View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14097_high_29 (Length: 254)

Name: NF14097_high_29
Description: NF14097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14097_high_29
NF14097_high_29
[»] chr6 (50 HSPs)
chr6 (10-233)||(27214295-27214518)
chr6 (10-233)||(27234710-27234933)
chr6 (17-230)||(26811390-26811603)
chr6 (14-233)||(26848538-26848757)
chr6 (10-230)||(25071540-25071760)
chr6 (10-230)||(26949542-26949762)
chr6 (10-230)||(26974933-26975153)
chr6 (10-216)||(27665203-27665409)
chr6 (15-230)||(26635571-26635786)
chr6 (15-230)||(26741537-26741752)
chr6 (14-230)||(26959046-26959263)
chr6 (79-177)||(26617260-26617358)
chr6 (79-177)||(26723188-26723286)
chr6 (86-216)||(27229127-27229257)
chr6 (74-216)||(27698644-27698786)
chr6 (74-216)||(27724995-27725137)
chr6 (74-216)||(28781034-28781176)
chr6 (74-216)||(28786173-28786315)
chr6 (74-216)||(28792294-28792436)
chr6 (74-216)||(27611152-27611294)
chr6 (74-216)||(27718529-27718671)
chr6 (86-192)||(27531359-27531465)
chr6 (86-216)||(27604867-27604997)
chr6 (86-180)||(29825958-29826052)
chr6 (86-209)||(31284190-31284313)
chr6 (86-216)||(26802337-26802467)
chr6 (52-181)||(27593148-27593277)
chr6 (86-228)||(28234447-28234589)
chr6 (52-181)||(27678876-27679005)
chr6 (90-181)||(26622906-26622997)
chr6 (90-181)||(26728884-26728975)
chr6 (86-181)||(27338227-27338322)
chr6 (86-181)||(27398967-27399062)
chr6 (86-228)||(26936977-26937119)
chr6 (86-228)||(28325364-28325506)
chr6 (52-181)||(26655919-26656048)
chr6 (52-181)||(26761890-26762019)
chr6 (52-181)||(27677742-27677871)
chr6 (92-157)||(28181068-28181133)
chr6 (92-157)||(28185320-28185385)
chr6 (59-107)||(24715586-24715634)
chr6 (86-174)||(25481679-25481767)
chr6 (86-174)||(25579656-25579744)
chr6 (57-180)||(29697460-29697583)
chr6 (122-228)||(28098567-28098673)
chr6 (52-137)||(26342062-26342147)
chr6 (119-180)||(26861547-26861608)
chr6 (119-180)||(26884094-26884155)
chr6 (92-181)||(28139471-28139560)
chr6 (86-174)||(26142802-26142890)
[»] chr2 (1 HSPs)
chr2 (10-229)||(17993770-17993989)
[»] scaffold1254 (1 HSPs)
scaffold1254 (74-216)||(67-209)
[»] scaffold0419 (1 HSPs)
scaffold0419 (74-216)||(7420-7562)
[»] scaffold0349 (2 HSPs)
scaffold0349 (74-216)||(3572-3714)
scaffold0349 (74-216)||(14505-14647)
[»] scaffold0277 (2 HSPs)
scaffold0277 (74-216)||(13782-13924)
scaffold0277 (86-192)||(4833-4939)
[»] chr5 (1 HSPs)
chr5 (49-171)||(16688951-16689073)
[»] scaffold0019 (1 HSPs)
scaffold0019 (86-168)||(58444-58526)
[»] scaffold0038 (2 HSPs)
scaffold0038 (86-228)||(34608-34750)
scaffold0038 (86-228)||(116679-116821)
[»] chr4 (4 HSPs)
chr4 (118-204)||(18699581-18699667)
chr4 (118-167)||(18655658-18655707)
chr4 (118-181)||(18724266-18724329)
chr4 (118-167)||(18731685-18731734)
[»] scaffold0012 (1 HSPs)
scaffold0012 (57-159)||(241814-241916)
[»] chr1 (1 HSPs)
chr1 (119-167)||(268539-268587)


Alignment Details
Target: chr6 (Bit Score: 168; Significance: 4e-90; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Complemental strand, 27214518 - 27214295
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||  | ||| ||||||||| ||||||||||||||||||||||    
T  27214518 aaatgaagaagtagcatagttctctgagaatacaataacagaaatcctcgagtcttcaattttcttgtggagcgaagatgtgatttcgtcacctctctga 27214419  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27214418 agctccttgtcatcaatgaaggttcggattcctttgtcacaaagagctttatagagattaccggtgaaaccgtgtcgagtgtcggtacccctgaaactaa 27214319  T
Q  210 tgaacacgtcatagctgaaattat 233  Q
    ||||||||||||||||||||||||    
T  27214318 tgaacacgtcatagctgaaattat 27214295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 10 - 233
Target Start/End: Original strand, 27234710 - 27234933
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||  | ||| ||||||||| ||||||||||||||||||||||    
T  27234710 aaatgaagaagtagcatagttctctgagaatacaataacagaaatcctcgagtcttcaattttcttgtggagcgaagatgtgatttcgtcacctctctga 27234809  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    ||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27234810 agctccttgtcatcaatgaaggttcggattcctttgtcacaaagagctttatagagattaccggtgaaaccgtgtcgagtgtcggtacccctgaaactaa 27234909  T
Q  210 tgaacacgtcatagctgaaattat 233  Q
    ||||||||||||||||||||||||    
