View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14106_low_7 (Length: 206)

Name: NF14106_low_7
Description: NF14106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14106_low_7
NF14106_low_7
[»] chr5 (23 HSPs)
chr5 (11-193)||(7796904-7797086)
chr5 (11-193)||(13563968-13564150)
chr5 (9-193)||(33994713-33994897)
chr5 (11-193)||(27863730-27863912)
chr5 (11-193)||(28882315-28882497)
chr5 (11-193)||(38856042-38856224)
chr5 (11-193)||(11029334-11029516)
chr5 (11-193)||(14280542-14280724)
chr5 (11-193)||(37814909-37815091)
chr5 (11-193)||(34122865-34123047)
chr5 (11-193)||(25890321-25890503)
chr5 (14-193)||(24050366-24050547)
chr5 (14-193)||(24053493-24053672)
chr5 (13-193)||(1039356-1039535)
chr5 (11-134)||(34079754-34079877)
chr5 (33-192)||(28387821-28387979)
chr5 (11-193)||(4196843-4197023)
chr5 (11-114)||(7017838-7017941)
chr5 (14-193)||(30352760-30352939)
chr5 (63-193)||(43179429-43179559)
chr5 (11-143)||(25877959-25878089)
chr5 (11-143)||(6267801-6267932)
chr5 (139-193)||(7017953-7018007)
[»] chr8 (21 HSPs)
chr8 (11-193)||(43376843-43377025)
chr8 (11-193)||(35962634-35962816)
chr8 (11-193)||(23924292-23924474)
chr8 (11-193)||(31959611-31959793)
chr8 (14-193)||(7171881-7172060)
chr8 (11-193)||(2124521-2124703)
chr8 (11-193)||(22588006-22588188)
chr8 (11-193)||(30301462-30301644)
chr8 (11-193)||(32375979-32376161)
chr8 (11-193)||(39784-39966)
chr8 (11-193)||(7344120-7344302)
chr8 (11-193)||(8419732-8419914)
chr8 (21-193)||(41744160-41744332)
chr8 (11-193)||(43679723-43679905)
chr8 (11-193)||(22661138-22661320)
chr8 (14-170)||(4867380-4867536)
chr8 (11-97)||(39751387-39751473)
chr8 (89-188)||(39751659-39751758)
chr8 (11-78)||(20548938-20549005)
chr8 (51-179)||(31281179-31281305)
chr8 (11-152)||(30972479-30972620)
[»] chr7 (15 HSPs)
chr7 (11-193)||(47742553-47742735)
chr7 (11-193)||(15069914-15070096)
chr7 (11-193)||(18109357-18109539)
chr7 (11-188)||(34622825-34623002)
chr7 (11-193)||(604106-604288)
chr7 (11-193)||(42503402-42503584)
chr7 (21-193)||(29592839-29593011)
chr7 (11-193)||(19044633-19044815)
chr7 (11-193)||(20709821-20710003)
chr7 (11-193)||(43620007-43620189)
chr7 (11-193)||(45767424-45767606)
chr7 (11-193)||(30790570-30790752)
chr7 (14-192)||(10705587-10705765)
chr7 (11-193)||(47064858-47065040)
chr7 (14-190)||(12111555-12111729)
[»] chr2 (27 HSPs)
chr2 (11-193)||(41181737-41181919)
chr2 (14-193)||(43944031-43944210)
chr2 (11-193)||(3795677-3795859)
chr2 (14-192)||(12905859-12906037)
chr2 (11-193)||(45479385-45479567)
chr2 (11-193)||(28342849-28343032)
chr2 (11-193)||(1096910-1097092)
chr2 (11-193)||(39798004-39798186)
chr2 (11-193)||(24601980-24602160)
chr2 (11-193)||(24611954-24612134)
chr2 (11-193)||(5351295-5351477)
chr2 (11-193)||(10620301-10620483)
chr2 (11-193)||(41564054-41564236)
chr2 (11-193)||(9659604-9659788)
chr2 (11-193)||(209312-209494)
chr2 (11-193)||(7267008-7267190)
chr2 (11-193)||(24753588-24753770)
chr2 (11-193)||(1150595-1150777)
chr2 (11-193)||(439374-439556)
chr2 (11-193)||(81814-81996)
chr2 (11-193)||(41052962-41053142)
chr2 (14-193)||(41004866-41005045)
chr2 (88-193)||(38949750-38949855)
chr2 (11-91)||(38950232-38950312)
chr2 (15-179)||(25613533-25613697)
chr2 (11-58)||(18000560-18000607)
chr2 (87-148)||(43668499-43668560)
[»] chr6 (16 HSPs)
chr6 (14-193)||(29667387-29667566)
