View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1407_low_13 (Length: 293)

Name: NF1407_low_13
Description: NF1407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1407_low_13
NF1407_low_13
[»] chr7 (45 HSPs)
chr7 (15-179)||(25483536-25483700)
chr7 (16-128)||(36121427-36121539)
chr7 (16-128)||(3117291-3117403)
chr7 (16-124)||(37658106-37658214)
chr7 (16-129)||(35670345-35670458)
chr7 (16-124)||(8932491-8932599)
chr7 (16-124)||(9806580-9806688)
chr7 (16-124)||(30582671-30582779)
chr7 (16-120)||(39870012-39870116)
chr7 (16-124)||(40061163-40061271)
chr7 (16-124)||(1601971-1602078)
chr7 (15-126)||(30999331-30999445)
chr7 (16-127)||(33982306-33982417)
chr7 (16-127)||(43544887-43544998)
chr7 (65-128)||(6476922-6476985)
chr7 (16-111)||(31619518-31619613)
chr7 (38-129)||(35747020-35747111)
chr7 (54-124)||(25751111-25751181)
chr7 (69-134)||(28494320-28494385)
chr7 (16-129)||(31436238-31436351)
chr7 (16-128)||(31030755-31030867)
chr7 (16-124)||(31969457-31969565)
chr7 (60-124)||(41406188-41406252)
chr7 (16-124)||(43468001-43468109)
chr7 (16-124)||(44104567-44104675)
chr7 (65-124)||(46534408-46534467)
chr7 (38-124)||(596125-596211)
chr7 (65-135)||(46349924-46349994)
chr7 (39-127)||(585904-585992)
chr7 (39-127)||(1602067-1602154)
chr7 (69-129)||(31031938-31031998)
chr7 (16-124)||(44570932-44571040)
chr7 (69-128)||(4060348-4060407)
chr7 (69-124)||(6243867-6243922)
chr7 (69-128)||(14792161-14792220)
chr7 (69-124)||(21920840-21920895)
chr7 (69-124)||(27826709-27826764)
chr7 (38-121)||(33979619-33979702)
chr7 (69-124)||(42329067-42329122)
chr7 (69-124)||(43156568-43156623)
chr7 (69-127)||(28958166-28958224)
chr7 (89-127)||(42825997-42826035)
chr7 (38-124)||(42833737-42833823)
chr7 (69-123)||(48935236-48935290)
chr7 (59-123)||(1602160-1602224)
[»] chr8 (40 HSPs)
chr8 (29-127)||(38760814-38760912)
chr8 (16-124)||(18146342-18146450)
chr8 (16-124)||(45069810-45069918)
chr8 (29-129)||(42353696-42353794)
chr8 (16-124)||(12208806-12208914)
chr8 (16-124)||(12453234-12453342)
chr8 (38-130)||(43150246-43150338)
chr8 (38-134)||(43873948-43874044)
chr8 (16-124)||(45237784-45237892)
chr8 (16-129)||(45236955-45237068)
chr8 (38-129)||(35253043-35253134)
chr8 (38-127)||(31642762-31642851)
chr8 (16-129)||(40532053-40532165)
chr8 (65-128)||(3512467-3512530)
chr8 (38-124)||(43129590-43129676)
chr8 (71-128)||(35160316-35160373)
chr8 (16-76)||(25133258-25133318)
chr8 (16-120)||(29051164-29051268)
chr8 (65-124)||(5838256-5838315)
chr8 (38-81)||(34617705-34617748)
chr8 (38-125)||(38364484-38364571)
chr8 (38-124)||(35019487-35019573)
chr8 (59-124)||(29725741-29725806)
chr8 (16-81)||(41356333-41356398)
chr8 (65-129)||(2773623-2773687)
chr8 (16-124)||(4477610-4477718)
chr8 (69-129)||(20697550-20697610)
chr8 (69-129)||(35057345-35057405)
chr8 (69-129)||(43800813-43800873)
chr8 (69-128)||(22215107-22215166)
chr8 (69-132)||(39733718-39733781)
chr8 (65-124)||(40529501-40529560)
chr8 (38-124)||(39104191-39104277)
chr8 (64-129)||(53509-53574)
chr8 (71-124)||(284818-284871)
chr8 (71-124)||(631006-631059)
chr8 (71-124)||(816818-816871)
chr8 (65-130)||(16786571-16786636)
chr8 (69-129)||(25099408-25099468)
chr8 (69-128)||(38747001-38747061)
[»] chr3 (39 HSPs)
chr3 (16-128)||(32111551-32111663)
chr3 (38-123)||(46114989-46115074)
chr3 (38-127)||(43860723-43860812)
chr3 (16-124)||(34785869-34785977)
chr3 (16-124)||(40374499-40374607)
chr3 (19-129)||(39534935-39535045)
chr3 (16-130)||(40980131-40980245)
chr3 (16-130)||(46668335-46668449)
chr3 (38-127)||(42167345-42167434)
chr3 (59-127)||(50935710-50935778)
chr3 (38-124)||(5505932-5506018)
chr3 (16-122)||(36660127-36660233)
chr3 (38-127)||(2229183-2229272)
chr3 (16-124)||(6586265-6586373)
chr3 (16-124)||(12122872-12122980)
chr3 (16-120)||(36806926-36807030)
chr3 (16-127)||(39129371-39129482)
chr3 (16-127)||(48071973-48072084)
chr3 (38-124)||(7041730-7041816)
chr3 (67-129)||(12764666-12764728)
chr3 (38-120)||(22978083-22978165)
chr3 (16-124)||(48747404-48747512)
chr3 (16-124)||(32390105-32390215)
chr3 (38-124)||(42877240-42877326)
chr3 (16-124)||(32999648-32999756)
chr3 (69-134)||(34436019-34436084)
chr3 (59-124)||(39129300-39129365)
chr3 (59-124)||(41888809-41888874)
chr3 (69-129)||(19274725-19274785)
chr3 (69-124)||(8321475-8321530)
chr3 (69-124)||(9558904-9558959)
chr3 (69-124)||(41991728-41991783)
chr3 (8-75)||(44896049-44896116)
chr3 (65-124)||(51980732-51980791)
chr3 (38-124)||(41889434-41889520)
chr3 (71-124)||(4070816-4070869)
chr3 (89-130)||(45355124-45355165)
chr3 (69-129)||(12055559-12055619)
chr3 (69-129)||(17666797-17666857)
[»] chr2 (37 HSPs)
chr2 (16-130)||(40862195-40862308)
chr2 (16-127)||(38928481-38928592)
chr2 (16-123)||(18109706-18109813)
chr2 (16-134)||(8341146-8341264)
chr2 (38-124)||(33178961-33179047)
chr2 (40-129)||(1086038-1086127)
chr2 (16-129)||(39532057-39532170)
chr2 (16-124)||(14452300-14452408)
chr2 (16-124)||(26340025-26340133)
chr2 (16-124)||(37240949-37241057)
chr2 (16-124)||(44525978-44526086)
chr2 (38-127)||(6322153-6322242)
chr2 (38-127)||(11447237-11447326)
chr2 (65-121)||(5774096-5774152)
chr2 (38-122)||(15265354-15265438)
chr2 (38-110)||(28125019-28125091)
chr2 (29-132)||(7183286-7183389)
chr2 (69-128)||(42519710-42519769)
chr2 (69-124)||(45376909-45376964)
chr2 (38-124)||(36600937-36601023)
chr2 (16-124)||(10247376-10247482)
chr2 (16-129)||(35422038-35422151)
chr2 (38-123)||(38245913-38245998)
chr2 (69-129)||(12160958-12161018)
chr2 (68-124)||(42097955-42098011)
chr2 (69-125)||(43496161-43496217)
chr2 (69-124)||(11018076-11018131)
chr2 (69-124)||(14958120-14958175)
chr2 (69-124)||(30523609-30523664)
chr2 (69-124)||(39241205-39241260)
chr2 (59-124)||(6319537-6319602)
chr2 (71-124)||(24520264-24520317)
chr2 (16-121)||(32482236-32482341)
chr2 (69-129)||(10361388-10361448)
chr2 (69-129)||(16496660-16496720)
chr2 (69-129)||(34245241-34245301)
chr2 (59-127)||(38928598-38928666)
[»] chr1 (38 HSPs)
chr1 (16-122)||(42628209-42628315)
chr1 (8-124)||(31496610-31496726)
chr1 (16-124)||(31656369-31656477)
chr1 (16-124)||(5698126-5698234)
chr1 (38-129)||(44502556-44502647)
chr1 (38-124)||(3795977-3796063)
chr1 (7-129)||(14390417-14390539)
chr1 (16-122)||(4361051-4361157)
chr1 (38-124)||(27667675-27667761)
chr1 (16-130)||(35179814-35179928)
chr1 (16-129)||(9223835-9223948)
chr1 (59-127)||(4640127-4640195)
chr1 (69-128)||(11823580-11823639)
chr1 (16-124)||(38667187-38667299)
chr1 (16-111)||(39325508-39325603)
chr1 (38-124)||(44109945-44110031)
chr1 (38-120)||(44299957-44300039)
chr1 (16-81)||(18545588-18545653)
chr1 (16-124)||(41865287-41865395)
chr1 (16-124)||(5698508-5698615)
chr1 (18-124)||(30899415-30899521)
chr1 (68-124)||(2459689-2459745)
chr1 (40-124)||(23259085-23259169)
chr1 (69-129)||(27747602-27747662)
chr1 (69-124)||(1190187-1190242)
chr1 (69-124)||(30358074-30358129)
chr1 (69-124)||(39325611-39325666)
chr1 (16-127)||(42159609-42159720)
chr1 (69-124)||(45900169-45900224)
chr1 (69-124)||(50586223-50586278)
chr1 (38-124)||(11756885-11756971)
chr1 (65-127)||(38058746-38058808)
chr1 (62-124)||(40640679-40640741)
chr1 (38-124)||(43847442-43847528)
chr1 (29-122)||(34086201-34086294)
chr1 (69-129)||(11332837-11332897)
chr1 (69-129)||(11490858-11490918)
chr1 (69-129)||(38815593-38815653)
[»] chr6 (23 HSPs)
chr6 (16-129)||(18368725-18368838)
chr6 (16-124)||(1789787-1789895)
chr6 (16-128)||(190919-191031)
chr6 (16-124)||(4976524-4976632)
chr6 (16-124)||(18801700-18801808)
chr6 (38-124)||(15508349-15508435)
chr6 (38-124)||(31603925-31604011)
chr6 (59-127)||(32562445-32562513)
chr6 (42-125)||(13866263-13866346)
chr6 (69-131)||(20992309-20992371)
chr6 (38-124)||(24159238-24159324)
chr6 (59-124)||(5090118-5090183)
chr6 (65-122)||(25023495-25023552)
chr6 (69-129)||(24119283-24119343)
chr6 (69-124)||(13756364-13756419)
chr6 (69-136)||(20645646-20645713)
chr6 (38-124)||(1290382-1290468)
chr6 (69-127)||(21860231-21860289)
chr6 (16-110)||(31259539-31259633)
chr6 (16-129)||(5956417-5956530)
chr6 (38-127)||(34574608-34574697)
chr6 (69-129)||(21778130-21778190)
chr6 (69-129)||(22707286-22707346)
[»] chr4 (45 HSPs)
chr4 (16-124)||(30411243-30411351)
chr4 (38-124)||(48368982-48369068)
chr4 (16-129)||(19912668-19912781)
chr4 (16-129)||(55610658-55610771)
chr4 (38-125)||(51924025-51924112)
chr4 (38-124)||(50792429-50792515)
chr4 (16-124)||(202290-202398)
chr4 (16-124)||(26923530-26923638)
chr4 (16-124)||(30653499-30653606)
chr4 (16-124)||(45549653-45549761)
chr4 (16-129)||(2390261-2390374)
chr4 (59-124)||(19869960-19870025)
chr4 (38-127)||(48953027-48953116)
chr4 (16-124)||(10658874-10658982)
chr4 (16-124)||(10873019-10873127)
chr4 (16-128)||(28459608-28459720)
chr4 (16-122)||(1771831-1771937)
chr4 (38-124)||(43590534-43590620)
chr4 (16-122)||(50790826-50790932)
chr4 (16-81)||(318683-318748)
chr4 (69-129)||(39840239-39840299)
chr4 (16-124)||(7113502-7113614)
chr4 (37-124)||(19870985-19871072)
chr4 (38-81)||(31997875-31997918)
chr4 (38-124)||(27531830-27531916)
chr4 (69-130)||(19801907-19801968)
chr4 (39-124)||(20986274-20986359)
chr4 (16-129)||(25686981-25687094)
chr4 (89-129)||(24152671-24152711)
chr4 (93-129)||(30996710-30996746)
chr4 (69-124)||(6238188-6238243)
chr4 (69-124)||(33984088-33984143)
chr4 (59-122)||(49646027-49646090)
chr4 (69-124)||(53284007-53284062)
chr4 (66-124)||(14269864-14269922)
chr4 (69-123)||(37114478-37114532)
chr4 (43-125)||(45618060-45618142)
chr4 (60-122)||(55660548-55660610)
chr4 (71-124)||(28778556-28778609)
chr4 (71-124)||(49335237-49335290)
chr4 (64-121)||(49648859-49648916)
chr4 (93-129)||(318740-318776)
chr4 (65-129)||(30653331-30653395)
chr4 (38-118)||(38005551-38005631)
chr4 (69-129)||(45561360-45561419)
[»] chr5 (35 HSPs)
chr5 (38-128)||(11575618-11575708)
chr5 (16-124)||(13018994-13019102)
chr5 (19-129)||(1923942-1924052)
chr5 (16-129)||(4559471-4559584)
chr5 (16-81)||(7948429-7948494)
chr5 (65-130)||(35766553-35766618)
chr5 (16-124)||(8520567-8520675)
chr5 (16-128)||(20768859-20768971)
chr5 (16-127)||(20017297-20017408)
chr5 (68-122)||(3703454-3703508)
chr5 (38-127)||(15524359-15524448)
chr5 (69-131)||(34589970-34590032)
chr5 (69-131)||(37530789-37530851)
chr5 (58-127)||(3033390-3033459)
chr5 (59-124)||(8520497-8520562)
chr5 (16-124)||(3078532-3078640)
chr5 (69-124)||(5050146-5050201)
chr5 (69-124)||(6789658-6789713)
chr5 (69-124)||(7615046-7615101)
chr5 (69-124)||(15498645-15498700)
chr5 (69-124)||(24171365-24171420)
chr5 (65-128)||(26286177-26286240)
chr5 (69-124)||(29525365-29525420)
chr5 (69-124)||(41734313-41734368)
chr5 (69-124)||(42422807-42422862)
chr5 (69-124)||(42709311-42709366)
chr5 (69-127)||(76411-76469)
chr5 (69-127)||(25881504-25881562)
chr5 (59-108)||(3033335-3033384)
chr5 (69-122)||(16218352-16218405)
chr5 (71-124)||(17645306-17645359)
chr5 (72-129)||(23590634-23590691)
chr5 (65-129)||(36944280-36944344)
chr5 (89-129)||(36959461-36959501)
chr5 (38-82)||(41356263-41356307)
[»] scaffold0115 (2 HSPs)
scaffold0115 (16-129)||(4144-4257)
scaffold0115 (16-129)||(11884-11997)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-122)||(94395-94501)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-129)||(14235-14295)
[»] scaffold0060 (1 HSPs)
scaffold0060 (69-124)||(57893-57948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (69-128)||(157659-157718)
[»] scaffold0039 (1 HSPs)
scaffold0039 (16-124)||(76244-76352)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 25483700 - 25483536
Alignment:
Q  15 atataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatt 114  Q
    ||||||||||||||||||| |  |||||||||||| ||| |||||||||||| ||| ||||||||||||| |||||||||| | ||||||||||||| ||    
T  25483700 atataagctaatgtgaaaaactttttaccaaacacgtca-atcctatcaaaataagtttataagctaatacaataagctattagctagcttatttgtgtt 25483602  T
Q  115 accaaacacaacctatgtgt-aaggtcaaaacatatttaacgtaaatttaaatatagaacggtatg 179  Q
     ||||||||||||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  25483601 tccaaacacaacctctatgtaaaggtcaaaacatatttaacgtaaatttaaatatacaacggtatg 25483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 36121539 - 36121427
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| || |||||||||||||||  || ||||||||||||||||||||||||||  |||||||||||| ||| ||| ||||| |||    
T  36121539 tataagctattgagaaaatcgttttaccaaacacatcttattctatcaaaacaagcttataagctaatccaataagctataagctatcttctttgtgtta 36121440  T
Q  116 ccaaacacaacct 128  Q
    |||||||||||||    
T  36121439 ccaaacacaacct 36121427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 3117291 - 3117403
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||| ||||||| |||| |  |||| ||||||| || ||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||| | |||    
T  3117291 tataaactaatgtaaaaaactttttatcaaacacgtctcatcctatcaaaacaagcttataagctaatataataaactataagctaacttatttttgtta 3117390  T
Q  116 ccaaacacaacct 128  Q
    |||||||||||||    
T  3117391 ccaaacacaacct 3117403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 37658106 - 37658214
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  37658106 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 37658205  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  37658206 ccaaacaca 37658214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 35670345 - 35670458
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||||   ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  35670345 tataagctagtgagaaaagttttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 35670444  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  35670445 ccaaacacagccta 35670458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 8932491 - 8932599
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||| || || |||||||  ||||||||||||||| ||| |||||||||||||||||||||||| |  || ||| |||||||||  |||||||| |||    
