View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14081_low_14 (Length: 306)
Name: NF14081_low_14
Description: NF14081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14081_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 148; Significance: 4e-78; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 31 - 287
Target Start/End: Complemental strand, 40515714 - 40515475
Alignment:
| Q |
31 |
agtagcaaaggacaatcatagccacggctcaaccttaagaaattccaatccaccaccaatattttcatcaccagcggtccattgaaaacagccagtaaga |
130 |
Q |
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| T |
40515714 |
agtagccaaggacaatcatagccacggctcaaccttaagaaattccaatccaccaccaatattttcatcaccagc-----------------cagtaaga |
40515632 |
T |
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| Q |
131 |
taaggacgctgannnnnnnnnnnnnnngtgattgctagatgcaataactatttcatgccccatccaacaaccctcaacaaaattggcaattgtacataaa |
230 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
40515631 |
taaggacgctgattttttttcctttttgtgattgctagatgcaataactatttcatgccccatccaacaaccctcaacaaaattggcaattatacataaa |
40515532 |
T |
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| Q |
231 |
aatagttattgatagacatgtcctagagttaacagtcactgccagacatgtctcaca |
287 |
Q |
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| T |
40515531 |
aatagttattgatagacatgtcctagagttaacagtcactgccagacatgtctcaca |
40515475 |
T |
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