View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14081_low_1 (Length: 973)

Name: NF14081_low_1
Description: NF14081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14081_low_1
NF14081_low_1
[»] chr4 (13 HSPs)
chr4 (373-888)||(34137672-34138195)
chr4 (154-351)||(34139108-34139306)
chr4 (11-157)||(34139330-34139476)
chr4 (160-311)||(34136197-34136348)
chr4 (11-157)||(34136378-34136524)
chr4 (11-154)||(34142013-34142156)
chr4 (160-214)||(34141926-34141980)
chr4 (487-583)||(5535753-5535848)
chr4 (492-583)||(46462419-46462510)
chr4 (495-583)||(21586931-21587019)
chr4 (489-552)||(6087503-6087566)
chr4 (496-550)||(12596748-12596802)
chr4 (513-583)||(23208677-23208747)
[»] chr2 (2 HSPs)
chr2 (489-579)||(29765707-29765797)
chr2 (514-583)||(10099591-10099660)
[»] chr7 (6 HSPs)
chr7 (513-555)||(34564994-34565036)
chr7 (513-576)||(27163196-27163259)
chr7 (484-583)||(37491275-37491374)
chr7 (489-583)||(43813132-43813226)
chr7 (489-554)||(3967773-3967838)
chr7 (518-583)||(6250636-6250701)
[»] chr1 (3 HSPs)
chr1 (494-561)||(44673898-44673965)
chr1 (494-552)||(6340640-6340698)
chr1 (495-547)||(29204487-29204537)
[»] chr3 (1 HSPs)
chr3 (489-554)||(39682616-39682681)
[»] chr5 (3 HSPs)
chr5 (508-583)||(14631042-14631117)
chr5 (508-583)||(18942025-18942100)
chr5 (534-583)||(30489135-30489184)
[»] scaffold0014 (1 HSPs)
scaffold0014 (513-583)||(133176-133246)
[»] chr6 (1 HSPs)
chr6 (486-583)||(7158260-7158357)


Alignment Details
Target: chr4 (Bit Score: 397; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 373 - 888
Target Start/End: Complemental strand, 34138195 - 34137672
Alignment:
Q  373 ttattttacatatttattgaataatttatgtatctcatttttaatataggtcaaatataaagaagacaagttatcaatattttgtattcaaagtctctaa 472  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| | |    
T  34138195 ttatttttcatatttattgaataatttatgtatttcatttttaatataggtcaaataga--gaagacaagttatcaatattttgtattcaaagtctttca 34138098  T
Q  473 ataatattatttttgatcacaattataagcaaacatttaattttt-aggttaattgaataagtgatatatgtggtctatattatcaactataaacatcat 571  Q
    ||||||||||||   |||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  34138097 ataatattatttccaatcataattataagcaaaaatttatttttttaggttaattgaataagtgatatactaggtctatattatcaactataaacatcat 34137998  T
Q  572 ttattcaatgaaatcatatagtaatgttagtgacatcacatgtaactaatgctaactaactacgttatatgagatatgattgcattaagtgagattact- 670  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  34137997 ttattcaatgaaatgatatagtaatgttagtgacatcacatgtaactaatgctaactaactacgttatatgagatatgattgcattaagtgagattacta 34137898  T
Q  671 ------accgttactaatattattaa-ttgttaatatttgattaatttggtcaatgctcagttaatattc-tttttaggaagtaagtaataaaattagtt 762  Q
          |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34137897 ccgactaccgttactaatattattaatttgttaatatttgattaatttggtcaatgctcagttaatattcttttttaggaagtaagtaataaaattagtt 34137798  T
Q  763 tttgttcatatttttcacaataagcacgagagaaaagtcacatatatgctctaaaactagtctagattcaatgtatatatataacccaataatactggtt 862  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  34137797 tttgttcatatttttcacaataagcacgagagaaaagtcacatatatgctctaaaactagtctagattcaatgtatatatataactcgataatactggtt 34137698  T
Q  863 ttgctcttgcaaattttcctacaaat 888  Q
    ||||||||||||||||||||||||||    
T  34137697 ttgctcttgcaaattttcctacaaat 34137672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 6e-83
Query Start/End: Original strand, 154 - 351
Target Start/End: Complemental strand, 34139306 - 34139108
Alignment:
Q  154 gtaacctcaagaaacaagaagaggagaatcttcaaatttatcattata--agctaccttagagaaagatattttaataaatgtattacttagctcatgta 251  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34139306 gtaacttcaagaaacaagaagaggagaatcttcaaatttatcattatataagctaccttagagaaagatattttaataaatgtatgacttagctcatgta 34139207  T
Q  252 aacaaccaaagattgatcggtgtttctgaaatgagcaactggctacagtcaaacttgctattagaattactgggtgcagtatgtatgcaatttatctcat 351  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||||||||||||    
