View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14089_high_13 (Length: 305)
Name: NF14089_high_13
Description: NF14089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14089_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 8 - 210
Target Start/End: Original strand, 48250706 - 48250909
Alignment:
| Q |
8 |
aagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatcttaattcttaacataggaaaa-aaggataacagtgaagaaaagtgagag |
106 |
Q |
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| T |
48250706 |
aagcaaagggtggtttctctattttcctcaaacaaacaaaaacattgaatcttaattcttaacataggaaaaaaaggataacagtgaagaaaagtgagag |
48250805 |
T |
|
| Q |
107 |
acaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattgacaaccaccaacgttactcgctgctctgctttgccttatcttcctc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48250806 |
acaatggcggttgcagcaagtgcaggcacagtgttagttcctcatcggctattgacaaccaccaacgttactcgctgctctgctttgccttatcttcctc |
48250905 |
T |
|
| Q |
207 |
ctcg |
210 |
Q |
| |
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|||| |
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| T |
48250906 |
ctcg |
48250909 |
T |
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