View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_255 (Length: 215)
Name: NF1408_low_255
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_255 |
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Alignment Details
Target: chr2 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 3899160 - 3899026
Alignment:
| Q |
1 |
acaaacatatatgtattatgaaagttgagaaacataaattcacagcattataatataataccgattgattaatgccttaattcatcattttttacattaa |
100 |
Q |
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| T |
3899160 |
acaaacatatctgtattatgaaagttgagaaacataaattcacagcattataatataataccgattgattaatgccttaattcattattttttacatt-a |
3899062 |
T |
|
| Q |
101 |
atatcccttactccttcccagccacgatattcttgg |
136 |
Q |
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||||||||||||||||||||||||||| |||||||| |
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| T |
3899061 |
atatcccttactccttcccagccacgacattcttgg |
3899026 |
T |
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