chr6 (11-193)||(25140669-25140852)
chr6 (11-193)||(23959217-23959399)
chr6 (11-188)||(2051368-2051545)
chr6 (11-193)||(7537527-7537709)
chr6 (11-193)||(29286529-29286711)
chr6 (11-193)||(1608621-1608803)
chr6 (11-193)||(13382968-13383150)
chr6 (11-193)||(31150629-31150811)
chr6 (11-193)||(28362281-28362463)
chr6 (11-193)||(18609797-18609979)
chr6 (11-193)||(2259412-2259593)
chr6 (11-140)||(34230807-34230936)
chr6 (51-152)||(20448393-20448493)
chr6 (65-152)||(19129549-19129637)
chr6 (11-52)||(18351348-18351389)
[»] chr1 (28 HSPs)
chr1 (11-193)||(44469575-44469757)
chr1 (11-193)||(50113648-50113830)
chr1 (14-193)||(1655644-1655823)
chr1 (11-193)||(37018960-37019142)
chr1 (11-193)||(6558228-6558410)
chr1 (11-193)||(9710904-9711086)
chr1 (11-193)||(12643532-12643714)
chr1 (9-193)||(25039645-25039829)
chr1 (22-193)||(7966327-7966497)
chr1 (11-193)||(29352560-29352742)
chr1 (17-193)||(30909593-30909769)
chr1 (11-193)||(3944302-3944484)
chr1 (11-193)||(38771958-38772140)
chr1 (14-193)||(19495382-19495562)
chr1 (14-193)||(13177690-13177869)
chr1 (11-193)||(3993406-3993588)
chr1 (11-193)||(13633436-13633618)
chr1 (11-192)||(5141435-5141616)
chr1 (11-192)||(20353500-20353681)
chr1 (14-191)||(36072702-36072879)
chr1 (14-193)||(33168243-33168422)
chr1 (11-193)||(8459284-8459466)
chr1 (17-193)||(5081928-5082104)
chr1 (11-193)||(51666230-51666412)
chr1 (11-193)||(38690236-38690417)
chr1 (14-193)||(46978798-46978977)
chr1 (14-192)||(4517959-4518135)
chr1 (11-52)||(15051053-15051094)
[»] chr4 (17 HSPs)
chr4 (11-192)||(37394768-37394949)
chr4 (11-193)||(10374366-10374548)
chr4 (14-193)||(4774168-4774347)
chr4 (11-193)||(3407803-3407985)
chr4 (11-187)||(44050650-44050825)
chr4 (11-193)||(19069527-19069709)
chr4 (11-193)||(49564169-49564351)
chr4 (11-193)||(10422972-10423154)
chr4 (14-193)||(18578962-18579141)
chr4 (14-193)||(24415498-24415679)
chr4 (20-193)||(11506658-11506831)
chr4 (11-193)||(38460752-38460934)
chr4 (21-152)||(6186995-6187126)
chr4 (11-101)||(50904819-50904909)
chr4 (14-141)||(30043039-30043166)
chr4 (14-91)||(51642346-51642423)
chr4 (15-148)||(31598821-31598954)
[»] scaffold0494 (1 HSPs)
scaffold0494 (11-193)||(4890-5072)
[»] chr3 (19 HSPs)
chr3 (11-193)||(6489670-6489852)
chr3 (11-193)||(2743782-2743964)
chr3 (11-193)||(46989853-46990035)
chr3 (11-193)||(9426932-9427114)
chr3 (11-193)||(14402569-14402751)
chr3 (11-193)||(48246738-48246920)
chr3 (11-193)||(50957243-50957425)
chr3 (11-193)||(8156836-8157018)
chr3 (11-193)||(13743593-13743775)
chr3 (11-193)||(30943518-30943700)
chr3 (11-193)||(2857546-2857728)
chr3 (11-193)||(3952778-3952960)
chr3 (11-193)||(4002055-4002237)
chr3 (11-193)||(36813178-36813360)
chr3 (11-190)||(21952126-21952305)
chr3 (11-193)||(6744890-6745072)
chr3 (14-193)||(67213-67392)
chr3 (11-63)||(7841422-7841474)
chr3 (87-151)||(14013652-14013716)
[»] scaffold0116 (1 HSPs)
scaffold0116 (11-193)||(15519-15701)
[»] scaffold0201 (1 HSPs)
scaffold0201 (11-193)||(22741-22923)
[»] scaffold0169 (1 HSPs)
scaffold0169 (43-193)||(10828-10978)
[»] scaffold0794 (1 HSPs)
scaffold0794 (20-193)||(1315-1488)
[»] scaffold0219 (2 HSPs)
scaffold0219 (11-111)||(19743-19843)
scaffold0219 (109-193)||(19498-19582)
[»] scaffold0513 (1 HSPs)
scaffold0513 (11-87)||(8526-8602)
[»] scaffold0057 (1 HSPs)
scaffold0057 (14-190)||(21977-22144)


