View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14100_low_23 (Length: 219)
Name: NF14100_low_23
Description: NF14100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14100_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 2946874 - 2947088
Alignment:
| Q |
1 |
ccaaaagccaggaaatgtttggtagcaccactcggttccattccctgtagaccatttctttttggatcacaaaattgtaaaagaatggacatgatagact |
100 |
Q |
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| T |
2946874 |
ccaaaagccaggaaatgtttggtagcaccactcggttccattccctgtagaccatttctttttggatcacaaaattgtaaaagaatggacatgatagact |
2946973 |
T |
|
| Q |
101 |
agcatctaagttacttgaatgtttatttatagtacttgctaaagaagctaactacattactttttgagattctttgaagcaactagctttgaaaagatgg |
200 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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|
| T |
2946974 |
agcatctaagttacttaaatgtttatttatagtacttgctaaagaagctaactacattactttttgagattctttgaagcaactaactttgaaaagatgg |
2947073 |
T |
|
| Q |
201 |
aaagaaaatgagaga |
215 |
Q |
| |
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||||||||||||||| |
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| T |
2947074 |
aaagaaaatgagaga |
2947088 |
T |
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