T  8932491 tataagttagtgagaaaagctttttaccaaacacatctcattctatcaaaacaagcttataagctagtccaacaagttataaactaatttatttgtgtta 8932590  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  8932591 ccaaacaca 8932599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 9806580 - 9806688
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||||||| ||| ||| | |||    
T  9806580 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataaactaacttttttatgtta 9806679  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  9806680 ccaaacaca 9806688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30582779 - 30582671
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||  |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  30582779 tataagctagtgagaaaagctttttaccaaacacatatcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 30582680  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  30582679 ccaaacaca 30582671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 39870012 - 39870116
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  |||||||||||||||||||||||||  || || |||||| ||||||| ||||| |||    
T  39870012 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctaatccaacaaactataagctagcttttttgtgtta 39870111  T
Q  116 ccaaa 120  Q
    |||||    
T  39870112 ccaaa 39870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 40061271 - 40061163
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||| ||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  40061271 tataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 40061172  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  40061171 ccaaacaca 40061163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 1601971 - 1602078
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| ||| |||||||||| ||||||||||||| |  || ||||||||| ||||||| ||| | |||    
T  1601971 tataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagcttataagctagtccaacaagctataagctagctt-tttatgtta 1602069  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  1602070 ccaaacaca 1602078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 126
Target Start/End: Original strand, 30999331 - 30999445
Alignment:
Q  15 atataagctaatgtgaaaagcgctttaccaaacacatcacatcct---atcaaaacaagcttataagctaatagaataagctataaactagcttatttgt 111  Q
    |||||||||| || |||||||  |||||||||||||||  ||  |   |||||||||||||||| ||||| |  |||||||||||||||| |||||||||    
T  30999331 atataagctagtgagaaaagctttttaccaaacacatcttattattttatcaaaacaagcttatgagctagtccaataagctataaactaacttatttgt 30999430  T
Q  112 attaccaaacacaac 126  Q
     ||||||||||||||    
T  30999431 gttaccaaacacaac 30999445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 33982306 - 33982417
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || | |    
T  33982306 tataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataagctagtctaacaagctataagctagcttattcgtgtca 33982405  T
Q  116 ccaaacacaacc 127  Q
    ||||||||||||    
T  33982406 ccaaacacaacc 33982417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 43544887 - 43544998
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||||||||  ||  ||||||||||||||||||||||| |  || |||||||||  ||||||||| || |||    
T  43544887 tataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagttagcttattcgtgtta 43544986  T
Q  116 ccaaacacaacc 127  Q
    ||||||||||||    
T  43544987 ccaaacacaacc 43544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 6476985 - 6476922
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||||||    
T  6476985 aacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacacaacct 6476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 31619613 - 31619518
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgt 111  Q
    ||||||||| ||  ||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || ||||||||||||||||| |||||    
T  31619613 tataagctagtgataaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagtccaacaagctataaactagcttttttgt 31619518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 35747111 - 35747020
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| ||||| ||| |||||||||||| ||||||| ||  | ||| ||||||||| ||||||| ||||| |||||||||||| ||||    
T  35747111 tttaccaaatacatctcattctatcaaaacaatcttataaacttgtcgaacaagctataagctagcttttttgtgttaccaaacacagccta 35747020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 25751181 - 25751111
Alignment:
Q  54 catcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||||||| |||| || |  |||||  ||||||||||||||||||| ||||||||||||    
T  25751181 catcctatcaaaacaagcttgtaaggtagtccaataaattataaactagcttatttgtgttaccaaacaca 25751111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 28494320 - 28494385
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgtgt 134  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| |||||||||    
T  28494320 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagcctatgtgt 28494385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 31436238 - 31436351
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| |  ||||||||||||||  |||  |||||||||||| ||||||| || |  || ||||||||| ||||||| ||||| |||    
T  31436238 tataagctagtgagaaaaactttttaccaaacacatttcattttatcaaaacaagtttataagttagtccaacaagctataagctagcttttttgtgtta 31436337  T
Q  116 ccaaacacaaccta 129  Q
    | ||||||||||||    
T  31436338 cgaaacacaaccta 31436351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 31030755 - 31030867
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| |  |||||||||||||||  ||  ||||||||||||||||||||||| |  || || ||||||| |||||| ||| | |||    
T  31030755 tataagctagtgagaaaaactttttaccaaacacatcttattttatcaaaacaagcttataagctagtccaacaaactataaattagcttttttatgtta 31030854  T
Q  116 ccaaacacaacct 128  Q
    ||||||| |||||    
T  31030855 ccaaacataacct 31030867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 31969457 - 31969565
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||  |||  |||||||||||||||||||| || |  || || |||||| ||| ||| ||||| |||    
T  31969457 tataagctagtgagaaaagctttttaccaaacacatttcattttatcaaaacaagcttataagttagtccaacaatctataagctaacttttttgtgtta 31969556  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  31969557 ccaaacaca 31969565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 41406252 - 41406188
Alignment:
Q  60 atcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||| || |  |||||||||||| |||||||||| || ||||||||||||    
T  41406252 atcaaaacaagcttataagatagtccaataagctataagctagcttattcgtgttaccaaacaca 41406188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 43468001 - 43468109
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||| |||||||  ||||||||||||||| |||  ||||||||||| ||||||||| | |  || || |||||| ||||||| |||   |||    
T  43468001 tataagctaatgagaaaagctttttaccaaacacatctcattttatcaaaacaaacttataagccagtccaacaaactataagctagcttttttcggtta 43468100  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  43468101 ccaaacaca 43468109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 44104567 - 44104675
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  ||||||  ||||||||||||||| ||| ||||||| ||||||||||||| |  |  || || |||||| ||||||| ||| | |||    
T  44104567 tataagctaatgaaaaaagctttttaccaaacacatctcattctatcaagacaagcttataagtttgtccaacaaactataagctagcttttttttgtta 44104666  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  44104667 ccaaacaca 44104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 46534467 - 46534408
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  46534467 aacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 46534408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 596125 - 596211
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||| | ||  ||||||||||||||||||||||| |  || ||| ||||  |||||||||| || ||||||||||||    
T  596125 tttaccaaacacattatattatatcaaaacaagcttataagctagtccaacaagttatatcctagcttattcgtgttaccaaacaca 596211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 135
Target Start/End: Original strand, 46349924 - 46349994
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgtgta 135  Q
    |||||||||||||| ||||  || ||||||||| ||||||| ||||| |||||||||||| ||||| ||||    
T  46349924 aacaagcttataagttaatccaagaagctataagctagcttttttgtgttaccaaacacagcctatatgta 46349994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 585904 - 585992
Alignment:
Q  39 ttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||||||  ||  |||||||| |||||||||||||| |  || |||||||||  ||||||||| || |||| ||||||||||    
T  585904 ttaccaaacacatcttattttatcaaaataagcttataagctagtccaacaagctataagttagcttattcgtgttactaaacacaacc 585992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 1602067 - 1602154
Alignment:
Q  39 ttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||| ||| |||||||||| ||||||||||||| |  || |||||||||  |||||| ||| | ||| |||||||||||    
T  1602067 ttaccaaacacatctcattctatcaaaactagcttataagctagtccaacaagctataagttagctt-tttatgttatcaaacacaacc 1602154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 31031938 - 31031998
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||| ||||  || ||||||||||||||||| ||||| |||||||||||| ||||    
T  31031938 agcttataagttaatccaacaagctataaactagcttttttgtgttaccaaacacagccta 31031998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 44571040 - 44570932
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||  ||||||   |||||||||||| |  ||| |||  ||||| ||||||||||||| |  |||||||||||| ||| ||| ||||| |||    
T  44571040 tataagctaataagaaaagttttttaccaaacacgtttcattctacaaaaactagcttataagctagtccaataagctataagctaacttttttgtgtta 44570941  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  44570940 ccaaacaca 44570932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 4060407 - 4060348
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || || |||||| ||||||| ||||| ||||||||||||||||    
T  4060407 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacacaacct 4060348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 6243922 - 6243867
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || |||||||||||||||||  |||| ||||||||||||    
T  6243922 agcttataagctaatccaacaagctataaactagctttgttgtgttaccaaacaca 6243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 14792161 - 14792220
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || ||||||||| ||| ||||||||| |||||||| |||||||    
T  14792161 agcttataagctaatctaacaagctataagctaacttatttgtgttaccaaatacaacct 14792220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 21920840 - 21920895
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||| |  || ||||||||| ||||||||||||| ||||||||||||    
T  21920840 agcttataagctagtccaacaagctataagctagcttatttgtgttaccaaacaca 21920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 27826764 - 27826709
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  27826764 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 27826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 33979702 - 33979619
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaac 121  Q
    |||||||||||||||  ||  |||||||||| ||||||||| || |  || ||||||||| |||||||||| || |||||||||    
T  33979702 tttaccaaacacatcttattatatcaaaacatgcttataaggtagtccaacaagctataagctagcttattcgtgttaccaaac 33979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 42329067 - 42329122
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  42329067 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 42329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 43156623 - 43156568
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  43156623 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 43156568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 28958166 - 28958224
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||| ||||  || ||||||||| ||||||| ||||| |||||||||||||||    
T  28958166 agcttataagttaatccaacaagctataagctagcttttttgtgttaccaaacacaacc 28958224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 42826035 - 42825997
Alignment:
Q  89 aagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  42826035 aagctataaactaacttatttgtgttaccaaacacaacc 42825997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 42833737 - 42833823
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||| ||||||||||  ||  ||||||||||||||||| ||||| |  || |||||||||   |||||||| |||||||||||||||    
T  42833737 tttatcaaacacatcttattatatcaaaacaagcttatcagctagtccaacaagctataagtcagcttattcgtattaccaaacaca 42833823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 48935290 - 48935236
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacac 123  Q
    ||||||||| |||||  || ||||||||| ||||||||||||| |||||||||||    
T  48935290 agcttataaactaatccaacaagctataagctagcttatttgtgttaccaaacac 48935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 1602160 - 1602224
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacac 123  Q
    ||||||||||||||||||||||| |  || ||||||||| ||| |||||| || ||| |||||||    
T  1602160 tatcaaaacaagcttataagctagtccaacaagctataagctatcttattcgtgttatcaaacac 1602224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 38760814 - 38760912
Alignment:
Q  29 gaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||  ||||||||||||||| ||| |||||||||||||||||||||||| |  || |||||||||||||| ||||||||||||||||||||||||    
T  38760814 gaaaagctttttaccaaacacatctcattctatcaaaacaagcttataagctagtccaacaagctataaactagtttatttgtattaccaaacacaacc 38760912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18146450 - 18146342
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  18146450 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 18146351  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  18146350 ccaaacaca 18146342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 45069810 - 45069918
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  45069810 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 45069909  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  45069910 ccaaacaca 45069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 42353696 - 42353794
