View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14098_low_24 (Length: 230)
Name: NF14098_low_24
Description: NF14098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14098_low_24 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 22 - 210
Target Start/End: Complemental strand, 53147427 - 53147239
Alignment:
| Q |
22 |
tcatggcacgtgacgtgattttactaacatcattcccttccaattttacaaacattggaattaattaatacaaaaataaccatgagattgaattgaatta |
121 |
Q |
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| T |
53147427 |
tcatggcacgtgacatgattttactaacatcattctcttccaattttacaaacattggaattaattaagacaaaaataaccatgagattgaattgaatta |
53147328 |
T |
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| Q |
122 |
ccatgtgcagaataaccaatgtagatccacgaaataaattgttgtttaatttttaaaacattaagctattacagtacttagtagtagta |
210 |
Q |
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| T |
53147327 |
ccatgtgcagaataaccaatgtagatccacgaaataaattgttgtttaatttttaaaacattaagctattacagtagttagtagtagta |
53147239 |
T |
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