View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14095_low_6 (Length: 434)

Name: NF14095_low_6
Description: NF14095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14095_low_6
NF14095_low_6
[»] chr7 (1 HSPs)
chr7 (340-420)||(10210039-10210119)


Alignment Details
Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 10210039 - 10210119
Alignment:
340 atgttggtaaaggagcacgtgctgctcgattacagagaaataaaatggtattgttatatctttatatgttccttgtctgtg 420  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
10210039 atgttggtaaaggtgcacgtgctgctcgattacagagaaataaaatggtactgttatatctttatatgttccttgtttgtg 10210119  T

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