View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14084_high_18 (Length: 265)
Name: NF14084_high_18
Description: NF14084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14084_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 12 - 243
Target Start/End: Complemental strand, 33265201 - 33264972
Alignment:
| Q |
12 |
tgagatgaaaatgtttgaatgtttgatagattattaaagaactaaaataaagatatcctcaattttgcttttgaccatatgaagcagaagaataattagg |
111 |
Q |
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| T |
33265201 |
tgagatgaaaatgtttgaatgtttgatagattattaaagaactaaaataaagatatcctcaattttgcttttgaccatatgaagcagaagaataattagg |
33265102 |
T |
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| Q |
112 |
aaaataataaaataaagaaaactaannnnnnnnnaaaggaaaagaaaactaactatatagcctttaaatgaacggtcagtaaattgtttgggagtccgaa |
211 |
Q |
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||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33265101 |
aaaataataaaataaagaaaacttatttttttt--aaggaaaagaaaactaactatatagcctttaaatgaacggtcagtaaattgtttgggagtccgaa |
33265004 |
T |
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| Q |
212 |
ggagcgtaagaaacaaccacaaactgttgcta |
243 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
33265003 |
ggagcgtaagaaacaaccacaaactgttgcta |
33264972 |
T |
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