Alignment:
Q  29 gaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||  ||||||||||||||||  | |||||||||||| |||||||||||||  || || |||||||||| ||| ||||||||||||||||||||||    
T  42353696 gaaaagctttttaccaaacacatca--ttctatcaaaacaaacttataagctaatccaacaaactataaactaacttttttgtattaccaaacacaacct 42353793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 12208914 - 12208806
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  12208914 tataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 12208815  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  12208814 ccaaacaca 12208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 12453342 - 12453234
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  12453342 tataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 12453243  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  12453242 ccaaacaca 12453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 43150338 - 43150246
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctat 130  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||||||||||| |||||    
T  43150338 tttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacagcctat 43150246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 43874044 - 43873948
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgtgt 134  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||||||||||| |||||  ||||||||||| |||| ||||    
T  43874044 tttaccaaacacatctcattttatcaaaacaagcttataagctagttcaacaagctataaactagcttttttgtggtaccaaacacagcctaagtgt 43873948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 45237784 - 45237892
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  ||||||  ||||||||||||||| ||| ||||||| |||||||||||||||  |  || ||||||||| ||||||| ||||| |||    
T  45237784 tataagctaatgaaaaaagctttttaccaaacacatctcattctatcaagacaagcttataagcttgttcaacaagctataagctagcttttttgtgtta 45237883  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  45237884 ccaaacaca 45237892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 45236955 - 45237068
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||| |||||||  |||||||||||  || ||| |||||||||||| | ||||||||| || || ||| ||||| ||||||| ||||| |||    
T  45236955 tataagctaatgagaaaagctttttaccaaacatgtctcattctatcaaaacaaacctataagctagtacaaaaagttataagctagcttttttgtgtta 45237054  T
Q  116 ccaaacacaaccta 129  Q
     |||||||||||||    
T  45237055 tcaaacacaaccta 45237068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 35253043 - 35253134
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||||| ||| |||||||||||||||||||||||  |  |  || |||||| ||||||| ||||| |||||||||||||||||    
T  35253043 tttaccaaacacatcgcattctatcaaaacaagcttataagcttgtccagcaaactataagctagcttgtttgtgttaccaaacacaaccta 35253134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 31642762 - 31642851
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  ||||||||||||||||||| ||| |  || ||||||||| |||||||||| || |||||||||||||||    
T  31642762 tttaccaaacacatcttattgtatcaaaacaagcttataatctagtccaacaagctataagctagcttattcgtgttaccaaacacaacc 31642851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 40532165 - 40532053
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||| |||||||| |||  |||||||||||||||||||| || |  ||||| |||||| ||||||| ||||| |||    
T  40532165 tataagctagtgagaaaagctttttaccgaacacatctcattttatcaaaacaagcttataagttagtccaataaactataagctagctt-tttgtgtta 40532067  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  40532066 ccaaacacagccta 40532053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 3512530 - 3512467
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||||||    
T  3512530 aacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacacaacct 3512467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 43129676 - 43129590
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||| ||||||||  ||  |||||||||||| |||||||||| |  || |||||||||||||||||||| || ||||||||||||    
T  43129676 tttaccgaacacatcttattatatcaaaacaaggttataagctagtccaacaagctataaactagcttattcgtgttaccaaacaca 43129590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 35160316 - 35160373
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||  |||||||||||| ||||||| ||||| ||||||||||||||||    
T  35160316 cttataagctaatccaataagctataagctagcttttttgtgttaccaaacacaacct 35160373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 25133318 - 25133258
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttata 76  Q
    ||||||||| || ||||| |  ||||||||||||||||||| |||||||||||||||||||    
T  25133318 tataagctagtgagaaaaactttttaccaaacacatcacattctatcaaaacaagcttata 25133258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 29051164 - 29051268
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||| || || |||||||  ||||||||||||||||||| |||||||||||||||||| || || |  || || |||||| |||| |||| ||| |||    
T  29051164 tataagttagtgagaaaagctttttaccaaacacatcacattctatcaaaacaagcttatgagttagtccaacaaactataagctagtttatctgtgtta 29051263  T
Q  116 ccaaa 120  Q
    |||||    
T  29051264 ccaaa 29051268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 5838315 - 5838256
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||||||  || |||||||||  |||||| ||||||||||||||||||    
T  5838315 aacaagcttataagctaatccaacaagctataagttagcttttttgtattaccaaacaca 5838256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 34617748 - 34617705
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  34617748 tttaccaaacacatctcattctatcaaaacaagcttataagcta 34617705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 38364484 - 38364571
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaa 125  Q
    |||||||||||||||  ||  ||||||||||||||||||| ||| |  || ||||||||| |||| ||||| || |||||||||||||    
T  38364484 tttaccaaacacatcttattatatcaaaacaagcttataaactagtccaacaagctataagctagtttattcgtgttaccaaacacaa 38364571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 35019573 - 35019487
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| ||| ||||||||| ||| | ||||||    
T  35019573 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctatcttatttgtgttatctaacaca 35019487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 29725806 - 29725741
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  || ||||||||| |||||||||  ||||||| |||||||    
T  29725806 tatcaaaacaagcttataagctagtccaacaagctataagctagcttatccgtattacgaaacaca 29725741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 41356398 - 41356333
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    ||||||| |||| |||||||   |||||||||||||| |||  |||||||||||||||||||||||    
T  41356398 tataagccaatgagaaaagcttgttaccaaacacatctcattttatcaaaacaagcttataagcta 41356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 2773623 - 2773687
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||||||| |  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  2773623 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacagccta 2773687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 4477610 - 4477718
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||| |||||||||  |||  ||||||||||| ||||||| ||| |  || ||||||||| ||| ||| ||||| |||    
T  4477610 tataagctagtgagaaaagctttttatcaaacacatttcattttatcaaaacaaacttataatctagtccaacaagctataagctaacttttttgtgtta 4477709  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  4477710 ccaaacaca 4477718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 20697550 - 20697610
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||| ||| |||||||||||||||||| ||||    
T  20697550 agcttataagctaatccaacaagctataagctaacttttttgtattaccaaacacagccta 20697610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 35057345 - 35057405
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||| ||||||| | |||||||||||||||||    
T  35057345 agcttataagctaatctaacaagctataagctatcttatttatgttaccaaacacaaccta 35057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 43800813 - 43800873
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  43800813 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 43800873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 22215166 - 22215107
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || ||||||||| ||| ||| ||||| ||||||||||||||||    
T  22215166 agcttataagctaatccaacaagctataagctaacttttttgtgttaccaaacacaacct 22215107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 39733781 - 39733718
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgt 132  Q
    |||||||||||||||  || ||| ||||| ||||||| ||||| |||||||||||| |||||||    
T  39733781 agcttataagctaatccaacaaggtataagctagcttttttgtgttaccaaacacagcctatgt 39733718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 40529560 - 40529501
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||   || ||||||||| ||||||| ||||| ||||||||||||    
T  40529560 aacaagcttataagctaaacaaacaagctataagctagcttttttgtgttaccaaacaca 40529501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 39104191 - 39104277
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||| |||  ||| ||||||||||||||||||| |  || ||  ||||| |||||||  |||| ||||||||||||    
T  39104191 tttaccaaacacatctcattttataaaaacaagcttataagctagtccaacaaattataagctagctttcttgtgttaccaaacaca 39104277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 53509 - 53574
Alignment:
Q  64 aaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||| |||||||| ||||  || ||||||||| ||||||||||||| |||| ||||||| ||||    
T  53509 aaacaaacttataagttaattcaaaaagctataagctagcttatttgtgttacaaaacacagccta 53574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 284871 - 284818
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||||||| ||| ||||| ||||||||||||    
T  284871 cttataagctaatccaacaagctataaactaacttttttgtgttaccaaacaca 284818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 631006 - 631059
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||||||| ||| ||||| ||||||||||||    
T  631006 cttataagctaatccaacaagctataaactaacttttttgtgttaccaaacaca 631059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 816818 - 816871
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||||||| ||| ||||| ||||||||||||    
T  816818 cttataagctaatccaacaagctataaactaacttttttgtgttaccaaacaca 816871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 16786571 - 16786636
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctat 130  Q
    |||||||||||||||||||  || |||||||||  |||||| ||||| || ||||||||| |||||    
T  16786571 aacaagcttataagctaatccaagaagctataagttagcttttttgtgttgccaaacacagcctat 16786636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 25099468 - 25099408
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||| ||||| ||||||| ||||| |||||||||||| ||||    
T  25099468 agcttataagctaatccaacaagttataagctagcttttttgtgttaccaaacacagccta 25099408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 38747001 - 38747061
Alignment:
Q  69 agcttataagctaatagaataagctataaactagc-ttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || ||||||||| ||||| || ||||| ||||||||||||||||    
T  38747001 agcttataagctaatccaacaagctataagctagctttttttgtgttaccaaacacaacct 38747061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 32111551 - 32111663
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  32111551 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 32111650  T
Q  116 ccaaacacaacct 128  Q
    |||||||||||||    
T  32111651 ccaaacacaacct 32111663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 46115074 - 46114989
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacac 123  Q
    |||||||||||||| | || ||||||||||||||||||||||||||  || ||||||||| ||||||||||||| |||||||||||    
T  46115074 tttaccaaacacattatattctatcaaaacaagcttataagctaatccaacaagctataagctagcttatttgtgttaccaaacac 46114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 43860812 - 43860723
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| ||||||||||||||||||    
T  43860812 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtattaccaaacacaacc 43860723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 34785869 - 34785977
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||| || || |||||||  |||||||||||| ||  || |||||||||||||||||||||||| |  |||||||||||| ||||||||| ||| |||    
T  34785869 tataagttagtgagaaaagctatttaccaaacacgtcttattctatcaaaacaagcttataagctagtccaataagctataagctagcttatgtgtgtta 34785968  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  34785969 ccaaacaca 34785977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 40374499 - 40374607
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || |||||||||  |||||| ||||| |||    
T  40374499 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagttagcttttttgtgtta 40374598  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  40374599 ccaaacaca 40374607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 39534935 - 39535045
Alignment:
Q  19 aagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattacca 118  Q
    |||||||||  ||||||  ||||||||||||||| ||| ||||||||| |||||||||||||  |  ||||||||| || ||||||||||| | ||||||    
T  39534935 aagctaatgaaaaaagctttttaccaaacacatctcattctatcaaaaaaagcttataagcttgtccaataagctacaagctagcttatttctgttacca 39535034  T
Q  119 aacacaaccta 129  Q
    |||||| ||||    
T  39535035 aacacagccta 39535045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 40980131 - 40980245
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  |||||||||||| |||||||||| |  || || |||||| |||| || ||||| |||    
T  40980131 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagtttataagctagttcaacaaactataagctagtttttttgtgtta 40980230  T
Q  116 ccaaacacaacctat 130  Q
    |||||||||||||||    
T  40980231 ccaaacacaacctat 40980245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 46668449 - 46668335
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||||||||||  |||||||||||||||  ||  |||||||||||||||||||| || |  || ||||||||| ||||||| ||| | |||    