T  34139206 aacaaccaaagattgatcggtgtttctaaaatgagcaactggctacaatcaaatttg-tattagaattactgggtgcattatgtatgcaatttatctcat 34139108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 34139476 - 34139330
Alignment:
Q  11 ggagcacagagcattggtgaacaaggagaaagaaagattttctattccattctttttcaacccaggatatgatattgaaatcaagcctttggaggagctt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34139476 ggagcacagagcattggtgaacaaggagaaagaaagattttctattccattctttttcaacccaggatatgatattgaaatcaagcctttggaggagctt 34139377  T
Q  111 attaacgagcaaaacccttcaaaatataagccttataaatggggtaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  34139376 attaacgagcaaaacccttcaaaatataagccttataaatggggtaa 34139330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 160 - 311
Target Start/End: Complemental strand, 34136348 - 34136197
Alignment:
Q  160 tcaagaaacaagaagaggagaatcttcaaatttatcattataagctaccttagagaaagatattttaataaatgtattacttagctcatgtaaacaacca 259  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||||||| || |||||||    
T  34136348 tcaagaaacaagatgaggagaatcttcaaatttatcattataagctacagtagagaaagatagtttaataaatgtatcacttagctcatttacacaacca 34136249  T
Q  260 aagattgatcggtgtttctgaaatgagcaactggctacagtcaaacttgcta 311  Q
    |||||||||| ||||||||||||||||  | ||||| || ||||| ||||||    
T  34136248 aagattgatcagtgtttctgaaatgagtgagtggctgcaatcaaatttgcta 34136197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 34136524 - 34136378
Alignment:
Q  11 ggagcacagagcattggtgaacaaggagaaagaaagattttctattccattctttttcaacccaggatatgatattgaaatcaagcctttggaggagctt 110  Q
    |||||| |||| | ||||||||||||||||||| || ||||||||||||||||| ||||| |||||| |||||  |||||||||||||||||||||||||    
T  34136524 ggagcatagagtaatggtgaacaaggagaaagagaggttttctattccattcttcttcaatccaggacatgatgctgaaatcaagcctttggaggagctt 34136425  T
Q  111 attaacgagcaaaacccttcaaaatataagccttataaatggggtaa 157  Q
    |  ||  |||||||| || ||||||||||||| ||||||||||||||    
T  34136424 acaaataagcaaaactctccaaaatataagccatataaatggggtaa 34136378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 34142156 - 34142013
Alignment:
Q  11 ggagcacagagcattggtgaacaaggagaaagaaagattttctattccattctttttcaacccaggatatgatattgaaatcaagcctttggaggagctt 110  Q
    ||||||||||||  | |||| ||  ||||| ||||| ||||||||||| ||||||||   ||||||||||||   |||| |||| ||||| || ||||||    
T  34142156 ggagcacagagcgattgtgagcacagagaaggaaaggttttctattcccttctttttattcccaggatatgacgctgaagtcaaaccttttgaagagctt 34142057  T
Q  111 attaacgagcaaaacccttcaaaatataagccttataaatgggg 154  Q
    || || |||||||||||||||||||||| ||| |||||||||||    
T  34142056 ataaatgagcaaaacccttcaaaatataggccatataaatgggg 34142013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 34141980 - 34141926
Alignment:
Q  160 tcaagaaacaagaagaggagaatcttcaaatttatcattataagctaccttagag 214  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  34141980 tcaagaaacaagatgtggagaatcttcaaatttatcattataagctaccctagag 34141926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 583
Target Start/End: Complemental strand, 5535848 - 5535753
Alignment:
Q  487 gatcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||| |||||||||||| ||| | || ||||||| ||| ||||| |||| ||||||||||||| ||| ||||| | |||||||||||| ||||||    
T  5535848 gatcactattataagcaaaaattgacttgttaggttcattcaataactgatgtatgtggtctata-tataaactacatacatcatttattgaatgaa 5535753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 492 - 583
Target Start/End: Complemental strand, 46462510 - 46462419
Alignment:
Q  492 caattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||||||||||   || | |||||||||| ||||||||| |||| ||||| |||| |||||| ||| ||| |||||||||||| ||||||    
T  46462510 caattataagcaatttttcactttttaggttcattgaataaatgatgtatgtagtctttattataaaccatatacatcatttatttaatgaa 46462419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 495 - 583
Target Start/End: Original strand, 21586931 - 21587019
Alignment:
