View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14088_low_7 (Length: 298)
Name: NF14088_low_7
Description: NF14088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14088_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 10 - 282
Target Start/End: Original strand, 37975674 - 37975946
Alignment:
| Q |
10 |
aatatctgtggtcatttcacatgatttgtttgctcatttatatatattaatctctctctgccatctcttattgtatattgtgccacctcacaaatctagc |
109 |
Q |
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| T |
37975674 |
aatatctgtggtcatttcacatgatttgtttgctcatttatatatattaatctctctctgccatctcttattgtatattgtgccacctcacaaatctagc |
37975773 |
T |
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| Q |
110 |
tacttaaacaaatcaggcataaggttcatataatagttagtggacacagaagaactatataactataatggaaatctcccaaacctttcttcctttttct |
209 |
Q |
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|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
37975774 |
tacttaaacaaatcagacataagtttcatataatagttagtggacacagaagaactatataactacaatggaaatctcccaaacctttcttcctttttct |
37975873 |
T |
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| Q |
210 |
ttagagaaatctgaaaaatgaaacaccttttaaatacaagggacaggtataaccttcttttttattttatatc |
282 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37975874 |
ttagagaaatctgaaaaatgaaataccttttaaatacaagggacaggtataaccttcttttttattttatatc |
37975946 |
T |
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