T  46668449 tataagctagtgtgaaaagctttttaccaaacacatcttattttatcaaaacaagcttataagttagtccaacaagctataagctagcttttttatgtta 46668350  T
Q  116 ccaaacacaacctat 130  Q
    ||||||||| |||||    
T  46668349 ccaaacacagcctat 46668335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 42167345 - 42167434
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || |||||||||||||||    
T  42167345 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaacc 42167434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 50935778 - 50935710
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||||||||||||||| |  |||||||||||| |||||||||| || |||||||||||||||    
T  50935778 tatcaaaacaagcttataagctagtccaataagctataagctagcttattcgtgttaccaaacacaacc 50935710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 5506018 - 5505932
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |  || ||| ||||| ||||||| ||||| ||||||||||||    
T  5506018 tttaccaaacacatctcattctatcaaaacaaacttataagctagtccaacaagttataagctagcttttttgtgttaccaaacaca 5505932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 36660127 - 36660233
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||  || |||  |||||||||||||||||||||||||  || || |||||| ||||||| ||||| |||    
T  36660127 tataagctagtgagaaaagctttttaccaaacaagtctcattttatcaaaacaagcttataagctaatccaacaaactataagctagcttttttgtgtta 36660226  T
Q  116 ccaaaca 122  Q
    |||||||    
T  36660227 ccaaaca 36660233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 2229183 - 2229272
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||||| |  ||| |||||||||||| ||||||| || |  ||||||||||||||||| ||||| || |||||||||||||||    
T  2229183 tttaccaaacacaccttatcatatcaaaacaaggttataagatagtccaataagctataaactagattattcgtgttaccaaacacaacc 2229272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 6586373 - 6586265
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||  |||  ||||||||||||||||||||||| |  || || |||||||||| ||| ||| | |||    
T  6586373 tataagctagtgagaaaagctttttaccaaacacatatcattttatcaaaacaagcttataagctagtccaacaaactataaactaacttttttatgtta 6586274  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  6586273 ccaaacaca 6586265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12122872 - 12122980
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  |||||   |||||||||||| || ||| |||  ||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  12122872 tataagctaatgaaaaaagttttttaccaaacacgtctcattctacaaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 12122971  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  12122972 ccaaacaca 12122980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 120
Target Start/End: Complemental strand, 36807030 - 36806926
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||| | || |||||||  |||| |||||||||| |||  ||||||||||||||||||||||| |  || |||||| |||||||||| ||||| |||    
T  36807030 tataagccagtgagaaaagctttttatcaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctaaaaactagcttttttgtgtta 36806931  T
Q  116 ccaaa 120  Q
    |||||    
T  36806930 ccaaa 36806926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 39129482 - 39129371
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||| ||  ||||||||||| ||| ||| |||||||||| |||||||||| || |  || ||||||||| ||||||| ||| | |||    
T  39129482 tataagctagtgagaaacgctttttaccaaacatatctcattctatcaaaactagcttataagatagtccaacaagctataagctagcttttttatgtta 39129383  T
Q  116 ccaaacacaacc 127  Q
    ||||||||||||    
T  39129382 ccaaacacaacc 39129371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 48072084 - 48071973
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||| ||||| || |||    
T  48072084 tataagctagtggaaaaagctttttaccaaacacatcttattgtatcaaaacaagcttataagctagtccaacaagctataagctagtttattcgtgtta 48071985  T
Q  116 ccaaacacaacc 127  Q
     |||||||||||    
T  48071984 acaaacacaacc 48071973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 7041816 - 7041730
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| ||||||||||  | ||||||||||||    
T  7041816 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcttgttaccaaacaca 7041730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 12764728 - 12764666
Alignment:
Q  67 caagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||||  || ||||||||||||||||| ||||| |||||||||||| ||||    
T  12764728 caagcttataagctaatccaaaaagctataaactagcttttttgtgttaccaaacacagccta 12764666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 22978165 - 22978083
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaa 120  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || ||||||||    
T  22978165 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaa 22978083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 48747512 - 48747404
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  |||||   |||||||||||| || ||| |||  ||||||||||||||||||| |  ||||| |||||| ||| ||| ||||| |||    
T  48747512 tataagctaatgaaaaaagttttttaccaaacacgtctcattctacaaaaacaagcttataagctagtccaataaactataagctaacttttttgtgtta 48747413  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  48747412 ccaaacaca 48747404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 32390105 - 32390215
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgta--t 113  Q
    ||||||||| || ||||| |  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||| ||| ||| ||  |    
T  32390105 tataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctaacttttttttatgt 32390204  T
Q  114 taccaaacaca 124  Q
    |||||||||||    
T  32390205 taccaaacaca 32390215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 42877326 - 42877240
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||| ||||||||  ||  |||||||||| |||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  42877326 tttacctaacacatcttattatatcaaaacatgcttataagctagtccaagaagctataagctagcttattcgtgttaccaaacaca 42877240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 32999648 - 32999756
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcct-atcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatt 114  Q
    |||||||| ||| ||||||| | |||||||||||||||| |  | ||| || |||||||||||||||||  || ||||||||| ||||||| ||||| ||    
T  32999648 tataagctcatgagaaaagctcgttaccaaacacatcacgttttcatccaa-caagcttataagctaatccaagaagctataagctagcttttttgtgtt 32999746  T
Q  115 accaaacaca 124  Q
    | ||||||||    
T  32999747 atcaaacaca 32999756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 34436019 - 34436084
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgtgt 134  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| |||| ||||    
T  34436019 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacaccctaagtgt 34436084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 39129365 - 39129300
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  || |||||||| ||||||||||| || |||||| |||||    
T  39129365 tatcaaaacaagcttataagctagtccaacaagctatagactagcttattcgtgttaccacacaca 39129300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 41888874 - 41888809
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  || || |||||| |||||||||| || ||||||||||||    
T  41888874 tatcaaaacaagcttataagctagtccaacaaactataagctagcttattcgtgttaccaaacaca 41888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 19274785 - 19274725
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  19274785 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 19274725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 8321475 - 8321530
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  8321475 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 8321530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 9558904 - 9558959
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||||||| | ||||||||||||    
T  9558904 agcttataagctaatctaacaagctataagctagcttatttatgttaccaaacaca 9558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 41991728 - 41991783
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  41991728 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 41991783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 44896049 - 44896116
Alignment:
Q  8 aaaaaccatataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttat 75  Q
    ||||||| ||||||||| ||  |||||   ||||||||||||||| ||| ||||||||||||||||||    
T  44896049 aaaaaccctataagctagtgaaaaaagttttttaccaaacacatctcattctatcaaaacaagcttat 44896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 51980791 - 51980732
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||| |  || ||||||||||||| ||| ||||| ||||||||||||    
T  51980791 aacaagcttataagctagtccaacaagctataaactaacttttttgtgttaccaaacaca 51980732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 41889434 - 41889520
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||| |||||  ||  ||||||||||||||||||| ||| |  || ||||||||| |||| ||||| || ||||||||||||    
T  41889434 tttaccaaatacatcttattatatcaaaacaagcttataaactagtccaacaagctataagctagtttattcgtgttaccaaacaca 41889520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 4070869 - 4070816
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||| |  || || |||||||||||||||||||| ||||||||||||    
T  4070869 cttataagctagttcaacaaactataaactagcttatttgtgttaccaaacaca 4070816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 45355165 - 45355124
Alignment:
Q  89 aagctataaactagcttatttgtattaccaaacacaacctat 130  Q
    ||||||||||||||||| ||||| |||||||||||| |||||    
T  45355165 aagctataaactagcttttttgtgttaccaaacacagcctat 45355124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 12055559 - 12055619
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || || |||||| ||||||| ||||| |||||||||||| ||||    
T  12055559 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacacagccta 12055619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 17666857 - 17666797
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||| ||||  |||||||||||| ||||||| ||||  |||||||||||| ||||    
T  17666857 agcttataagttaatccaataagctataagctagcttttttgggttaccaaacacagccta 17666797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 40862195 - 40862308
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||||||||||| ||||| |||    
T  40862195 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataaactagctt-tttgtgtta 40862293  T
Q  116 ccaaacacaacctat 130  Q
    ||||||||| |||||    
T  40862294 ccaaacacagcctat 40862308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 38928481 - 38928592
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||| |||| ||  ||||||||||||||| ||| |||||||||| ||||||||||||| |  || ||||||||| ||||||| ||| | |||    
T  38928481 tataagctaatgagaaacgctttttaccaaacacatctcattctatcaaaactagcttataagctagtccaacaagctataagctagcttttttatgtta 38928580  T
Q  116 ccaaacacaacc 127  Q
    ||||||||||||    
T  38928581 ccaaacacaacc 38928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 18109706 - 18109813
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||| | || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  18109706 tataagcgagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 18109805  T
Q  116 ccaaacac 123  Q
    ||||||||    
T  18109806 ccaaacac 18109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 8341146 - 8341264
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||| ||||||||||| ||| ||||||||  |||||||||||||| |  || ||| ||||| ||||||||||||| |||    
T  8341146 tataagctagtgagaaaagctttttgccaaacacatctcattctatcaaagtaagcttataagctagtccaacaagttataagctagcttatttgtgtta 8341245  T
Q  116 ccaaacacaacctatgtgt 134  Q
    ||||||||| |||| ||||    
T  8341246 ccaaacacagcctacgtgt 8341264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 33179047 - 33178961
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  33179047 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 33178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 1086127 - 1086038
Alignment:
Q  40 taccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||  ||  |||||||||||||||||||| || |  || ||||||||| ||||||||||||| |||||||||||| ||||    
T  1086127 taccaaacacatcttattttatcaaaacaagcttataagttagtttaacaagctataagctagcttatttgtgttaccaaacacagccta 1086038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 39532170 - 39532057
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||| ||||||||||| |  || ||||||||| |||  || ||||| |||    
T  39532170 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaaacttataagctagtccaacaagctataagctaatttttttgtgtta 39532071  T
Q  116 ccaaacacaaccta 129  Q
    |||||||| |||||    
T  39532070 ccaaacacgaccta 39532057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 14452408 - 14452300
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||| ||| || |||    
T  14452408 tataagctagtgacaaaagctttttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagctaattcgtgtta 14452309  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  14452308 ccaaacaca 14452300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 26340025 - 26340133
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||| ||| |||  ||||||||||||||||||||||| |  || ||| |||||  |||||| ||||| |||    
T  26340025 tataagctagtgagaaaagctttttaccaaacatatctcattttatcaaaacaagcttataagctagtccaacaagttataagttagcttttttgtgtta 26340124  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  26340125 ccaaacaca 26340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 37241057 - 37240949
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||| ||||||||||  || |||||||||||| ||||||||||| |  || ||| ||||| |||||||||||||||||    
T  37241057 tataagctagtggaaaaagctttttagcaaacacatcttattctatcaaaacaaacttataagctagtctaacaagttataagctagcttatttgtatta 37240958  T
Q  116 ccaaacaca 124  Q
    || ||||||    
T  37240957 ccgaacaca 37240949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 44525978 - 44526086
