View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14100_low_2 (Length: 668)

Name: NF14100_low_2
Description: NF14100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14100_low_2
NF14100_low_2
[»] chr7 (49 HSPs)
chr7 (19-358)||(8346701-8347036)
chr7 (383-668)||(8346375-8346660)
chr7 (376-668)||(8329888-8330179)
chr7 (380-668)||(8343646-8343930)
chr7 (144-330)||(8330202-8330391)
chr7 (147-330)||(8343957-8344147)
chr7 (378-668)||(24725316-24725609)
chr7 (381-668)||(4247356-4247641)
chr7 (381-640)||(44944717-44944978)
chr7 (380-665)||(14055250-14055539)
chr7 (380-665)||(14365278-14365567)
chr7 (382-668)||(5058530-5058813)
chr7 (380-668)||(27221417-27221699)
chr7 (381-668)||(5715290-5715570)
chr7 (409-668)||(17811375-17811633)
chr7 (381-570)||(24990012-24990200)
chr7 (380-565)||(26281256-26281439)
chr7 (379-530)||(9685224-9685375)
chr7 (19-129)||(8330415-8330525)
chr7 (380-665)||(7730206-7730472)
chr7 (19-124)||(8344183-8344288)
chr7 (451-668)||(20570729-20570944)
chr7 (381-525)||(22687649-22687793)
chr7 (390-657)||(11324988-11325252)
chr7 (380-519)||(39182259-39182397)
chr7 (381-519)||(11326386-11326524)
chr7 (388-505)||(8571250-8571367)
chr7 (381-665)||(21846294-21846554)
chr7 (380-572)||(26617415-26617606)
chr7 (402-539)||(27509914-27510051)
chr7 (381-668)||(6916786-6917063)
chr7 (582-668)||(8329823-8329909)
chr7 (582-665)||(8346313-8346396)
chr7 (421-519)||(1977692-1977790)
chr7 (379-473)||(21157811-21157905)
chr7 (518-668)||(26565392-26565540)
chr7 (584-665)||(39182357-39182438)
chr7 (581-668)||(24989618-24989704)
chr7 (377-467)||(8630001-8630091)
chr7 (381-476)||(30294175-30294267)
chr7 (380-475)||(26565663-26565758)
chr7 (581-668)||(30294444-30294531)
chr7 (385-454)||(4574475-4574544)
chr7 (581-668)||(8572336-8572422)
chr7 (548-664)||(27509260-27509374)
chr7 (479-519)||(8329867-8329907)
chr7 (621-668)||(8304324-8304371)
chr7 (479-519)||(8346354-8346394)
chr7 (584-624)||(9685235-9685275)
[»] chr4 (34 HSPs)
chr4 (380-665)||(5361812-5362093)
chr4 (403-664)||(9911259-9911518)
chr4 (383-668)||(5375666-5375950)
chr4 (380-570)||(13023566-13023758)
chr4 (379-668)||(10142897-10143185)
chr4 (381-668)||(9770112-9770397)
chr4 (380-668)||(36120823-36121108)
chr4 (380-569)||(8889227-8889415)
chr4 (382-665)||(17466080-17466361)
chr4 (379-530)||(13551602-13551753)
chr4 (379-668)||(23064805-23065094)
chr4 (380-573)||(37240261-37240448)
chr4 (381-514)||(8011212-8011345)
chr4 (382-475)||(7044728-7044821)
chr4 (377-474)||(24719513-24719610)
chr4 (380-485)||(18459733-18459838)
chr4 (532-668)||(24719725-24719860)
chr4 (381-475)||(4156763-4156857)
chr4 (518-668)||(8010980-8011129)
chr4 (385-485)||(7815561-7815661)
chr4 (585-668)||(6346799-6346882)
chr4 (379-486)||(6347088-6347195)
chr4 (379-461)||(7452418-7452499)
chr4 (581-668)||(7044961-7045048)
chr4 (525-668)||(9149566-9149709)
chr4 (595-668)||(37240450-37240524)
chr4 (381-454)||(9149791-9149864)
chr4 (618-668)||(55476223-55476273)
chr4 (479-516)||(4157053-4157090)
chr4 (445-485)||(7803070-7803110)
chr4 (584-624)||(13551613-13551653)
chr4 (377-453)||(18327339-18327415)
chr4 (377-453)||(18437982-18438058)
chr4 (402-446)||(46664421-46664465)
[»] chr8 (34 HSPs)
chr8 (377-668)||(11879596-11879885)
chr8 (377-668)||(11897012-11897301)
chr8 (378-668)||(15294667-15294954)
chr8 (378-668)||(15475036-15475323)
chr8 (380-668)||(5922048-5922333)
chr8 (380-569)||(31424162-31424350)
chr8 (377-665)||(29384159-29384449)
chr8 (381-668)||(17646993-17647282)
chr8 (381-668)||(45403029-45403314)
chr8 (383-668)||(19704301-19704583)
chr8 (430-663)||(23142224-23142454)
chr8 (376-567)||(22910146-22910336)
chr8 (420-665)||(6810861-6811101)
chr8 (385-569)||(3094185-3094378)
chr8 (380-569)||(27836406-27836594)
chr8 (377-668)||(7489127-7489417)
chr8 (402-664)||(32424356-32424615)
chr8 (380-484)||(24056594-24056698)
chr8 (385-571)||(6292282-6292467)
chr8 (380-456)||(477101-477177)
chr8 (470-564)||(9212202-9212295)
chr8 (380-476)||(15761473-15761569)
chr8 (548-663)||(15761207-15761322)
chr8 (581-654)||(8582241-8582314)
chr8 (382-426)||(9036757-9036801)
chr8 (380-428)||(23136348-23136396)
chr8 (598-668)||(17566313-17566383)
chr8 (402-519)||(15231745-15231862)
chr8 (583-668)||(24056414-24056499)
chr8 (584-624)||(22910193-22910233)
chr8 (584-624)||(31424261-31424301)
chr8 (597-663)||(22910052-22910118)
chr8 (582-668)||(24414131-24414217)
chr8 (584-624)||(9212246-9212286)
[»] chr5 (22 HSPs)
chr5 (381-668)||(43234868-43235153)
chr5 (382-668)||(18843716-18844000)
chr5 (380-668)||(19578941-19579228)
chr5 (380-665)||(21059003-21059285)
chr5 (382-668)||(23172272-23172560)
chr5 (377-640)||(18051405-18051663)
chr5 (389-668)||(27340031-27340307)
chr5 (381-665)||(38158111-38158383)
chr5 (380-547)||(22645681-22645849)
chr5 (402-665)||(41688513-41688772)
chr5 (430-573)||(19979648-19979790)
chr5 (430-668)||(20320992-20321228)
chr5 (381-506)||(20923718-20923843)
chr5 (385-454)||(24106645-24106714)
chr5 (383-455)||(19042444-19042516)
chr5 (383-447)||(20320926-20320990)
chr5 (525-668)||(26021464-26021604)
chr5 (621-668)||(41427657-41427704)
chr5 (480-522)||(19042406-19042448)
chr5 (618-668)||(19377838-19377888)
chr5 (481-519)||(43005747-43005785)
chr5 (584-624)||(19979697-19979737)
[»] chr1 (37 HSPs)
chr1 (381-668)||(23528656-23528941)
chr1 (377-668)||(16125299-16125591)
chr1 (380-668)||(13100190-13100475)
chr1 (379-668)||(9954877-9955166)
chr1 (380-668)||(25146612-25146898)
chr1 (378-610)||(9327116-9327347)
chr1 (380-668)||(9351907-9352193)
chr1 (380-666)||(18304657-18304941)
chr1 (377-668)||(21846118-21846401)
chr1 (381-635)||(13276143-13276395)
chr1 (383-668)||(19009792-19010073)
chr1 (382-571)||(42180005-42180193)
chr1 (383-665)||(12513283-12513553)
chr1 (381-573)||(9128778-9128969)
chr1 (480-665)||(47785958-47786140)
chr1 (379-519)||(41032661-41032801)
chr1 (382-668)||(17869594-17869873)
chr1 (470-663)||(32881416-32881600)
chr1 (378-514)||(17055995-17056131)
chr1 (381-456)||(30619075-30619150)
chr1 (379-485)||(18337547-18337652)
chr1 (381-476)||(14074404-14074499)
chr1 (581-668)||(16434709-16434794)
chr1 (458-562)||(18228278-18228380)
chr1 (381-468)||(12800623-12800710)
chr1 (581-668)||(17055763-17055850)
chr1 (380-447)||(34478833-34478900)
chr1 (584-664)||(41032621-41032701)
chr1 (379-426)||(47785790-47785837)
chr1 (598-668)||(14074327-14074397)
chr1 (392-473)||(8772715-8772796)
chr1 (380-473)||(24117006-24117099)
chr1 (384-467)||(27917495-27917578)
chr1 (597-664)||(30619156-30619223)
chr1 (439-473)||(27502239-27502273)
chr1 (584-624)||(9128831-9128871)
chr1 (584-624)||(9327206-9327246)
[»] scaffold0186 (1 HSPs)
scaffold0186 (377-668)||(8439-8726)
[»] chr6 (40 HSPs)
chr6 (381-668)||(15527954-15528239)
chr6 (380-665)||(23897810-23898092)
chr6 (380-665)||(30912253-30912542)
chr6 (378-668)||(17543574-17543872)
chr6 (381-668)||(26053140-26053425)
chr6 (381-668)||(26073193-26073478)
chr6 (380-668)||(7223518-7223800)
chr6 (381-607)||(17250057-17250280)
chr6 (380-668)||(19748332-19748618)
chr6 (377-668)||(17103198-17103480)
chr6 (427-570)||(21354786-21354928)
chr6 (380-646)||(10508883-10509153)
chr6 (403-547)||(22498848-22498992)
chr6 (379-506)||(6943464-6943591)
chr6 (380-519)||(27233268-27233407)
chr6 (380-549)||(11327532-11327701)
chr6 (381-549)||(7918342-7918510)
chr6 (384-540)||(2912218-2912373)
chr6 (380-473)||(18491074-18491167)
chr6 (380-460)||(5422798-5422878)
chr6 (515-668)||(7918194-7918343)
chr6 (402-476)||(4841953-4842025)
chr6 (383-458)||(3573984-3574059)
chr6 (581-668)||(4841673-4841760)
chr6 (582-668)||(2912105-2912191)
chr6 (581-668)||(11327406-11327493)
chr6 (581-668)||(22498284-22498371)
chr6 (380-458)||(10958239-10958317)
chr6 (380-485)||(12245108-12245213)
chr6 (408-473)||(18490998-18491063)
chr6 (384-473)||(27890137-27890225)
chr6 (581-668)||(3573744-3573831)
chr6 (408-473)||(18490922-18490987)
chr6 (584-625)||(27233267-27233308)
chr6 (384-473)||(33583766-33583855)
chr6 (406-473)||(8285760-8285827)
chr6 (503-559)||(27614594-27614651)
chr6 (404-449)||(7359871-7359916)
chr6 (388-445)||(8545030-8545087)
chr6 (584-624)||(17250155-17250195)
[»] chr2 (31 HSPs)
chr2 (377-668)||(31237820-31238110)
chr2 (382-664)||(35565802-35566082)
chr2 (380-665)||(15588702-15588979)
chr2 (377-668)||(1404779-1405068)
chr2 (379-549)||(30432417-30432587)
chr2 (379-668)||(36429846-36430133)
chr2 (383-572)||(31578007-31578194)
chr2 (380-668)||(20063713-20064008)
chr2 (380-510)||(23863321-23863451)
chr2 (464-665)||(1690575-1690774)
chr2 (383-514)||(25539222-25539353)
chr2 (381-507)||(19491855-19491982)
chr2 (380-476)||(1690796-1690892)
chr2 (380-476)||(5395682-5395778)
chr2 (378-486)||(15266079-15266187)
chr2 (381-475)||(16766710-16766804)
chr2 (518-668)||(16766922-16767070)
chr2 (409-473)||(34841584-34841648)
chr2 (548-668)||(13502517-13502637)
chr2 (417-476)||(31023259-31023318)
chr2 (548-668)||(19262160-19262279)
chr2 (518-668)||(25538989-25539138)
chr2 (518-668)||(27406927-27407076)
chr2 (377-476)||(17995051-17995150)
chr2 (377-460)||(19245149-19245232)
chr2 (581-668)||(30433013-30433100)
chr2 (380-466)||(24473335-24473420)
chr2 (479-519)||(13502561-13502601)
chr2 (380-468)||(27750194-27750282)
chr2 (480-519)||(16766987-16767026)
chr2 (402-459)||(15516610-15516667)
[»] chr3 (44 HSPs)
chr3 (379-668)||(28745768-28746061)
chr3 (380-547)||(29067283-29067450)
chr3 (379-663)||(39427900-39428183)
chr3 (380-661)||(8155980-8156261)
chr3 (379-668)||(24620041-24620334)
chr3 (381-665)||(22137278-22137559)
chr3 (454-664)||(42696920-42697129)
chr3 (386-668)||(17064326-17064592)
chr3 (382-530)||(3449272-3449419)
chr3 (381-530)||(20756039-20756188)
chr3 (390-573)||(21963438-21963620)
chr3 (390-573)||(21985874-21986056)
chr3 (381-507)||(30727694-30727820)
chr3 (402-568)||(22494731-22494889)
chr3 (380-485)||(27676355-27676460)
chr3 (470-572)||(15515195-15515296)
chr3 (378-527)||(25870350-25870508)
chr3 (380-530)||(22356032-22356183)
chr3 (381-475)||(24649724-24649818)
chr3 (380-473)||(15806543-15806635)
chr3 (581-668)||(27676634-27676721)
chr3 (378-477)||(17796374-17796473)
chr3 (378-477)||(19104814-19104913)
chr3 (403-485)||(10872971-10873053)
chr3 (538-665)||(25870169-25870294)
chr3 (581-668)||(6136413-6136500)
chr3 (581-668)||(13286142-13286229)
chr3 (382-460)||(28135723-28135801)
chr3 (581-667)||(28135960-28136046)
chr3 (378-477)||(17796265-17796364)
chr3 (378-477)||(17796483-17796582)
chr3 (378-477)||(19104705-19104804)
chr3 (378-477)||(19104923-19105022)
chr3 (548-668)||(20756188-20756307)
chr3 (581-665)||(3449157-3449241)
chr3 (581-663)||(29067475-29067557)
chr3 (381-473)||(13005927-13006019)
chr3 (479-519)||(27676637-27676677)
chr3 (385-429)||(42696870-42696914)
chr3 (581-668)||(10872559-10872646)
chr3 (479-519)||(6136457-6136497)
chr3 (479-519)||(13286145-13286185)
chr3 (624-668)||(22971050-22971094)
chr3 (479-519)||(25870210-25870250)
[»] scaffold0417 (1 HSPs)
scaffold0417 (380-668)||(7299-7585)
[»] scaffold0042 (1 HSPs)
scaffold0042 (380-668)||(93549-93834)
[»] scaffold0510 (2 HSPs)
scaffold0510 (380-519)||(91-231)
scaffold0510 (584-665)||(51-131)
[»] scaffold0603 (2 HSPs)
scaffold0603 (518-668)||(8803-8952)
scaffold0603 (377-460)||(9070-9153)
[»] scaffold0048 (4 HSPs)
scaffold0048 (380-473)||(48825-48918)
scaffold0048 (583-668)||(48506-48591)
scaffold0048 (583-668)||(61158-61243)
scaffold0048 (421-475)||(61418-61472)
[»] scaffold0016 (2 HSPs)
scaffold0016 (581-668)||(56269-56356)
scaffold0016 (502-546)||(58746-58790)
[»] scaffold0036 (1 HSPs)
scaffold0036 (380-485)||(37191-37296)
[»] scaffold0115 (1 HSPs)
scaffold0115 (381-466)||(35103-35188)
[»] scaffold0534 (1 HSPs)
scaffold0534 (598-668)||(885-955)
[»] scaffold1892 (1 HSPs)
scaffold1892 (419-484)||(886-951)


