View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14097_low_41 (Length: 212)
Name: NF14097_low_41
Description: NF14097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14097_low_41 |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 518225 - 518405
Alignment:
| Q |
18 |
acaaggtatttgataggtgaagacaatggaacatacctaaaggttcctggaaaacaacaatctgttatttcctttaccaaaaaattcaaaccgaatatgc |
117 |
Q |
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| T |
518225 |
acaagctatttgataggtgaagacaatggaacatacctaaaggttcctggaaaacaacaatctgttatttcctttaccaaaaaattcaaaccgaatatgc |
518324 |
T |
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| Q |
118 |
aaatagcaaaaggagatgggttcccttcaaaggttcttttcaatggagaagagtgttcaattccaacccaattccctatgc |
198 |
Q |
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| T |
518325 |
aaatagcaaaaggagatgggttcccttcaaaggttcttttcaatggagaagagtgttcaattccaacccaattccctatgc |
518405 |
T |
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