View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14096_high_12 (Length: 353)
Name: NF14096_high_12
Description: NF14096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14096_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 39076519 - 39076846
Alignment:
| Q |
20 |
aatggttagtgatgagaattagaagaagaggatggcctttcggaaccaactccatggctctcatcctcaccttgaattctagcaggaatacagaaacctg |
119 |
Q |
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| T |
39076519 |
aatggttagtgatgagaattagaagaagaggatggcctttcggaaccaactccatggctctcatcctcaccttgaattctagcaggaatacagaaacctg |
39076618 |
T |
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| Q |
120 |
tcaaagcatcagacagaaacctgctaccgaagatagaagcttggtgaatttgttgttgagacttgtgactatgatgatccaccgaggcatccgcaattgg |
219 |
Q |
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| T |
39076619 |
tcaaagcatcagacagaaacctgctaccgaagatagaagcttggtgaatttgttgttgagacttgtgattatgatgatccaccgaggcatccgcaattgg |
39076718 |
T |
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| Q |
220 |
aatatcattccaaggacgaagtgatggcgaaaaactggactgaagggtccccctatgggcggaaaaagtcgaaccttggccaagaaacgcaggcgaatta |
319 |
Q |
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| T |
39076719 |
aatatcattccaaggacgaagtgatggcgaaaaactggactgaagggtccccctatgggcggaaaaagtcgaaccttggccaagaaacgcaggcgaatta |
39076818 |
T |
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| Q |
320 |
accataaacccggttctattcatctcag |
347 |
Q |
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| T |
39076819 |
accataaacccggttctattcatatcag |
39076846 |
T |
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