Alignment Details
Target: chr7 (Bit Score: 261; Significance: 1e-145; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 19 - 358
Target Start/End: Complemental strand, 8347036 - 8346701
Alignment:
Q  19 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcaga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8347036 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacattgagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcaga 8346937  T
Q  119 ttttcataatgnnnnnnnnnnnnnnagggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaactt 218  Q
    |||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8346936 ttttcataatgttttttttttt---agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaaatt 8346840  T
Q  219 gttactttgattttattacaatataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaac 318  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  8346839 gttactttgattttattacaatataat-ttttcaaacctttagtttgattattattattatcttatagtgttaaagtttatgataatggttgcattaaac 8346741  T
Q  319 ttgttaattaaaccattgttgtcaaaatcctttactttgg 358  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8346740 ttgttaattaaaccattgttgtcaaaatcctttactttgg 8346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 383 - 668
Target Start/End: Complemental strand, 8346660 - 8346375
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  483 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 582  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||       ||    
T  8346560 tccatcgattttaattgcgattttacgatttcttataaactaagtcatctatgtctatatatcattttataacatatatttagtattattatttttttgg 8346461  T
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||    
T  8346460 taaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgatt 8346375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 376 - 668
Target Start/End: Complemental strand, 8330179 - 8329888
Alignment:
Q  376 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8330179 aaatcattgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaata 8330080  T
Q  476 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta-ttattan 574  Q
    | |||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||      
T  8330079 ggaaaaattcattgattttaattgcgattttacgattttttataaactaagtcatttatgactatataccattttataacatatacttattatttatt-- 8329982  T
Q  575 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
          ||||||||||||||||||||||||| |||| | |||||||||||||||||||||| |||| || ||||||||||||| ||||||||||    
T  8329981 ttttttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgatt 8329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 380 - 668
Target Start/End: Complemental strand, 8343930 - 8343646
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  8343930 cattgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaa 8343831  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||          
T  8343830 aaatccatcaattttaattgcgattttacgatttcttataaactaagtcatctatgattatataccattttataagttatatttagtattattattttt- 8343732  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
       ||||||||||||| |||||||||||||| | ||||| |||||||||||||||| |||| || ||||||||| ||||||||||||||    
T  8343731 ---taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgatt 8343646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 144 - 330
Target Start/End: Complemental strand, 8330391 - 8330202
Alignment:
Q  144 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaatgataatttttgcattgaacttgttactttgattttattacaatata 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8330391 agggaagattttcataatgtttgattatctctaactaatagtagtcatgttaaagataatttttgcattgaacttgttactttgattttattacaatata 8330292  T
Q  244 atgttttcaaacctttagtttgattattatta---ttatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 330  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8330291 atgttttcaaacctttagtttgattattattattattatcttacagtgttaaagtttatgataatgtttgcattaaacttgttaattaaa 8330202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 147 - 330
Target Start/End: Complemental strand, 8344147 - 8343957
Alignment:
Q  147 gaagattttcataatgtttgattatctctaactaa------tagtagtcatgttaa-tgataatttttgcattgaacttgttactttgattttattacaa 239  Q
    ||||||||||||||||||||||||||||||| |||      ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  8344147 gaagattttcataatgtttgattatctctaattaactaatatagtagtcatgttaaatgataatttttgcattgaacttgttactttgactttattacaa 8344048  T
Q  240 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgctttaaacttgttaattaaa 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8344047 tataatgttttcaaacctttagtttgattattattattatcttacagtgttaaagtttatgataatgtttgcatttaacttgttaattaaa 8343957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 378 - 668
Target Start/End: Complemental strand, 24725609 - 24725316
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    ||||||||||||||||||| ||| ||||||||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||     
T  24725609 atcattgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaatagg 24725510  T
Q  478 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat----ta 573  Q
     |||||||||  ||||| ||| |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    |     
T  24725509 caaaatccatcaattttgattacgatttgacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattattttatt 24725411  T
Q  574 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
           |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||| ||||||||||    
T  24725410 ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgatt 24725316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 4247356 - 4247641
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||||||||  ||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||| ||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||| || ||| |||||||||||||||||||||            
T  4247456 aattcatcgattttgattgcgattttatgatttcttataaactaagtcatttatgactatatatca-tttgtaacatatatttagtattatt-tttttta 4247553  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| || |  | ||||||||||||| || |||||||    
T  4247554 ggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctttgaatttgatt 4247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 381 - 640
Target Start/End: Complemental strand, 44944978 - 44944717
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcac----cttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    ||||||||| |||||||||||||||||||| |||||||    
T  44944978 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaatag 44944879  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
      ||||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       
T  44944878 tcaaaatccatcgattttgattgggattttactatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-tt 44944781  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagt 640  Q
        |||||| || || ||||||||||||||||| |  |||||||||||| |||||||| ||||    
T  44944780 ttttggtaaagtctatcgattttgattgcgattttacaatttcttatatcgattctacaaaagt 44944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 380 - 665
Target Start/End: Original strand, 14055250 - 14055539
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14055250 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14055349  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 574  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14055350 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14055448  T
Q  575 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || |||||||||||||||||||||    
T  14055449 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttg 14055539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 380 - 665
Target Start/End: Original strand, 14365278 - 14365567
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| |||||||  || || |||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||  |    
T  14365278 cattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaataggca 14365377  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta-----ttan 574  Q
    |||||||| |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||     ||      
T  14365378 aaatccatagattttgattgcgattttacgacttcttataaactaagtcatttatgactatatacca-tttataacatatatttaatattatcttttttt 14365476  T
Q  575 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
          ||||||||||||||||||||||||||||||    ||||||||||||  ||||||| |||| || |||||||||||||||||||||    
T  14365477 tttgttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttg 14365567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 382 - 668
Target Start/End: Original strand, 5058530 - 5058813
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||  |||||||  |||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    ||||   |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       |    
T  5058630 atcctacgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatta-ttttttg 5058727  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||| ||||| ||||||||||||||||| |  |||| ||||||| |||| ||| || |  | || |||||||||||||||||||||    
T  5058728 gtaaagtccatcgattttgattgcgattttacaattttttatatcgattc-acaaaattccttgattaaaatccttcgattttgatt 5058813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 27221417 - 27221699
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| |||||||  || ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||  ||||| |  |    
T  27221417 cattgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggca 27221516  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| || ||           
T  27221517 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagttttttt-----tt 27221610  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||| ||||  | |||||| |||||||||| |  ||||| || ||| |||||||| ||||   |||||||||||||||||||||||||    
T  27221611 tggtacaatcagtcgattttaattgcgattttacaatttcctacatcgattctacaaaagtctccgagtaaaatccttcgattttgatt 27221699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 5715290 - 5715570
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||| | |||||||||| ||| |||| ||||||||||| ||||||||   ||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||| ||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | | || ||            
T  5715389 aattcatcgattttgattgtgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatttttttt-----ttt 5715482  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||| ||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  | ||||||||||| ||||||||||||    
T  5715483 ggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgatt 5715570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 409 - 668
Target Start/End: Original strand, 17811375 - 17811633
Alignment:
Q  409 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttac 508  Q
    ||||||||  ||||||| |||||| |||||||||||||||||||||||||||||||||   |||||||| |||||| || |||||| |||||||||||||    
T  17811375 taaaattcttgattttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttac 17811474  T
Q  509 gatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgat 608  Q
    |||||||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| ||||| ||       |||||||||||| |||||||||||||||    
T  17811475 gatttcttataaactaagtcatttataattatatacca-tttataaaatatatttaatattaatattttttgggtaaaatccatcgattttgattgcgat 17811573  T
Q  609 ttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    || |  ||||  |||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  17811574 tttacaattttctatatcgattctacaaaagtccttgagtaaaatctttcgattttgatt 17811633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 381 - 570
Target Start/End: Complemental strand, 24990200 - 24990012
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||| | ||| ||||||| |||||| ||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||||||  ||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 570  Q
    ||||||| |||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||||||    
T  24990100 aatccatcgattttgattgcaattttacgatttcttataaactaaatcatttatgactatatacta-tttataacatatatttagtatta 24990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 380 - 565
Target Start/End: Complemental strand, 26281439 - 26281256
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||   |    
T  26281439 cattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagca 26281340  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttag 565  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  26281339 aaatccatcgatttt-gttgcgatttaacgatttcttataaactaagtcatttatgactatatacca-tttataacttatatttag 26281256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 379 - 530
Target Start/End: Complemental strand, 9685375 - 9685224
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  9685375 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 9685276  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 530  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 9685224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 8330525 - 8330415
Alignment:
Q  19 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8330525 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacagggagagtggtggaagagatcatctataatgacctagaaaacaaaacaactcaga 8330426  T
Q  119 ttttcataatg 129  Q
    |||||||||||    
T  8330425 ttttcataatg 8330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 380 - 665
Target Start/End: Complemental strand, 7730472 - 7730206
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||| ||    
T  7730472 cattgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaa 7730374  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||| |||                  |||||||||||||||||||||| ||           
T  7730373 aaatccatcgattttgattgagattttacgatttcttataaactaaatca------------------tttataacatatatttagtattttttttttgt 7730292  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     ||||||||||||  |||||||||||||||| |  |||||||||||||||| |||| |||| || |||||||| | ||||||||||    
T  7730291 tggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccattcgattttg 7730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 8344288 - 8344183
Alignment:
Q  19 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacaaggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcaga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8344288 gttgtgctatatgccatggaagggaggtaaaagaaagggagcacatggagagtggtggaggagatcatctataatgacctagaaaacaaaacaactcaga 8344189  T
Q  119 ttttca 124  Q
    ||||||    
T  8344188 ttttca 8344183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 451 - 668
Target Start/End: Complemental strand, 20570944 - 20570729
Alignment:
Q  451 aaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccatttt 550  Q
    ||||| |||||||||||  |||||||| ||||||||| |||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||    
T  20570944 aaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacgatttcttataaaataagtcatttatgactatatacca-ttt 20570846  T
Q  551 ataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaa 650  Q
    ||||||||||||||||||||||        |||||| ||||| ||||||||||| ||||| || |||||||||||| |||||||| ||||  | ||||||    
T  20570845 ataacatatatttagtattatt-cttttttggtaaagtccatcgattttgattgtgattttataatttcttatatcgattctacaaaagtccttgagtaa 20570747  T
Q  651 aatccttcgattttgatt 668  Q
    |||| ||| |||||||||    
T  20570746 aatctttcaattttgatt 20570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 381 - 525
Target Start/End: Complemental strand, 22687793 - 22687649
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| | |||||||||||||||  ||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaa 525  Q
    ||||||| |||||| |||||||||||||||||||||| |||||||    
T  22687693 aatccatcgattttgattgcgattttacgatttcttacaaactaa 22687649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 390 - 657
Target Start/End: Original strand, 11324988 - 11325252
Alignment:
Q  390 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 489  Q
    ||||||| ||| |||||||||||||||| ||||||| || |||||||||||||||||||||||||||||| |||||| | |||||||  ||||| |||      
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcata- 11325086  T
Q  490 attttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt---tataacatatatttagtattattannnnnnnggtaaa 586  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||   ||||||||||  ||||| || ||        ||||||    
T  11325087 attttgattgcgaatttacgatttcttataaactaagtcatttatgactatataccaattatttataacatat--ttagttttttt--ttttttggtaaa 11325182  T
Q  587 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatcctt 657  Q
    |||||| |||||||||||  |||| |  ||||| |||||||||| ||||||||| || |||||||| ||||    
T  11325183 atccatcgattttgattgtaattttacaatttc-tatatcaattttacagaagtagttgagtaaaaccctt 11325252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 380 - 519
Target Start/End: Original strand, 39182259 - 39182397
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||||||| |||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  |    
T  39182259 cattgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggca 39182357  T
Q  480 aaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||||| ||||||  |||||||||||| ||||||||||    
T  39182358 aaatccatcgattttggttgcgattttacaatttcttata 39182397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 381 - 519
Target Start/End: Original strand, 11326386 - 11326524
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    ||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||  |||||||  ||    
T  11326386 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggcaa 11326485  T
Q  481 aatccattgattttaattgcgattttacgatttcttata 519  Q
    |||| || |||||| ||||||||||||| ||||| ||||    
T  11326486 aatctatcgattttgattgcgattttacaatttcctata 11326524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 388 - 505
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  388 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccat 487  Q
    ||||||||| ||| |||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  488 tgattttaattgcgattt 505  Q
     |||||| ||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 381 - 665
Target Start/End: Complemental strand, 21846554 - 21846294
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||| | |||| ||  ||    
T  21846554 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggtaa 21846456  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||| || |||||| |||||||                    |||||||| |||||||||||| || ||||||||||||||||| |||||||            
T  21846455 aatcaatcgattttgattgcga--------------------taagtcatttatgactatatatca-tttataacatatatttaatattatt--tatttg 21846379  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||||||  |||||||||| ||||| | ||||||||||||| |||||| | |||| || || ||||||||||||||||||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttg 21846294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 380 - 572
Target Start/End: Complemental strand, 26617606 - 26617415
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc--atagtagaatcccaaa--ata 475  Q
    ||||||| | ||||| ||||| | ||||||||||||||||||||||||||||| |||||||||||||||  |||| |  |||||||||| | |||  |||    
T  26617606 cattgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatata 26617507  T
Q  476 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 572  Q
    |  |||||| || |||||| |||||||||||||||  |||| || |||||||||| |||||||||    || |||||||||||||||||||||||||    
T  26617506 ggcaaaatctatcgattttgattgcgattttacgagatcttgtagactaagtcatttatgactat----ca-tttataacatatatttagtattatt 26617415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 402 - 539
Target Start/End: Complemental strand, 27510051 - 27509914
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 501  Q
    ||||| |||||||  |||||||||||| ||||||||| | |||||| ||||||| ||||||||||   |||||||  ||||| |||  ||||| ||||||    
T  27510051 taaattctaaaataaaggattttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgcg 27509952  T
Q  502 attttacgatttcttataaactaagtcatctatgacta 539  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  27509951 attttacgatttcttataaactaagtcatttatgacta 27509914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 6916786 - 6917063
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||||||||||||||| ||  |||||| | ||||| |||||||||||| ||| || |||||     ||||||||| ||||||||||| | ||||  |  |    
T  6916786 attgttgtcaaaatcccgatttaaatcttgaaatttaggattttgcgattttttttcacct-----gactcaaattcatagtagaattctaaaa--gtta 6916878  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| | |||| |||||||||||||||||||||||||| |||||||| ||||||| ||| |||  |||||||||||||||| || ||||           
T  6916879 aaatccatcggttttgattgcgattttacgatttcttataaattaagtcatttatgact-tattcca-gttataacatatatttaata-tatttttttgt 6916975  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||| ||| |||||||||||| |||| || |||||||||||| ||| ||   |||| || |||||||||||||| |||||||||    
T  6916976 tggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgatt 6917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 582 - 668
Target Start/End: Complemental strand, 8329909 - 8329823
Alignment:
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| |||| || |||||||||||||| |||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgatt 8329823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 582 - 665
Target Start/End: Complemental strand, 8346396 - 8346313
Alignment:
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||| ||||||||||||||||| | | |||||||||||||||||||| | |||| || |||||||||||||||||||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttg 8346313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 421 - 519
Target Start/End: Original strand, 1977692 - 1977790
Alignment:
Q  421 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||   ||||| | | |||||| |||||||||||| |||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgattttaggatttcttata 1977790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 473
Target Start/End: Complemental strand, 21157905 - 21157811
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||||| |||| ||||| |||||| ||||||||||| ||||||||||||  |||| | ||||||||||||||||||| | ||||| ||||    
T  21157905 tcattgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 26565540 - 26565392
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||| |||||| ||||||||||||| | ||||||||||||||| |  ||||||        ||||||||||||  ||||||||||| |||| | ||||    
T  26565540 taaactgagtcatttatgactatatac-agtttataacatatattaac-attatttttgttttggtaaaatccatcaattttgattgcaattttacgatt 26565443  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    | ||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  26565442 ttttatattgattctacaaaagtagttgagtaaaatccttcgattttgatt 26565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 584 - 665
Target Start/End: Original strand, 39182357 - 39182438
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||| ||||||| ||||||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttg 39182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 24989704 - 24989618
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| || ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||    
T  24989704 ggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcct-tagtaaaatccttcgattttgatt 24989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 467
Target Start/End: Complemental strand, 8630091 - 8630001
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 467  Q
    |||||||||||||||||||  ||| ||| ||| |||||  |||||||||| |||||  | | |||||||||||||||||||||||||||||    
T  8630091 aatcattgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

