View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14099_high_6 (Length: 228)

Name: NF14099_high_6
Description: NF14099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14099_high_6
NF14099_high_6
[»] chr8 (4 HSPs)
chr8 (132-228)||(27107359-27107455)
chr8 (131-228)||(26774977-26775074)
chr8 (132-198)||(33541860-33541926)
chr8 (131-201)||(15186178-15186248)
[»] chr6 (13 HSPs)
chr6 (132-228)||(3630326-3630422)
chr6 (132-228)||(3632398-3632494)
chr6 (132-227)||(13056949-13057044)
chr6 (131-227)||(13039508-13039604)
chr6 (131-219)||(24338941-24339029)
chr6 (132-220)||(22490415-22490503)
chr6 (132-201)||(13870840-13870909)
chr6 (134-201)||(10583884-10583951)
chr6 (159-201)||(20219939-20219981)
chr6 (127-172)||(26944921-26944966)
chr6 (132-168)||(12162024-12162060)
chr6 (159-211)||(25477056-25477108)
chr6 (128-164)||(3390128-3390164)
[»] chr7 (8 HSPs)
chr7 (131-219)||(21677795-21677883)
chr7 (132-227)||(27833098-27833193)
chr7 (129-220)||(24748343-24748434)
chr7 (134-220)||(21679759-21679845)
chr7 (132-200)||(44724330-44724398)
chr7 (132-198)||(22829105-22829171)
chr7 (132-201)||(39146455-39146524)
chr7 (132-164)||(11355010-11355042)
[»] chr3 (15 HSPs)
chr3 (132-220)||(5927236-5927324)
chr3 (134-201)||(1627171-1627238)
chr3 (132-201)||(7754063-7754132)
chr3 (132-227)||(28100503-28100598)
chr3 (127-220)||(36011522-36011615)
chr3 (132-228)||(43423904-43424000)
chr3 (132-198)||(28137765-28137831)
chr3 (131-228)||(8183154-8183250)
chr3 (127-228)||(43421875-43421976)
chr3 (134-200)||(28102491-28102558)
chr3 (132-171)||(53468963-53469002)
chr3 (131-172)||(13420687-13420728)
chr3 (132-172)||(562208-562248)
chr3 (132-172)||(25635122-25635162)
chr3 (131-172)||(25633230-25633271)
[»] chr2 (7 HSPs)
chr2 (132-198)||(22163419-22163485)
chr2 (128-227)||(3021835-3021933)
chr2 (132-227)||(15539940-15540035)
chr2 (130-200)||(11740010-11740080)
chr2 (131-220)||(14836970-14837058)
chr2 (134-220)||(34980050-34980136)
chr2 (132-163)||(38019884-38019915)
[»] chr4 (7 HSPs)
chr4 (132-201)||(6132647-6132716)
chr4 (132-224)||(38270451-38270543)
chr4 (132-198)||(47564498-47564564)
chr4 (132-178)||(27498965-27499011)
chr4 (132-168)||(2891134-2891170)
chr4 (159-220)||(3937678-3937739)
chr4 (131-164)||(18537997-18538030)
[»] chr1 (10 HSPs)
chr1 (132-220)||(50249045-50249133)
chr1 (133-198)||(25251749-25251814)
chr1 (132-219)||(17323785-17323872)
chr1 (134-228)||(18839311-18839404)
chr1 (132-198)||(25248988-25249054)
chr1 (132-198)||(31489727-31489793)
chr1 (132-201)||(17186619-17186688)
chr1 (132-164)||(17352797-17352829)
chr1 (132-172)||(18801069-18801109)
chr1 (132-164)||(31423403-31423435)
[»] chr5 (7 HSPs)
chr5 (132-198)||(695631-695697)
chr5 (135-188)||(2723698-2723751)
chr5 (132-192)||(20044757-20044817)
chr5 (132-193)||(24126579-24126640)
chr5 (132-228)||(20042770-20042866)
chr5 (159-220)||(10474794-10474856)
chr5 (149-200)||(17072619-17072670)


