View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_high_74 (Length: 330)
Name: NF1408_high_74
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_high_74 |
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Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 28470749 - 28470973
Alignment:
| Q |
7 |
tccaacaatataattaactaagagaaaataaaaacaaacatcaaaccagcataaaaagaattaatggaggtaagaaaaagttttttacaattactcactc |
106 |
Q |
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| T |
28470749 |
tccaacaaaataattaactaaga--aaataaaaacaaacatcaaaccagcataaaaagaattaatgaaggtaagaaaaagttttttacaattattcactc |
28470846 |
T |
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| Q |
107 |
aaattacaaaccatgaagatgttcatgcttgcatagtcatgacaatagcattaaaatcctattttccaaaatagaaaacaaaacaaaatccattctacta |
206 |
Q |
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| T |
28470847 |
aaattacaaaccatgaagatgttcatgcttgcatagtcatgacaatagcattaaaatcctattttccaaaatagaaaacaaaacaaaatccattctacta |
28470946 |
T |
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| Q |
207 |
gatatttgttctgtaaacaatgcttca |
233 |
Q |
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||||||||||||||||||||||||||| |
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| T |
28470947 |
gatatttgttctgtaaacaatgcttca |
28470973 |
T |
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