T  27234910 tgaacacgtcatagctgaaattat 27234933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 26811603 - 26811390
Alignment:
Q  17 gaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctcct 116  Q
    ||||| ||||||||||  |||||||||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26811603 gaagttgcatagttctcagagaatacaataatggcaatcctagagtgttcaatgctcttgaggagcgaaggtgtgatttcgtcacctctctgaagctcct 26811504  T
Q  117 tgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    |||||||||||||||||||||||||  ||||| |||||||||| ||||||| ||||||||| ||   |||||||||| ||||||||||||||||||||||    
T  26811503 tgtcatcaatgaaggttcggattcctttgtcacaaagagctttatagagatgaccggtgaagccagatcgagtgtcgatacccctgaaactaatgaacac 26811404  T
Q  217 gtcatagctgaaat 230  Q
    ||||||| ||||||    
T  26811403 gtcatagatgaaat 26811390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 233
Target Start/End: Complemental strand, 26848757 - 26848538
Alignment:
Q  14 gaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagct 113  Q
    |||||||| ||||||||||  |||||||||| ||  | |||||| |||||||||||| | |||||||||||||||||||| || ||||| |||||||| |    
T  26848757 gaagaagtggcatagttctcagagaatacaagaatggaaatcctcgagtcttcaatgttcttgaggagcgaaggtgtgatctcatcaccactctgaagat 26848658  T
Q  114 ccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatgaa 213  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||| |  || ||||||||| |||||||||||||||||    
T  26848657 ccttgtcatcaatgaaggttcggattccattgtcagaaagagctttatagagattaccagtgaaactgaatctagtgtcggtgcccctgaaactaatgaa 26848558  T
Q  214 cacgtcatagctgaaattat 233  Q
    ||| |||||| |||||||||    
T  26848557 cacatcatagttgaaattat 26848538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 25071760 - 25071540
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||| ||||||||  || ||||| || ||||  ||||| || || ||||||||||| ||| |||||||||||||||||||||||||||||| |    
T  25071760 aaatgaagaagaagcatagtctttagagaagacgataatggcaattctcgaatcttcaatgctcttgcggagcgaaggtgtgatttcgtcacctctctta 25071661  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    ||||| ||||||||||| |||||  |||||||  |||||||||||||||| || ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  25071660 agctctttgtcatcaataaaggtgtggattcctttgtcagaaagagctttataaagattaccggtaaaaccgaatcgagtgtcggtacccctgaaactaa 25071561  T
Q  210 tgaacacgtcatagctgaaat 230  Q
    |||||||||||||| ||||||    
T  25071560 tgaacacgtcatagatgaaat 25071540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 26949762 - 26949542
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||| |||||| | ||| || || || ||||  ||||| || || |||||||| || |||||||| ||||||||||||||||||||| |||||    
T  26949762 aaatgaagaagaagcatattccttagaaaagacgataatggcaattctcgattcttcaattctcttgaggagtgaaggtgtgatttcgtcacctttctga 26949663  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  26949662 agctccttatcatcaatgaaggttcggattcccttgtcagagagagctttatagagattaccggtgaaaccgaatcgagtgtcggtacctctgaaactaa 26949563  T
Q  210 tgaacacgtcatagctgaaat 230  Q
    ||||||| ||| || ||||||    
T  26949562 tgaacacatcaaagttgaaat 26949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 26975153 - 26974933
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||| ||||||||  || ||||| || ||||  | |||||| |||||||||||||| |||||||||||||||||||||||||| ||| | | |    
T  26975153 aaatgaagaagaagcatagtctttagagaagacgataatggtaatcctcgagtcttcaatgctcttgaggagcgaaggtgtgatttcgtcccctttttta 26975054  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    ||||||||||||||||||||| |   ||||||  |||||||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||||||||||    
T  26975053 agctccttgtcatcaatgaagatgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaatcgagtgtcggtacctctgaaactaa 26974954  T
Q  210 tgaacacgtcatagctgaaat 230  Q
    |||||||||||||| ||||||    
T  26974953 tgaacacgtcataggtgaaat 26974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 216
Target Start/End: Original strand, 27665203 - 27665409
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    |||||||||||||||||||||||| ||||||| |||||  |||||||| || ||||||||||| ||  |||| ||||||||||||||||||||  |  ||    
T  27665203 aaatgaagaagtagcatagttcttagagaatataataatggcaatcctcgattcttcaatgctcttccggagtgaaggtgtgatttcgtcaccagttgga 27665302  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    |||||||||||||||||||||||  |||||||  ||||||||||||| || ||||| ||||||||||||||   ||||||||||||||||||||||||||    
