View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14098_high_22 (Length: 241)
Name: NF14098_high_22
Description: NF14098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14098_high_22 |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 40510517 - 40510739
Alignment:
| Q |
1 |
aaataatatatatatacgaattagagtttaaatctgatannnnnnnnaaggaagaaatccgatatttttagtcagtgactgtttnnnnnnntgtataccg |
100 |
Q |
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| T |
40510517 |
aaataatatatatatacgaatcagagtttaaatctgatattttttttaaggaagaaatccgatatttttagtcactgactgtttaaaaaaatgtataccg |
40510616 |
T |
|
| Q |
101 |
actaatacatggctatatttatcttatttttctgtcatgaacggtcaagaaagaatccatggacaaaagaggtgtgccgaggaacaaaaggaggccagta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40510617 |
actaatacatggctatatttatcttatttttctgtcatgaacggtcaagaaagaatccatggacaaaagaggtgtgccgaggaacaaaaggaggccagta |
40510716 |
T |
|
| Q |
201 |
tactgacaaagtgatattgtcac |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
40510717 |
tactgacaaagtgatattgtcac |
40510739 |
T |
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