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Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 381 - 476
Target Start/End: Original strand, 30294175 - 30294267
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    ||||||||||||||||  || ||||||||||||| |||||||||| || ||| ||||||||   |||||||||||||||| | |||| ||||||||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaatag 30294267  T

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Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 26565758 - 26565663
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    ||||||||||||||| ||| | |||||| |||||||||| ||||||  ||||| ||||| || ||||| |||||| ||||| |||||| |||||||    
T  26565758 cattgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

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Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 30294444 - 30294531
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| || |||||||| ||||| | |||||||| |||| |||||| | |||| ||  |||||||||||||||||||||||    
T  30294444 ggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatccttcgattttgatt 30294531  T

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Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 454
Target Start/End: Original strand, 4574475 - 4574544
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 454  Q
    |||| |||||| |||| ||||||||||||| ||| |||||||||||||  ||||||||||||| ||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacgattcaaat 4574544  T

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Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 8572336 - 8572422
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||||||||||||||| |||| || ||||| ||||||||||||||| | ||  | || ||| ||| |||||||||||||    
T  8572336 ggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgatt 8572422  T

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Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 548 - 664
Target Start/End: Complemental strand, 27509374 - 27509260
Alignment:
Q  548 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 647  Q
    |||||||||||||||||||||||||        ||||||||| || || ||| |||||||||| |  |||||||||||| |||||| | |||| || |||    
T  27509374 tttataacatatatttagtattatt--ttttttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgag 27509277  T
Q  648 taaaatccttcgatttt 664  Q
    ||||||||||| |||||    
T  27509276 taaaatccttcaatttt 27509260  T

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Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 8329907 - 8329867
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  8329907 aaaatcctttgattttgattgcgattttacgatttcttata 8329867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 668
Target Start/End: Original strand, 8304324 - 8304371
Alignment:
Q  621 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||||| ||||  | ||||||||||||||||||||||||    
T  8304324 tatatcaattctacaaaagtccttgagtaaaatccttcgattttgatt 8304371  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 8346394 - 8346354
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||| |||||||| |||||||| |||||||||||||||    
T  8346394 aaaatcctttgattttgattgcgatattacgatttcttata 8346354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 9685275 - 9685235
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  9685275 aaaatccatcgattttaattgcgattttatgatttcttata 9685235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 9e-81; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 380 - 665
Target Start/End: Complemental strand, 5362093 - 5361812
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||  |    
T  5362093 cattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggca 5361994  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    ||| |||| |||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||           
T  5361993 aaacccatcgattttgattgagattttacgatttcttataaactaagtcatttatgattatataccatttt-taacatatatttagtattttt---cttt 5361898  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     ||| |||||||| || |||||||||||||| | |||||| |||||| |||||||| |||| || |||||||| ||||||||||||    
T  5361897 tggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttg 5361812  T