Alignment Details
Target: chr5 (Bit Score: 159; Significance: 7e-85; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 7796904 - 7797086
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
7796904 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 7797003  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
7797004 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 7797086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 13563968 - 13564150
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
13563968 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggatcgaacatacatatataatatattatcttccaccat 13564067  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| ||||| || | |||||| ||| ||||||||||||||||||||||||||||||||||||    
13564068 attccgaaacataaatccgacgtcgctatcatcgcaaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 33994897 - 33994713
Alignment:
9 cataaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
33994897 cataaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccacc 33994798  T
109 atattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||  ||||||||||||||||||| |||||||| |||||||| ||| |||||||| |||||||| ||||||||||||||||||    
33994797 atattaagaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttgtccatgcgtattcatctc 33994713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 27863730 - 27863912
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
27863730 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatatattatcttccaccat 27863829  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||| |||||||||||||||||| || ||||| ||||||||  || ||||||||||||||||||| ||||||||||||||||    
27863830 attccaaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 27863912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 28882315 - 28882497
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
28882315 taaactactcattacacatcattaaattaaatccccacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 28882414  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| | ||||||  |||||||||||||||||||||||||||||||||||||||    
28882415 attccgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaatgcatatagcttgccgttttccatgcgtattcatctc 28882497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 38856042 - 38856224
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
38856042 taaactactcattacacatcattaaattcaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 38856141  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
38856142 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38856224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 11029334 - 11029516
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||    
11029334 taaactactcatcacacatcattaaattaaatccctacttacattcaacgcaattacatatgaaacgaacatacatatataatatattatcttccaccat 11029433  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
11029434 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 11029516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 14280724 - 14280542
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
14280724 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 14280625  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
14280624 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 14280542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 37814909 - 37815091
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
37814909 taaactactcattacacatcattaaattaaatccctacttactttcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 37815008  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  |||||  |||||||  || ||||||||||||||||||||||||||||||||||||    
37815009 attccgaaacataaatccgacgtcgccgtcgtcgtgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 37815091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 34122865 - 34123047
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||    
34122865 taaacaactcattacacatcattaaattaaattcatacttacattcaatgcaattgcatatggaacgaacatatatatataatatattatcttccaccat 34122964  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| |||||||||||| |||||| |||||||| |||||||| ||| ||||||| ||| ||||||||||||||||||||||||    
34122965 attctgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttaccgttttccatgcgtattcatctc 34123047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 25890321 - 25890503
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
25890321 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccat 25890420  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| |||||||||||||||||||    ||||| ||||||||  || |||||| |||||| |||||||| |||||||||||||    
25890421 attctgaaacataaatccgacgtcgacgtcgtcgcgaataagcaaaggcatatcgcttgctgttttccacgcgtattcatctc 25890503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 24050366 - 24050547
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata--atatattatcttccatcata 111  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||| ||||    
24050366 acaactcattacacatcattaaattatatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatattatcttccaccata 24050465  T
112 ttccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||||||||| ||||||||   |||  | ||| ||||||||||||||||||||||||||||||||||||    
24050466 ttctgaaacataaatccgacgtcgctatcgtcttcaattcgccaaggcatatagcttgccgttttccatgcgtattcatctc 24050547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 24053493 - 24053672
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
24053493 acaactcattacacatcattaaattatatccctaattacattcaacgcaattgcatatagaaagaacatacatatataatatattatcttccaccatatt 24053592  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    | ||||||||||||||||||| ||||||||   |||  | ||| |||||||||||| |||||||||||||||||||||||    
24053593 ctgaaacataaatccgacgtcgctatcgtcttcaattcgccaaggcatatagcttgtcgttttccatgcgtattcatctc 24053672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 13 - 193
Target Start/End: Complemental strand, 1039535 - 1039356
Alignment:
13 aacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatat 112  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||| |||||    
1039535 aacaactcattacatatcattaaattaaatccctacttacattcaacgcaactgcatatggtacgaacatacatatataacatattattttccaccatat 1039436  T
113 tccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| |||||||||||||| ||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
1039435 tcc-aaacataaatccgatgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 1039356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 34079877 - 34079754
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
34079877 taaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 34079778  T
111 attccgaaacataaatccgacgtc 134  Q
    |||| |||||||||||||| ||||    
34079777 attctgaaacataaatccgccgtc 34079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 28387979 - 28387821
Alignment:
33 taaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacg 132  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
28387979 taaattaaatccctacttacaatcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatctgacg 28387880  T
133 tcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    || ||||||||  ||||||   || ||||||| |||| ||||||||||| ||||||||||    
28387879 tcgctatcgtcgtgaataa-caaaggcatataacttgtcgttttccatgtgtattcatct 28387821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 4196843 - 4197023
