View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_217 (Length: 228)
Name: NF1408_low_217
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_217 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 499417 - 499633
Alignment:
| Q |
1 |
tacttcacgtcaaagaaattggacattatgaaattcttttgctgtattttaattaagatgataatcgctaaacaatgaagaaaaagccaacacatgaagc |
100 |
Q |
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| T |
499417 |
tacttcacctcaaagaaattggacattatgaaattcttttgctgtattttaattaagatgataatcgctacacaatgaagaaaaagccaacacatgaagc |
499516 |
T |
|
| Q |
101 |
caaacgtctcatccgttttggactaacctcatttccaataatttgttgattataacgtccaaggatcaaggttcttgtcatgctgtttactactttttaa |
200 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
499517 |
caaacgtctcacccgttttggactaacctcatttccaataatttgttgattataatgtccaaggatcaaggttcttgtcatgctgtttactactttttaa |
499616 |
T |
|
| Q |
201 |
attatattccgtttcat |
217 |
Q |
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||||||||||||||||| |
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| T |
499617 |
attatattccgtttcat |
499633 |
T |
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