Q  495 ttataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||||||||  |||| ||||||||| |||| ||||| |||| ||||||  |||||||||  |||| | |||||||||||| ||||||    
T  21586931 ttataagcaaaagtttattttttaggtaaattcaataaatgatgtatgtgtcctatattatagactacatacatcatttattgaatgaa 21587019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 552
Target Start/End: Complemental strand, 6087566 - 6087503
Alignment:
Q  489 tcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatat 552  Q
    ||||||||||||||||| |||||||||| || || ||| ||||| |||| ||||| ||||||||    
T  6087566 tcacaattataagcaaaaatttaattttcagatttattcaataaatgatgtatgtagtctatat 6087503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 496 - 550
Target Start/End: Complemental strand, 12596802 - 12596748
Alignment:
Q  496 tataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctat 550  Q
    ||||| |||| ||||| |||||||||| ||| ||||| |||||||||||||||||    
T  12596802 tataaacaaaaatttactttttaggttcattcaataaatgatatatgtggtctat 12596748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 513 - 583
Target Start/End: Complemental strand, 23208747 - 23208677
Alignment:
Q  513 tttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    ||||||||||| |||||||| |||||||| || |||||||||| || || | |||||| |||| |||||||    
T  23208747 tttttaggttagttgaataactgatatatctgatctatattataaattaaatacatcaattatacaatgaa 23208677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 489 - 579
Target Start/End: Complemental strand, 29765797 - 29765707
Alignment:
Q  489 tcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaa 579  Q
    |||||||||||| |||| ||  | ||||||| || ||||||||||||||||||| |||||||||||| ||| ||| | |||||||||||||    
T  29765797 tcacaattataaccaaaaatcaactttttagattcattgaataagtgatatatgcggtctatattataaaccatatatatcatttattcaa 29765707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 583
Target Start/End: Complemental strand, 10099660 - 10099591
Alignment:
Q  514 ttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    ||||||||| ||| ||| | |||||||||||||||||||||| ||| | | |||||||| ||| ||||||    
T  10099660 ttttaggttcattcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaa 10099591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 555
Target Start/End: Complemental strand, 34565036 - 34564994
Alignment:
Q  513 tttttaggttaattgaataagtgatatatgtggtctatattat 555  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  34565036 tttttaggttaattgaataagtgatgtatgtggtctatattat 34564994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 513 - 576
Target Start/End: Original strand, 27163196 - 27163259
Alignment:
Q  513 tttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttatt 576  Q
    |||||||||| ||||||||| |||| ||||||||||||||||| ||| | | ||||||||||||    
T  27163196 tttttaggttcattgaataaatgatgtatgtggtctatattataaaccacatacatcatttatt 27163259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 583
Target Start/End: Original strand, 37491275 - 37491374
Alignment:
Q  484 tttgatcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||| |||| |||||||||||| ||||| ||||||| || ||| ||||| |||| ||||| |||||||| |   || ||| |||||||||||| ||||||    
T  37491275 tttggtcactattataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaa 37491374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 489 - 583
Target Start/End: Original strand, 43813132 - 43813226
Alignment:
Q  489 tcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||| |||||||||||| ||||||||||||| || ||| ||||| |||  ||||| ||||||| |||  || | | |||||||||||| ||||||    
T  43813132 tcactattataagcaaaaatttaatttttagattcattcaataaatgaagtatgtagtctataatattgaccacatacatcatttattgaatgaa 43813226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 489 - 554
Target Start/End: Complemental strand, 3967838 - 3967773
Alignment:
Q  489 tcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatatta 554  Q
    |||| |||||||||||| |  || |||||||||| ||||||||| |||| ||||||| ||||||||    