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  ||||||  ||||||||||||||  ||| ||||||||||||| |||||||||  |  || |||||| || ||||||||||| | |||    
T  44525978 tataagctaatgaaaaaagctttttaccaaacacatttcattctatcaaaacaagtttataagcttgtccaacaagctaaaagctagcttatttatgtta 44526077  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  44526078 ccaaacaca 44526086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 6322153 - 6322242
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  |||||||||||| || ||||||| |  || ||||||||| |||||||||| || |||||||||||||||    
T  6322153 tttaccaaacacatcttattatatcaaaacaagtttctaagctagtccaacaagctataagctagcttattcgtgttaccaaacacaacc 6322242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 11447326 - 11447237
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||| |||||||||  || ||||||||||||| |||||||||| |  |  ||||||||| ||||||||||||| |||| ||||||||||    
T  11447326 tttactaaacacatcgtattctatcaaaacaaggttataagctagtccagcaagctataagctagcttatttgtgttactaaacacaacc 11447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 5774152 - 5774096
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaac 121  Q
    |||||||||||||||||||  || ||||||||||||||||| ||||||||| |||||    
T  5774152 aacaagcttataagctaatccaacaagctataaactagcttttttgtattatcaaac 5774096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 15265354 - 15265438
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    |||||||||||| || ||| |||| |||||||||||||||||||    || ||||||||| ||| ||||||||| ||||||||||    
T  15265354 tttaccaaacacgtctcattctattaaaacaagcttataagctagcccaagaagctataagctaacttatttgtgttaccaaaca 15265438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 28125019 - 28125091
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttg 110  Q
    |||||||||||||| |||| |||| ||||||| ||||||||||| |  || ||||||||| ||||||||||||    
T  28125019 tttaccaaacacatgacattctattaaaacaaacttataagctagtccaacaagctataagctagcttatttg 28125091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 7183286 - 7183389
Alignment:
Q  29 gaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||  ||||||||||||||   ||  ||||||||||||||||||| ||| |  || || |||||| ||||||| ||||| |||||||||||| |||    
T  7183286 gaaaagctttttaccaaacacattttattttatcaaaacaagcttataaactagtccaacaaactataagctagcttttttgtgttaccaaacacagcct 7183385  T
Q  129 atgt 132  Q
    ||||    
T  7183386 atgt 7183389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 42519769 - 42519710
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||||||    
T  42519769 agcttataagctaatgcaacaagctataagctagcttttttgtgttaccaaacacaacct 42519710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 45376964 - 45376909
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||| |  || ||||||||||||||||||||||| ||||||||||||    
T  45376964 agcttataagctagtccaacaagctataaactagcttatttgtgttaccaaacaca 45376909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 36601023 - 36600937
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||   ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || ||| ||||||||    
T  36601023 tttaccaaacacattttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttatcaaacaca 36600937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 10247376 - 10247482
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||  | |||||||  ||||||||||||||||  |  ||||||||||||||||||||||| |  || || |||||| ||| ||| ||||| |||    
T  10247376 tataagctagcgagaaaagctttttaccaaacacatcattt--tatcaaaacaagcttataagctagtccaacaaactataagctaacttttttgtgtta 10247473  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  10247474 ccaaacaca 10247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 35422151 - 35422038
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaa--aacaagcttataagctaatagaataagctataaactagcttatttgtat 113  Q
    |||||||| ||| |||||||   |||||||||||||||| |  | ||||  |||||| ||||||||||||  || || |||||||||||||| ||||| |    
T  35422151 tataagctcatgagaaaagcttgttaccaaacacatcacgt--tttcaaccaacaagtttataagctaatccaaaaaactataaactagcttttttgtgt 35422054  T
Q  114 taccaaacacaaccta 129  Q
    ||| ||||||||||||    
T  35422053 tactaaacacaaccta 35422038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 38245913 - 38245998
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacac 123  Q
    |||||||||||| || ||| || |||||||||||||||||| || |  ||||| |||||| ||||||| ||| | |||||||||||    
T  38245913 tttaccaaacacgtcgcattctttcaaaacaagcttataagttagtccaataaactataagctagcttttttatgttaccaaacac 38245998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 12160958 - 12161018
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  12160958 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 12161018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 42097955 - 42098011
Alignment:
Q  68 aagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  42097955 aagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacaca 42098011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 43496217 - 43496161
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaa 125  Q
    |||||||||||||||  || ||||||||| ||||||||||| | |||||||||||||    
T  43496217 agcttataagctaatgcaacaagctataagctagcttatttatgttaccaaacacaa 43496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 11018076 - 11018131
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  11018076 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 11018131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 14958175 - 14958120
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||| |||||  || |||||||||| |||||| ||||||||||||||||||    
T  14958175 agcttataaactaatccaacaagctataaattagcttctttgtattaccaaacaca 14958120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 30523664 - 30523609
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  30523664 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 30523609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 39241205 - 39241260
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  39241205 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 39241260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 6319602 - 6319537
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  || ||||| ||| ||||||||||  | ||||||||||||    
T  6319602 tatcaaaacaagcttataagctagtccaacaagctgtaagctagcttattcttgttaccaaacaca 6319537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 24520264 - 24520317
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||| |||||||||| || ||||||||||||    
T  24520264 cttataagctaatccaacaagctataagctagcttattcgtgttaccaaacaca 24520317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 32482236 - 32482341
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||| ||| || |||||||  |||||||||||| || |||  ||| |||| |||||||||||||| |  |  || |||||||||||||| ||||| |||    
T  32482236 tataaactagtgagaaaagctttttaccaaacacgtctcattttataaaaataagcttataagctagtccagcaaactataaactagcttttttgtgtta 32482335  T
Q  116 ccaaac 121  Q
    ||||||    
T  32482336 ccaaac 32482341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 10361448 - 10361388
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||| |  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  10361448 agcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacagccta 10361388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 16496660 - 16496720
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| |||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  16496660 agcttataaactaatccaacaagctataagctagcttttttgtgttaccaaacacatccta 16496720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 34245301 - 34245241
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||| | |||||||||||| ||||    
T  34245301 agcttataagctaatccaacaagctataagctagcttttttatgttaccaaacacagccta 34245241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 38928598 - 38928666
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||| |||||||||||||||||| |  || || |||||| ||||||||||  | |||||||||||||||    
T  38928598 tatctaaacaagcttataagctagtccaacaaactataagctagcttattcatgttaccaaacacaacc 38928666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 42628209 - 42628315
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||| ||||||||||||||| |  || ||||||||||||||||| |||||||||    
T  42628209 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaagcaagcttataagctagtccaacaagctataaactagcttttttgtatta 42628308  T
Q  116 ccaaaca 122  Q
    |||||||    
T  42628309 ccaaaca 42628315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 31496726 - 31496610
Alignment:
Q  8 aaaaaccatataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttat 107  Q
    |||||| ||||||||||||| ||||| |  ||||||||||||||| ||| |||| |||||||| |||||||||| |  || ||||||||| |||||||||    
T  31496726 aaaaacgatataagctaatgagaaaaactttttaccaaacacatctcattctattaaaacaagtttataagctagtccaagaagctataagctagcttat 31496627  T
Q  108 ttgtattaccaaacaca 124  Q
     ||| ||||||||||||    
T  31496626 ctgtgttaccaaacaca 31496610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 31656477 - 31656369
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||| ||||||| |  || ||||||||||||||||| ||||| |||    
T  31656477 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttgtaagctagtccaacaagctataaactagcttttttgtgtta 31656378  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  31656377 ccaaacaca 31656369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 5698234 - 5698126
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||| |||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  5698234 tataagctagtgagaaaagctttttatcaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 5698135  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  5698134 ccaaacaca 5698126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 44502647 - 44502556
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || |||||||||||||||||||||  |||  |||||||||||| ||||||| ||| | |||||||||||||||||    
T  44502647 tttaccaaacacatcttattctatcaaaacaagcttataagtcaatccaataagctataagctagcttttttatgttaccaaacacaaccta 44502556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 3795977 - 3796063
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| ||||||||||||    
T  3795977 tttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 3796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 129
Target Start/End: Complemental strand, 14390539 - 14390417
Alignment:
Q  7 taaaaaccatataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagctta 106  Q
    |||||||  ||||||||| || ||||| |  ||||||||||||||  |||  ||||||||||||||||||||||| |  || ||||||||| |||||||     
T  14390539 taaaaacgctataagctagtgagaaaaactttttaccaaacacatttcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttt 14390440  T
Q  107 tttgtattaccaaacacaaccta 129  Q
    ||||| |||||||||||| ||||    
T  14390439 tttgtgttaccaaacacagccta 14390417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 4361051 - 4361157
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||  ||||||   ||||||||||||||| ||| |||| ||||||||||||||||||| |  ||||| |||||| ||| ||| ||||| |||    
T  4361051 tataagctaataagaaaagttttttaccaaacacatctcattctattaaaacaagcttataagctagtccaataaactataagctaacttttttgtgtta 4361150  T
Q  116 ccaaaca 122  Q
    |||||||    
T  4361151 ccaaaca 4361157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 27667761 - 27667675
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||| |||  ||||||||||| ||||||||||| |  |||||||||||||||| ||  ||||| ||||||||||||    
T  27667761 tttaccaaacacatctcattttatcaaaacaaacttataagctagttcaataagctataaactaactattttgtgttaccaaacaca 27667675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 35179928 - 35179814
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||| |||||||||| |||  ||||||||||| ||||||||||| |  || ||||||||| ||||||| ||| | |||    
T  35179928 tataagctattgagaaaagctttttatcaaacacatctcattttatcaaaacaaacttataagctagtccaacaagctataagctagcttttttatgtta 35179829  T
Q  116 ccaaacacaacctat 130  Q
    ||||||||| |||||    
T  35179828 ccaaacacagcctat 35179814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 9223948 - 9223835
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||||||  ||  |||||||||||||||||||| || |  || |||||||||  |||||| ||||| |||    
T  9223948 tataagctagtgagaaaagctttttaccaaacacatcttattttatcaaaacaagcttataagttagtccaacaagctataagttagcttttttgtgtta 9223849  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  9223848 ccaaacacagccta 9223835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 4640127 - 4640195
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||||||||||||||| |  || ||||||||| |||||||||| || |||||||||||||||    
T  4640127 tatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaacc 4640195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 11823639 - 11823580
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || ||||||||||||||||| ||||| ||||||||||||||||    
T  11823639 agcttataagctaatccaacaagctataaactagcttttttgtgttaccaaacacaacct 11823580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 38667299 - 38667187
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaata----agctataaactagcttatttgt 111  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || |    |||||||||||| ||| |||||    
T  38667299 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagttcaacaaactagctataaactaacttttttgt 38667200  T
Q  112 attaccaaacaca 124  Q
     ||||||||||||    
T  38667199 gttaccaaacaca 38667187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 39325508 - 39325603
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgt 111  Q
    ||||||||| || |||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| |||||    
T  39325508 tataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagttcaacaagctataagctagcttttttgt 39325603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 44109945 - 44110031
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| ||||||||||||| ||| | ||||||    