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Target: chr4; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 403 - 664
Target Start/End: Complemental strand, 9911518 - 9911259
Alignment:
Q  403 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 502  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |  |||||||||||||||||| ||||| |  ||||||||| |||||| |||||||    
T  9911518 aaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggcaaaatccatcgattttgattgcga 9911419  T
Q  503 ttttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgat 602  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||       |||||| ||||| |||||||||    
T  9911418 ttttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaagtattatta-ttttttggtaaagtccatcgattttgat 9911321  T
Q  603 tgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 664  Q
    |||||||| |  |||||||||||| |||||||| ||||  ||||||||||||||||| ||||    
T  9911320 tgcgattttacaatttcttatatcgattctacaaaagttctcgagtaaaatccttcgttttt 9911259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 383 - 668
Target Start/End: Original strand, 5375666 - 5375950
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    ||||||||||||||  |||||||| |||||||| | ||||||||||||||||||||||||||||||| |||| |||| ||||||   |||||||| ||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  483 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 582  Q
    | ||| || ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||||||| |        ||    
T  5375766 ttcatcgactttgattgcgattttacgatttcttataaactaagtcatttatgaccatatatca-tttataacatatatttagtattaattttttttggg 5375864  T
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||| ||||||||||| ||||| |  ||||| |||||  |||||||||||||  | ||||||||||||||||||||||||    
T  5375865 taaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatccttcgattttgatt 5375950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 380 - 570
Target Start/End: Original strand, 13023566 - 13023758
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaa-ttcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatccc--aaaatag 476  Q
    |||||||||||||||||  || |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  13023566 cattgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaatag 13023665  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta 570  Q
    | |||||| || |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  13023666 ataaaatcaatcgattttgattgcgattttacgattttttataaactaagtcatttatgactatatacca-tttataacatatatttagtatta 13023758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 668
Target Start/End: Original strand, 10142897 - 10143185
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||| ||||||| ||| ||||| |||||||| |  ||||||||||||||| ||||||||| ||||||| ||||||||| ||| ||||||||||     
T  10142897 tcattgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagac 10142996  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 578  Q
    ||||||||| |||||| |||| |||||||||||||||||||||  ||||||| |||||||||||||||  |||||| |||||||||||||||||          
T  10142997 aaaatccatcgattttgattgtgattttacgatttcttataaatcaagtcatttatgactatatacca-attataatatatatttagtattatttttttt 10143095  T
Q  579 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
      | ||||||||||  |||||||||||||||| |  || ||||||||| |||||||| || | || || |||||||||||||||||||||    
T  10143096 ttgataaaatccatcaattttgattgcgattttacaatctcttatatcgattctacaaaattagttgaataaaatccttcgattttgatt 10143185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 9770112 - 9770397
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||| ||||||  ||| ||||| |||||||  ||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  9770112 attgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagacaa 9770211  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||| ||  ||||| |||||||||||||||||||||||||||||||| |  ||||||||||||||| || |||||||||||||||||||| |            
T  9770212 aatctatcaattttgattgcgattttacgatttcttataaactaagttacttatgactatatacca-ttcataacatatatttagtattaat-ttttttg 9770309  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| |||   | ||||||||||||||||||||||||    
T  9770310 ggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattctacaaaagaccttgagtaaaatccttcgattttgatt 9770397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 36120823 - 36121108
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||| | ||  |||||  ||||||| |||||||||||| |||||||||||||||||||| ||||||||| || ||| | ||||||   |    
T  36120823 cattgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagca 36120922  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||| ||| |||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||          
T  36120923 aaattcatcgattttgattgcgattttacgatttcttatatactaagtcatttatgactatatacca-tttataaaatatatttagtattatta--tttt 36121019  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| || ||||| ||||  | |||||||||| |||||||||||||    
T  36121020 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgatactacaaaagtccttgagtaaaatctttcgattttgatt 36121108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 8889227 - 8889415
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||| || |||||||||| |||||||||||||| |||| ||||||||||||||||  |    
T  8889227 cattgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggca 8889326  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  8889327 aaattcatcgattttgattgcgattttacgatttcttataaaccaagtcgtttatgactatatacca-tttataatatatatttagtatt 8889415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 382 - 665
Target Start/End: Original strand, 17466080 - 17466361
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||| |  || |||||| ||||||| |||||||||||| |||||||| ||| || |||||||||||||| |||||||| ||||||   |||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    |||||| |||||  |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||             
T  17466180 atccatcgatttagattgcgattttacgatttctaataaactaagtcatttatgactatatacca-tttataacatatatttaatattatt-tttttgtt 17466277  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||||| |||||||||||| |||| |  |||||||||||| |||| ||| |||| || ||||| |||| ||| ||||||    
T  17466278 gtaaaatccatcgattttgattgcaattttacaatttcttatatcgattccacaaaagtagttgagtataatctttcaattttg 17466361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 379 - 530
Target Start/End: Complemental strand, 13551753 - 13551602
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||  ||| || ||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||  |||||||||     
T  13551753 tcattgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagac 13551654  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 530  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttataaactaagtcat 13551602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 379 - 668
Target Start/End: Complemental strand, 23065094 - 23064805
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||| |||| || ||| ||||| ||||||| ||| ||||||  ||||||||||| ||||||||||||||||||| ||||||| | |||||||      
T  23065094 tcattgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggt 23064995  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaac--taagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
     |||||||| |||||||||||| |||||||||||||||||||||  |||||||| ||||||  |||| || ||||||||||||||||||||||||||       
T  23064994 caaatccatcgattttaattgcaattttacgatttcttataaactataagtcatttatgaccctatatca-tttataacatatatttagtattatta-tt 23064897  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||||  | |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | || ||||||||||| |||||||||    
T  23064896 ttttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatccttcaattttgatt 23064805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 380 - 573
Target Start/End: Original strand, 37240261 - 37240448
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| |||||||  || |||||||||||||| ||    || ||||||| |||||||||||||||||||||||||||||||| ||||||||||  |    
T  37240261 cattgttgttaaaatccctacttaaatcctaaaatttag----ttacgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggca 37240355  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 573  Q
     ||| ||| |||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||||    
T  37240356 taattcatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactctatacca-tttatatcatatatttagtattatta 37240448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 381 - 514
Target Start/End: Complemental strand, 8011345 - 8011212
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  481 aatccattgattttaattgcgattttacgatttc 514  Q
    ||| ||| |||||| ||||||||||| |||||||    
T  8011245 aattcatcgattttgattgcgattttgcgatttc 8011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 7044728 - 7044821
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    ||||||||||||||| ||| ||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaata 7044821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 377 - 474
Target Start/End: Original strand, 24719513 - 24719610
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaat 474  Q
    |||||||||||||||||||  ||| ||| | |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  24719513 aatcattgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 18459838 - 18459733
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| ||||||| |||  |||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||| ||||||| |||||||  |    
T  18459838 cattgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggca 18459739  T
Q  480 aaatcc 485  Q
    ||||||    
T  18459738 aaatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 532 - 668
Target Start/End: Original strand, 24719725 - 24719860
Alignment:
Q  532 tatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattc 631  Q
    ||||||||||||| |||| ||||||||||||||  ||||||        |||||||  ||| ||||||||||||||||| | ||||||||||||| ||||    
T  24719725 tatgactatatacaattt-ataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattc 24719823  T
Q  632 tacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||| ||||  |||||||||||||||||||| |||||    
T  24719824 tacaaaagtaatcgagtaaaatccttcgattgtgatt 24719860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 4156763 - 4156857
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    |||||||||||||||| ||| |||||| ||||||| ||||||||  |||||| |||||||| |||||||||||||  ||||||||||| ||||||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaata 4156857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 8011129 - 8010980
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||||| |||| ||| | ||||||| |||| ||||||||||||||| ||||||        |||||||| ||| ||||||||||||||||| |  |||    
T  8011129 taaactaattcatttataattatatacaattt-ataacatatatttagcattatttttgttttggtaaaatacatcgattttgattgcgattttacaatt 8011031  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||| | || | || ||||||||||||||||||||||||    
T  8011030 tcttatatcgattctataaaaatagttgagtaaaatccttcgattttgatt 8010980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 484  Q
    |||| ||||||| ||| ||||||||||||| ||| |||||| |||||| |||| ||| | ||||||||| ||||||||||||||||||||||  ||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  485 c 485  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 585 - 668
Target Start/End: Complemental strand, 6346882 - 6346799
Alignment:
Q  585 aaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||| ||||||||||||||||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  6346882 aaatccatcgattttgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgatt 6346799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 379 - 486
Target Start/End: Complemental strand, 6347195 - 6347088
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    ||||| |||||||||| |  || ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||||  || || ||||||||      
T  6347195 tcattattgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggt 6347096  T
Q  479 aaaatcca 486  Q
    ||||||||    
T  6347095 aaaatcca 6347088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 461
Target Start/End: Original strand, 7452418 - 7452499
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagt 461  Q
    |||||||||| ||||||| ||| ||||| ||||||| ||| ||||||| ||||| ||||||||||||||||| ||||||||||    
T  7452418 tcattgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgactc-aatccatagt 7452499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 7044961 - 7045048
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| |||||||||||  |||| | ||||||||||||| ||| | || |||| || |||||||||| |||||||||||||    
T  7044961 ggtaaaatccatcgattttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgatt 7045048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 525 - 668
Target Start/End: Complemental strand, 9149709 - 9149566
Alignment:
Q  525 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttg-atgatttcttat 623  Q
    |||||| ||| ||||||||| |||| ||||||||||||||| ||||||        ||||||||| ||  |||||||||||| |||  | ||||||||||    
T  9149709 agtcatttataactatatacaattt-ataacatatatttagcattatttttcttttggtaaaatctatcaattttgattgcgttttttacgatttcttat 9149611  T
Q  624 atcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||| |||||||  |||| || |||||||||||||| |||||||||    
T  9149610 atcgattctacgaaagtagttgagtaaaatccttcaattttgatt 9149566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 595 - 668
Target Start/End: Original strand, 37240450 - 37240524
Alignment:
Q  595 attttgattgcgatttgatgatttctt-atatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||| ||||| | |||||||| ||||| |||||||| |||| || ||||||||||||||||||||||||    
T  37240450 attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgatt 37240524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 454
Target Start/End: Complemental strand, 9149864 - 9149791
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 454  Q
    ||||| |||||||||| ||| |||||||||||||| |||||||||||||||| |  |||||||| || ||||||    
T  9149864 attgtggtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttatctaccttcaaagaatcaaat 9149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 618 - 668
Target Start/End: Original strand, 55476223 - 55476273
Alignment:
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  55476223 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 55476273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 516
Target Start/End: Original strand, 4157053 - 4157090
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttctt 516  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacgatttctt 4157090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 445 - 485
Target Start/End: Original strand, 7803070 - 7803110
Alignment:
Q  445 cgactcaaatccatagtagaatcccaaaatagaaaaaatcc 485  Q
    ||||||||| |||||| |||||||||||||||| |||||||    
T  7803070 cgactcaaacccatagcagaatcccaaaatagacaaaatcc 7803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 13551653 - 13551613
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||| |||||| |||||||||| |||||||||||||    
T  13551653 aaaatccatcgattttaattgcgattttatgatttcttata 13551613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 453
Target Start/End: Original strand, 18327339 - 18327415
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 453  Q
    |||||||||||||||||||  ||  ||| ||  |||||| ||||||||||||||||  | | |||||||||||||||    
T  18327339 aatcattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18327415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 18438058 - 18437982
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaa 453  Q
    |||||||||||||||||||  ||  ||| ||  |||||| ||||||||||||||||  | | |||||||||||||||    
T  18438058 aatcattgttgtcaaaatcacgaattaagtctcaaaatttaggattttgcgactttacttagcttcaacgactcaaa 18437982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 46664465 - 46664421
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacg 446  Q
    |||||| |||||||||| ||||||||||||| |||| ||||||||    
T  46664465 taaatcttaaaattcagaattttgcgactttgttcatcttcaacg 46664421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 6e-79; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 377 - 668
Target Start/End: Original strand, 11879596 - 11879885
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11879596 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11879695  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11879696 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11879793  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||    
T  11879794 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgatt 11879885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 377 - 668
Target Start/End: Original strand, 11897012 - 11897301
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  11897012 aatcattgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaatag 11897111  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
     |||||| ||| |||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||       
T  11897112 gaaaaattcatcgattttgattgcgattttacgatttcttataaactaagtaatttatgactatatacca-tttataacatatatttagtattatta-tt 11897209  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||||||| |||||||| |||||||| |  ||||  |||||| |||||| | ||||  |   ||||||||||||||||||||||    
T  11897210 ttttggtaaaatccatcgattttgaatgcgattttacaattttctatatcgattctataaaagttcttaggtaaaatccttcgattttgatt 11897301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 378 - 668
Target Start/End: Original strand, 15294667 - 15294954
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15294667 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15294766  T
Q  478 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 577  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15294767 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15294863  T
Q  578 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | ||||||||||||||||||||||||    
T  15294864 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgatt 15294954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 378 - 668
Target Start/End: Original strand, 15475036 - 15475323
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||| |||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||     
T  15475036 atcaatgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaatagg 15475135  T
Q  478 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 577  Q
     ||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||||||| || | ||| |||||||||||||||||||||         
T  15475136 caaaatccatcgattttgattgcgattttacaatttcttataaactaagtcatttatgactatacacta-tttgtaacatatatttagtattatt--ttt 15475232  T
Q  578 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
       |||||||||||| ||||||| ||||||||| | ||||||||||||  |||||||| ||||  | ||||||||||||||||||||||||    
T  15475233 ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatccttcgattttgatt 15475323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 5922048 - 5922333
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| |    
T  5922048 cattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagaca 5922147  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| ||||||||||| |||||||||||||| || ||||| ||||||||||||||| || ||||||||||||||||||||  |          
T  5922148 aaatccatcgattttgattgcgattttgcgatttcttataaattaggtcatttatgactatatacca-ttcataacatatatttagtatta-aatttttt 5922245  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| || || ||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  5922246 gggtaaaatccatcga-ttagattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 5922333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 380 - 569
Target Start/End: Original strand, 31424162 - 31424350
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||||||||||  |    
T  31424162 cattattgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggca 31424261  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||  |||||||||||||||||||||    
T  31424262 aaatccattgattttgattgcgattttacgatttcttataaactaagtcgtttatgactatatacca-attataacatatatttagtatt 31424350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 377 - 665
Target Start/End: Complemental strand, 29384449 - 29384159
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||| ||||||||||||||| |   |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  29384449 aatcgttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaatag 29384350  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatta----tt 572  Q
      ||||| ||| || ||| ||||||||||||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||||||||    ||    
T  29384349 gcaaaattcatcga-tttgattgcgattttacgatttcttataaaacaattcatttatgactatatacca-tttataacatatatttagtattagtattt 29384252  T
Q  573 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
            |||||||||||| ||||||||||||||||| | |||||||||||| ||||||||| |||| || |||||||||||||||||||||    
T  29384251 ttttttttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttg 29384159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 17646993 - 17647282
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  17646993 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaataggaaa 17647092  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattatta-nnnn 577  Q
    ||| ||| |||||| ||||  |||| ||||||||||||||||  |||||  | | | | ||||||||| ||| ||| ||||||||| | ||||||         
T  17647093 aattcatcgattttgattgttatttaacgatttcttataaacctagtcattttttttattatatacca-tttgtaaaatatatttaatgttattattttt 17647191  T
Q  578 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
       | |||||||||| ||||||||||||||||| |  |||||||||||| |||||||| || | || ||||||||||||||||||||||||    
T  17647192 tttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgatt 17647282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 45403029 - 45403314
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||  ||| ||||| ||||||| || ||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||||   ||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||||||| |||||| ||||||||||||||||| ||||| ||| ||||||| |||||  |||||||| ||||||||||||||||| ||||||||           
T  45403129 aatccatcgattttgattgcgattttacgattccttatcaaccaagtcatttatgataatatacca-tttataacatatatttaatattattattttttt 45403227  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| || ||||||||||||| ||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||||    
T  45403228 ggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatccttcgattttgatt 45403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 668
Target Start/End: Complemental strand, 19704583 - 19704301
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattca-ggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||||  || |||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    |||||| |||||| ||||| ||||||||||||||||||||| |||| || ||||||||||||||| ||| ||||||||||||||| || ||        |    
T  19704483 atccatcgattttgattgcaattttacgatttcttataaaccaagttatttatgactatatacca-tttgtaacatatatttagttttttt---ttttag 19704388  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||| ||||||||||| ||||| | ||||||  ||||| ||||||||  |||  | ||||||| ||||| ||||||||||    
T  19704387 gtaaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgatt 19704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 430 - 663
Target Start/End: Original strand, 23142224 - 23142454
Alignment:
Q  430 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 529  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| |||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtca 23142323  T
Q  530 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 629  Q
    | ||||||||||||||| ||||||||||||||||||||||||||       |||||| ||||| ||||||||||||||||| |  |||||||||||| ||    
T  23142324 tttatgactatatacca-tttataacatatatttagtattatta--tttttggtaaagtccatcgattttgattgcgattttacaatttcttatatcgat 23142420  T
Q  630 tctacagaagtggtcgagtaaaatccttcgattt 663  Q
    |||||| ||||  | || ||||||| ||||||||    
T  23142421 tctacaaaagtttttgactaaaatcattcgattt 23142454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 376 - 567
Target Start/End: Complemental strand, 22910336 - 22910146
Alignment:
Q  376 aaatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    ||||||||| ||| || |||| ||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||||||||  ||||||    
T  22910336 aaatcattgatgtaaacatcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaata 22910237  T
Q  476 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagta 567  Q
    |  |||||||||||||||| |||||||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||||| ||||||    
T  22910236 ggcaaaatccattgattttgattgcgattttaagatttcttataaattaagtaatttatgactatatacca-tttataacatatacttagta 22910146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 420 - 665
Target Start/End: Original strand, 6810861 - 6811101
Alignment:
Q  420 attttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||  ||||| ||| |||||| ||| ||||||||||||||| ||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacgatttcatata 6810959  T
Q  520 aactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttc 619  Q
    ||||||||||| ||| |||||||| || |||||||||||||||||||||||||        |||||||||||| |||||||||||||||||    |||||    
T  6810960 aactaagtcatttataactatatatca-tttataacatatatttagtattatt--ttttttggtaaaatccatcgattttgattgcgattt-tcaatttc 6811055  T
Q  620 ttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||| |||||||| |||| || || |||||| |||||||||||    
T  6811056 ttatatctattctacaaaagtagttgattaaaattcttcgattttg 6811101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 385 - 569
Target Start/End: Complemental strand, 3094378 - 3094185
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 484  Q
    ||||||||||   ||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  485 cattgattttaattgcgattttacgatttct----------tataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    ||| |||||| |||||||||||||||||| |          ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacgattttttttttttttatataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 3094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 380 - 569
Target Start/End: Complemental strand, 27836594 - 27836406
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||| |  || || |||||||||||||||||||||||  ||| |||||||||||| ||| |||||||||||||||| | ||||||   |    
T  27836594 cattgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagca 27836495  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    |||| |||  ||||| ||| | ||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  27836494 aaattcatcaattttgattacaattttacaatttcttataaactaagtcatttatgactatatacca-tttataacatgtatttagtatt 27836406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 377 - 668
Target Start/End: Complemental strand, 7489417 - 7489127
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc----caaa 472  Q
    ||||||| ||||||||||||  |  |||||| |||||| ||| |||||||   |||||||||||||||||||| |||||| ||||||||| |     |||    
T  7489417 aatcattattgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaa 7489321  T
Q  473 atagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 572  Q
    ||||| |||||  || |||||| ||||| |||||| ||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||| |    
T  7489320 atagacaaaatttatcgattttgattgcaattttatgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattaat 7489222  T
Q  573 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |        ||||||| ||| ||||||||||||||||| |  ||||  |||||| |||||||| ||||  | |||||||||||| |||||||||||    
T  7489221 atttttga-gtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatcctccgattttgatt 7489127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 402 - 664
Target Start/End: Original strand, 32424356 - 32424615
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 501  Q
    ||||| |||||||| ||||||||  |||||| ||||   | ||||| |||||| ||||||||||||| |||||||| |||||  || |||||| ||||||    
T  32424356 taaattctaaaatttaggattttatgacttttttca---ttaacgattcaaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcg 32424452  T
Q  502 attttacgatttcttataaactaagtcatctatgactatataccattttataac--atatatttagtattattannnnnnnggtaaaatccattgatttt 599  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||||  ||||||||||||||| |        | ||||||| || ||||||    
T  32424453 attttacgatttattatatactaagtcatttatgactatatacca-tttataacatatatatttagtattaat-ttttctggataaaatctatcgatttt 32424550  T
Q  600 gattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 664  Q
     |||||||||| |  ||||| ||| || |||||||| || |  | ||||||||||||||||||||    
T  32424551 tattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgatttt 32424615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 380 - 484
Target Start/End: Complemental strand, 24056698 - 24056594
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||| |||||||| |||| ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||   |||||||||||||| |    
T  24056698 cattgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagaca 24056599  T
Q  480 aaatc 484  Q
    |||||    
T  24056598 aaatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 385 - 571
Target Start/End: Complemental strand, 6292467 - 6292282
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 484  Q
    |||| ||||| | ||| |||||| ||||||| | ||||||| |||||| |||| ||| ||||||||||| |||||||| ||| | ||||||  ||||||     
T  6292467 ttgttaaaataccgacttaaatcttaaaatttaagattttgtgacttttttcatctttaacgactcaaacccatagtataattctaaaataagaaaaatt 6292368  T
Q  485 cattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 571  Q
    ||  |||||| |||||| | |||| |||| |||||| ||||||||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  6292367 caacgattttgattgcggtcttacaatttattataatctaagtcatttatcactatatacca-tttataaaatatatttaatattat 6292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 380 - 456
Target Start/End: Complemental strand, 477177 - 477101
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 456  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||| ||||||    
T  477177 cattgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 564
Target Start/End: Complemental strand, 9212295 - 9212202
Alignment:
Q  470 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta 564  Q
    ||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||||| ||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgattttaagatttcttataaactaaatcatttatgaccatatacca-tttataacctatattta 9212202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 15761569 - 15761473
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    ||||||||||||||||  ||| ||||||||||| | |||||||||| || ||| || |||||||||||||||||| ||||| | |||||||||||||    