T  27665303 agctccttgtcatcaatgaaggtgtggattcctttgtcagaaagagccttatagaggttaccggtgaaaccaaatcgagtgtcggtacccctgaaactaa 27665402  T
Q  210 tgaacac 216  Q
    |||||||    
T  27665403 tgaacac 27665409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 26635786 - 26635571
Alignment:
Q  15 aagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctc 114  Q
    |||||| |||||| | ||| ||||| || ||||  |||||||| || ||||||||||| ||||||||||||||||||||||| || ||| | | ||||||    
T  26635786 aagaagaagcatattccttagagaaaacgataatggcaatcctcgactcttcaatgctcttgaggagcgaaggtgtgatttcatccccttttttaagctc 26635687  T
Q  115 cttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatgaac 214  Q
    ||||||||||||||||||   ||||||  |||||||||||||||| ||||| |||||||||||||||  | |||||||||| ||||||||||||||||||    
T  26635686 cttgtcatcaatgaaggtgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaattgagtgtcggtgcccctgaaactaatgaac 26635587  T
Q  215 acgtcatagctgaaat 230  Q
    ||||| ||| ||||||    
T  26635586 acgtcgtaggtgaaat 26635571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 230
Target Start/End: Complemental strand, 26741752 - 26741537
Alignment:
Q  15 aagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctc 114  Q
    |||||| |||||| | ||| ||||| || ||||  |||||||| || ||||||||||| ||||||||||||||||||||||| || ||| | | ||||||    
T  26741752 aagaagaagcatattccttagagaaaacgataatggcaatcctcgactcttcaatgctcttgaggagcgaaggtgtgatttcatccccttttttaagctc 26741653  T
Q  115 cttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatgaac 214  Q
    ||||||||||||||||||   ||||||  |||||||||||||||| ||||| |||||||||||||||  | |||||||||| ||||||||||||||||||    
T  26741652 cttgtcatcaatgaaggtgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaattgagtgtcggtgcccctgaaactaatgaac 26741553  T
Q  215 acgtcatagctgaaat 230  Q
    ||||| ||| ||||||    
T  26741552 acgtcgtaggtgaaat 26741537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 230
Target Start/End: Complemental strand, 26959263 - 26959046
Alignment:
Q  14 gaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgct-tttgaggagcgaaggtgtgatttcgtcacctctctgaagc 112  Q
    ||||||| |||||| | ||| ||||| || ||||  |||||||| |||||||||||||| |||||| ||||||||||||||||| || ||| | | ||||    
T  26959263 gaagaagaagcatattccttagagaaaacgataatggcaatcctcgagtcttcaatgctctttgagaagcgaaggtgtgatttcatccccttttttaagc 26959164  T
Q  113 tccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatga 212  Q
    || |||||||||||||||||   ||||||  |||||||||||||||| ||||| ||||||||||||| |  |||||||||||| ||||||||||||||||    
T  26959163 tctttgtcatcaatgaaggtgtcgattcctttgtcagaaagagctttatagaggttaccggtgaaactgaatcgagtgtcggtgcccctgaaactaatga 26959064  T
Q  213 acacgtcatagctgaaat 230  Q
    | ||||| ||| ||||||    
T  26959063 agacgtcgtaggtgaaat 26959046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 26617358 - 26617260
Alignment:
Q  79 gagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaa 177  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||||| |||||||| ||||||||    
T  26617358 gagcgaaggtgtgatttcatcacctctctgaagctccttgtcatcaatgaaggttcggactcctttgtcacaaagagctttatagagattgccggtgaa 26617260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 26723286 - 26723188
Alignment:
Q  79 gagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaa 177  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||||| |||||||| ||||||||    
T  26723286 gagcgaaggtgtgatttcatcacctctctgaagctccttgtcatcaatgaaggttcggactcctttgtcacaaagagctttatagagattgccggtgaa 26723188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 27229257 - 27229127
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    |||||||||||||| ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||| |||||| | |    
T  27229257 ggtgtgatttcgtctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtgcc 27229158  T
Q  186 gagtgtcggtacccctgaaactaatgaacac 216  Q
    ||||||| || ||||| ||||||| ||||||    
T  27229157 gagtgtcagtgcccctaaaactaaggaacac 27229127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 27698644 - 27698786
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  27698644 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 27698743  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| ||||||||    
