  |||||||||||||||| || |||||||||||||||||||| ||||| |||    
T  14322 ttcaccataactacctttctgatgtcgcacgttagtaggttccacgccgaagaaaacaggcaaaacgaggcgaccctttgtcttgtagcagtgaattatg 14421  T
Q  208 tgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    || |||||||||||||||||||| |||||| |||||||||||||||||||||||||||| || |||||    
T  14422 tggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcct 14488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 143 - 275
Target Start/End: Original strand, 3422 - 3555
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||| ||| | |||||||||| ||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  3422 taggttccacaccaaataaaacaggcagaacgaggcgaccctttgtcttgtagcagtgaatgatgtggacaagttcgtccaaacaaaatgaagaagaggc 3521  T
Q  243 ata-gttgatagaaaacacaggaatgaagatcct 275  Q
    ||| ||||||||||||||||||||| || |||||    
T  3522 ataggttgatagaaaacacaggaataaaaatcct 3555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 27622 - 27502
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  ||||||||||| || |  |||  |||| |||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  27622 catagaaaattggcaaaacaaggcgccgattttccttgaagcaatgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 27523  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || ||||||||||| |||||    
T  27522 caagacaggaatgaaaatcct 27502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 43140 - 43020
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  |||||||| || || || ||| ||||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  43140 catagaaaattggcaaaactaggcgtccatttttcttgcagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 43041  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || ||||||||||| |||||    
T  43040 caagacaggaatgaaaatcct 43020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 275
Target Start/End: Complemental strand, 34899 - 34779
Alignment:
Q  155 catagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||  |||||||| ||||| ||  ||  |||| |||| ||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||    
T  34899 catagaaaattggcaaaactagacgcccgctttccttgaagcagtgaatgatgtggacaagttcgtccaagcaaaatgaagaagaagcataattgataga 34800  T
Q  255 aaacacaggaatgaagatcct 275  Q
     || ||||||||||| |||||    
T  34799 caagacaggaatgaaaatcct 34779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 59756 - 59650
Alignment:
Q  143 taggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggc 242  Q
    |||| ||||| ||| |||||||||||||||| || | |||||| || |||||||| ||||||||||| ||||||  |||||||||| |||||||||| ||    
T  59756 taggttccacaccaaagaaaacaggcaaaacgaggcaacccttggttttgtagcagtgaatgatgtggacaagtgtgtccaaacaagatgaagaagatgc 59657  T
Q  243 atagttg 249  Q
    |||||||    
T  59656 atagttg 59650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 275
Target Start/End: Original strand, 58251 - 58415
Alignment:
Q  111 accataactcccactttgatgtcgtatgtgactaggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtga 210  Q
    ||||||||| |||  ||||||||| | ||||  ||| |||||| |||||||||  |||||||| || || || | |  || | |||| |||||||||||     
T  58251 accataacttccatcttgatgtcgcacgtgagaaggttccacgtcatagaaaattggcaaaactaggcgcccatattcctcgaagcagtgaatgatgtgg 58350  T
Q  211 acaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcct 275  Q
    |||||||||| ||| |||||||||||||| |||||||||||||| || || |||||||| |||||    
T  58351 acaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcct 58415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 3279823 - 3279763
Alignment:
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgataga 254  Q
    |||||||||||||||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  3279823 agcaatgaatgatgtggacaagttcgtccaaacaaaatatagaagaagcatagttgataga 3279763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 247
Target Start/End: Original strand, 17993736 - 17993789
Alignment:
Q  194 agcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggcatagt 247  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  17993736 agcattgaatgatgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 260
Target Start/End: Complemental strand, 16689196 - 16689080
Alignment:
Q  144 aggatccacgccatagaaaacaggcaaaacaagacgaccctttgtcttgtagcaatgaatgatgtgaacaagttcgtccaaacaaaatgaagaagaggca 243  Q
    |||||||||| ||||||||||||||||||| || ||||| ||||   || ||| || ||||||||  |||||||| ||||||||||| || ||| | |||    
T  16689196 aggatccacgtcatagaaaacaggcaaaactagccgaccttttgcactgaagccatcaatgatgttgacaagttcatccaaacaaaacgaggaaaatgca 16689097  T
Q  244 tagttgatagaaaacac 260  Q
    |||||  ||||||||||    
T  16689096 tagttcttagaaaacac 16689080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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