T  3967838 tcactattataagcaaaaaactactttttaggttcattgaataaatgatgtatgtggactatatta 3967773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 583
Target Start/End: Original strand, 6250636 - 6250701
Alignment:
Q  518 aggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    ||||| ||| ||||| ||||||||||||||||||||||  |||  | |||||||||||| ||||||    
T  6250636 aggtttattcaataaatgatatatgtggtctatattatatactgcatacatcatttattaaatgaa 6250701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000009; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 494 - 561
Target Start/End: Original strand, 44673898 - 44673965
Alignment:
Q  494 attataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaacta 561  Q
    ||||||| |||| ||||| |||||||||| ||| ||||| ||||||||||||||||||| || |||||    
T  44673898 attataaacaaaaatttattttttaggtttatttaataaatgatatatgtggtctatataataaacta 44673965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 6340698 - 6340640
Alignment:
Q  494 attataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatat 552  Q
    |||||||||||| ||| | |||||||||| ||| ||||| ||||||||||||| |||||    
T  6340698 attataagcaaaaattaactttttaggttcattcaataaatgatatatgtggtttatat 6340640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 547
Target Start/End: Complemental strand, 29204537 - 29204487
Alignment:
Q  495 ttataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtc 547  Q
    |||||||||||  |||||||||||| || ||||||||| ||||||||||||||    
T  29204537 ttataagcaaa--tttaatttttagatttattgaataaatgatatatgtggtc 29204487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 489 - 554
Target Start/End: Original strand, 39682616 - 39682681
Alignment:
Q  489 tcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatatta 554  Q
    |||| |||||||| ||| | ||| |||||||||| ||||||||| |||| ||||||||||||||||    
T  39682616 tcactattataagtaaaaaattattttttaggttcattgaataaatgatgtatgtggtctatatta 39682681  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 14631117 - 14631042
Alignment:
Q  508 tttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||||||||| || |||||||||||||| |||||||| |||||| |  |||| | | || ||||||||||||||    
T  14631117 tttaatttttagatttattgaataagtgatgtatgtggtatatattctagactacatatattatttattcaatgaa 14631042  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 583
Target Start/End: Complemental strand, 18942100 - 18942025
Alignment:
Q  508 tttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||| |||||||||| ||| ||| | |||| ||||||||||||||||| ||| ||| |||||||| ||| ||||||    
T  18942100 tttattttttaggttcattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaa 18942025  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 583
Target Start/End: Complemental strand, 30489184 - 30489135
Alignment:
Q  534 tgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||||||||||||||||||| ||||||| |||| ||| ||| ||||||    
T  30489184 tgatatatgtggtctatattatgaactatatacataattaattaaatgaa 30489135  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 513 - 583
Target Start/End: Complemental strand, 133246 - 133176
Alignment:
Q  513 tttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    |||||||||| |||||||||   || |||||||||||||||||  |||||  |||||||||||| ||||||    
T  133246 tttttaggttcattgaataaacaatgtatgtggtctatattatagactatgtacatcatttattgaatgaa 133176  T

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Target: chr6 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 583
Target Start/End: Original strand, 7158260 - 7158357
Alignment:
Q  486 tgatcacaattataagcaaacatttaatttttaggttaattgaataagtgatatatgtggtctatattatcaactataaacatcatttattcaatgaa 583  Q
    ||||||||| |||||||||| || ||  |||||| || ||| ||||| |||| |||||||||| |||| |  || ||| |||||||||||| ||||||    
T  7158260 tgatcacaaatataagcaaaaatctatgttttagatttattcaataaatgatgtatgtggtctttattgtagacaatatacatcatttattgaatgaa 7158357  T

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