T  15761569 cattgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaatag 15761473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 548 - 663
Target Start/End: Complemental strand, 15761322 - 15761207
Alignment:
Q  548 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 647  Q
    |||||||||||||||||| ||||||        |||||||||||| ||||||||||||||||| |  | |||||||||| |||||||| ||||  | |||    
T  15761322 tttataacatatatttagcattatttttgttttggtaaaatccatcgattttgattgcgattttactacttcttatatcgattctacaaaagtaattgag 15761223  T
Q  648 taaaatccttcgattt 663  Q
    ||||||||||||||||    
T  15761222 taaaatccttcgattt 15761207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 581 - 654
Target Start/End: Original strand, 8582241 - 8582314
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatc 654  Q
    |||||||| ||| |||||||||||  |||| | |||||||||||||||||||||| |||| || ||||||||||    
T  8582241 ggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatc 8582314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 382 - 426
Target Start/End: Complemental strand, 9036801 - 9036757
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 426  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  9036801 ttgttgtcaaaaacctgacttaaatcctaaaattcaggattttgc 9036757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 23136348 - 23136396
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcga 428  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  23136348 cattattgtcaaaatcccgacttaaatcctaaaattcaggattttgcga 23136396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 668
Target Start/End: Original strand, 17566313 - 17566383
Alignment:
Q  598 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| ||||||||||||||    
T  17566313 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgatt 17566383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 519
Target Start/End: Original strand, 15231745 - 15231862
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 501  Q
    ||||||||||| || | ||||||||||  ||||||||||||||||||| |||| |||| || ||||  |||||||  ||||||||     ||| ||||||    
T  15231745 taaatcctaaactttaagattttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcg 15231844  T
Q  502 attttacgatttcttata 519  Q
    ||||||| |||| |||||    
T  15231845 attttacaattttttata 15231862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 668
Target Start/End: Complemental strand, 24056499 - 24056414
Alignment:
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||| || |||| |||||||||||| |  |||| ||||||  |||||||| || | || ||||||||||||||||||||||||    
T  24056499 taaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttcgattttgatt 24056414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 22910233 - 22910193
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  22910233 aaaatccattgattttgattgcgattttaagatttcttata 22910193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 584 - 624
Target Start/End: Original strand, 31424261 - 31424301
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  31424261 aaaatccattgattttgattgcgattttacgatttcttata 31424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 663
Target Start/End: Complemental strand, 22910118 - 22910052
Alignment:
Q  597 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 663  Q
    |||||||||||||| | ||||||||||||| |||||||| || | || || ||||||||||| ||||    
T  22910118 tttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaattt 22910052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 582 - 668
Target Start/End: Complemental strand, 24414217 - 24414131
Alignment:
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||| |||||| |||||||  ||||| |  ||||| |||||| |||||||| || |  | ||||||||||||||||||||||||    
T  24414217 gtaaaattcattgaatttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgatt 24414131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 9212286 - 9212246
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9212286 aaaatccatcgattttgattgcgattttaagatttcttata 9212246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 150; Significance: 6e-79; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 43234868 - 43235153
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||    
T  43234868 attgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaaa 43234967  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||||||| |||||| |||| |||||||||||||||||| ||||||||||| |||| ||||| |||| ||||||||||||| ||| ||||||||           
T  43234968 aatccatcgattttgattgtgattttacgatttcttatcaactaagtcatttatgtctataaacca-tttataacatatacttactattatta-tctttt 43235065  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| || ||||||||||||||||| |  |||| ||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  43235066 ggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 43235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 382 - 668
Target Start/End: Original strand, 18843716 - 18844000
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||| ||||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    || ||| |||||| ||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| |        |    
T  18843816 attcatcgattttgattgcaattatacgatttcttataaactaagtcatttatgattatatacca-tttataacatatatttagtattaat-ttttttgg 18843913  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||| ||||||||||||||||| |  ||||| |||||  |||||||| ||||  | ||||||||| || |||||||||||    
T  18843914 gtaaaatccatcgattttgattgcgattttacaatttcctatatggattctacaaaagtccttgagtaaaatactccgattttgatt 18844000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 19578941 - 19579228
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||| |  || |||||| |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||   |    
T  19578941 cattgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagca 19579040  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||| ||||||||           
T  19579041 aaatccatcgattttgattgcgactttacgatttcttataaactaagtcatttatgactatttacca-ttcataacatatatttggtattattttttttt 19579139  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| ||||||||||||||||| |  ||||  |||| | |||||||| ||||  | |||| |||||||||||||||||||    
T  19579140 tggtaaaatccatcgattttgattgcgattttacaattttctataacgattctacaaaagtccttgagtgaaatccttcgattttgatt 19579228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 380 - 665
Target Start/End: Complemental strand, 21059285 - 21059003
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||  |||||||||||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||  |    
T  21059285 cattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggca 21059187  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||| ||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||| ||           
T  21059186 aaattcatcgattttgattgcgattttacgatttcttataaacgaagtcatttatgactataaacca-tttataacatatatttagtattttt--ttttg 21059090  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagt-aaaatccttcgattttg 665  Q
      ||||||||||| ||||||||||||||||| || ||||||||||| ||||||||| |||| ||  ||| |||||| ||||||||||    
T  21059089 ttgtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaaaatctttcgattttg 21059003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 382 - 668
Target Start/End: Complemental strand, 23172560 - 23172272
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  482 ----atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnn 577  Q
        ||| || |||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||||||||| ||||| |         
T  23172460 attcatcgatcgattttgatcgcgattttacgattttttataaactaagtcatttatgactatatacca-tttgtaacatatatttaatattaat-tttt 23172363  T
Q  578 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
       |||||||| ||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  23172362 ttgggtaaaattcatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaattcttcgattttgatt 23172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 377 - 640
Target Start/End: Complemental strand, 18051663 - 18051405
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||| | |||||||    
T  18051663 aatcattgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaatag 18051564  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
      ||||||||| |||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||   | ||||||||||||||||||||||||||       
T  18051563 gcaaaatccatcgattttgattgcgattgtacgatttcttataaactaagtcatttatgac-atat---aatttataacatatatttagtattatta-tt 18051469  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagt 640  Q
        ||| |||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||    
T  18051468 ttttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagt 18051405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 389 - 668
Target Start/End: Complemental strand, 27340307 - 27340031
Alignment:
Q  389 caaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccatt 488  Q
    |||||||| ||| |||||| ||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||  ||||| |||     
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  489 gattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta--nnnnnnnggtaaa 586  Q
    |||||| |||| |||||||  |||||||||||||||||||||     ||||||||||||||  ||||||||||||||||||||||          |||||    
T  27340207 gattttgattgagattttaatatttcttataaactaagtcatt----actatataccatttg-taacatatatttagtattattattatttttttgtaaa 27340113  T
Q  587 atccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||| || ||||||||||||||||| |  ||||||||||||||||||||| ||||    ||||||||||||||||||||||||    
T  27340112 atctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgatt 27340031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 381 - 665
Target Start/End: Complemental strand, 38158383 - 38158111
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||| | ||| |||||||||||||  ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||| ||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||||||||||||||  |||  |||||||||||||||||||||||| |||| ||||||||          |||||||||||||||||||||||            
T  38158283 aatccattgattttggttgttattttacgatttcttataaactaaatcatttatgacta----------tataacatatatttagtattatt--tttttt 38158196  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||||||  |||||||||| ||||| |  |||||||| ||  |||||||| || | || |||||||||||||||||||||    
T  38158195 ggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatccttcgattttg 38158111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 380 - 547
Target Start/End: Complemental strand, 22645849 - 22645681
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||   |    
T  22645849 cattgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagta 22645750  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaa-gtcatctatgactatataccat 547  Q
    || |||||  ||||| ||||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  22645749 aattccatctattttgattgcgattttacaatttcttataaactaatgtcatttatgactatataccat 22645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 402 - 665
Target Start/End: Complemental strand, 41688772 - 41688513
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 501  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||||| ||||  |||||| ||| | ||||||   ||||| ||| |||||| ||||||    
T  41688772 taaatcctaaaattc-ggattttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgattgcg 41688674  T
Q  502 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttga 601  Q
    |||||||||||||||||||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||        |||||||| ||| ||||||||    
T  41688673 attttacgatttcttataaactaaatcatttataactatatacca-ttcataacatatatttagtattatt--ttttttggtaaaattcatcgattttga 41688577  T
Q  602 ttgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||| |  ||||  |||||| |||||||| ||||  |  ||||||||||||||||||||    
T  41688576 ttgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatccttcgattttg 41688513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 430 - 573
Target Start/End: Original strand, 19979648 - 19979790
Alignment:
Q  430 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 529  Q
    |||||||| |||||||||||||||| ||| |||||||||||||| |   ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacgatttcttataaactaagtca 19979747  T
Q  530 tctatgactatataccattttataacatatatttagtattatta 573  Q
    | ||||||||||||||| ||||||||||||||||| ||||||||    
T  19979748 tttatgactatatacca-tttataacatatatttattattatta 19979790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 430 - 668
Target Start/End: Original strand, 20320992 - 20321228
Alignment:
Q  430 tttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtca 529  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||  | ||| ||||||||||||||| ||||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga-ttcttataaactaagtca 20321090  T
Q  530 tctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaat 629  Q
    | |||||| ||||| || ||||||||||||||||| ||||| |        |||||||||||| ||||||||||||||||| |  ||||| |||||  ||    
T  20321091 tttatgaccatatatca-tttataacatatatttaatattaattttttctgggtaaaatccatcgattttgattgcgattttacaatttcctatatagat 20321189  T
Q  630 tctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||| ||||  |  ||||||||||||| |||||||||    
T  20321190 tctacaaaagtccttcagtaaaatccttcaattttgatt 20321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 381 - 506
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||  ||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  481 aatccattgattttaattgcgatttt 506  Q
    | ||||| |||||| |||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 385 - 454
Target Start/End: Original strand, 24106645 - 24106714
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaat 454  Q
    |||||||||||||||  |||||| |||||||||||||||||| ||||||||||||  |||||||||||||    
T  24106645 ttgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatc 455  Q
    ||||||||||||||  || ||||| |||||||| | ||||||| |||||||||||||||||||||||||||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 20320926 - 20320990
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 447  Q
    ||||||||||||||  ||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  20320926 tgttgtcaaaatcccaacctaaatcctaaaatttaagattttgcaactttcttcaccttcaacga 20320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 525 - 668
Target Start/End: Original strand, 26021464 - 26021604
Alignment:
Q  525 agtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    |||||| ||||||||||||| |||| ||||||||||||||| |||||||       |||||||| ||| |  ||| |||| ||||| | |||||||||||    
T  26021464 agtcatttatgactatatacaattt-ataacatatatttagcattattattgttttggtaaaatgcatcg--tttaattgtgattttacgatttcttata 26021560  T
Q  625 tcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    || ||  |||| |||| || |||||||||||| |||||||||||    
T  26021561 tcgatgttacacaagtagttgagtaaaatcctacgattttgatt 26021604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 668
Target Start/End: Original strand, 41427657 - 41427704
Alignment:
Q  621 tatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||| |||||||| ||||  ||||||||||||||||||||||||||    
T  41427657 tatatcgattctacaaaagtcctcgagtaaaatccttcgattttgatt 41427704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 480 - 522
Target Start/End: Complemental strand, 19042448 - 19042406
Alignment:
Q  480 aaatccattgattttaattgcgattttacgatttcttataaac 522  Q
    ||||| || |||||| |||||||||||||||||||||||||||    
T  19042448 aaatctatcgattttgattgcgattttacgatttcttataaac 19042406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 618 - 668
Target Start/End: Original strand, 19377838 - 19377888
Alignment:
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  19377838 tcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 19377888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 481 - 519
Target Start/End: Complemental strand, 43005785 - 43005747
Alignment:
Q  481 aatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||| |||||||||||||||||||||||||| ||||    
T  43005785 aatccatcgattttaattgcgattttacgatttcctata 43005747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Original strand, 19979697 - 19979737
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  19979697 aaaatccatggattttgattgcgattttacgatttcttata 19979737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 6e-79; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 381 - 668
Target Start/End: Original strand, 23528656 - 23528941
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    ||||||||||||||||  || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||| || |||||| | ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||| ||||||||           
T  23528756 aatctatcgattttgaatgcgattttacgatttcttataaacgaagtcatttatgactatatacca-tttataacgtatatttattattatta-ttattg 23528853  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  23528854 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 23528941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 377 - 668
Target Start/End: Complemental strand, 16125591 - 16125299
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt---caccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||||||  |||||||||||| ||||  ||||    
T  16125591 aatcattattttcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaa 16125492  T
Q  474 tagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 573  Q
    |||  |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||    
T  16125491 taggcaaaatccattgattttgattgcgattttacgattttttataaactaagtcatttatgaatatatacca-tttataacatatatttagtattatta 16125393  T
Q  574 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
           |||||  ||||| ||||||||||||||||| |  |||||||||||| |||||||| | ||  | ||||||||||||||||||||||||    
T  16125392 -tttttgggtaacgtccatcgattttgattgcgattttacaatttcttatatcgattctacaaatgtccttgagtaaaatccttcgattttgatt 16125299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 13100190 - 13100475
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||| ||||||||||||  || ||||| |||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||  |    
T  13100190 cattattgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggca 13100289  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    ||| |||| |||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||  |||          
T  13100290 aaaaccatcgattttgattgcgattttacaatttcttataaaccaagtcatttatgactatatacca-tttgtaacatatatttagtat--ttatttttt 13100386  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| ||||||||||||||||| | ||||||||||||| |||||||| | ||  | ||||||||||||| ||||||||||    
T  13100387 gggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgatt 13100475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 379 - 668
Target Start/End: Complemental strand, 9955166 - 9954877
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    ||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||       
T  9955166 tcattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagc 9955067  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 578  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||         
T  9955066 aaaatccatcgattttgattgcgattttacgatttcttataaactaggtcatttatgactatatacca-tttataacatatattcagtattattattttt 9954968  T
Q  579 nng-gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
      | ||||||||||| ||| ||||||||||||| |  ||||| |||||  |||||  | ||||  |   ||||||||||||||||||||||    
T  9954967 ttgtgtaaaatccatcgatcttgattgcgattttacaatttcctatatggattcttgaaaagtcctttggtaaaatccttcgattttgatt 9954877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 668
Target Start/End: Complemental strand, 25146898 - 25146612
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  25146898 cattgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagaca 25146799  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    || | |||  ||||||||||||| |||||||||||||||||||||||| || |||||||||||| || |||||||| |||||||||||| | |           
T  25146798 aagtacatcaattttaattgcga-tttacgatttcttataaactaagttatttatgactatata-caatttataacgtatatttagtatcaat-tttttt 25146702  T
Q  580 nggtaaaatccattgattttgattgcga-tttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| |||||||||||||| ||| |  ||||  |||||| |||||||  |||   | ||||||||||||||||||||||||    
T  25146701 gggtaaaatccatcgattttgattgcgatttttagaattttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgatt 25146612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 378 - 610
Target Start/End: Complemental strand, 9327347 - 9327116
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    ||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||    
T  9327347 atcattgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaataga 9327248  T
Q  478 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtca--tctatgactatataccattttataacatatatttagtattattann 575  Q
     ||||||||| |||||| ||||||||||||||||||||||||||||||||||  | | ||||||||||||| ||||||| |||||||||||||||||       
T  9327247 caaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttttttgactatatacca-tttataatatatatttagtattatt--t 9327151  T
Q  576 nnnnnggtaaaatccattgattttgattgcgattt 610  Q
         |||||||| ||| |||||||||||||||||    
T  9327150 ttttgggtaaaattcatcgattttgattgcgattt 9327116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 380 - 668
Target Start/End: Complemental strand, 9352193 - 9351907
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||| |    
T  9352193 cattgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagaca 9352094  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||| | |||||| |||||||||||| |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |           
T  9352093 aaatccgtcgattttgattgcgattttatgatttcttataaactaagtcatttttgactatatacca-tttataacatatatttagtattaat-tttttt 9351996  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||| ||| ||||||||||| ||||| |  ||||| |||||  |||||||| ||||  | |  ||||||||| |||||||||||    
T  9351995 gggtaaaattcatcgattttgattgtgattttacaatttcctatatagattctacaaaagtccttggataaaatcctacgattttgatt 9351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 380 - 666
Target Start/End: Complemental strand, 18304941 - 18304657
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc-aacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||  || ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||     
T  18304941 cattgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagac 18304842  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 578  Q
    |||||||||  ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||| || ||||| |||||||||||||| |          
T  18304841 aaaatccatcaattttgattgcga-tttacgatttcttataagctaagtcatttatgactatatacca-ttcataacgtatatttagtattaat-ttttt 18304745  T
Q  579 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttga 666  Q
      | |||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  |  |||||||||||||||||||||    
T  18304744 ttgataaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtcctttagtaaaatccttcgattttga 18304657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 377 - 668
Target Start/End: Complemental strand, 21846401 - 21846118
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  21846401 aatcattgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatag 21846302  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
    ||||||||||| |||||| |||||||||||   |||| | ||||||   ||||| ||| ||||||||  | ||||||||||||||||||||||| |        
T  21846301 aaaaaatccatcgattttgattgcgatttt---atttttcataaac---gtcatttataactatata-taatttataacatatatttagtattaat-ttt 21846210  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||| |||  |||||||||||||||| |  |||||||||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  21846209 tttgggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 21846118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 381 - 635
Target Start/End: Complemental strand, 13276395 - 13276143
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||  |||||||||||||  ||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||  ||    
T  13276395 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggcaa 13276296  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||| || |||||| |||||||||||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||           
T  13276295 aatcaatcgattttgattgcgattttacgatttcttataaattaagtcatttatgactatatatca-tttataacatatatttagtattatta-tttttt 13276198  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctaca 635  Q
    |||| | ||||| |||||||||||| |||| |  |||||||||||| ||||||||    
T  13276197 ggtatagtccatcgattttgattgcaattttacaatttcttatatcgattctaca 13276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 383 - 668
Target Start/End: Complemental strand, 19010073 - 19009792
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||| ||| | ||||||   ||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  483 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 582  Q
    ||||| |||||| |||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||||||  ||||||| |||| ||        ||    
T  19009973 tccatcgattttgattgcgattttacgatttcttataaattaagtcatttataactatatacca-tttataac--atatttaatatt-ttttttttgggg 19009878  T
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||||||||||||||| |  ||||| |||||| ||| |||| ||||  | ||||||||||||| ||||||||||    
T  19009877 taaaatccaatgattttgattgcgattttacaatttcctatatcgattttacaaaagttcttgagtaaaatcctttgattttgatt 19009792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 382 - 571
Target Start/End: Complemental strand, 42180193 - 42180005
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    |||||||||||||||  || ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||  |||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattat 571  Q
    || ||| |||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  42180093 atacatcgattttgattgtgattctacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatatagtattat 42180005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 383 - 665
Target Start/End: Original strand, 12513283 - 12513553
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    |||||||||||||| ||| ||||||||| |||  ||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||   ||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  483 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnngg 582  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||  ||||||| ||||||         ||    
T  12513383 tccatcgattttgattgcgattttacgatttcttataaactaagtcatttacgactatatacca-tatataac--atatttaatattat--attttttgg 12513477  T
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||| || ||||||||||||||||| |  ||||||||       ||||||||||| || ||||||||||||| |||||||    
T  12513478 taaaatctatcgattttgattgcgattttacaatttctta-------tctacagaagtagttgagtaaaatcctttgattttg 12513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 381 - 573
Target Start/End: Complemental strand, 9128969 - 9128778
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||| ||||||  ||| |||||||||||| | ||||| |||||||||||||||| || ||||||||||||  |||||||||||  |||||||| ||    
T  9128969 attgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagacaa 9128870  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta 573  Q
    ||| ||| |||||| |||||||||| ||||||||||||||||||||| || | ||||||||||||| |||||||||||| |||||||||||||    
T  9128869 aattcatcgattttgattgcgatttgacgatttcttataaactaagttatttttgactatatacca-tttataacatatctttagtattatta 9128778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 480 - 665
Target Start/End: Original strand, 47785958 - 47786140
Alignment:
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||           
T  47785958 aaatccatcggttttgattgcaattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt--ttttg 47786054  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     |||||||||||| |||||| ||| ||||||  ||||||||||||||||||||||| |||| || |||||||||||||||||||||    
T  47786055 tggtaaaatccatcgatttttatttcgattttgtgatttcttatatcaattctacaaaagtagttgagtaaaatccttcgattttg 47786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 379 - 519
Target Start/End: Complemental strand, 41032801 - 41032661
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||  ||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||      
T  41032801 tcattgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggc 41032702  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttata 41032661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 382 - 668
Target Start/End: Complemental strand, 17869873 - 17869594
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||||||||| |||||| ||||     ||||||||||||||||||||||||| |||||  ||||||| |||||||||| |||||||  |||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    || | | |||||| ||||| ||||||||||||||| ||||||||||| | ||| || |||||| | |||| |||||||||||||||||||||       |    
T  17869778 attcttcgattttgattgcaattttacgatttcttttaaactaagtcttttataaccatatacta-tttacaacatatatttagtattatta-ttttttg 17869681  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||| ||| ||||||||||||||||| |  |||| ||| ||  |||||| | ||||  | ||||||||||||| ||||||||||    
T  17869680 gtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctttgattttgatt 17869594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 470 - 663
Target Start/End: Original strand, 32881416 - 32881600
Alignment:
Q  470 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    |||||||  ||||| ||| |||||| |||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaattaagtcattcatgactatatacca-tttataacatatatttagtatt 32881514  T
Q  570 attannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 663  Q
     ||         |||||| |||||||||||||||||||||| |  |||||||||||| |||||||| | || || |||||||||||||||||||    
T  32881515 ttt--------tgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgattt 32881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 378 - 514
Target Start/End: Complemental strand, 17056131 - 17055995
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||||| | ||||| |||||||||||||||| ||||||||||||||   ||||||      
T  17056131 atcattgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataag 17056032  T
Q  478 aaaaatccattgattttaattgcgattttacgatttc 514  Q
     ||||||||| |||||| |||||||||||||||||||    
T  17056031 taaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 30619075 - 30619150
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcc 456  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  30619075 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 18337652 - 18337547
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||| ||| || | |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||||||      
T  18337652 tcattgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggc 18337554  T
Q  479 aaaatcc 485  Q
    |||||||    
T  18337553 aaaatcc 18337547  T