T  27698744 taaaaccgtgccgagtgtcagtgcccctaaaactgatgaacac 27698786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 27724995 - 27725137
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  27724995 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 27725094  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||||| ||||||    
T  27725095 taaaaccgtgccgagtgtcagtgcccctaaaactaaggaacac 27725137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 28781176 - 28781034
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  28781176 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccgg 28781077  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| | ||||||    
T  28781076 taaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 28781034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 28786315 - 28786173
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  28786315 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccgg 28786216  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| | ||||||    
T  28786215 taaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 28786173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 28792436 - 28792294
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  28792436 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccgg 28792337  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| | ||||||    
T  28792336 taaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 28792294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 27611152 - 27611294
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || |||||  |||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  27611152 ttgaggagtgatggtgtgatttcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 27611251  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| | ||||||    
T  27611252 taaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 27611294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 27718529 - 27718671
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  27718529 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 27718628  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||| | | |||||||| || ||||| ||||| | ||||||    
T  27718629 taaaactgtgccgagtgtcagtgcccctaaaactgaggaacac 27718671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 27531359 - 27531465
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || ||||| ||||| || |||||||||||||||||   ||||||| |||||| |||||| ||||||||||| ||||| |||||| | |    
T  27531359 ggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggc 27531458  T
Q  186 gagtgtc 192  Q
    |||||||    
T  27531459 gagtgtc 27531465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 27604867 - 27604997
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || |||||  |||| || || ||||||||||||||  | |||||| |||||| |||||| ||||||||||| ||||| ||||||  ||    
T  27604867 ggtgtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtatc 27604966  T
Q  186 gagtgtcggtacccctgaaactaatgaacac 216  Q
    ||||||| || ||||| ||||||| ||||||    
T  27604967 gagtgtcagtgcccctaaaactaaggaacac 27604997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 180
Target Start/End: Complemental strand, 29826052 - 29825958
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaacc 180  Q
    |||||||||||||| ||||| |||||||| ||||||||||||||||| || |||  | ||||||  ||||||||||||||||| ||||| |||||    
T  29826052 ggtgtgatttcgtcccctctttgaagctctttgtcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagattgccggtaaaacc 29825958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 209
Target Start/End: Complemental strand, 31284313 - 31284190
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || ||||| ||||| ||  | ||||||||||||||  |||||||| |||||| |||||| ||||||||||| |||||||||||    |    
T  31284313 ggtgtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaaccatacc 31284214  T
Q  186 gagtgtcggtacccctgaaactaa 209  Q
    |||||||  | |||||||||||||    
T  31284213 gagtgtcacttcccctgaaactaa 31284190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 26802467 - 26802337
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||  |||||| ||||||||||| || || ||||||   |    
T  26802467 ggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaaccgtacc 26802368  T
