View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1407_low_6 (Length: 419)
Name: NF1407_low_6
Description: NF1407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1407_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 96 - 344
Target Start/End: Original strand, 751048 - 751290
Alignment:
| Q |
96 |
gattctcccatttcatttgtttaaggggtcaaactcttttactactcgtataaatccattatttgttatatgctgggattgaaccctatatatctttagt |
195 |
Q |
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| T |
751048 |
gattctcccatttcatttgtttaaggggtcgaactcttttactactcgtgtaaatccattatttgttatatgctgggattgaaccctatatatctttagt |
751147 |
T |
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| Q |
196 |
gtcccaactcataatgttagaatgtacatctgagaatttgataactctattcgatttcaagcatagaatacttttataataataccttgtaataaagagt |
295 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
751148 |
------actcataatgttagaatgtacatctgagaatttgataactctattcgatttcaagcatagaatacttttataataataccttgtaataaagagt |
751241 |
T |
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| Q |
296 |
agctatgggatgatttaatttgaatgtcgtatgaactatcttctatatt |
344 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
751242 |
agctatgggatgatttaatttgaatgtcgtatgaactatcttctatatt |
751290 |
T |
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