Alignment Details
Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 27107455 - 27107359
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  27107455 tgttgtgaaagtgcctcaaaattgaagaaattagaattctggaagctgaaaatcgatggccgattttcagagcatggtggccgattttggactctgt 27107359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 26774977 - 26775074
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| | || | ||||||||| |||||    
T  26774977 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggtagcagaaaatcggtggccgattttcagagcacgttgaccgattttggaatctgt 26775074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 33541926 - 33541860
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33541926 tgttgtgaaagtgcctcaaaattaaagaaattggaattctggaagctgaaaatcggtggccgatttt 33541860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 15186248 - 15186178
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||    
T  15186248 atgttgtgaaagtgactcaaaattgaagaaataggaattatggaagcaaaaaatcggtcgtcgattttcag 15186178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 3630422 - 3630326
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  3630422 tgttgtgaaagtgcctcaaaattgaagaaattggaattctagaagctgaaaatcggtggccgattttcagagcattgtggccgattttggactctgt 3630326  T

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Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 3632494 - 3632398
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||| |||| |||||| |||||||||||||||    
T  3632494 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcgatgcccgattttcaaagcacggtggccgattttggactctgt 3632398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 13056949 - 13057044
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| ||  |||||| ||||||| ||||||    
T  13056949 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagcagaaaattggtggccgattttcagggctcggtggccgattttgcactctg 13057044  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 13039508 - 13039604
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||||||||||| ||  |||||| ||||||| ||||||    
T  13039508 atgttgtgaaagtgcctcaaaattgaagaaattgaaattctggaagcagaaaaccggtggccgattttcagggctcggtggccgattttgcactctg 13039604  T

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Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 24339029 - 24338941
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgatttt 219  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||| || ||| ||||||    
T  24339029 atgttgtgaaagtgcctcaaaattgaagaaattgaaattctggaagatgaaaatcggtggccgattttcagggcacggaggccgatttt 24338941  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 22490415 - 22490503
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||| ||| |||||| |||||||    
T  22490415 tgttatgaaagtgcctcaaaattgaagaaattagaattctgaaagctgaaaatcgatggccgattttcagggcacggtggccgattttg 22490503  T

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Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 13870909 - 13870840
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||| ||||||||||    
T  13870909 tgttgtgaaagtgccttaaaattgaagaaattggaattttggaagcagaaaatcggtggtcgattttcag 13870840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 10583884 - 10583951
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| | ||||||||    
T  10583884 ttgtgaaagtgccttaaaattgaagaaattggaattctggaagctgaaaaccggtggtccattttcag 10583951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 20219939 - 20219981
Alignment:
Q  159 aaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||| |||||||| ||||||||||||||||||||||    
T  20219939 aaattggaattatggaagctgaaaatcggtggccgattttcag 20219981  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 26944921 - 26944966
Alignment:
Q  127 gaaaatgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||    
T  26944921 gaaattgttgtgaaagtgactcaaaattgaagaaattggagttctg 26944966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 168
Target Start/End: Complemental strand, 12162060 - 12162024
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaat 168  Q
    ||||||||||||||||||||||| |||||||||||||    
T  12162060 tgttgtgaaagtgcctcaaaattaaagaaattggaat 12162024  T

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Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 25477056 - 25477108
Alignment:
Q  159 aaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtgg 211  Q
    |||||||||||| |||||| ||||| ||||||||||||||||| ||| |||||    
T  25477056 aaattggaattccggaagcaaaaaaccggtggccgattttcagggcacggtgg 25477108  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 3390128 - 3390164
Alignment:
Q  128 aaaatgttgtgaaagtgcctcaaaattgaagaaattg 164  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  3390128 aaaatgttgtgaaagtgactcaaaattggagaaattg 3390164  T

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Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 21677795 - 21677883
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgatttt 219  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||  ||||||||||||    
T  21677795 atgttgtgaaagtgcctcaaaattgaagaaattggaatcctggaagctgaaaatcggtggccgattttcagggcacagtggctgatttt 21677883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 27833193 - 27833098
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||| |  ||||||||||||||| ||||||    
T  27833193 tgttgtgaaagtgcctcaaaattgaagaaattagaattctggaagcagaaaatcggtggccgattttcagggtttggtggctgattttgcactctg 27833098  T