Q  186 gagtgtcggtacccctgaaactaatgaacac 216  Q
    ||||||| || ||||| ||||| | ||||||    
T  26802367 gagtgtcagtgcccctaaaactgaggaacac 26802337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 27593148 - 27593277
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaa 151  Q
    |||||| || |||||||||   ||||| || || ||||||||||| |  ||||| |||||  | |||||||||||||||||   ||||||| |||||| |    
T  27593148 aatcctagactcttcaatggccttgagaagtgatggtgtgatttcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagta 27593247  T
Q  152 agagctttgtagagattaccggtgaaaccg 181  Q
    ||||| ||||||||||| ||||||||||||    
T  27593248 agagccttgtagagattgccggtgaaaccg 27593277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 28234589 - 28234447
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||| ||||| || ||||  ||||||||| ||||||||||||||||  |||||||| ||| | |||||||| | ||||||||  |||| |||||    |    
T  28234589 ggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagc 28234490  T
Q  186 gagtgtcggtacccctgaaactaatgaacacgtcatagctgaa 228  Q
    |||||||  |||| || ||||||| ||||||||||||| ||||    
T  28234489 gagtgtcactacctctaaaactaaggaacacgtcataggtgaa 28234447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 27679005 - 27678876
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaa 151  Q
    |||||| || |||||||||   ||||| || || ||||||||||| || ||||| |||||  | || | ||||||||||||   ||||||| |||||| |    
T  27679005 aatcctagactcttcaatggccttgagaagtgatggtgtgatttcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagta 27678906  T
Q  152 agagctttgtagagattaccggtgaaaccg 181  Q
    ||||| ||||||||||| ||||||||||||    
T  27678905 agagccttgtagagattcccggtgaaaccg 27678876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 26622997 - 26622906
Alignment:
Q  90 tgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||||||| ||||| ||||| ||    ||||||||||||||  |||||||| |||||| |||||| ||||||||||| || |||||||||    
T  26622997 tgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccg 26622906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 26728975 - 26728884
Alignment:
Q  90 tgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||||||| ||||| ||||| ||    ||||||||||||||  |||||||| |||||| |||||| ||||||||||| || |||||||||    
T  26728975 tgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccg 26728884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 27338227 - 27338322
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||| |||| || ||||| | ||| || ||||||||||||||||||  ||||||| |||||  |||||| ||||||||||| ||||| ||||||    
T  27338227 ggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccg 27338322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 181
Target Start/End: Original strand, 27398967 - 27399062
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||| |||| || ||||| | ||| || ||||||||||||||||||  ||||||| |||||  |||||| ||||||||||| ||||| ||||||    
T  27398967 ggtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccg 27399062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 26937119 - 26936977
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || ||||  || ||||||||||||||||||||||| || |||||    ||| ||||||||||||| |||| |||  | |||  |   |    
T  26937119 ggtgtgatttcttctcctccatggagctccttgtcatcaatgaaggtgcgaattccacaatcacaaagagctttgtaaagatgaccaataaaatggaagc 26937020  T
Q  186 gagtgtcggtacccctgaaactaatgaacacgtcatagctgaa 228  Q
    |||||||||| || |||||||| | ||||||||||||| ||||    
T  26937019 gagtgtcggtgcctctgaaactgaggaacacgtcataggtgaa 26936977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 28325506 - 28325364
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||| |||||||||||||  ||||| || ||||||||||||||||| || |||| | |   | ||||| ||||||||||||| || || |||||    |    
T  28325506 ggtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaaggtacgaattctcttcctacaaagatctttgtagagatttccagtaaaaccataac 28325407  T
Q  186 gagtgtcggtacccctgaaactaatgaacacgtcatagctgaa 228  Q
    |||||||  |||| || ||||||| ||||||||||||| ||||    
T  28325406 gagtgtcactacctctaaaactaaggaacacgtcataggtgaa 28325364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 26656048 - 26655919
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaa 151  Q
    ||||||||| |||||||||   || | ||| || ||||||||||| || |||||  |||| || |||||||||||||| ||  |||||||| | |||  |    
