View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1408_low_59 (Length: 395)
Name: NF1408_low_59
Description: NF1408
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1408_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 30 - 387
Target Start/End: Complemental strand, 40255212 - 40254855
Alignment:
| Q |
30 |
ggaacaacactttccttatcataaatattgttagataaataattctccttgttgatgctatgaagtgaaaggctagaggaagcaacatcatcaatatttg |
129 |
Q |
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| T |
40255212 |
ggaacaacactttccttatcataaatattgttagataaataattctccttgttgatgctatgaagtgaaaggctagaggaagcaacatcatcaatatttg |
40255113 |
T |
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| Q |
130 |
catttactattccaaatttgttttgatgaannnnnnnnnnnnnnaaggccatgttgcatgattcaactattcttgtgttagatgaattcattgaggaaat |
229 |
Q |
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| T |
40255112 |
catttactattccaaatttgttttgatgaattttttgcttttttaaggccatgttgcatgattcaactattcttgtgttagatgaattcattgaggaaat |
40255013 |
T |
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| Q |
230 |
tttcttctcattatttgattggaggctagacaaagataaatcacatgaaagttgttgctttggatgatcaagttgtggaatagtactatatgtcttagct |
329 |
Q |
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| T |
40255012 |
tttcttctcattatttgattggaggctagacaaagataaatcacatgaaagttgttgctttggatgatcaagttgtggaatagtactatatgtcttagct |
40254913 |
T |
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| Q |
330 |
tgtgtagatggctgaaaatttcttattaacaattgaagttgatctcttgcttcatctc |
387 |
Q |
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| T |
40254912 |
tgtgtagatggctgaaaatttcttattaacaattgaagttgatctcttgcttcatctc |
40254855 |
T |
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