View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_high_213 (Length: 202)
Name: NF1408_high_213
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_high_213 |
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Alignment Details
Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 200
Target Start/End: Original strand, 39793435 - 39793553
Alignment:
| Q |
82 |
ccctgcaacaggtttgtttctactttccacaaaaaggggactgagcacaacaaaagatcccatcatacgaagtggtaggttgccnnnnnnnccctacttt |
181 |
Q |
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| T |
39793435 |
ccctgcaacaggtttgtttctactttccacaaaaatgggactgagcacaactaaagataccatcatacgaagtggtaggttgccaagaaaaacctacaat |
39793534 |
T |
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| Q |
182 |
taccgccgctaagtataat |
200 |
Q |
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||||||||||||||||||| |
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| T |
39793535 |
taccgccgctaagtataat |
39793553 |
T |
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