T  26656048 aatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaata 26655949  T
Q  152 agagctttgtagagattaccggtgaaaccg 181  Q
    ||||| ||||||||||| ||||| ||||||    
T  26655948 agagccttgtagagattgccggtaaaaccg 26655919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 181
Target Start/End: Complemental strand, 26762019 - 26761890
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaa 151  Q
    ||||||||| |||||||||   || | ||| || ||||||||||| || |||||  |||| || |||||||||||||| ||  |||||||| | |||  |    
T  26762019 aatcctggattcttcaatggccttaacgagtgatggtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaata 26761920  T
Q  152 agagctttgtagagattaccggtgaaaccg 181  Q
    ||||| ||||||||||| ||||| ||||||    
T  26761919 agagccttgtagagattgccggtaaaaccg 26761890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 181
Target Start/End: Original strand, 27677742 - 27677871
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaa 151  Q
    |||||| || |||||||||   ||||| || || ||||||||||| || ||||| ||||| || |  |  |||||||||||  |||||||| |||||  |    
T  27677742 aatcctagactcttcaatggccttgagaagtgatggtgtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatca 27677841  T
Q  152 agagctttgtagagattaccggtgaaaccg 181  Q
    ||||| ||||||||||| ||||||||||||    
T  27677842 agagccttgtagagattgccggtgaaaccg 27677871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 28181133 - 28181068
Alignment:
Q  92 atttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagct 157  Q
    ||||| |||||||  ||||||||  ||||||| |||||||||||||||||| ||||| ||||||||    
T  28181133 atttcttcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtcacaaagagct 28181068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 28185385 - 28185320
Alignment:
Q  92 atttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagct 157  Q
    ||||| |||||||  ||||||||  ||||||| |||||||||||||||||| ||||| ||||||||    
T  28185385 atttcttcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtcacaaagagct 28185320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 24715634 - 24715586
Alignment:
Q  59 gagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctct 107  Q
    |||||||| ||||| ||||||||||||| ||||||||| ||||||||||    
T  24715634 gagtcttcgatgctcttgaggagcgaagatgtgatttcatcacctctct 24715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 25481767 - 25481679
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggt 174  Q
    ||||||||||| || ||||| ||||| || || ||||||||||| || || |||||| |||||  |||||| || ||||||||||||||    
T  25481767 ggtgtgatttcatctcctctttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggt 25481679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 25579744 - 25579656
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggt 174  Q
    ||||||||||| || ||||| ||||| || || ||||||| |||||| || |||||| |||||  |||||| || ||||||||||||||    
T  25579744 ggtgtgatttcatctcctctttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggt 25579656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 29697460 - 29697583
Alignment:
Q  57 tggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagc 156  Q
    |||||||||||||   |||||| || || ||||||||||| || ||| | | |||||||||| |||| ||||| ||||| | |||  |||||  ||||||    
T  29697460 tggagtcttcaattgctttgagaagtgatggtgtgatttcttcgccttttttaagctccttggcatccatgaaagttcgaactcctttgtcatcaagagc 29697559  T
Q  157 tttgtagagattaccggtgaaacc 180  Q
    ||| | ||||| ||||||||||||    
T  29697560 tttcttgagataaccggtgaaacc 29697583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 28098567 - 28098673
Alignment:
Q  122 tcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacacgtcat 221  Q
    ||||||||||| |||| |||   |||| ||||||||||||||||||| || || |||||    ||||||||||| ||||| ||| |||  ||||||||||    
T  28098567 tcaatgaaggtgcggactcctccgtcacaaagagctttgtagagatttccagtaaaaccataccgagtgtcggtgcccctaaaattaagaaacacgtcat 28098666  T
Q  222 agctgaa 228  Q
    || ||||    
T  28098667 aggtgaa 28098673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 26342062 - 26342147
Alignment:
Q  52 aatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcgga 137  Q
    ||||||||| |||||||||  |||||  || ||  ||||||||| ||||||||  ||||||||| | |||||||||||||| ||||    
