View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_148 (Length: 277)
Name: NF1408_low_148
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_148 |
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Alignment Details
Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 46229395 - 46229536
Alignment:
| Q |
1 |
tctcctctacatctttctcctt-actttcacctaatagttgaagtttttgggatacaattgattcctatatatgaaacatgaaatctgagctagccttca |
99 |
Q |
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| T |
46229395 |
tctcctctacatctttctcctttactttcacctaatagttgaagtttttgggatacaattgattcctatatatgtaacatgaaatctgagctagccttca |
46229494 |
T |
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| Q |
100 |
agccacatatttatgcaacttggttttcattgtggcctatga |
141 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
46229495 |
agccacatatttatgcaacttggttttcattgtggcctatga |
46229536 |
T |
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