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Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 24748343 - 24748434
Alignment:
Q  129 aaatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||| ||| |||| | |||||||    
T  24748343 aaatgttgtgaaagtgactcaaaattgaaaaaattagaattctggaagctgaaaatcggtggctgattttcagggcacggtgaccgattttg 24748434  T

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Target: chr7; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 21679759 - 21679845
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||  || |||||||||| |||||||    
T  21679759 ttgtgaaagtgcctcaaaaattaagaaattggaattctggaagctgaacatcggtggccgatttgtagggcatggtggccgattttg 21679845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 44724330 - 44724398
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttca 200  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||    
T  44724330 tgttgtgaacgtgcctcaaaattgaaaaaattgaaattctggaagctgaaaatcggtggccgattttca 44724398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 22829171 - 22829105
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    ||||||||||||| |||||||||||||||||||||||||||||||   |||||| ||||||||||||    
T  22829171 tgttgtgaaagtgactcaaaattgaagaaattggaattctggaagtagaaaatcagtggccgatttt 22829105  T

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Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 39146524 - 39146455
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||  |||| |||||| ||||||||||    
T  39146524 tgttgtgaaagtgactcaaaattgaagaaattggaattttggaagcagaaaaccggtggtcgattttcag 39146455  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 11355010 - 11355042
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattg 164  Q
    ||||||||||||| |||||||||||||||||||    
T  11355010 tgttgtgaaagtgactcaaaattgaagaaattg 11355042  T

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Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 5927324 - 5927236
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| |||||| |||||||    
T  5927324 tgttgtgaaagtgccttaaaattgaagaaattggaattttggaagctgaaaatcggtggctgattttcagagcacggtggccgattttg 5927236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 1627238 - 1627171
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1627238 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcggtggccgattttcag 1627171  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 7754063 - 7754132
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7754063 tgttgtgaaagtggctcaaaattgaagaaattggaattctggaagctaaaaatcgctggccgattttcag 7754132  T