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Target: chr1; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 381 - 476
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||||||||||  |||||||||||||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 16434709 - 16434794
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||| ||||||| |||||||||||||||||  || | |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  16434709 ggtagaatccatcgattttgattgcgattt--tgttatcttatatcaattctacaaaagttgtcgagtaaaatccttcgattttgatt 16434794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 458 - 562
Target Start/End: Original strand, 18228278 - 18228380
Alignment:
Q  458 tagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacat 557  Q
    |||||||||||||||||||  |||||||||  ||||| |||| ||||||| ||||||||||||| ||||| || ||||||||||||||| ||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg-gattttatgatttcttataaattaagttatttatgactatatacca-tttataacat 18228375  T
Q  558 atatt 562  Q
    |||||    
T  18228376 atatt 18228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 468
Target Start/End: Complemental strand, 12800710 - 12800623
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 468  Q
    |||||||| |||||||  || |||||||||||||| |||||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  12800710 attgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 17055850 - 17055763
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||  ||||||||||| |||| |  ||||||| |||| |||||||| |||| || ||||||||||||||||||||||||    
T  17055850 ggtaaaatccatccattttgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgatt 17055763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 34478900 - 34478833
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacga 447  Q
    ||||||||| ||||||| ||| |||||| |||||||  |||||||| |||||||||||||||||||||    
T  34478900 cattgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 664
Target Start/End: Complemental strand, 41032701 - 41032621
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 664  Q
    ||||||||| |||||| |||||||||| |  |||||||||||| |||||||| || | || ||||||||| ||||||||||    
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgatttt 41032621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 47785790 - 47785837
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgc 426  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||    
T  47785790 tcattgttgtcaaaatcccaacataaatcctaaaattcaggattttgc 47785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 668
Target Start/End: Complemental strand, 14074397 - 14074327
Alignment:
Q  598 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 14074327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 473
Target Start/End: Original strand, 8772715 - 8772796
Alignment:
Q  392 aatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||| ||| ||||||| ||||| ||| ||||||||||||| |  | ||||||| |||||||||||||| ||| ||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgactttgtgtagcttcaacaactcaaatccatagcagagtcccaaaa 8772796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 473
Target Start/End: Original strand, 24117006 - 24117099
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||||||||| |  |  ||||| |||||||| | |||||| | ||||| |||||||||||||| ||||||  ||| |||||||||||||    
T  24117006 cattgttgtcaaaattccaatttaaattctaaaatttaagattttacaactttattcaccttcaacgattcaaatttatattagaatcccaaaa 24117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 467
Target Start/End: Complemental strand, 27917578 - 27917495
Alignment:
Q  384 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatc 467  Q
    ||||||||||||| ||| ||||| || ||||  |||||||||||| ||| || ||||||||| || ||||| ||||| ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatc 27917495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 664
Target Start/End: Original strand, 30619156 - 30619223
Alignment:
Q  597 tttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgatttt 664  Q
    |||||||||||||| |  |||| | ||||| |||||||| |||| || ||||||||||||||||||||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttt 30619223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 439 - 473
Target Start/End: Complemental strand, 27502273 - 27502239
Alignment:
Q  439 cttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    |||||||||||||||||||||| ||||||||||||    
T  27502273 cttcaacgactcaaatccatagcagaatcccaaaa 27502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 9128871 - 9128831
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||| ||| ||||||||||||||||||| |||||||||||    
T  9128871 aaaattcatcgattttgattgcgatttgacgatttcttata 9128831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Complemental strand, 9327246 - 9327206
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttcttata 9327206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 147; Significance: 4e-77; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 377 - 668
Target Start/End: Original strand, 8439 - 8726
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    ||||||||||||||||||||  || ||||||||||||| || ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||     
T  8439 aatcattgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataa 8538  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
      |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||        
T  8539 gcaaaatccattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataccatatatttagtattatt---t 8634  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||  || |  | |||||||||||||| |||||||||    
T  8635 ttttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacgaaaatacttgagtaaaatccttcaattttgatt 8726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 9e-75; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 381 - 668
Target Start/End: Complemental strand, 15528239 - 15527954
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||  |||||||| ||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||  |           
T  15528139 aatccatcgatttcgattgcgattttacgatttcttataaactaagtcatttataactatatacca-tttataacatatatttagtatta-aattttttg 15528042  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||  |||||||| ||||| ||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  15528041 ggggaaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 15527954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 380 - 665
Target Start/End: Original strand, 23897810 - 23898092
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||       
T  23897810 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 23897909  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||           
T  23897910 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt-ttttttttt 23898007  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     |||||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  23898008 tggtaaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttg 23898092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 380 - 665
Target Start/End: Complemental strand, 30912542 - 30912253
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  |    
T  30912542 cattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggca 30912443  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||| |||||||||||||||||||           
T  30912442 aaatccatagattttgattgcgattttacgatttcttataaactaagtcatttatgattatatatca-tttatcacatatatttagtattatttttttgt 30912344  T
Q  580 ng-----gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     |     ||||||||||| |||| |||||||||||  ||||||||||||||| ||| |||| |||| || || ||||||||||| ||||||    
T  30912343 ggtaaaagtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttg 30912253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 378 - 668
Target Start/End: Complemental strand, 17543872 - 17543574
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||  ||||||      
T  17543872 atcattgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataag 17543773  T
Q  478 aaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta---- 573  Q
     |||||| || |||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||        
T  17543772 caaaatctatggattttgattgcgattttactatttcttataaactaagtcatttacgactatatacca-tttataacatatatttagtattattatttt 17543674  T
Q  574 -----nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
                |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  17543673 ttttttatttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 17543574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 381 - 668
Target Start/End: Complemental strand, 26053425 - 26053140
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26053425 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26053326  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26053325 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26053228  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  26053227 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgatt 26053140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 381 - 668
Target Start/End: Complemental strand, 26073478 - 26073193
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| |||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||   ||    
T  26073478 attgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagcaa 26073379  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    |||||||  ||||| ||||  |||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||||||||           
T  26073378 aatccatcaattttgattgtcattttacgatttcttataaactaagttatttatgactatatacca-tttataacatatagttagtattatta-tttttt 26073281  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| |  |||||  ||||| |||||||| ||||  | |||||||||| |||||||||||||    
T  26073280 ggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgatt 26073193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 7223518 - 7223800
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||       || |||||||||||||||| ||||||||   |    
T  7223518 cattgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagca 7223610  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatat----atttagtattattann 575  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    |||||||||||||       
T  7223611 aaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttataacatatattaatttagtattatt--t 7223707  T
Q  576 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
         ||||||||||||||||| |||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  7223708 tgtttggtaaaatccattgattctgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 7223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 381 - 607
Target Start/End: Original strand, 17250057 - 17250280
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||  ||    
T  17250057 attgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggcaa 17250156  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||| ||||||||| || ||||            
T  17250157 aattcattgattttgattgcgattttacgatttcttataaactaagtcatttatgactatata--aatttataatatatatttattactatt-gtttttt 17250253  T
Q  581 ggtaaaatccattgattttgattgcga 607  Q
    |||||||||||||||||||||||||||    
T  17250254 ggtaaaatccattgattttgattgcga 17250280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 19748332 - 19748618
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||| ||||||||| ||| |||||| || ||| |||||||||| || |||||||||||| || ||||||||||| ||||||||||  |||||||  |    
T  19748332 cattgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggca 19748431  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||| ||| |||||| |||| |||||||||||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||||||||||          
T  19748432 aaattcatcgattttgattgtgattttacgatttcttataaactaagtcatttaagactatatatca-tttataaaatatatttagtattatta-ttttc 19748529  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  19748530 tggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 19748618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 377 - 668
Target Start/End: Original strand, 17103198 - 17103480
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||       || ||||||||||||||| |||||||||||||||||||||    
T  17103198 aatcattgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatag 17103290  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
    | ||||||||| |||||| ||| |||||||||||||||||||||||||||| || || ||||||||| || ||||| ||||||||||| ||||| |        
T  17103291 acaaaatccatcgattttgattacgattttacgatttcttataaactaagttatttacgactatatatca-tttatgacatatatttattattaat-ttt 17103388  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||| | ||||||    
T  17103389 tttaggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgatt 17103480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 427 - 570
Target Start/End: Original strand, 21354786 - 21354928
Alignment:
Q  427 gactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaag 526  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21354786 gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaaaatccatcgttttttattgcgattttacgatttcttataaactaag 21354885  T
Q  527 tcatctatgactatataccattttataacatatatttagtatta 570  Q
    | || ||||||||||||||| |||||||||||||||||||||||    
T  21354886 taatttatgactatatacca-tttataacatatatttagtatta 21354928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 380 - 646
Target Start/End: Complemental strand, 10509153 - 10508883
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    |||| |||||||||||| ||| ||||||||||||||||| | |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||  |    
T  10509153 cattattgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggca 10509054  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatatacc-----attttataacatatatttagtattattan 574  Q
    |||| ||| |||||| ||| ||||||||||| || |||||||||||||||| ||| ||||||||||       ||||||||||||||||| ||||||||     
T  10509053 aaattcatcgattttgattacgattttacgacttattataaactaagtcatttat-actatatacctaagtcatttataacatatatttattattattat 10508955  T
Q  575 nnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcga 646  Q
          | ||||||||||  |||||||||||||||| |  |||||||||||| |||||||| |||| |||||    
T  10508954 tattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagtcga 10508883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 403 - 547
Target Start/End: Complemental strand, 22498992 - 22498848
Alignment:
Q  403 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcga 502  Q
    |||||||||| | ||  |||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||| |||||||||||| |    
T  22498992 aaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatcgattttaattgcaa 22498893  T
Q  503 ttttacgatttcttataaactaagtcatctatgactatataccat 547  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  22498892 ttttacgatttcttataaacgaagtcatttatgactatataccat 22498848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 379 - 506
Target Start/End: Complemental strand, 6943591 - 6943464
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||     
T  6943591 tcattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagac 6943492  T
Q  479 aaaatccattgattttaattgcgatttt 506  Q
    ||||| ||| |||||| |||||||||||    
T  6943491 aaaattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 380 - 519
Target Start/End: Complemental strand, 27233407 - 27233268
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||| | | ||| ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |    
T  27233407 cattgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 27233308  T
Q  480 aaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||||| |||||| |||||||||||| |||||||||||    
T  27233307 aaatccatcgattttgattgcgattttatgatttcttata 27233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 380 - 549
Target Start/End: Complemental strand, 11327701 - 11327532
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  11327701 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 11327602  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 549  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| ||||||||||    
T  11327601 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccattt 11327532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 381 - 549
Target Start/End: Complemental strand, 7918510 - 7918342
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| || |||   ||    
T  7918510 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagcaa 7918411  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 549  Q
    |||| || |||||| |||| |||||| |||||| ||||||| |||||||| |||||||||||| |||||    
T  7918410 aatcaatcgattttgattgggattttgcgattttttataaattaagtcatttatgactatatatcattt 7918342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 384 - 540
Target Start/End: Complemental strand, 2912373 - 2912218
Alignment:
Q  384 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaat 483  Q
    ||||||||||||| ||| |||||| ||||||| |||||||||| ||||||| || ||||||||| |||||| ||||||||||||  ||||||   |||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaat-catagtagaatcttaaaataagcaaaat 2912275  T
Q  484 ccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactat 540  Q
     ||| |||||| ||||| |||||||||||| |||||||| ||||||| |||||||||    
T  2912274 tcatcgattttgattgcaattttacgattttttataaacaaagtcatttatgactat 2912218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 380 - 473
Target Start/End: Complemental strand, 18491167 - 18491074
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||| ||||||||||| ||| ||||||||||||| ||| |||||||  |||| ||||||||||||||||||||||||||| ||||||||||||    
T  18491167 cattgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaa 18491074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 5422878 - 5422798
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 460  Q
    ||||||||||||||||| ||| ||||| |||||||||| |||||||| ||||| |||||||||||||||||||||| ||||    
T  5422878 cattgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 515 - 668
Target Start/End: Complemental strand, 7918343 - 7918194
Alignment:
Q  515 ttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatg 614  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||| |||||||||||||        |||||||||||| ||||||||||||||||| |      
T  7918343 ttataaattaagtcatttatgactatatatcattt-ataacataaatttagtattatt---tttttggtaaaatccatcgattttgattgcgattttaca 7918248  T
Q  615 atttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||| |||||  |||||||| ||||  | ||||||||| ||||||||||||||    
T  7918247 atttcctatattgattctacaaaagtccttgagtaaaattcttcgattttgatt 7918194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 4842025 - 4841953
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||    
T  4842025 taaatcctaaaatt--ggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataatag 4841953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 458  Q
    |||| ||||||| | ||| ||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 4841760 - 4841673
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||| ||| ||||||||||||||||| | ||||||||||  | |||||||| |||| || ||||||||||||| ||||||||||    
T  4841760 ggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctttgattttgatt 4841673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 582 - 668
Target Start/End: Complemental strand, 2912191 - 2912105
Alignment:
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| | ||||||||||||||||| |  |||||||||| |||||||||| |||| || |||||||||||||| |||| ||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgatt 2912105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 11327493 - 11327406
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  11327493 ggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgatt 11327406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 22498371 - 22498284
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | |||||||||| ||| |||||||||    
T  22498371 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgatt 22498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 458
Target Start/End: Complemental strand, 10958317 - 10958239
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccat 458  Q
    ||||||||||||||||  ||| ||||||  ||||||||||||||||||||||   |||||||||| || ||||||||||    
T  10958317 cattgttgtcaaaatcgcgacttaaatctcaaaattcaggattttgcgacttgactcaccttcaaggattcaaatccat 10958239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 12245108 - 12245213
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| |||||| |||  |||||| |||||||||| ||||||||||||| ||||| ||||  || | |||||||| | | |||||||||| ||| |    
T  12245108 cattgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttcatggatttaaatccattgcaaaatcccaaaacagata 12245207  T
Q  480 aaatcc 485  Q
    ||||||    
T  12245208 aaatcc 12245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 408 - 473
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  408 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||| ||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||| ||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 473
Target Start/End: Original strand, 27890137 - 27890225
Alignment:
Q  384 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    |||||||||||| |||| ||| ||| |||||||||| |||||||||||| |  | ||| |||||||||||||||||  ||||||||||||    
T  27890137 gttgtcaaaatc-tgacttaagtcccaaaattcaggtttttgcgactttgtgtagctttaacgactcaaatccatatcagaatcccaaaa 27890225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 3573831 - 3573744
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||  ||| ||||||||||||||||| |  |||||||||||| ||||||||  ||| || ||||||| |||| |||||||||||    
T  3573831 ggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacgattttgatt 3573744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 473
Target Start/End: Complemental strand, 18490987 - 18490922
Alignment:
Q  408 ctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||| ||| ||||||| ||||| |||||||||||||||| ||| |||||| | ||||||||||    
T  18490987 ctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaa 18490922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 625
Target Start/End: Complemental strand, 27233308 - 27233267
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttatat 625  Q
    ||||||||| ||||||||||||||||| ||||||||||||||    
T  27233308 aaaatccatcgattttgattgcgattttatgatttcttatat 27233267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 473
Target Start/End: Complemental strand, 33583855 - 33583766
Alignment:
Q  384 gttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||||||  ||| ||| ||| ||||| |||||||||  ||||||  | | |||||||||||||||||||||| |||| |||||||    
T  33583855 gttgtcaaaatcgcgacttaagtcccaaaatccaggatttttagactttaattagcttcaacgactcaaatccatagcagaaacccaaaa 33583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 473
Target Start/End: Complemental strand, 8285827 - 8285760
Alignment:
Q  406 tcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||| ||||||||||||||||  |  | ||||||||||||||||||| || | ||||||||||    
T  8285827 tcctaaaatccaggattttgcgacttgatctagcttcaacgactcaaatccacagcaaaatcccaaaa 8285760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 27614651 - 27614594
Alignment:
Q  503 ttttacgatttcttataaac--taagtcatctatgactatataccattttataacatat 559  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||||||||||    
T  27614651 ttttacgatttcttataaactataattcatttatgactatatacca-tttataacatat 27614594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 449
Target Start/End: Original strand, 7359871 - 7359916
Alignment:
Q  404 aatcctaaaattcaggattttgcgactttcttcaccttcaacgact 449  Q
    |||||||||||| | ||||| |||||||| ||||||||||||||||    
T  7359871 aatcctaaaatttaagatttagcgactttattcaccttcaacgact 7359916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 8545087 - 8545030
Alignment:
Q  388 tcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaac 445  Q
    ||||||||| ||  |||||||||||||| ||||||||||||||||  |||| ||||||    
T  8545087 tcaaaatcccgatttaaatcctaaaatttaggattttgcgactttactcactttcaac 8545030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 584 - 624
Target Start/End: Original strand, 17250155 - 17250195
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttata 624  Q
    ||||| ||||||||||||||||||||| | |||||||||||    
T  17250155 aaaattcattgattttgattgcgattttacgatttcttata 17250195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 2e-72; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 377 - 668
Target Start/End: Complemental strand, 31238110 - 31237820
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||| ||||||||||||  |||||||    
T  31238110 aatcattgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaatag 31238011  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattta-gtattattann 575  Q
     |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| | |||||||||      
T  31238010 gaaaaatccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgattatatacca-tttataacatatattcatgtattatta-t 31237913  T
Q  576 nnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
         |||||||||||| |||||||||||| |||| |  ||||  |||||| ||| |||| ||||  | ||||||||||||||||| ||||||    
T  31237912 tttttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgatt 31237820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 382 - 664
Target Start/End: Complemental strand, 35566082 - 35565802
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    |||||||||||||||  || ||||||  ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||||||||||||  |||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnng 581  Q
    |||||| |||||| |||||  |||||||||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||| ||        |    
T  35565982 atccatcgattttgattgcagttttacgatttcttataaacaaagtcatttatgactatata-caatttataacatatatttagtattttt----ttttg 35565888  T
Q  582 gtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag---taaaatccttcgatttt 664  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||| |||| || |||   |||||||||||||||||    
T  35565887 gtaaaatccatcgattttgattgtgattttatgatttcttatatcgattctacaaaagtagttgagtaataaaatccttcgatttt 35565802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 380 - 665
Target Start/End: Complemental strand, 15588979 - 15588702
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||| ||||||||||| ||| ||| || ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||| |    
T  15588979 cattgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagaca 15588881  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    ||||| || | |||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||   || ||||||||||||||||||           
T  15588880 aaatcaatcgttttttattgcgattttacgatttcatataaactaagtcatttatgattatataccatt---tatcatatatttagtattatt---tttt 15588787  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     |||||||||||| ||||||||||||||||| || |||||||||||| || |||| |||||  | |||||||||||||||||||||    
T  15588786 tggtaaaatccatcgattttgattgcgattttataatttcttatatcgatcctac-gaagtaattgagtaaaatccttcgattttg 15588702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 377 - 668
Target Start/End: Original strand, 1404779 - 1405068
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||     
T  1404779 aatcattgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactat 1404878  T
Q  477 aaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannn 576  Q
      ||||||||| |||||| |||| ||||||||||||||||||| |||||||||| |||||||||| |||| ||||||||||||| |||| | |||||       
T  1404879 gcaaaatccatcgattttgattgtgattttacgatttcttatatactaagtcatttatgactatacacca-tttataacatatacttaggaatattatta 1404977  T
Q  577 nnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
          | |||||||| |||||||||||| |||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  1404978 tttt-tttaaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgatt 1405068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 379 - 549
Target Start/End: Original strand, 30432417 - 30432587
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||||||  ||||| |||||||  |||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||     
T  30432417 tcattgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagac 30432516  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattt 549  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  30432517 aaaatccatcgattttgattgcaattttacgatttcttataaactaagtcatttattactatataccattt 30432587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 379 - 668
Target Start/End: Original strand, 36429846 - 36430133
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    ||||||||||||||||||  || ||||||||| |||  |||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||      
T  36429846 tcattgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggc 36429945  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 578  Q
    ||||||||| |||||| ||||||||| |||||||||||||||||||||| || |||||||||||| || ||| |||||||||||||||||| ||          
T  36429946 aaaatccatcgattttgattgcgattgtacgatttcttataaactaagtaatttatgactatatatca-tttctaacatatatttagtatt-tttttttt 36430043  T
Q  579 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
      |||||||||||| |||||||||||| |||| |   ||| || |||| |||||||| || |  | |||||| |||||||||||||||||    
T  36430044 taggtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatccttcgattttgatt 36430133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 383 - 572
Target Start/End: Original strand, 31578007 - 31578194
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    |||||||||||||| ||| |||||  ||||||| | |||||||||| |||||||||||||||||| | |||||| ||||||||||| ||||||   ||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  483 tccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 572  Q
    |||||  ||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  31578106 tccatcaattttgattgcaattttacgatttattataaactaagtcatttatgactatatacca-tttataacatatatttagtattatt 31578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 380 - 668
Target Start/End: Original strand, 20063713 - 20064008
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| |||| |||||||| || | |||||||  |||||||| |||||| |||| ||||||||||||||||||||||||||  |    
T  20063713 cattgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggca 20063812  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagt-attattannnnn 578  Q
    |||| ||| ||||||||||||||||||||| |||||||| |||||| |||| ||||||| |||||||||| || |||| |||||| | ||||||          
T  20063813 aaattcatcgattttaattgcgattttacgttttcttatgaactaattcatttatgactgtataccattt-atcacatgtatttatttattatttatttt 20063911  T
Q  579 nn-------ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
             |||||||||||| ||||||| ||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  20063912 attttttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgatt 20064008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 380 - 510
Target Start/End: Complemental strand, 23863451 - 23863321
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||| |||||||  || ||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||  |    
T  23863451 cattgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggca 23863352  T
Q  480 aaatccattgattttaattgcgattttacga 510  Q
    |||||||| ||||||  ||||||||||||||    
T  23863351 aaatccatcgattttggttgcgattttacga 23863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 464 - 665
Target Start/End: Complemental strand, 1690774 - 1690575
Alignment:
Q  464 aatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatattt 563  Q
    |||||||||||||   ||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||| ||||||||    
T  1690774 aatcccaaaataggcgaaacccattgattttgattgcgattttacgatttcttataaactaagtcttttatgactatatacca-tttataaaatatattt 1690676  T
Q  564 agtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 663  Q
    | ||||||||       ||||||||  || ||||||||||||||||| | || |||||||||| |||  ||| |||| ||  |||||| ||||||| |||    
T  1690675 aatattatta-ttttttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttt 1690577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 383 - 514
Target Start/End: Complemental strand, 25539353 - 25539222
Alignment:
Q  383 tgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaa 482  Q
    |||||| ||||||| ||  |||||||||||||||| || ||||| | |||||||||||||||||||| |||||||||| ||||||| ||||||   ||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  483 tccattgattttaattgcgattttacgatttc 514  Q
    ||||| |||||| | |||||||| ||||||||    
T  25539253 tccatcgattttgactgcgatttaacgatttc 25539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 381 - 507
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatccta--aaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||  ||  |||||||||  ||||  ||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  479 aaaatccattgattttaattgcgatttta 507  Q