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||| || |||| |||||||||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||| ||| | |||    
4196843 taaacaactcattacatatgattatattaaatccctacttacattcatcacaattgcatatggaacgaa--tacatatataatatattattttcgaccat 4196940  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| ||||||||   |||||| ||| |||| ||||||| |||||||||||| ||||||||||    
4196941 attccgaaacataaatctgacgtcgctatcgtctttaataagccaaggcatgtagcttgtcgttttccatgcatattcatctc 4197023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 7017838 - 7017941
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
7017838 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 7017937  T
111 attc 114  Q
    ||||    
7017938 attc 7017941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 30352760 - 30352939
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||| |||| |||||||||||  ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||| |||||  |||||    
30352760 acaactcattacatatcaataaattaaatctttacttacattcaatgcaattgcatatggaaaaaacatacatatataatatattattttccacaatatt 30352859  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||| ||||||| ||||||||   || ||| ||| ||||||| ||||||||||| ||||| ||||||||||    
30352860 ccgaaacataaatacgacgtcgctatcgtctttaacaagccaaggcatataacttgccgtttttcatgcatattcatctc 30352939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 63 - 193
Target Start/End: Complemental strand, 43179559 - 43179429
Alignment:
63 attgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcata 162  Q
    |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||||| |||||||| ||| |||||    
43179559 attgcagatggaacgaacatacatatataatatattatcttccaccatattccgaaacataaatcaaacgtcgctatcgtcgcgaataagccaaggcata 43179460  T
163 tagcttgccgttttccatgcgtattcatctc 193  Q
    |||||| ||||||||||||||| ||||||||    
43179459 tagcttaccgttttccatgcgtgttcatctc 43179429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 25877959 - 25878089
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||| | |||| ||||||||||||||||||  || | |||||||||||||||| ||||||||||||||||||||||| ||||| |||    
25877959 taaacaactcattacacgtgattatattaaatccctacttaca--catcacaattgcatatggaacaaacatacatatataatatattattttccaccat 25878056  T
111 attccgaaacataaatccgacgtcactatcgtc 143  Q
    |||||||||||||||||||||||| ||||||||    
25878057 attccgaaacataaatccgacgtcgctatcgtc 25878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 143
Target Start/End: Original strand, 6267801 - 6267932
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||||| ||||| ||||| ||||||| || ||||||||||||||||||||||||||||||    
6267801 taaacaacacattacatatcattaaattaaatctctactgacattctacgcagttgcagatggaacaaaaatacatatataatatattatcttccatcat 6267900  T
111 attccgaaacataaatccgacgtcactatcgtc 143  Q
    |||||| ||||||||| ||||||| | ||||||    
6267901 attccg-aacataaattcgacgtcgccatcgtc 6267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 7017953 - 7018007
Alignment:
139 tcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||| ||||||||  || |||||||||||||| ||||||||| |||||||||||    
7017953 tcgtcgcgaataagcaaaggcatatagcttgccattttccatgtgtattcatctc 7018007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 43377025 - 43376843
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
43377025 taaacaactcattacacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 43376926  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||||    
43376925 attccgaaacataaatctgacgtcactatcgtcgcgaataaaccaatgcatatagcttgccgttttccatgcgtattcgtctc 43376843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 35962634 - 35962816
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
35962634 taaacaactcattgcacatcattaaattaaattcctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattatcttccaccat 35962733  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||    
35962734 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc 35962816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 23924292 - 23924474
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||    
23924292 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaactgcatatggaacgaacatacatatataatatattattttccaccat 23924391  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
23924392 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 23924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 31959793 - 31959611
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
31959793 taaacaactcattacacatcattaaattaaatccatacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccat 31959694  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||| |||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
31959693 attccaaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 31959611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 7172060 - 7171881
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
7172060 acaactcagtacacatcattaaattaaatctctacttacattcaatgcaattgcatatggaacgaacatacatatataatatattattttccaccatatt 7171961  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||| |||||| |||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||    
7171960 ccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccattttccatgcgtattcatctc 7171881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 2124521 - 2124703
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||    
2124521 taaacaactcattacacatcattaaattaagtccctacttacattcaacgcaattgcatatggaacgaaaatacatatataatatattatcttccaccat 2124620  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||| | ||| |||| ||| ||||||||  || ||||||||||||||||||||||||||||||| ||||    
2124621 attccgaaacataaatccaaagtcgctattgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcgtctc 2124703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 22588188 - 22588006
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
22588188 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccat 22588089  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| | |||||||||||||||||| ||||||||   ||| || |||  |||||||||||||||||||||||||||||||||||    
22588088 atttcaaaacataaatccgacgtcgctatcgtcttcaattagccaagacatatagcttgccgttttccatgcgtattcatctc 22588006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 30301462 - 30301644
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
30301462 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 30301561  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
30301562 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 30301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 32375979 - 32376161
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
32375979 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 32376078  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| | |||||| ||||||||  || |||||||||||||||||| |||||||||||||||||    
32376079 attccgaaacataaatccgacgtcgccatcgtcgcgaataagcaaaggcatatagcttgccgtttcccatgcgtattcatctc 32376161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 39784 - 39966
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
39784 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccat 39883  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||| || |  ||||  ||||||||  ||  ||||||||||| |||||||||||||||||||||||    
39884 attccgaaacataaatccgacatcgccgtcgttgcgaataagcaaagacatatagcttgtcgttttccatgcgtattcatctc 39966  T