T  26342062 aatcctggactcttcaatggctttgacaagtgattgtgtgattttgtcacctccatgaagctccctatcatcaatgaaggtgcgga 26342147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 26861608 - 26861547
Alignment:
Q  119 tcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaacc 180  Q
    ||||| ||||||||  | |||||| |||||| |||||| ||||||||||||||||| |||||    
T  26861608 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaacc 26861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 26884155 - 26884094
Alignment:
Q  119 tcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaacc 180  Q
    ||||||||||||||  |||||||| ||| || |||||| ||||||||||| || ||||||||    
T  26884155 tcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 26884094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 28139560 - 28139471
Alignment:
Q  92 atttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||||||||||  ||||||||| | |||||||| || ||  |||||||   ||||  |||||||||||||||||| || |||||||||    
T  28139560 atttcgtcacctccttgaagctccctatcatcaataaaagtgtggattccacagtcacgaagagctttgtagagatttccagtgaaaccg 28139471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 26142890 - 26142802
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggt 174  Q
    ||||||||||| || ||||| | ||| || || ||||||||||| || || |||||| |||||  |||||| || ||||||||||||||    
T  26142890 ggtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggt 26142802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 10 - 229
Target Start/End: Original strand, 17993770 - 17993989
Alignment:
Q  10 aaatgaagaagtagcatagttctttgagaatacaataactgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctga 109  Q
    ||||||||||| |||||||| ||||||||| || ||||  ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  17993770 aaatgaagaagaagcatagtcctttgagaagacgataatcgcaattcttgagtcttcaatgctcttgaggagcgacggtgtgatttcatcacctctctga 17993869  T
Q  110 agctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaaactaa 209  Q
    ||||| |||||||| ||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||   |||||| |||||||||||||||||||    
T  17993870 agctctttgtcatcgatgaaggttcgaattcccttgtcagaaagagctttatagagattaccggtgaaaccatatcgagtatcggtacccctgaaactaa 17993969  T
Q  210 tgaacacgtcatagctgaaa 229  Q
    ||||||| ||  ||||||||    
T  17993970 tgaacacatcgaagctgaaa 17993989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 67 - 209
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  67 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccgg 166  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||||| ||||||    
T  167 taaaaccgtggcgagtgtcagtgcccctaaaactaaggaacac 209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 7562 - 7420
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  7562 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccgg 7463  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||||| ||||||    
T  7462 taaaaccgtggcgagtgtcagtgcccctaaaactaaggaacac 7420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 3572 - 3714
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  3572 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 3671  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||||| ||||||    
T  3672 taaaaccgtgccgagtgtcagtgcccctaaaactaaggaacac 3714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 14505 - 14647
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||  |||||||| |||||| |||||| ||||||||||| ||||    
T  14505 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccgg 14604  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| ||||||||    
T  14605 taaaaccgtgccgagtgtcagtgcccctaaaactgatgaacac 14647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 13782 - 13924
Alignment:
Q  74 ttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccgg 173  Q
    |||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||    
T  13782 ttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccgg 13881  T
Q  174 tgaaaccgcgtcgagtgtcggtacccctgaaactaatgaacac 216  Q
    | |||||| | |||||||| || ||||| ||||| | ||||||    
T  13882 taaaaccgtggcgagtgtcagtgcccctaaaactgaggaacac 13924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 4833 - 4939
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||||||||| || ||||| ||||| || ||||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||| |||||| | |    
