View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14097_high_28 (Length: 268)
Name: NF14097_high_28
Description: NF14097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14097_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 41282907 - 41282655
Alignment:
| Q |
1 |
gatcttccgtcggatactgtaagagagctagtgactttgttttacaggatcatttctaaaaatttgaaaataaaaattgatcaaggtcatattctttttg |
100 |
Q |
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| T |
41282907 |
gatcttccgtcggatactgtaagagagctagtaactttgttttacaggatcatatctaaaaatttgaaaataaaaattgatcaaggtcatattcattttg |
41282808 |
T |
|
| Q |
101 |
ctttgcagtttaataaggatagtggaaggttgacagaagagttgaaactaagagttgtatatgtctctcctacctcacctcaaggaagcacaagagatga |
200 |
Q |
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| T |
41282807 |
ctttgcagtttaataaggatagtggaaggttaacagaagagttgaaactaagagttgtatatgtctctcctacctcacctcaaggaagcacaagagatga |
41282708 |
T |
|
| Q |
201 |
tacagtgacaaactccacacaaaatcttgatacttcttcggtgagtttctctg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41282707 |
tacagtgacaaactccacacaaaatcttgatacttcttcggtgagtttctctg |
41282655 |
T |
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