View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_133 (Length: 291)
Name: NF1408_low_133
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_133 |
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Alignment Details
Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 46 - 222
Target Start/End: Complemental strand, 6396195 - 6396023
Alignment:
| Q |
46 |
agagagaagaacttcaggaaattaggtacaagaaggtatagtagttgtatcaagttgtttattattggaatcttccaatatgttgtatataagtttgtct |
145 |
Q |
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| T |
6396195 |
agagataagaactttaggaaattaggtacaagaaggtatagtagttgtatcaagttgtttattattggaatcttccaatatgttgtatat----ttgtct |
6396100 |
T |
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| Q |
146 |
ttgtaattttgttgataggttgagtctgactcctcatcactatttgaagtgtgcatgtcaccacaatgaattgaagt |
222 |
Q |
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| T |
6396099 |
ttgtaattttgttgataggttgagtctgactcctcatcactatttgaagtgtgcatgtcaccacaatgaattgaagt |
6396023 |
T |
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