View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14092_high_5 (Length: 393)
Name: NF14092_high_5
Description: NF14092
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14092_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 5 - 374
Target Start/End: Original strand, 32652693 - 32653062
Alignment:
| Q |
5 |
gagcagcacagaggattcattactgcgacagatcgaaaaagactgcactgcagtctctaatgccatgttgtcctttccggtcatgattccaggcaccaga |
104 |
Q |
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| T |
32652693 |
gagcatcacagaggattcattactgcgacagatcgaaaaagactgcactgcagtctctaatgccatgttgtcctttccggtcatgattccaggcaccaga |
32652792 |
T |
|
| Q |
105 |
tactataaaggcatcacggttagtgatatttgcataaatgtgatttattagttcttcaatgagaaaggcctactagtaccagacttaaatttaagtgatt |
204 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32652793 |
tactataaaggcatcacggttagtgatatttacataaatgtgatttattagttcttcaatgagaaaggcctactagtaccagacttaaatttaagtgatt |
32652892 |
T |
|
| Q |
205 |
gactcggttacacgcttcctatgaagtactgattaatttaagggaaaaatcagacatagtttttcttcttttcttcgctgaactttcataaggttgaact |
304 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32652893 |
gactcggttatacgcttcctatgaagtactgattaatttaaggaaaaaatcagacatagtttttcttcttttcttcgctgaactttcataaggttgaact |
32652992 |
T |
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| Q |
305 |
aaagaagatacatgaagcaggctcgtaacaggctcatggaaaccttcagagagatcattgccagacgtag |
374 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32652993 |
aaagaagatacatgaagcaggctcgtaacaggctcatggaaaccttcagagagatcattgccagacgtag |
32653062 |
T |
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