View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14105_low_13 (Length: 282)
Name: NF14105_low_13
Description: NF14105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14105_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 262
Target Start/End: Complemental strand, 27834759 - 27834498
Alignment:
| Q |
1 |
tggtgctgagggaatgatttatgctgattgtgatctcggatttgtcatgattcttttatgcaaaaaaacttgagtccnnnnnnnngaatattatgtaaag |
100 |
Q |
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| T |
27834759 |
tggtgctgagggaatgatttatgctgattgtgatctcggatttgtcatgattcttttatgtaaaaaaacttgagtccaaaaaaaagaatattatgtaaag |
27834660 |
T |
|
| Q |
101 |
aagttaatgtgaaattataaataaatcattattgtgtgcaatctaaactgcagtacattgtaagtatgtggtccctaactacgttaataagagtgttgca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27834659 |
aagttaatgtgaaattataaataaatcattattgtgtgcaatctaaactgcagtacattgtaagtatgtggtccctaactacgttaataagagtgttgca |
27834560 |
T |
|
| Q |
201 |
tcaaatgatagccagacataccatttaggaaacatggtcatatatttgttcaactaaaaact |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27834559 |
tcaaatgatagccagacataccatttaggaaacatggtcatatatttgttcaactaaaaact |
27834498 |
T |
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