T  4833 ggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggc 4932  T
Q  186 gagtgtc 192  Q
    |||||||    
T  4933 gagtgtc 4939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 171
Target Start/End: Complemental strand, 16689073 - 16688951
Alignment:
Q  49 tgcaatcctggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtca 148  Q
    ||||||||| |||||||||||    ||||  || || |||||||||| ||||||||||||||| ||||||||||||||||||   ||||||||| |||||    
T  16689073 tgcaatccttgagtcttcaattgccttgataagtgatggtgtgattttgtcacctctctgaagttccttgtcatcaatgaagacacggattcccttgtca 16688974  T
Q  149 gaaagagctttgtagagattacc 171  Q
     | ||||||||||| ||||||||    
T  16688973 catagagctttgtacagattacc 16688951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 58444 - 58526
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagatt 168  Q
    ||||| |||||||||||||  ||||||||  ||||||| |||||||||||||||||| ||||| |||||||| ||||||||||    
T  58444 ggtgttatttcgtcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtcacaaagagctctgtagagatt 58526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 34750 - 34608
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||| ||||| || ||||  ||||||||| ||||||||||||||||  |||||||| ||| | |||||||| | ||||||||  |||| |||||    |    
T  34750 ggtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagc 34651  T
Q  186 gagtgtcggtacccctgaaactaatgaacacgtcatagctgaa 228  Q
    |||||||  |||| || ||||||| ||||||||||||| ||||    
T  34650 gagtgtcactacctctaaaactaaggaacacgtcataggtgaa 34608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 228
Target Start/End: Complemental strand, 116821 - 116679
Alignment:
Q  86 ggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtc 185  Q
    ||||| |||||||||||||  ||||| || ||||||||||||||||| || |||| | |   | ||||| ||||||||||||| || || |||||    |    
T  116821 ggtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaaggtacgaattctcttcctacaaagatctttgtagagatttccagtaaaaccataac 116722  T
Q  186 gagtgtcggtacccctgaaactaatgaacacgtcatagctgaa 228  Q
    |||||||  |||| || ||||||| ||||||||||||| ||||    
T  116721 gagtgtcactacctctaaaactaaggaacacgtcataggtgaa 116679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 18699581 - 18699667
Alignment:
Q  118 gtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccgcgtcgagtgtcggtacccctgaa 204  Q
    |||||||||||||||  |||||||| |||||| |||||||||||||||||  || || ||||||   |||||||| || ||||||||    
T  18699581 gtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaa 18699667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 18655658 - 18655707
Alignment:
Q  118 gtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagat 167  Q
    |||||||||||||||  |||||||| |||||| |||||||||||||||||    
T  18655658 gtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagat 18655707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 18724266 - 18724329
Alignment:
Q  118 gtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagattaccggtgaaaccg 181  Q
    |||||||||||||||  |||||||| |||||| |||||| |||||||||| ||| || ||||||    
T  18724266 gtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatgaccagtaaaaccg 18724329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 18731685 - 18731734
Alignment:
Q  118 gtcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagat 167  Q
    |||||||||||||||  |||||||| |||||| ||||||| |||||||||    
T  18731685 gtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagat 18731734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 159
Target Start/End: Original strand, 241814 - 241916
Alignment:
Q  57 tggagtcttcaatgcttttgaggagcgaaggtgtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcccatgtcagaaagagc 156  Q
    |||||||||||||   |||||| || || ||||||||||| |||||| |   ||||||||||||||| ||||| ||||| |||||  |||||  ||||||    
T  241814 tggagtcttcaattgctttgagaagtgatggtgtgatttcttcaccttttctaagctccttgtcatccatgaaagttcgaattcctttgtcatcaagagc 241913  T
Q  157 ttt 159  Q
    |||    
T  241914 ttt 241916  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 268539 - 268587
Alignment:
Q  119 tcatcaatgaaggttcggattcccatgtcagaaagagctttgtagagat 167  Q
    ||||||||||||||  |||||||| |||||| |||||| ||||||||||    
T  268539 tcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 268587  T

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