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Target: chr8; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 7344302 - 7344120
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
7344302 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 7344203  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||  |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
7344202 attccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 7344120  T

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Target: chr8; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 8419732 - 8419914
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||| ||||||| |||    
8419732 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacgtacatatataatatattgtcttccaccat 8419831  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
8419832 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8419914  T

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Target: chr8; HSP #13
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 41744160 - 41744332
Alignment:
21 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaac 120  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||     
41744160 attacacatcattaaattaagtccctacttacattcaacgcaattgcatatggagcgaatatacatatataatatattatcttccaccatattccgaaat 41744259  T
121 ataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||| ||||||||| ||||||| ||| ||||||| |||| |||||||||||||||||||||||    
41744260 ataaatccgacgtcgctatcgtcatgaataagccaaggcatataacttgtcgttttccatgcgtattcatctc 41744332  T

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Target: chr8; HSP #14
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 43679723 - 43679905
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||    
43679723 taaacaactcattacacatcattatattaaatccctgcttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccat 43679822  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| ||||||||   |||||||||| ||||||| |||| |||||||||||||| ||||||||    
43679823 attccgaaacataaatctgacgtctctatcgtctttaataagtcaaggcatataacttgtcgttttccatgcgtgttcatctc 43679905  T

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Target: chr8; HSP #15
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 22661320 - 22661138
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||| ||| |||||||||||| ||||| ||||||  |||| |||||||||||||||||||||||||||||||||| |||||||| |||    
22661320 taaacaacacattacatatcgttaaattaaatctctactgacattctgcgcagttgcatatggaacgaacatacatatataatatatcatcttccaccat 22661221  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||| | |||||||| ||||||||  ||||||| ||| |||||| |||||||||||||||||| ||||||||||    
22661220 attccgaaacatagacccgacgtcgctatcgtcgtgaataagccaaggcatatggcttgccgttttccatgcatattcatctc 22661138  T

