View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_high_98 (Length: 287)
Name: NF1408_high_98
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_high_98 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 30 - 276
Target Start/End: Original strand, 4516473 - 4516719
Alignment:
| Q |
30 |
caacaattgttcaatttcaataggaacaatattcattgggaaggttcaacttcaagtcaaaattctacttggaaatcaaaccctaaagaagtatcaaggg |
129 |
Q |
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| T |
4516473 |
caacaattgttcaatttcaataggaacaatattcattgggaaggttcaacttcaagtcaaaattctacttggaaatcaaaccctaaagaagtatcaaggg |
4516572 |
T |
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| Q |
130 |
aattggttaatgataaaccaaattacttgataaatagtactcaagaagaggaaaatattaacaagcaaggaagcaatattgaagttcctactgcaactgt |
229 |
Q |
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| T |
4516573 |
aattggttaatgataaaccaaattacttgatgaatagtactcaagaagaggaaaatattaacaagcaaggaagcaatattgaagttcctactgcaactgt |
4516672 |
T |
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| Q |
230 |
ttttccaaataatagcaatatgttacaaagaccaaatcacccttcat |
276 |
Q |
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| T |
4516673 |
ttttccaaataataacaatatgttacaaagaccaaatcacccttcat |
4516719 |
T |
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