View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14085_low_6 (Length: 265)
Name: NF14085_low_6
Description: NF14085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14085_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 33512638 - 33512868
Alignment:
| Q |
14 |
agagaagaagataataatcaacatggttcatcaaggtttagtattggaagcagctttaggaaaattggaaaagctactactatatttaaggaagaagaaa |
113 |
Q |
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| T |
33512638 |
agagaagaagataataatcaacatggttcatcaaggtttagtattggaagcagctttaggaaaattggaaaagctactactatatttaaggaagaagaaa |
33512737 |
T |
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| Q |
114 |
aaggtattatttcaaaggaagaagaattgcttatagaaaaaagtgattctaacaataaagcttatcataagcataatcacaagattactatatctgatgt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33512738 |
aaggtattatttcaaaggaagaagaattgcttatagaaaaaagtgattctaacaataaagcttatcataagcataatcacaagattactatatctgatgt |
33512837 |
T |
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| Q |
214 |
tgtgtttaagcatagatggagcaatgttagt |
244 |
Q |
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| T |
33512838 |
tgtgtttaagcatagatggagcaatgttagt |
33512868 |
T |
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