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Target: chr8; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 4867536 - 4867380
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| |||| |    
4867536 acaactcattacttatcattaaattaaatccctacttacattcaacgcaattggatatggaacgaacatacgtatataatatattattttccaccataat 4867437  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgc 170  Q
    |||||||||||||||||||||  |||| || |||||||| ||||||| |||| ||||    
4867436 ccgaaacataaatccgacgtcgttatcatctcgaataagccaatgcacataggttgc 4867380  T

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Target: chr8; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 39751387 - 39751473
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatat 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
39751387 taaacaactcattacacatcattaaattaaatccctacttacattcaacgtaattgcatatggaacgaacatacatatataatatat 39751473  T

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Target: chr8; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 39751659 - 39751758
Alignment:
89 ataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattc 188  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||| |||  ||||||| ||||||||||||||||||||||    
39751659 ataatatattatcttctaccatattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagtttgccgttttccatgcgtattc 39751758  T

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Target: chr8; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 20549005 - 20548938
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacga 78  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
20549005 taaacaactcattacacatcattaaattaaatccttacttacattcaacgcaattgcatatggaacga 20548938  T

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Target: chr8; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 51 - 179
Target Start/End: Original strand, 31281179 - 31281305
Alignment:
51 acattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaata 150  Q
    |||||| |||||  |||| |||||||||||||| | |||||||||||||||||| | ||||||| ||||||||||||| ||||  |||||||||||||||    
31281179 acattctacgcacgtgcagatggaacgaacataaagatataatatattatcttcaaccatattctgaaacataaatcctacgt--ctatcgtcacgaata 31281276  T
151 agtcaatgcatatagcttgccgttttcca 179  Q
    || |||||| ||||  | |||||||||||    
31281277 agccaatgcttataaatcgccgttttcca 31281305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 30972620 - 30972479
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||||||||||| || ||||  |||   |||||| |||||  |||| ||||||| |||| |||||||||||||||||||||| | |||    
30972620 taaacaacacattacacatcattacataaaatatctatcgacattctacgcatgtgcaaatggaacaaacacacatatataatatattatcttcaaccat 30972521  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataag 152  Q
    ||  | |||||||| |   ||||||||||| ||||| |||||    
30972520 atgtctaaacataagtgaaacgtcactatcatcacggataag 30972479  T

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Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 47742735 - 47742553
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
47742735 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 47742636  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| | |||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||    
47742635 attccgaaacataaatccgacgtcgccatcgtcgcgaataagccaaggcatatagcttgtcgttttccatgcgtattcatctc 47742553  T

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Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 15070096 - 15069914
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
15070096 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 15069997  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
15069996 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 15069914  T

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Target: chr7; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 18109539 - 18109357
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
18109539 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 18109440  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
18109439 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 18109357  T

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Target: chr7; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 34622825 - 34623002
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
34622825 taaacaactcattacacatcattaaattaaacttctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccatcat 34622924  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattc 188  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
34622925 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattc 34623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 604106 - 604288
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
604106 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccat 604205  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
604206 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 604288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 42503584 - 42503402
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
42503584 taaactactcattacacatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccat 42503485  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || |||| |||||||||||||||||||||||||||||||    
42503484 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatgtagcttgccgttttccatgcgtattcatctc 42503402  T