T  44109945 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttatttgtgttatctaacaca 44110031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 44299957 - 44300039
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaa 120  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||| || ||||||||    
T  44299957 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaa 44300039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 18545588 - 18545653
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    ||||||||| || |||||||  ||||||||||||||| |||  |||||||||||||||||||||||    
T  18545588 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagcta 18545653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 41865395 - 41865287
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcct-atcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatt 114  Q
    |||||||| ||| ||||||| | |||||||||||||||| |  | ||| || |||||||||||||||||  || ||||||||| ||||||| ||||| ||    
T  41865395 tataagctcatgagaaaagctcgttaccaaacacatcacgttttcatccaa-caagcttataagctaatccaagaagctataagctagcttttttgtgtt 41865297  T
Q  115 accaaacaca 124  Q
    ||||||||||    
T  41865296 accaaacaca 41865287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 5698615 - 5698508
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||| |||||||||| |||  ||||||| |||||||||||| || |  || ||||||||| ||||||| ||||| |||    
T  5698615 tataagctagtgagaaaagctttttatcaaacacatctcattttatcaaa-caagcttataagttagtccaacaagctataagctagcttttttgtgtta 5698517  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  5698516 ccaaacaca 5698508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 30899415 - 30899521
Alignment:
Q  18 taagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattacc 117  Q
    ||||||| || |||||||  ||||||||||||||  |||  ||||||||||  | ||||||||| |  || ||||||||| ||||||| ||||| |||||    
T  30899415 taagctagtgagaaaagctttttaccaaacacatttcattttatcaaaacagacatataagctagtccaacaagctataagctagcttttttgtgttacc 30899514  T
Q  118 aaacaca 124  Q
    |||||||    
T  30899515 aaacaca 30899521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 2459689 - 2459745
Alignment:
Q  68 aagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  2459689 aagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 2459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 23259169 - 23259085
Alignment:
Q  40 taccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  ||  ||||||||||| ||||||||||| |  || ||||||||| ||| |||||| || ||||||||||||    
T  23259169 taccaaacacatcttattatatcaaaacaaacttataagctagtccaacaagctataagctaacttattcgtgttaccaaacaca 23259085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 27747662 - 27747602
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  27747662 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 27747602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 1190187 - 1190242
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||| ||||||||||||| ||||| ||||||||||||    
T  1190187 agcttataagctaatccaacaagttataaactagcttttttgtgttaccaaacaca 1190242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 30358129 - 30358074
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  30358129 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 30358074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 39325666 - 39325611
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  39325666 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 39325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 42159720 - 42159609
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||| ||||||||||  ||  ||||||||||| | | ||||||| |  || ||||||||| |||||||||| || |||    
T  42159720 tataagctagtgaaaaaagctttttagcaaacacatcttattatatcaaaacaaacatttaagctattccaacaagctataagctagcttattcgtgtta 42159621  T
Q  116 ccaaacacaacc 127  Q
    ||||||||||||    
T  42159620 ccaaacacaacc 42159609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 45900224 - 45900169
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||||||||||| | ||| ||||||||||||    
T  45900224 agcttataagctaatccaacaagctataaactagcttttctgtgttaccaaacaca 45900169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 50586223 - 50586278
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  50586223 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 50586278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 11756885 - 11756971
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||| ||||||||||||| |  || |||  |||| |||||||||| || ||||||||||||    
T  11756885 tttaccaaacacatcttattatatcaaaacgagcttataagctagtccaacaagtcataagctagcttattcgtgttaccaaacaca 11756971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 38058808 - 38058746
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||| |||||||||| |  || ||||||||| ||||||| ||||| |||||||||||||||    
T  38058808 aacaaggttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacaacc 38058746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 40640741 - 40640679
Alignment:
Q  62 caaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||||||| |   ||||||||||| ||| ||||||| | ||||||||||||    
T  40640741 caaaacaagcttataagctagtttgataagctataagctatcttatttctgttaccaaacaca 40640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 43847442 - 43847528
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||| ||||||||||||| |   | || |||||| |||||||||| || ||||||||||||    
T  43847442 tttaccaaacacatcttattatatcaaaactagcttataagctagtccgacaaactataagctagcttattcgtgttaccaaacaca 43847528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 34086294 - 34086201
Alignment:
Q  29 gaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    |||||||  ||||||||||| ||  ||| |||||||||||| |||||||||||||   | || |||||| |||| || ||||| ||||||||||    
T  34086294 gaaaagctttttaccaaacatatttcattctatcaaaacaaacttataagctaatccgacaaactataagctaggttttttgtgttaccaaaca 34086201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 11332897 - 11332837
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||| |  || || |||||||||||||| ||||| |||||||||||| ||||    
T  11332897 agcttataagctagtccaacaaactataaactagcttttttgtgttaccaaacacagccta 11332837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 11490918 - 11490858
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||| |  || || |||||||||||||| ||||| |||||||||||| ||||    
T  11490918 agcttataagctagtccaacaaactataaactagcttttttgtgttaccaaacacagccta 11490858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 38815593 - 38815653
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||| ||| ||||    
T  38815593 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaatacagccta 38815653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 18368725 - 18368838
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  18368725 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 18368824  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  18368825 ccaaacacagccta 18368838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 1789895 - 1789787
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  1789895 tataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 1789796  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  1789795 ccaaacaca 1789787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 191031 - 190919
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||| ||| |  || ||||||||||||| ||| ||||| |||    
T  191031 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataaactagtccaacaagctataaactaacttttttgtgtta 190932  T
Q  116 ccaaacacaacct 128  Q
     |||| |||||||    
T  190931 tcaaatacaacct 190919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 4976632 - 4976524
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||| || |||  ||||||||||||||||||||||| |  || | ||||||| |||| || ||||| |||    
T  4976632 tataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagtccaacaggctataagctagtttttttgtgtta 4976533  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  4976532 ccaaacaca 4976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 18801808 - 18801700
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||| ||| || |||||||  |||||||||||| || |||  |||||||||||||||||||| || |  || ||||||||| ||||||| ||||| |||    
T  18801808 tataaactagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagttagtccaacaagctataagctagcttttttgtgtta 18801709  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  18801708 ccaaacaca 18801700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 15508435 - 15508349
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  |||||||| |||||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  15508435 tttaccaaacacatcttattatatcaaaataagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 15508349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 31603925 - 31604011
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || |||||||||||||||||||||||| |  |  || |||||| ||||||||||||| ||| ||||||||    
T  31603925 tttaccaaacacatcgtattctatcaaaacaagcttataagctagtccagcaaactataagctagcttatttgtgttatcaaacaca 31604011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 32562445 - 32562513
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    ||||||||||| ||||||||||| |  || ||||||||| |||||||||| || |||||||||||||||    
T  32562445 tatcaaaacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaacc 32562513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 13866346 - 13866263
Alignment:
Q  42 ccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaa 125  Q
    ||||||||||| ||| |||||||||| || |||||||||| |  || ||||||||| ||||||| ||| | |||||||||||||    
T  13866346 ccaaacacatctcattctatcaaaactagtttataagctagtccaacaagctataagctagcttttttatgttaccaaacacaa 13866263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 20992309 - 20992371
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatg 131  Q
    |||||||||||||||  || || |||||||||||||| ||||| |||||||||| ||||||||    
T  20992309 agcttataagctaatccaacaaactataaactagcttttttgtgttaccaaacagaacctatg 20992371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 24159324 - 24159238
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || || |||||| ||| |||||| || ||||||||||||    
T  24159324 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaaactataagctaccttattcgtgttaccaaacaca 24159238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 5090118 - 5090183
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||| ||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  5090118 tatcaaaacaaacttataagctagtccaagaagctataagctagcttattcgtgttaccaaacaca 5090183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 25023495 - 25023552
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    |||||||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||    
T  25023495 aacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 25023552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 24119283 - 24119343
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  24119283 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 24119343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 13756364 - 13756419
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||||||||||| || || ||||||||||||    
T  13756364 agcttataagctaatccaacaagctataaactagctttttcgtgttaccaaacaca 13756419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 20645713 - 20645646
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatgtgtaa 136  Q
    |||||||||||||||  || || |||||| ||||||| ||||| |||||||||||| ||||| |||||    
T  20645713 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacacagcctatttgtaa 20645646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 1290468 - 1290382
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||| |  || |||||| || |||||||||||||| |  || ||||||||| ||| ||||||| | ||||||||||||    
T  1290468 tttaccaaacacaacttattctatcataataagcttataagctattctaacaagctataagctaacttatttattttaccaaacaca 1290382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 21860289 - 21860231
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||| ||||||||||    
T  21860289 agcttataagctaatccaacaagctataagctagcttttttgtgttactaaacacaacc 21860231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31259539 - 31259633
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttg 110  Q
    ||||||||| || ||||| |  ||||| ||||||||| |||  |||||||||||||||||||||||    || ||||||||| ||||||| ||||    
T  31259539 tataagctagtgagaaaaactttttactaaacacatctcattttatcaaaacaagcttataagctagcccaacaagctataatctagcttttttg 31259633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 5956530 - 5956417
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||| |||||| ||||||   |||| ||||||| ||  || |||||||||||||||||||| ||| |  || ||| ||||| ||||||||| | | |||    
T  5956530 tataacctaatgggaaaagatttttatcaaacacgtcttattctatcaaaacaagcttataaactagtccaagaagttataagctagcttatctatgtta 5956431  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  5956430 ccaaacacagccta 5956417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 34574608 - 34574697
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||| ||||| ||| |||| | || ||| |||||||||||    
T  34574608 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagttataagctaacttactcgtgttatcaaacacaacc 34574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 21778130 - 21778190
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||| ||||  || | ||||||||||||||| ||||| |||||||||||| ||||    
T  21778130 agcttataagttaatccaacaggctataaactagcttttttgtgttaccaaacacagccta 21778190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 22707346 - 22707286
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| |||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  22707346 agcttataaactaatccaacaagctataagctagcttttttgtgttaccaaacacagccta 22707286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 30411243 - 30411351
