View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14105_high_11 (Length: 277)
Name: NF14105_high_11
Description: NF14105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14105_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 9 - 259
Target Start/End: Original strand, 45303972 - 45304213
Alignment:
| Q |
9 |
agcaaaggtgtgaaggtgagggttgtcttgtttgttttggtggtctctcaatttcatttcatttcatagaaagaagaataatggaatgggggagtgccca |
108 |
Q |
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| T |
45303972 |
agcaaaggtgtgaaggtgagggttgtc----ttgttttggtggtctctaa-----atttcatttcatagaaagaagaataatggaatgggggagtgccca |
45304062 |
T |
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| Q |
109 |
aaagctactgacttgacttgaatgaatatgcacaagccccaaaagcccagctaagtttcataacagcagccccgacagaaaggaagtaatgcagctttta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
45304063 |
aaagctactgacttgacttgaatgaatatgcacaagccccaaaagcccagctaagtttcataacagcagccccgacagaaaggaaggaatgcagctttta |
45304162 |
T |
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| Q |
209 |
ggacccttttcatttcccaacaaattactactacaacgaaaccttttcttt |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45304163 |
ggacccttttcatttcccaacaaattactactacaacgaaaccttttcttt |
45304213 |
T |
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