View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14095_high_8 (Length: 324)
Name: NF14095_high_8
Description: NF14095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14095_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 310
Target Start/End: Original strand, 30278101 - 30278410
Alignment:
| Q |
1 |
aaattgacatgttttggtgcatattaaattctcttataccttctttcactagaaagttctctcattgtttttaatgagattggtaaccgcaagtgagaat |
100 |
Q |
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| T |
30278101 |
aaattgacatgttttggtgcatattaaattctcttataccttctttcactagaaagttctctcattgtttttaatgagattggtaaccgtaagtgagaat |
30278200 |
T |
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| Q |
101 |
ataatgcaacacactttttaacacattctctttaacggatataaatctaaatggatttcactaaactatgcaaatcccacgtaaatgtaagttagtgaga |
200 |
Q |
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| T |
30278201 |
ataatgcaacacactttttaacacattctctttaatagatataaatttaaatggatttcactaaactatgcaaatctcacgtaaatgtaagttagtgaga |
30278300 |
T |
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| Q |
201 |
tccacataaaatcaagccaattagaaagagtatgtcgggaagaatacattagagagtgtgttgttagcataatgttttagaacacaatataaaagtttag |
300 |
Q |
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| T |
30278301 |
tccacataaaatcaagccaattagaaagagtatgtcgggaagaatacattagagagtgtgctgttagcataatgttttagaacacaatataaaagtttag |
30278400 |
T |
|
| Q |
301 |
gatgtttttg |
310 |
Q |
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|||||||||| |
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| T |
30278401 |
gatgtttttg |
30278410 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30278017 - 30278094
Alignment:
| Q |
1 |
aaattgacatgttttggtgcatattaaattctc---ttataccttctttcactagaaagttctctcattgtttttaat |
75 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |
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| T |
30278017 |
aaattgacatgttttggtgcatattaaattctcttattataccttctttcactagaaagctctttcattgtttttaat |
30278094 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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