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Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 28100598 - 28100503
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||||| |  ||||||| ||||||| ||||||    
T  28100598 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagtagaaaatcgatggccgattttcagggattggtggccgattttgcactctg 28100503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 36011522 - 36011615
Alignment:
Q  127 gaaaatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| |||||||  ||| |||||| |||||||    
T  36011522 gaaattgttgtgaaagtgcctcaaaattgaagaaattggaaatctggaaggtgaaaatcggtggccaattttcaaggcacggtggccgattttg 36011615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 43424000 - 43423904
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||||||||||||||||||||||||||||||| ||   |||| ||||||||||| | |||| || |||||| |||||||||||||||    
T  43424000 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggtagtagaaaaccggtggccgatatccagaccacggtggccgattttggactctgt 43423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 28137831 - 28137765
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  28137831 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagtagaaaatcggtggccgatttt 28137765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 8183250 - 8183154
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||  |||||| |||  |||||||||||||| |||||| || ||||||||||||    
T  8183250 atgttgtgaaagtgcctcaaaattgaagaaattgaaattctgatagcagaaaatcagtgatcgattttcagagcacggtggccga-tttggactctgt 8183154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 43421976 - 43421875
Alignment:
Q  127 gaaaatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactct 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || |||  |||||   ||||||||||||| |  | |||||| |||||||||||||    
T  43421976 gaaattgttgtgaaagtgcctcaaaattgaagaaattggaattcaggtagcagaaaataaatggccgattttcaaactacggtggccgattttggactct 43421877  T
Q  227 gt 228  Q
    ||    
T  43421876 gt 43421875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Complemental strand, 28102558 - 28102491
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaa-ttggaattctggaagctaaaaatcggtggccgattttca 200  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||  |||||||| ||| ||||||||    
T  28102558 ttgtgaaagtgcctcaaaattgaataaatttggaattctgaaagcagaaaatcgggggctgattttca 28102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 171
Target Start/End: Complemental strand, 53469002 - 53468963
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattct 171  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  53469002 tgttgtgaaagtgcctcaaaattgaagaaattagaattct 53468963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 13420728 - 13420687
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    |||||||||||||| ||||||||||||||||||||| |||||    
T  13420728 atgttgtgaaagtgactcaaaattgaagaaattggagttctg 13420687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 562248 - 562208
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  562248 tgttgtgaaagtgactcaaaattgaagaaattggagttctg 562208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 25635122 - 25635162
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  25635122 tgttgtgaaagtgactcaaaattgaagaaattggagttctg 25635162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 25633230 - 25633271
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    ||||||||||||||  |||||||||||||||||||| |||||    
T  25633230 atgttgtgaaagtgattcaaaattgaagaaattggagttctg 25633271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 22163485 - 22163419
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22163485 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcggtggccgatttt 22163419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 3021835 - 3021933
Alignment:
Q  128 aaaatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||| ||  |||||| ||||||| ||||||    
T  3021835 aaaatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagcaggaaatccgtggccgattttcagggctcggtggc-gattttgcactctg 3021933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 15540035 - 15539940
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctg 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||  ||  |||||| ||||||| ||||||    
T  15540035 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagcagaaaatcgatggccgattttcaaggctcggtggccgattttgcactctg 15539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 11740080 - 11740010
Alignment:
Q  130 aatgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  11740080 aatgttgtgaaagtgcctcaaaattgaagaaattggaattctgaaagttgaaaatcggtggccgattttca 11740010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 220
Target Start/End: Original strand, 14836970 - 14837058
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||| ||| |||||| |||||||    
T  14836970 atgttgtgaaagtgcctcaaaattgaagaaattagaattctggaagctgaaaattggtggccg-ttttcagggcacggtggccgattttg 14837058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 34980136 - 34980050
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| ||  || |||||| |||||||    
T  34980136 ttgtgaaaatgcctcaaaattgaagaaattagaattctagaagctgaaaatcggtggccgatttttaggacacggtggccgattttg 34980050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 163
Target Start/End: Original strand, 38019884 - 38019915
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaatt 163  Q
    ||||||||||||||||||||||||||||||||    
T  38019884 tgttgtgaaagtgcctcaaaattgaagaaatt 38019915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 6132647 - 6132716
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  6132647 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcggtggctgattttcag 6132716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 38270543 - 38270451
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggact 224  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||  ||||||||||||||||||||| |||| | | || |||||||||||    
T  38270543 tgttgtgaaagtgcctcaaaattgaagaaattgaaattctggtagcagaaaatcggtggccgattttcaaagcacgatagccgattttggact 38270451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 47564498 - 47564564
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    |||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  47564498 tgttgtgaaagtgcctcaaaattgaagaaattagaattctggaagcagaaaatcggtggccgatttt 47564564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 178
Target Start/End: Original strand, 27498965 - 27499011
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagct 178  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27498965 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagct 27499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 168
Target Start/End: Original strand, 2891134 - 2891170
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaat 168  Q
    |||||||||||||||||||||||||||||||||||||    
T  2891134 tgttgtgaaagtgcctcaaaattgaagaaattggaat 2891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 3937739 - 3937678
Alignment:
Q  159 aaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||||||||||||| ||||  |||||||||||||||||||||| ||  |||||| |||||||    
T  3937739 aaattggaattctgaaagcagaaaatcggtggccgattttcagggctcggtggccgattttg 3937678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 18538030 - 18537997
Alignment:
Q  131 atgttgtgaaagtgcctcaaaattgaagaaattg 164  Q
    |||||||||||||| |||||||||||||||||||    
T  18538030 atgttgtgaaagtgactcaaaattgaagaaattg 18537997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 50249133 - 50249045
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  || ||||||||| ||| |||||| |||||||    
T  50249133 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcggccgctgattttcagggcacggtggccgattttg 50249045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 25251814 - 25251749
Alignment:
Q  133 gttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  25251814 gttgtgaaagtgcctcaaaattgaagaaattggaattctggaagcagaaaatcggtggccgatttt 25251749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 132 - 219
Target Start/End: Original strand, 17323785 - 17323872
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgatttt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||| ||  |||||| ||||||    
T  17323785 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagtagaaaatcggtgaccgattttcagggctcggtggccgatttt 17323872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 18839311 - 18839404
Alignment:
Q  134 ttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||||||||||||| ||||||||||||||| | |  ||||||| ||||||| |||||||||| |||||| |||||||||||||||    
T  18839311 ttgtgaaagtgcctcaaaattgaataaattggaattctggtaacagaaaatcgatggccga-tttcagagcacggtggccgattttggactctgt 18839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 25249054 - 25248988
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  25249054 tgttgtgatagtgcctcaaaattgaagaaattggaattctggaagcagaaaatcggtggccgatttt 25248988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 31489727 - 31489793
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||  ||||| || ||||||||||    
T  31489727 tgttgcgaaagtgccttaaaattgaagaaattggaattctggaagcagaaaattgggggccgatttt 31489793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 201
Target Start/End: Complemental strand, 17186688 - 17186619
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcag 201  Q
    ||||||||||| | ||||||||||||||||||| || |||||||||  |||||||||||| |||||||||    
T  17186688 tgttgtgaaagcgactcaaaattgaagaaattgaaaatctggaagcagaaaatcggtggctgattttcag 17186619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 17352797 - 17352829
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattg 164  Q
    ||||||||||||| |||||||||||||||||||    
T  17352797 tgttgtgaaagtgactcaaaattgaagaaattg 17352829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 18801109 - 18801069
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctg 172  Q
    ||||||||||||| ||||||||||||| ||||||| |||||    
T  18801109 tgttgtgaaagtgactcaaaattgaaggaattggagttctg 18801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 31423435 - 31423403
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattg 164  Q
    ||||||||||||| |||||||||||||||||||    
T  31423435 tgttgtgaaagtgactcaaaattgaagaaattg 31423403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 695631 - 695697
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgatttt 198  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||    
T  695631 tgttgtgaaagtgcctcaaaattgaagaaattgaaattctggaagctgaaaattggtggccgatttt 695697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 2723698 - 2723751
Alignment:
Q  135 tgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2723698 tgtgaaagtgcctcaaaattgaagaaattggaattctggaagctgaaaatcggt 2723751  T

