View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14098_low_20 (Length: 260)
Name: NF14098_low_20
Description: NF14098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14098_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 2313301 - 2313544
Alignment:
| Q |
1 |
tcaaaactgtaattaaatatttttaattagaattctacaatccaattatgaagattgttgaggttagttattgttgttgtatgcaggcagtagctcaaca |
100 |
Q |
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| T |
2313301 |
tcaaaactgtaattaaatatttttgattagaatgttataatccaactacaaagattattgaagttagttattgttgttgtatgcaggcagtagctcaaca |
2313400 |
T |
|
| Q |
101 |
tattaggaggacaataacaatgtcaagtacagtagttaccaatttggttggaccagttcaacaaatgtctttggctaatcatcctgtgaaaggcttgtac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2313401 |
tattaggaggacaataacaatgtcaagtacagtagttaccaatttggttggaccagttcaacaaatgtctttggctaatcatcctgtgaaaggcttgtac |
2313500 |
T |
|
| Q |
201 |
ttcaccttagctggtggtcctgaggtatcatgaattgttatact |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2313501 |
ttcaccttagctggtggtcctgaggtatcatgaattgttatact |
2313544 |
T |
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