View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1407_low_8 (Length: 365)
Name: NF1407_low_8
Description: NF1407
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1407_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 98 - 316
Target Start/End: Original strand, 29671853 - 29672071
Alignment:
| Q |
98 |
ccacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattctttgataaaaccccgaacctcgagactttctcc |
197 |
Q |
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| T |
29671853 |
ccacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattcttggataaaaccccgaacctcgagactttctcc |
29671952 |
T |
|
| Q |
198 |
ttatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctcagtgatcgcgaagt |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29671953 |
ttatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctcagtgatcgcgaagt |
29672052 |
T |
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| Q |
298 |
catgcatcatagtaggctg |
316 |
Q |
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||||||||||||||||||| |
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| T |
29672053 |
catgcatcatagtaggctg |
29672071 |
T |
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