View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14098_low_14 (Length: 322)
Name: NF14098_low_14
Description: NF14098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14098_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 300
Target Start/End: Complemental strand, 34442563 - 34442276
Alignment:
| Q |
9 |
gattattctggatcaggaaccttgattttcttgatattttcatctccaaactgtctaaaactacttaagacttatctaaaatgcatnnnnnnnnnnnttc |
108 |
Q |
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|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
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| T |
34442563 |
gattgttctggaccaggaaccttgattttcttgatattttcatctccaaactgtctaaaactacttaagacttatcgaaaatgcataaaaaaa----ttc |
34442468 |
T |
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| Q |
109 |
taaaacacatcatacaacacgacatagtgacatcactcaggaagatcatgttgtatattttgggggactcgcacttatgaggtggataaatcctcttaac |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442467 |
taaaacacatcatacaacacgacatagtgacatcactcaggaagatcatgttgtatattttgggggactcgcacttatgaggtggataaatcctcttaac |
34442368 |
T |
|
| Q |
209 |
ggcagtgacaatgtcacgccacaatttttctaatcattttttattttgtaggtcacatccgaattaatgttggagatattgaccgaggatgc |
300 |
Q |
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|||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34442367 |
ggcagtgacaatgtcacgtcacaatttttataatcattttttattttgtaggtcacatccgaattaatgttggagatattgaccgaggatgc |
34442276 |
T |
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