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  30411243 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 30411342  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  30411343 ccaaacaca 30411351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 48368982 - 48369068
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| |  || |||||||| |||||||||||||| |||||| |||||    
T  48368982 tttaccaaacacatcacattctatcaaaacaatcttataagctagtccaacaagctatacactagcttatttgtgttaccagacaca 48369068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 19912781 - 19912668
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| |  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  19912781 tataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 19912682  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  19912681 ccaaacacagccta 19912668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 55610771 - 55610658
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||||   ||||||||||||||| |||  ||||||||||||||||||||||| || || ||||||||| |||| || ||||| |||    
T  55610771 tataagctagtgagaaaagttttttaccaaacacatctcattttatcaaaacaagcttataagctagtacaacaagctataagctagtttttttgtgtta 55610672  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  55610671 ccaaacacagccta 55610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 51924112 - 51924025
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaa 125  Q
    ||||||||||||||| |||  ||||||||||||||||||||||| |  || |||||||||||||| || ||||| |||||||||||||    
T  51924112 tttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataaactagtttttttgtgttaccaaacacaa 51924025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 50792429 - 50792515
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || |||||||||||||||||||| || ||||||||||||    
T  50792429 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataaactagcttattcgtgttaccaaacaca 50792515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 202398 - 202290
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  |||||||||||| ||  ||  ||||||| |||||||||||||||||  || ||||||||| ||||||| ||||| |||    
T  202398 tataagctagtgagaaaagctttttaccaaacacgtcttattttatcaaagcaagcttataagctaatccaacaagctataagctagcttttttgtgtta 202299  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  202298 ccaaacaca 202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 26923530 - 26923638
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| ||| |||||||||| ||||||||||||| |  || ||| ||||| ||||||| ||| | |||    
T  26923530 tataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagcttataagctagtttaacaagttataagctagcttttttatgtta 26923629  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  26923630 ccaaacaca 26923638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30653606 - 30653499
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||| || || |||||||  |||||||||||| || |||  |||||||||||||||||||||||||  || ||||||| ||||||||| ||||| |||    
T  30653606 tataagatagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctaatccaacaagctat-aactagcttttttgtgtta 30653508  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  30653507 ccaaacaca 30653499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 45549761 - 45549653
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||  |||  |||||||||||||||||||||||    || ||||||||| ||||||| ||||| |||    
T  45549761 tataagctagtgagaaaagctttttaccaaacacatttcattttatcaaaacaagcttataagctagcccaacaagctataagctagcttttttgtgtta 45549662  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  45549661 ccaaacaca 45549653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 2390261 - 2390374
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||||||| ||||| |  |||||||||||| || ||| || ||||||||| |||||||| || |  || ||||||||| ||||||| ||||| |||    
T  2390261 tataagctaatgagaaaaactttttaccaaacacgtctcattctttcaaaacaaacttataagttagtccaagaagctataagctagcttttttgtgtta 2390360  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  2390361 ccaaacacagccta 2390374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 19870025 - 19869960
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  |||||||||||| |||||||||| || ||||||||||||    
T  19870025 tatcaaaacaagcttataagctagttcaataagctataagctagcttattcgtgttaccaaacaca 19869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 48953116 - 48953027
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  ||||||||||||||||||||||| |  || ||||||||| |||||||||  || |||||||||||||||    
T  48953116 tttaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagctataagctagcttatccgtgttaccaaacacaacc 48953027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 10658874 - 10658982
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||| ||||  ||  ||||||||||||||||||||||| |  |||||||||||| |||||| ||| || |||    
T  10658874 tataagctagtgaaaaaagctttttaccaaacgcatcttattatatcaaaacaagcttataagctagtccaataagctataagctagctaattcgtgtta 10658973  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  10658974 ccaaacaca 10658982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 10873019 - 10873127
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||| ||||  ||  ||||||||||||||||||||||| |  |||||||||||| |||||| ||| || |||    
T  10873019 tataagctagtgaaaaaagctttttaccaaacgcatcttattatatcaaaacaagcttataagctagtccaataagctataagctagctaattcgtgtta 10873118  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  10873119 ccaaacaca 10873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 28459720 - 28459608
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| |  |||||||  ||||||||||||||| |||  |||||||||||||||||||| || |  || || |||||||||| ||| ||||| ||     
T  28459720 tataagctagtaagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagatagtccaacaaactataaactaacttttttgtgttg 28459621  T
Q  116 ccaaacacaacct 128  Q
    |||||||||||||    
T  28459620 ccaaacacaacct 28459608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 1771831 - 1771937
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||| ||||||||||||||| |  || ||||||||| ||| ||| ||||| |||    
T  1771831 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaagcaagcttataagctagtccaacaagctataagctatcttttttgtgtta 1771930  T
Q  116 ccaaaca 122  Q
     ||||||    
T  1771931 tcaaaca 1771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 43590620 - 43590534
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  ||  ||||||||||| ||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  43590620 tttaccaaacacatcttattatatcaaaacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 43590534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 50790932 - 50790826
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  ||||||  || ||||||||||||  ||  ||||||||||||||||||||||| |  || ||| ||||| |||||||||| || |||    
T  50790932 tataagctaatgaaaaaagcttttcaccaaacacatcttattatatcaaaacaagcttataagctagtccaacaagttataagctagcttattcgtgtta 50790833  T
Q  116 ccaaaca 122  Q
    |||||||    
T  50790832 ccaaaca 50790826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 318683 - 318748
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    |||||||||||| |||||||  |||||||||||| || |||  |||||||||||||||||||||||    
T  318683 tataagctaatgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagcta 318748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 39840239 - 39840299
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||||||||    
T  39840239 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacaaccta 39840299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 7113502 - 7113614
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaa----caagcttataagctaatagaataagctataaactagcttatttgt 111  Q
    ||||||||| || |||||||  ||||||||||||||| ||| |||||||||    | ||||||||||||| |  || ||||||||| ||||||| ||| |    
T  7113502 tataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagctagcttataagctagtccaacaagctataagctagcttttttat 7113601  T
Q  112 attaccaaacaca 124  Q
     ||||||||||||    
T  7113602 gttaccaaacaca 7113614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 19870985 - 19871072
Alignment:
Q  37 ctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||  ||  |||||||||||| |||||||||| |  |  ||||||||| |||||||||| || ||||||||||||    
T  19870985 ctttaccaaacacatcttattatatcaaaacaaggttataagctagtccagcaagctataagctagcttattcgtgttaccaaacaca 19871072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 81
Target Start/End: Complemental strand, 31997918 - 31997875
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  31997918 tttatcaaacacatcacattctatcaaaacaagcttataagcta 31997875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 124
Target Start/End: Complemental strand, 27531916 - 27531830
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||| ||||||  || |||||||||||||||||||| ||| |  || |||||||||  |||| ||||||| ||||||||||||    
T  27531916 tttaccaatcacatcgtattctatcaaaacaagcttataaactagtccaacaagctataagttagcctatttgtgttaccaaacaca 27531830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 19801907 - 19801968
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctat 130  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| |||||    
T  19801907 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagcctat 19801968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 20986359 - 20986274
Alignment:
Q  39 ttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||| |||  |||||||||||| ||||||| || |  || |||||||||  |||||||||| | ||||||||||||    
T  20986359 ttaccaaacacatctcattttatcaaaacaagtttataagttagtccaacaagctataagttagcttatttatgttaccaaacaca 20986274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 25687094 - 25686981
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    |||||||| ||| |||||||   |||||||||||||||| |  |   | |||||||||||||||||||  || || ||||||| |||||| ||||| |||    
T  25687094 tataagctcatgagaaaagcttgttaccaaacacatcacgttttcatacaacaagcttataagctaatccaaaaaactataaattagcttttttgtgtta 25686995  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  25686994 ccaaacacagccta 25686981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 24152711 - 24152671
Alignment:
Q  89 aagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  24152711 aagctataagctagcttatttgtgttaccaaacacaaccta 24152671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 30996710 - 30996746
Alignment:
Q  93 tataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||||||||| |||||||||||||||||    
T  30996710 tataaactagcttatttgtgttaccaaacacaaccta 30996746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 6238243 - 6238188
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  6238243 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 6238188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 33984143 - 33984088
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  33984143 agcttataagctaattcaacaagctataagctagcttttttgtgttaccaaacaca 33984088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 49646090 - 49646027
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    |||||||||||||||||||||||||  || | ||||||| ||| |||||| || ||||||||||    
T  49646090 tatcaaaacaagcttataagctaatccaacaggctataagctaacttattcgtgttaccaaaca 49646027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 53284062 - 53284007
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  53284062 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 53284007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Original strand, 14269864 - 14269922
Alignment:
Q  66 acaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||| |  || ||||||||| |||||||||| || ||||||||||||    
T  14269864 acaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 14269922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 37114478 - 37114532
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacac 123  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||    
T  37114478 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacac 37114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 45618142 - 45618060
Alignment:
Q  43 caaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaa 125  Q
    |||||||||| ||| |||| ||||||| ||||||||||| |  || || | |||| ||||||||||| | |||||||||||||    
T  45618142 caaacacatcgcattctattaaaacaaacttataagctagtctaacaaaccataagctagcttatttatgttaccaaacacaa 45618060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 55660610 - 55660548
Alignment:
Q  60 atcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    ||||||||||| |||||||||| |  || ||||||||| ||||||||||| | ||||||||||    
T  55660610 atcaaaacaagtttataagctagtccaacaagctataagctagcttatttatgttaccaaaca 55660548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 28778609 - 28778556
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||| ||||  || ||||||||||||||||||||| | ||||||||||||    
T  28778609 cttataagttaatctaacaagctataaactagcttatttatgttaccaaacaca 28778556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Original strand, 49335237 - 49335290
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  49335237 cttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 49335290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 49648859 - 49648916
Alignment:
Q  64 aaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaac 121  Q
    |||||||||||||||||| |  || ||||||||| |||||||||| || |||||||||    
T  49648859 aaacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaac 49648916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 318740 - 318776
Alignment:
Q  93 tataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  318740 tataagctagcttatttgtgttaccaaacacaaccta 318776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 30653331 - 30653395
