View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_190 (Length: 250)
Name: NF1408_low_190
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_190 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 27066258 - 27066482
Alignment:
| Q |
26 |
atcatcaccagaaccagctccatctctgtaattggtgaatttctcttgagcagcaaaacttcctttaccatagttcttgaaagtattctcaggtttgttc |
125 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27066258 |
atcatcaccagaaccagctccatctctgtaattggtgaatttctcttgagcagcaaaacttcctttaccatagttcttgaaagtattctcaggtttgttc |
27066357 |
T |
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| Q |
126 |
aaattcttgctatagcttacgaaagcatctacagcgcttgagcctttttctgaatatccagagaaatcagatttgaagacgttagcatttttcgcatact |
225 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27066358 |
aaattcttactatagcttacgaaagcatctacagcgcttgagcctttttctgaatatccagagaaatcagatttgaagacgttagcatttttcgcatact |
27066457 |
T |
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| Q |
226 |
gagtgaaaccgttaactgcgtgaat |
250 |
Q |
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||||||||||||||||||||||||| |
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| T |
27066458 |
gagtgaaaccgttaactgcgtgaat |
27066482 |
T |
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