View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14097_high_21 (Length: 379)
Name: NF14097_high_21
Description: NF14097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14097_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 31 - 363
Target Start/End: Complemental strand, 30418228 - 30417896
Alignment:
| Q |
31 |
tctcaagcaatgcgaaacttttttgtactgtcaaactgcatggcttaggcaccacttttctatagtactgtccttgtatgagctcttaggttttgttctt |
130 |
Q |
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| T |
30418228 |
tctcaagcaatgtgaaacttttttgtactgtcaaactgcatggcttaggcaccacttttctatagtactgtccttgtatgagctcttaggttttgttctt |
30418129 |
T |
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| Q |
131 |
agttaaaacggcaccctaatgagctgagaaaagtgaatgttttattaactaattttagcctctgagactgtttttggtgaaccaaaatacaagatatttg |
230 |
Q |
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| T |
30418128 |
agttaaaacggcaccctaatgagctgagaaaagtgaatgttttattaactaattttagcctctgagactttttttggtgaaccaaaatacaagatatttg |
30418029 |
T |
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| Q |
231 |
atgaaatgtctgacaagcttgcagtttggaactccatcgctgaagtttgctgtgatgaaaatgcacgcaagatgtgacgaatggagttcttgataaggat |
330 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
30418028 |
atgaaatgcctgacaagcttgcagtttggaactccatcgctgaagtttgctgtgatgaaaattcacgcaagatgtgacgaatggagttcttgataaggat |
30417929 |
T |
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| Q |
331 |
tcactttgttgggcatgattataattaatgagt |
363 |
Q |
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||||||||||||||||||||||| ||||||||| |
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| T |
30417928 |
tcactttgttgggcatgattatagttaatgagt |
30417896 |
T |
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