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||||||| |  || |||| |||| ||| ||| ||||| |||||||||||||||||    
T  30653331 aacaagcttataagctagtccaacaagccataagctaacttttttgtgttaccaaacacaaccta 30653395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 38005631 - 38005551
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattacca 118  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||| |  || ||||||||| ||| ||| ||| | ||||||    
T  38005631 tttaccaaacacatctcattctatcaaaacaaacttataaactagtccaacaagctataagctaacttttttatgttacca 38005551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 45561360 - 45561419
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||    
T  45561360 agcttataagctaatccaacaagctataagctagctt-tttgtgttaccaaacacagccta 45561419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 38 - 128
Target Start/End: Complemental strand, 11575708 - 11575618
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||| |  || ||||||||| ||||||| ||||| ||||||||||||||||    
T  11575708 tttaccaaacacatctcattctatcaaaacaaacttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacaacct 11575618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 13019102 - 13018994
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||||||||||| ||||||||||| |  || ||| ||||| ||||||| ||||| |||    
T  13019102 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaaacttataagctagtccaacaagttataagctagcttttttgtgtta 13019003  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  13019002 ccaaacaca 13018994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 1924052 - 1923942
Alignment:
Q  19 aagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattacca 118  Q
    |||||| || |||||||  |||||||||||| || |||  ||||||| ||||||||||||||| |  || ||||||||| ||||||| ||||| ||||||    
T  1924052 aagctagtgagaaaagctttttaccaaacacgtctcattttatcaaagcaagcttataagctagtccaacaagctataagctagcttttttgtgttacca 1923953  T
Q  119 aacacaaccta 129  Q
    |||||| ||||    
T  1923952 aacacagccta 1923942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 4559471 - 4559584
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||||||  |||||   ||||||||||||||| ||| ||||||| |||||||||||||||  |  || ||||||||| ||||||| ||| | |||    
T  4559471 tataagctaatgaaaaaagttttttaccaaacacatctcattctatcaagacaagcttataagcttgtccaacaagctataagctagcttttttatgtta 4559570  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  4559571 ccaaacacagccta 4559584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 7948429 - 7948494
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagcta 81  Q
    |||||||||||| |||||||  ||||||||||||||| |||  |||||||||||||||||||||||    
T  7948429 tataagctaatgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagcta 7948494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 35766618 - 35766553
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctat 130  Q
    |||||||||||||||||||  || ||||||||| ||||||| ||||||||| ||||||||||||||    
T  35766618 aacaagcttataagctaatccaagaagctataagctagcttttttgtattatcaaacacaacctat 35766553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 8520675 - 8520567
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||||   ||||||||||||||| ||| |||||||||| ||||||||||||| |  || ||||||||  ||||||| ||| | |||    
T  8520675 tataagctagtgagaaaagatttttaccaaacacatctcattctatcaaaactagcttataagctagtctaacaagctatatgctagcttttttatgtta 8520576  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  8520575 ccaaacaca 8520567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 20768859 - 20768971
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| |  |||||||  ||||||||||||||| |||  |||||||||||||||||||| || |  || || |||||||||| ||| ||||| ||     
T  20768859 tataagctagtaagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataagatagtccaacaaactataaactaacttttttgtgttg 20768958  T
Q  116 ccaaacacaacct 128  Q
    |||||||||||||    
T  20768959 ccaaacacaacct 20768971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 20017297 - 20017408
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| |  ||||||||||||||| |||  ||||||||||||||||||||||| |  || ||||||||| |||| || ||||| |||    
T  20017297 tataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataagctagtccaacaagctataagctagtttttttgtgtta 20017396  T
Q  116 ccaaacacaacc 127  Q
     ||||| |||||    
T  20017397 tcaaacgcaacc 20017408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 3703508 - 3703454
Alignment:
Q  68 aagcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    ||||||||||||||||| || ||||||||||||||||||||| | ||||||||||    
T  3703508 aagcttataagctaatataacaagctataaactagcttatttatgttaccaaaca 3703454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 15524448 - 15524359
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  ||  |||||||||||| |||||||||| |  || ||||||||| |||||||||| || |||| ||||||||||    
T  15524448 tttaccaaacacatcttattatatcaaaacaaggttataagctagtctaacaagctataagctagcttattcgtgttacgaaacacaacc 15524359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 34589970 - 34590032
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatg 131  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||||    
T  34589970 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagcctatg 34590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 37530789 - 37530851
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacctatg 131  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| |||||||||||| ||||||    
T  37530789 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagcctatg 37530851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 3033459 - 3033390
Alignment:
Q  58 ctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||| ||||||||||||| |  || ||||||||| ||||||| ||| | |||||||||||||||    
T  3033459 ctatcaaaactagcttataagctagtccaacaagctataagctagcttttttatgttaccaaacacaacc 3033390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 8520562 - 8520497
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    ||||||||||||||||||||||| |  || |||||||||  ||||||||| || ||||||||||||    
T  8520562 tatcaaaacaagcttataagctagtccaacaagctataagttagcttattcgtgttaccaaacaca 8520497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 3078532 - 3078640
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||| |  |||||||||||| || |||  |||||||||||| |||||||||| |  || ||| ||||| ||| ||| ||||| |||    
T  3078532 tataagctagtgagaaaaactttttaccaaacacgtctcattttatcaaaacaagtttataagctagtccaacaagttataagctaacttttttgtgtta 3078631  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  3078632 ccaaacaca 3078640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 5050146 - 5050201
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||||||| | ||||||||||||    
T  5050146 agcttataagctaatccaacaagctataagctagcttatttatgttaccaaacaca 5050201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 6789658 - 6789713
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  6789658 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 6789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 7615046 - 7615101
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || |||||||||  |||||| ||||||||||||||||||    
T  7615046 agcttataagctaatccaacaagctataaggtagcttttttgtattaccaaacaca 7615101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 15498700 - 15498645
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  15498700 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 15498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 24171420 - 24171365
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  24171420 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 24171365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 26286177 - 26286240
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||  ||||  ||||||||||||  ||||||||| | |||||||||||||||||    
T  26286177 aacaagcttataacttaatccaataagctataaggtagcttattggcattaccaaacacaacct 26286240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 29525365 - 29525420
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  29525365 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 29525420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 41734313 - 41734368
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  41734313 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 41734368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 42422862 - 42422807
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||| ||||  || ||||||||||||||||| ||||| ||||||||||||    
T  42422862 agcttataagttaattcaacaagctataaactagcttttttgtgttaccaaacaca 42422807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 42709366 - 42709311
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  42709366 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 42709311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 76469 - 76411
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||| |||||||||||    
T  76469 agcttataagctaatccaaaaagctataagctagcttttttgtgttatcaaacacaacc 76411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 25881562 - 25881504
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacc 127  Q
    |||||||||||||||  || ||||||||| ||||| ||||| | |||||||||||||||    
T  25881562 agcttataagctaatctaacaagctataagctagcctatttatgttaccaaacacaacc 25881504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 3033384 - 3033335
Alignment:
Q  59 tatcaaaacaagcttataagctaatagaataagctataaactagcttatt 108  Q
    ||||||||||||||||||||||| |  || ||||||||| ||||||||||    
T  3033384 tatcaaaacaagcttataagctagtctaacaagctataagctagcttatt 3033335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 16218352 - 16218405
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaaca 122  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||    
T  16218352 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 16218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 17645359 - 17645306
Alignment:
Q  71 cttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||  || ||||||||| ||||||||||| | ||||||||||||    
T  17645359 cttataagctaatctaacaagctataagctagcttatttatgttaccaaacaca 17645306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 23590691 - 23590634
Alignment:
Q  72 ttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||||||  || ||| ||||||||| ||| ||||| |||||||||||||||||    
T  23590691 ttataagctaatccaacaagttataaactatcttttttgtgttaccaaacacaaccta 23590634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 36944280 - 36944344
Alignment:
Q  65 aacaagcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    |||||||||||||| || |  || ||||||||| ||||||| ||| | |||||||||||||||||    
T  36944280 aacaagcttataagttagtctaacaagctataagctagcttttttatgttaccaaacacaaccta 36944344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 36959501 - 36959461
Alignment:
Q  89 aagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| ||||||| ||||| |||||||||||||||||    
T  36959501 aagctataagctagcttttttgtgttaccaaacacaaccta 36959461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 41356307 - 41356263
Alignment:
Q  38 tttaccaaacacatcacatcctatcaaaacaagcttataagctaa 82  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||    
T  41356307 tttatcaaacacatcccattctatcaaaacaagcttataaactaa 41356263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 4257 - 4144
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||| ||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  4257 tataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 4158  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  4157 ccaaacacagccta 4144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11997 - 11884
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || |||||||  ||||||||||||||| |||  ||| ||||||||||||||||||| |  || ||||||||| ||||||| ||||| |||    
T  11997 tataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataagctagtccaacaagctataagctagcttttttgtgtta 11898  T
Q  116 ccaaacacaaccta 129  Q
    ||||||||| ||||    
T  11897 ccaaacacagccta 11884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 94395 - 94501
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| ||  ||||||  |||||||||||||||  ||  |||||||||||| |||||||||| |  || ||||||||| |||||||||| || |||    
T  94395 tataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagtttataagctagttcaacaagctataagctagcttattcgtgtta 94494  T
Q  116 ccaaaca 122  Q
    |||||||    
T  94495 ccaaaca 94501  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 14235 - 14295
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaaccta 129  Q
    ||||||||| |||||  ||||| |||||| ||||||| ||||| |||||||||||||||||    
T  14235 agcttataatctaatccaataaactataagctagcttttttgtgttaccaaacacaaccta 14295  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 57893 - 57948
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacaca 124  Q
    |||||||||||||||  || ||||||||| ||||||| ||||| ||||||||||||    
T  57893 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 57948  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 157659 - 157718
Alignment:
Q  69 agcttataagctaatagaataagctataaactagcttatttgtattaccaaacacaacct 128  Q
    |||||||||||||||  || || |||||| ||||||||||| | ||||||||||||||||    
T  157659 agcttataagctaatctaacaaactataagctagcttatttatgttaccaaacacaacct 157718  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 76352 - 76244
Alignment:
Q  16 tataagctaatgtgaaaagcgctttaccaaacacatcacatcctatcaaaacaagcttataagctaatagaataagctataaactagcttatttgtatta 115  Q
    ||||||||| || ||||||   || |||||||||||| ||| ||||||||||||  |||||||||| |  || || |||||| ||| ||| ||| | |||    
T  76352 tataagctagtgagaaaagtttttcaccaaacacatctcattctatcaaaacaaatttataagctagtccaacaaactataagctaccttttttatgtta 76253  T
Q  116 ccaaacaca 124  Q
    |||||||||    
T  76252 ccaaacaca 76244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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