    ||||||||| |||||| ||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 1690892 - 1690796
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    ||||||||||||||  | ||| |||||| ||||||| ||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  1690892 cattgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaatag 1690796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 476
Target Start/End: Complemental strand, 5395778 - 5395682
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||||||||| |||| ||| || ||||||||||||||| |||||| ||||||||    
T  5395778 cattgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaatag 5395682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 486
Target Start/End: Original strand, 15266079 - 15266187
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||  ||||| |||| |||||| || ||||||||||  || ||| |||||||||     
T  15266079 atcattgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaatagg 15266178  T
Q  478 aaaaatcca 486  Q
    |||||||||    
T  15266179 aaaaatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 381 - 475
Target Start/End: Original strand, 16766710 - 16766804
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    ||||||||||||||  |||| |||||| ||||||| |||||||| ||| ||| |||||||||||||| |||||||||||| ||||||| ||||||    
T  16766710 attgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 16766922 - 16767070
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||| |||||| ||||||| ||||| |||| |||||| |||||||| ||||||        |||||| ||| ||||||||||||||||||| | ||||    
T  16766922 taaactgagtcatttatgactgtatacaattt-ataacaaatatttagcattatttttgttttggtaaa-tcctttgattttgattgcgattttacgatt 16767019  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||| | |||| || |||||||||||||| |||||||||    
T  16767020 tcttatatcgattctataaaagtagttgagtaaaatccttcaattttgatt 16767070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 409 - 473
Target Start/End: Original strand, 34841584 - 34841648
Alignment:
Q  409 taaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  34841584 taaaatttaggattctgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 668
Target Start/End: Complemental strand, 13502637 - 13502517
Alignment:
Q  548 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 647  Q
    ||||||||||||||||| |||||||        |||||||||||| ||||||||||||||||| | ||||||||||||  |||||||| || | || ||     
T  13502637 tttataacatatatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgac 13502538  T
Q  648 taaaatccttcgattttgatt 668  Q
    ||| ||||||| |||||||||    
T  13502537 taatatccttcaattttgatt 13502517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 417 - 476
Target Start/End: Original strand, 31023259 - 31023318
Alignment:
Q  417 aggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  31023259 aggattttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaatag 31023318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 668
Target Start/End: Complemental strand, 19262279 - 19262160
Alignment:
Q  548 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 647  Q
    ||||||||||||| ||||||||||||       |||||| ||| | ||||||||||||||||| |  |||||||||||| |||||||| ||||  | |||    
T  19262279 tttataacatatagttagtattattatttttt-ggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgag 19262181  T
Q  648 taaaatccttcgattttgatt 668  Q
    ||||||| |||||||||||||    
T  19262180 taaaatctttcgattttgatt 19262160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 25539138 - 25538989
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||| |||||| ||||||||||||| || | ||||||||||||||| ||||||        ||||||||| || |||||||||||| |||| |  |||    
T  25539138 taaactgagtcatttatgactatatacaatat-ataacatatatttagcattatttctgttttggtaaaatctatcgattttgattgcaattttacaatt 25539040  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    | ||||||| |||||||| |||| ||  ||||||||||||  |||||||||    
T  25539039 ttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgatt 25538989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 668
Target Start/End: Original strand, 27406927 - 27407076
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||| |||||| ||| ||||||||| | ||||||| |||||||||| ||||||        ||| ||||||||  |||||||||||||||| ||||||    
T  27406927 taaactgagtcatttattactatatac-agtttataatatatatttagcattatttttgttttggtgaaatccatcaattttgattgcgattttatgatt 27407025  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||  ||| | || |||| || ||||||||| ||| ||||||||||    
T  27407026 tcttatattgattatccaaaagtagttgagtaaaattcttggattttgatt 27407076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 476
Target Start/End: Original strand, 17995051 - 17995150
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatag 476  Q
    |||||||||||| ||||| | ||| |||| |||||||| ||| ||||||||| ||| |||||| |||||||||||||| | ||| | ||| |||||||||    
T  17995051 aatcattgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaatag 17995150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 460
Target Start/End: Original strand, 19245149 - 19245232
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 460  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||||| |||||||  ||| ||| | ||| ||||||||||||    
T  19245149 aatcattgttgtcaaaatcccgacttaaattttaaaattcaggattttacgactttactcatctttagcgattcaaatccatag 19245232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 30433013 - 30433100
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||  |||||||||||||||| |  ||||| |||||| |||||| | ||||  | |||||||||| |||||||||||||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgatt 30433100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 466
Target Start/End: Original strand, 24473335 - 24473420
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 466  Q
    |||||||||| ||||| |||| ||| ||| ||||||||||||||||||| |||  ||||||||||| | |||||||| ||| |||||    
T  24473335 cattgttgtcgaaatcgtgacttaagtcccaaaattcaggattttgcgattttactcaccttcaac-attcaaatccgtagcagaat 24473420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 13502601 - 13502561
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacgatttcttata 13502561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 468
Target Start/End: Complemental strand, 27750282 - 27750194
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcc 468  Q
    ||||||||||||||||  ||| ||| ||| ||||| || ||||||||||||||  | | ||| |||||||||||||||||  |||||||    
T  27750282 cattgttgtcaaaatcgcgacttaagtcccaaaatacaagattttgcgacttttcttaacttaaacgactcaaatccataacagaatcc 27750194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 519
Target Start/End: Original strand, 16766987 - 16767026
Alignment:
Q  480 aaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  16766987 aaatcctttgattttgattgcgattttacgatttcttata 16767026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 459
Target Start/End: Complemental strand, 15516667 - 15516610
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccata 459  Q
    |||||| ||| |||||| ||||||||||||| |||||||||||| | |||||| ||||    
T  15516667 taaatcttaatattcagcattttgcgactttattcaccttcaacaattcaaattcata 15516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 1e-70; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 379 - 668
Target Start/End: Original strand, 28745768 - 28746061
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||     
T  28745768 tcattgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagac 28745867  T
Q  479 aaaatccattgattttaattgcgattttacgatttc------ttataaactaagtcatctatgactatataccattttataacatatatttagtattatt 572  Q
    ||||| ||| |||||| |||||||||||||||||||      |||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||| |    
T  28745868 aaaattcatcgattttgattgcgattttacgatttcttataattataaactaagtcatttatgactatatacta-tttataacatatatttactattaat 28745966  T
Q  573 annnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
            |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||| ||||||||||||||    
T  28745967 -ttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagttcttgagtaaaattcttcgattttgatt 28746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 380 - 547
Target Start/End: Original strand, 29067283 - 29067450
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29067283 cattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaca 29067382  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccat 547  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  29067383 aaatccatcgattttgattgtgattttacgatttcttataaactaagtcatttatgactatataccat 29067450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 379 - 663
Target Start/End: Original strand, 39427900 - 39428183
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    |||| ||||||||||||| ||  |||||  |||||| | ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||     
T  39427900 tcatcgttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagac 39427999  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnn 578  Q
    ||| ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||| |          
T  39428000 aaagtccatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacta-cttataacatatatttagtattaattttttt 39428098  T
Q  579 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 663  Q
      |||||||||||| ||||||||||||||||| |  ||||| |||||| |||| ||| || |  | |||||||||||||||||||    
T  39428099 tgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattccacaaaaatctttgagtaaaatccttcgattt 39428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 380 - 661
Target Start/End: Complemental strand, 8156261 - 8155980
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa-tagaa 478  Q
    |||||||||||||||||  || ||||| ||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||| ||||     
T  8156261 cattgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagac 8156162  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-nnnn 577  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||||||||         
T  8156161 aaaatccatcgattttgattgcgattttacgatttcttataaactaagttatttataactatatacca-tttataacatatatttagtattattattatt 8156063  T
Q  578 nnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgat 661  Q
       |||||||||||  ||| ||||||||||||| |   |||||||||||||| ||||| |||| || |||||||||||||||||    
T  8156062 tttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgat 8155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 668
Target Start/End: Complemental strand, 24620334 - 24620041
Alignment:
Q  379 tcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac---tttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    |||||||||||||||| | ||| |||||||||||||| | |||||||||||   ||||||||||||||||||||||||| || ||||||||| |||||||    
T  24620334 tcattgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaata 24620235  T
Q  476 gaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattatta-- 573  Q
    |  ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||||||||||||| |||      
T  24620234 ggcaaaattcatcgattttaattgcaattttacgatttcttataaactaagtcatttatgattatatacca-tttataaaatatatttagtatttttatt 24620136  T
Q  574 nnnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
           |||||||||||   |||||||||||||||| |  ||||  |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  24620135 tttttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgatt 24620041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 381 - 665
Target Start/End: Original strand, 22137278 - 22137559
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||| | ||||||||||| |||||||||||||||| ||| || |||||||||||||||| |||| ||||||||||||||| ||||||||||||   ||    
T  22137278 attgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgcaa 22137377  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnn 580  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| | |||||||| |||||||||||||||||           
T  22137378 aatccatcgattttaattgcgatttt-cgatttcttatttactaagtcatttatgactatatacta-tttataac-tatatttagtattattaatttttt 22137474  T
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
     |||||||||||  |||||||||  | ||| | ||||||||||||| |||||||| |||| || ||||||||| ||| |||||||    
T  22137475 tgtaaaatccatcaattttgattttggttttacgatttcttatatcgattctacaaaagtagttgagtaaaattctttgattttg 22137559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 454 - 664
Target Start/End: Original strand, 42696920 - 42697129
Alignment:
Q  454 tccatagtagaatcccaaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttata 553  Q
    |||||||||||||| ||||||||  ||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacgatttcttataaactaagtcatttatgactatatacca-tttata 42697018  T
Q  554 acatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaat 653  Q
    |||||||||| ||||| ||        |||||||||||| |||||||||||||| || ||||||||||||||| |||||||| |||| || || ||||||    
T  42697019 acatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgatttcttatatcgattctacaaaagtagttgaataaaat 42697118  T
Q  654 ccttcgatttt 664  Q
    ||||| |||||    
T  42697119 ccttcaatttt 42697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 386 - 668
Target Start/End: Original strand, 17064326 - 17064592
Alignment:
Q  386 tgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 485  Q
    ||||||||||| ||| |||||| |||||||||||||||||||| | | ||||||||||||||||| ||| ||||||||||| | |||||||| ||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  486 attgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaa 585  Q
    || |||||| ||||||||||||||||||||||||||||||||||| |||||||||               |||||||||||||| ||        |||||    
T  17064426 atcgatttttattgcgattttacgatttcttataaactaagtcatttatgactat---------------atatatttagtatt-ttttttttttggtaa 17064509  T
Q  586 aatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||| |||||||||||| |||| |  |||||||||||  |||||||| |||| || ||||||||||||||||||||||||    
T  17064510 aatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatccttcgattttgatt 17064592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 382 - 530
Target Start/End: Complemental strand, 3449419 - 3449272
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaa 481  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||||| |||||||  |||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  482 atccattgattttaattgcgattttacgatttcttataaactaagtcat 530  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||||||    
T  3449320 atccatagatttttattgcgattttacgatttcttataaagtaagtcat 3449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 381 - 530
Target Start/End: Original strand, 20756039 - 20756188
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||||||||||||| ||| |||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||  ||    
T  20756039 attgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggcaa 20756138  T
Q  481 aatccattgattttaattgcgattttacgatttcttataaactaagtcat 530  Q
    |||| || |||||| ||||| |||||||||||||||||||||||||||||    
T  20756139 aatcaatcgattttgattgcaattttacgatttcttataaactaagtcat 20756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 390 - 573
Target Start/End: Original strand, 21963438 - 21963620
Alignment:
Q  390 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 489  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  490 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 573  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21963538 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 390 - 573
Target Start/End: Original strand, 21985874 - 21986056
Alignment:
Q  390 aaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattg 489  Q
    ||||||| ||| |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||| ||||| ||||||   ||||||||| |    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  490 attttaattgcgattttacgatttcttataaactaagtcatctatgactatata-ccattttataacatatatttagtattatta 573  Q
    ||||| || |||||||| |||||||||||  |||||||||| ||||||||||||  |  |||||||| |||||||||||||||||    
T  21985974 attttgatagcgatttt-cgatttcttatttactaagtcatttatgactatatatactatttataac-tatatttagtattatta 21986056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 381 - 507
Target Start/End: Complemental strand, 30727820 - 30727694
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaa 480  Q
    |||||| ||||||||||||| |||||| |||||| | | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  30727820 attgttatcaaaatcctgacttaaatcttaaaatcctgaattttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaa 30727721  T
Q  481 aatccattgattttaattgcgatttta 507  Q
    ||| ||| |||||| ||||||||||||    
T  30727720 aattcatcgattttgattgcgatttta 30727694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 402 - 568
Target Start/End: Complemental strand, 22494889 - 22494731
Alignment:
Q  402 taaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatccattgattttaattgcg 501  Q
    |||||||||||||    |||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| | ||||| ||| |||||| ||||||    
T  22494889 taaatcctaaaatctgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgattgcg 22494790  T
Q  502 attttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtat 568  Q
    ||||||||       |||||||||||||  ||||||||||||||| |||||||||||||||||||||    
T  22494789 attttacg-------ataaactaagtcagttatgactatatacca-tttataacatatatttagtat 22494731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 380 - 485
Target Start/End: Original strand, 27676355 - 27676460
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||  |    
T  27676355 cattgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggta 27676454  T
Q  480 aaatcc 485  Q
    ||||||    
T  27676455 aaatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 470 - 572
Target Start/End: Complemental strand, 15515296 - 15515195
Alignment:
Q  470 aaaatagaaaaaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtatt 569  Q
    ||||||| |||||| | | |||||||| | |||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  15515296 aaaataggaaaaattcgtcgattttaacttcgatttcacgatttcttataaactaagtcatttatgactatatacca-tttataacatatatttagtatt 15515198  T
Q  570 att 572  Q
    |||    
T  15515197 att 15515195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 378 - 527
Target Start/End: Complemental strand, 25870508 - 25870350
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttc----aacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||||||||||||  ||| ||||||||||||| || ||||||| ||||||||||| ||||    |||||||||||| | |||||||| | |||||    
T  25870508 atcattgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaa 25870409  T
Q  474 tagaaaaaatcca-----ttgattttaattgcgattttacgatttcttataaactaagt 527  Q
    |||  ||||||||     |||||||| |||||||||||||||||||||||||| |||||    
T  25870408 taggcaaaatccatcgatttgattttgattgcgattttacgatttcttataaattaagt 25870350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 380 - 530
Target Start/End: Complemental strand, 22356183 - 22356032
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttctt-caccttcaacgactcaaatccatagtagaatcccaaaatagaa 478  Q
    ||||||| ||||||| | ||| |||||||||||||||||||||||  || ||| || || ||||||| | |  ||| ||||||||||||| ||||||       
T  22356183 cattgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagc 22356084  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttataaactaagtcat 530  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||||    
T  22356083 aaaatccatgaattttgattgcgattttacgatttcttataaactaagtcat 22356032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 381 - 475
Target Start/End: Complemental strand, 24649818 - 24649724
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    |||||||||||||||| ||| |||||| ||||||  ||||||||  ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  24649818 attgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaata 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 380 - 473
Target Start/End: Complemental strand, 15806635 - 15806543
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||||||||||| ||| ||||||||| ||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  15806635 cattgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaa 15806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 27676634 - 27676721
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||||||||||||||| ||||| | ||||||||||||| ||| |||| |||| || |||||||||| |||||||||||||    
T  27676634 ggtaaaatccattgattttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgatt 27676721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 17796374 - 17796473
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  17796374 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 17796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 19104814 - 19104913
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    ||||||||||||||||| | ||| |||||| ||||||  |||||||| ||||||| |||| ||||||| |||||||| ||||| ||||||| ||||||||    
T  19104814 atcattgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaataga 19104913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 403 - 485
Target Start/End: Complemental strand, 10873053 - 10872971
Alignment:
Q  403 aaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatcc 485  Q
    |||||||||||| |||||||||| ||  || ||||||||||||||||||||||||||| |||||| ||||||||  |||||||    
T  10873053 aaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 665
Target Start/End: Complemental strand, 25870294 - 25870169
Alignment:
Q  538 tatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacaga 637  Q
    |||||||||||| ||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  |||||||||||| |||||||| |    
T  25870294 tatataccattt-ataacatatatttagtattatt-gttttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaa 25870197  T
Q  638 agtggtcgagtaaaatccttcgattttg 665  Q
      | || ||||||||||||| |||||||    
T  25870196 cttagttgagtaaaatcctttgattttg 25870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 6136500 - 6136413
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||| ||||| | ||||||||||||| |||||| | |||| || |||||||||| || ||||||||||    
T  6136500 ggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgattttgatt 6136413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 668
Target Start/End: Original strand, 13286142 - 13286229
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| |||||| |||| ||||| | ||||||||||||| |||||||| |||| || |||||||||| || ||||||||||    
T  13286142 ggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgattttgatt 13286229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 382 - 460
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  382 ttgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 460  Q
    ||||||||||||| | ||  |||||| |||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 581 - 667
Target Start/End: Original strand, 28135960 - 28136046
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgat 667  Q
    ||||||||  ||||||||||||| | |||| |  |||||||||||||||| |||| |||| || |||||||||||||||||||||||    
T  28135960 ggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcgattttgat 28136046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 17796265 - 17796364
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796265 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 17796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 17796483 - 17796582
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  17796483 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 17796582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 19104705 - 19104804
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||| |||||||||| |  || |||||| ||||||  ||||||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104705 atcattattgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaataga 19104804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 378 - 477
Target Start/End: Original strand, 19104923 - 19105022
Alignment:
Q  378 atcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataga 477  Q
    |||||||||||||||||   ||  |||||| ||||||  |||||||| ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||    
T  19104923 atcattgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaataga 19105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 668
Target Start/End: Original strand, 20756188 - 20756307
Alignment:
Q  548 tttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgag 647  Q
    |||||||||||||||||||||||||        |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| || |  | |||    
T  20756188 tttataacatatatttagtattatt-tcttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgag 20756286  T
Q  648 taaaatccttcgattttgatt 668  Q
    ||||||| ||| |||||||||    
T  20756287 taaaatctttcaattttgatt 20756307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 581 - 665
Target Start/End: Complemental strand, 3449241 - 3449157
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||||||  |||||||||||||||| |   ||||||||||| |||||||| |||| || || ||||||| ||||||||||    
T  3449241 ggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcattcgattttg 3449157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 581 - 663
Target Start/End: Original strand, 29067475 - 29067557
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattt 663  Q
    |||||||||||| ||||||||||||||||| |  | |||  |||||||||||||| || |  | |||||||||||||||||||    
T  29067475 ggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgattt 29067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 13005927 - 13006019
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    |||||||||||||||  ||| |||||   ||||||||  ||||||||||||| |||||||| |||   |||||||||||| | ||||||||||    
T  13005927 attgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctttaacatttcaaatccatagcaaaatcccaaaa 13006019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 27676637 - 27676677
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27676637 aaaatccattgattttgattgtgattttacgatttcttata 27676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 42696870 - 42696914
Alignment:
Q  385 ttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgac 429  Q
    |||||||||||| ||| |||||| |||||||||||||||||||||    
T  42696870 ttgtcaaaatcccgacttaaatcataaaattcaggattttgcgac 42696914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 10872646 - 10872559
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||  ||||| |||  ||||| | ||||||||||||| ||||| || |||| ||  ||||||||||||| |||||||||    
T  10872646 ggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttcaattttgatt 10872559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 6136497 - 6136457
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  6136497 aaaatccatcgattttgattgtgattttacgatttcttata 6136457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 519
Target Start/End: Original strand, 13286145 - 13286185
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||| |||| |||||||||||||||||||    
T  13286145 aaaatccatcgattttcattgtgattttacgatttcttata 13286185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 624 - 668
Target Start/End: Original strand, 22971050 - 22971094
Alignment:
Q  624 atcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||  | ||||||||||||||||||||||||    
T  22971050 atcaattctacaaaagtccttgagtaaaatccttcgattttgatt 22971094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 25870250 - 25870210
Alignment:
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||| ||||||||||||| ||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttacaatttcttata 25870210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 120; Significance: 5e-61; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 380 - 668
Target Start/End: Complemental strand, 7585 - 7299
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||| | ||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||| |||||||  |    
T  7585 cattgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggca 7486  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnn 579  Q
    |||| ||| |||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||  ||| ||||||||||||||||||||           
T  7485 aaattcatcgattttaattgcgattttacgatttcttataaacgaagtaatttatgaatatatacca-attagaacatatatttagtattatt-gttttt 7388  T
Q  580 nggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
     |||||||| ||| ||||||||||||||||  |  ||||| |||||| |||| ||| ||||  | ||||||||||||||||||||||||    
T  7387 tggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatccttcgattttgatt 7299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 380 - 668
Target Start/End: Complemental strand, 93834 - 93549
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||||| ||| ||||||||||||| ||| ||||||  | |||||||||| ||||| |||||||||||||| ||||| | |||||||       
T  93834 cattgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcg 93737  T
Q  480 aaatccattgattttaattgcgattttacgatttcttataaactaagtcatctatgact-atataccattttataacatatatttagtattattannnnn 578  Q
    |||||||| |||||| ||||||||||||||||||||| |||| |||||| | ||||||| |||||| | || ||||||||||||||||| ||||          
T  93736 aaatccatcgattttgattgcgattttacgatttcttttaaattaagtcgtttatgactaatatacga-ttcataacatatatttagtaatatt-tgttt 93639  T
Q  579 nnggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
      |||||||||||| ||||||||||||||||| | ||||| ||||||| |||||||| |||| || || |||||||||||||||||||||    
T  93638 ttggtaaaatccatcgattttgattgcgattttacgatttattatatcgattctacaaaagtagttgaataaaatccttcgattttgatt 93549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 1e-30; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 380 - 519
Target Start/End: Complemental strand, 231 - 91
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata-gaa 478  Q
    ||||||||  || |||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||| |      
T  231 cattgttgataagatcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcg 132  T
Q  479 aaaatccattgattttaattgcgattttacgatttcttata 519  Q
    ||||||||| |||||| |||| |||||||| ||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttata 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 584 - 665
Target Start/End: Complemental strand, 131 - 51
Alignment:
Q  584 aaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttg 665  Q
    ||||||||| ||||||||||| ||||| |  |||||||||||| |||||||| |||| || |||||||||||||||||||||    
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctaca-aagtagttgagtaaaatccttcgattttg 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 518 - 668
Target Start/End: Complemental strand, 8952 - 8803
Alignment:
Q  518 taaactaagtcatctatgactatataccattttataacatatatttagtattattannnnnnnggtaaaatccattgattttgattgcgatttgatgatt 617  Q
    |||||| |||||| ||||||||||||| | || ||||||||||||||| |||||         |||||||||||| ||||||||||||||||| |  | |    
T  8952 taaactgagtcatttatgactatatacaactt-ataacatatatttagcattatctttgttttggtaaaatccatcgattttgattgcgattttacaagt 8854  T
Q  618 tcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||| |||||||| |||| || ||||||||||||||||||||||||    
T  8853 tcttatatctattctacaaaagtagttgagtaaaatccttcgattttgatt 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 460
Target Start/End: Complemental strand, 9153 - 9070
Alignment:
Q  377 aatcattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatag 460  Q
    |||||||||||||||||||||||  |||||  ||||||  ||||||||| || ||| |||||||||||||||||||||||||||    
T  9153 aatcattgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatag 9070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 50; Significance: 3e-19; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 473
Target Start/End: Complemental strand, 48918 - 48825
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaa 473  Q
    ||||||||| ||||| | ||| |||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||    
T  48918 cattgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 583 - 668
Target Start/End: Complemental strand, 48591 - 48506
Alignment:
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||| ||||| ||||||||| ||||||| | || ||||| |||| |||||||| |||| ||  |||||||||||||||||||||||    
T  48591 taaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatccttcgattttgatt 48506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 668
Target Start/End: Complemental strand, 61243 - 61158
Alignment:
Q  583 taaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||| ||||| ||||||| || |||||| | |||||| |||||| |||||||| |||| ||  |||||||| ||||||||||||||    
T  61243 taaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattcttcgattttgatt 61158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 475
Target Start/End: Complemental strand, 61472 - 61418
Alignment:
Q  421 ttttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaata 475  Q
    |||||||||||| ||| |||||||||  |||||||||||  ||||||||||||||    
T  61472 ttttgcgactttattcgccttcaacggttcaaatccatatgagaatcccaaaata 61418  T

