View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14094_low_4 (Length: 405)
Name: NF14094_low_4
Description: NF14094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14094_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 13 - 385
Target Start/End: Original strand, 14094697 - 14095055
Alignment:
| Q |
13 |
aatattgcagagtgagggttgcgaacgagcttggagctggaaatggaaaaggagcaaaatttgctactatagtttctgtggtgacatcatcaataattgg |
112 |
Q |
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| T |
14094697 |
aatattgcagagtgagggttgcgaacgagcttggagctggaaatggaaaaggagcaaaatttgctactatagtttctgtggtgacatcatcaataattgg |
14094796 |
T |
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| Q |
113 |
acttttcttttggatgttgattatgatatttcacgataaatttggctacatattctctactagtaaacctgttcttgatgaagttagcaagctttctctt |
212 |
Q |
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| T |
14094797 |
acttttcttttggatgttgattatgatatttcatgataaatttggctacatattctctactagtaaacctgttcttgatgaagttagcaagctttctctt |
14094896 |
T |
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| Q |
213 |
ctattagcattcacaattcttctcaacagtgtccaaccagttctatcaggtatcaccttaacaattaacatttcaatttcaaatatttaatctcaaatat |
312 |
Q |
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| T |
14094897 |
ctattagcattcacaattcttctcaacagtgtccaaccagttctatcaggtatcaccttaacaattaacatttc--------------aatctcaaatat |
14094982 |
T |
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| Q |
313 |
atgaatgattttaaaaatagttatgaaacgttttaatgttctgacgattatgattgatttacgatgtaaaaac |
385 |
Q |
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||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
14094983 |
atgcatgattttaaaaatagttttgaaacgttttaatgttctgacgattatgattgattgacgatgtaaaaac |
14095055 |
T |
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