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Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 20044757 - 20044817
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggcc 192  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  20044757 tgttgtgaaagtgactcaaaattgaagaaattggaattctggaagcagaaaatcggtggcc 20044817  T

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Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 24126579 - 24126640
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccg 193  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  24126579 tgttgtgaaagtgtctcaaaattgaagaaattggaattctagaagctgaaaattggtggccg 24126640  T

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Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 20042770 - 20042866
Alignment:
Q  132 tgttgtgaaagtgcctcaaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttcagagcatggtggctgattttggactctgt 228  Q
    |||||||||||||  | ||||||||||||||||||||||||||||   ||||| | |||||||||||||| ||| |||||| || |||| |||||||    
T  20042770 tgttgtgaaagtgatttaaaattgaagaaattggaattctggaagaagaaaattgatggccgattttcagggcacggtggccgaatttgcactctgt 20042866  T

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Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 10474856 - 10474794
Alignment:
Q  159 aaattggaattctggaagct-aaaaatcggtggccgattttcagagcatggtggctgattttg 220  Q
    |||||||||||||||||||| |||||| |||||||||||||||| ||| |||||| |||||||    
T  10474856 aaattggaattctggaagctgaaaaattggtggccgattttcagggcacggtggccgattttg 10474794  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 17072619 - 17072670
Alignment:
Q  149 aaaattgaagaaattggaattctggaagctaaaaatcggtggccgattttca 200  Q
    |||||| |||||||||||||| || ||||| |||||||||||||||||||||    
T  17072619 aaaattaaagaaattggaattttgaaagctgaaaatcggtggccgattttca 17072670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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