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Target: scaffold0016 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 581 - 668
Target Start/End: Complemental strand, 56356 - 56269
Alignment:
Q  581 ggtaaaatccattgattttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    |||||||||||| ||||||||||||||||| |  ||||| |||||| |||||||| ||||  | ||||||||||||||||||||||||    
T  56356 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgatt 56269  T

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Target: scaffold0016; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 546
Target Start/End: Complemental strand, 58790 - 58746
Alignment:
Q  502 attttacgatttcttataaactaagtcatctatgactatatacca 546  Q
    |||||||||||||||||||||||| |||| |||||||||||||||    
T  58790 attttacgatttcttataaactaaatcatttatgactatatacca 58746  T

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Target: scaffold0036 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 380 - 485
Target Start/End: Complemental strand, 37296 - 37191
Alignment:
Q  380 cattgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaa 479  Q
    ||||||||||||||| | ||| |||||  |||||||||| ||||||| | ||| |||||||||||| |||||||||||||| ||||||  |||||||  |    
T  37296 cattgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggta 37197  T
Q  480 aaatcc 485  Q
    ||||||    
T  37196 aaatcc 37191  T

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Target: scaffold0115 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 466
Target Start/End: Complemental strand, 35188 - 35103
Alignment:
Q  381 attgttgtcaaaatcctgacctaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaat 466  Q
    |||||||||||||||  ||| ||||| ||||||||||  ||||||  ||||| |||||||| |||||||||||| ||| |||||||    
T  35188 attgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

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Target: scaffold0534 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 598 - 668
Target Start/End: Original strand, 885 - 955
Alignment:
Q  598 ttgattgcgatttgatgatttcttatatcaattctacagaagtggtcgagtaaaatccttcgattttgatt 668  Q
    ||||||||||||| |  ||||||||||||  ||||||| |||| || ||||||||| ||||||||||||||    
T  885 ttgattgcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgatt 955  T

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Target: scaffold1892 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1892
Description:

Target: scaffold1892; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 419 - 484
Target Start/End: Original strand, 886 - 951
Alignment:
Q  419 gattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagaaaaaatc 484  Q
    ||||||||||||||  | | ||||||| ||||||||| |||| ||||||||||||||| |||||||    
T  886 gattttgcgactttacttatcttcaacaactcaaatcgatagcagaatcccaaaataggaaaaatc 951  T

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