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Target: chr7; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 193
Target Start/End: Original strand, 29592839 - 29593011
Alignment:
21 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaac 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
29592839 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatgtattatcttccaccatattccgaaac 29592938  T
121 ataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||| |||||| |||||||  |||||||| ||| ||||||| ||||||||||||||||||||||||||||    
29592939 ataaatctgacgtcgctatcgttgcgaataagccaaggcatataacttgccgttttccatgcgtattcatctc 29593011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 19044633 - 19044815
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
19044633 taaacaaatcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 19044732  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||| |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||| ||||| ||||    
19044733 atttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttccatgcatattcttctc 19044815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 20710003 - 20709821
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
20710003 taaacaaatcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 20709904  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||| |||||| |||||||| |||||||| ||| ||||||| ||||||||||||||||| ||||| ||||    
20709903 atttcgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatataacttgccgttttccatgcatattcttctc 20709821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 43620007 - 43620189
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
43620007 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 43620106  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
43620107 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 43620189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 45767606 - 45767424
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
45767606 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 45767507  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
45767506 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 45767424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 30790752 - 30790570
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
30790752 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 30790653  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||| ||||||||||||||||||||||    
30790652 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30790570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 10705587 - 10705765
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
10705587 acaactcattacacatcaataaattaaatctctacttacattcaacgcaattgcatatagaacgaacatacatatataatatatcatcttccaccatatt 10705686  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    | ||||||||||||||||||| ||||||||   ||| || ||| |||||||||||| ||||||||||||||||||||||    
10705687 ctgaaacataaatccgacgtcgctatcgtcttcaattagccaaggcatatagcttgtcgttttccatgcgtattcatct 10705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 47065040 - 47064858
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||    
47065040 taaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccat 47064941  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||  |||||| ||||| ||   |||||  ||| ||||||||||||||||||||||||||||||||||||    
47064940 atttcgaaacataaatttgacgtcgctatcatctttaataaaccaaggcatatagcttgccgttttccatgcgtattcatctc 47064858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 12111555 - 12111729
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||| ||||| ||||||    
12111555 acaactcattacatatcattaaattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatata--atattattttccaccatatt 12111652  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcat 190  Q
    |||||| |||||||||||||| ||||| ||   |||||  ||| |||||||||||| ||||||||||| ||||||||    
12111653 ccgaaatataaatccgacgtcgctatcatctttaataaaccaaggcatatagcttgtcgttttccatgtgtattcat 12111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 155; Significance: 2e-82; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 41181737 - 41181919
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
41181737 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 41181836  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||    
41181837 attccgaaacataaatccgacgtcgctatcgtcgcgtataagccaatgcatatagcttgccgttttccatgcgtattcgtctc 41181919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 43944031 - 43944210
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
43944031 acaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatatattatattatcttccaccatatt 43944130  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||    
43944131 ccgaaacataaatctgacgtcgctatcatcgcgaataagccaatgcatatagcttgccgttttccatgcgtattcatctc 43944210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 3795677 - 3795859
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
3795677 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 3795776  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||||||||| |  ||||||||||||||  || ||||||||||||||||||||||||||||||||||||    
3795777 attctgaaacataaatccgacgtcgccgtcgtcacgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3795859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 14 - 192
Target Start/End: Original strand, 12905859 - 12906037
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
12905859 acaactcattacacatcattaaattaaatccgtacttacattcaacgcaattgcatatggaacaaacatacatatataatatattatcttccaccatatt 12905958  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    ||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||  |||||||||||||||||||||    
12905959 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgttgttttccatgcgtattcatct 12906037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 45479567 - 45479385
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
45479567 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 45479468  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||||||| |  ||||||| |||||||| ||| |||||||||||||||||||||||| |||||||||||    
45479467 attctgaaacataaatccgacgccgatatcgtcgcgaataagccaaggcatatagcttgccgttttccatgtgtattcatctc 45479385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 28342849 - 28343032
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
28342849 taaacaattcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 28342948  T
111 attccg-aaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||| |||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||| |||| |||||| ||||    
28342949 attccgaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttacatgtgtattcgtctc 28343032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 1096910 - 1097092
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
1096910 taaacaactcattacatatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 1097009  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||| ||||||| |||||||| | |||||| | | ||||||| ||||||||||||||||||||||| ||||    
1097010 attccgaaacataaattcgacgtcgctatcgtcgcaaataagcccaagcatataacttgccgttttccatgcgtattcgtctc 1097092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 39798186 - 39798004
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
39798186 taaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 39798087  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
39798086 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 39798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 24601980 - 24602160
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||    
24601980 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccat 24602077  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||| |||||||||||||  |||||||| |||||||| ||| ||||||||||||||||||||||| ||||||| ||||    
24602078 attccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatccgtattcgtctc 24602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 24612134 - 24611954
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||    
24612134 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacat--atatataatatattatcttccaccat 24612037  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||| |||||||||||||  |||||||| |||||||| ||| ||||||||||||||||||||||| ||||||| ||||    
24612036 attccgaaaaataaatccgacgttgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatccgtattcgtctc 24611954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 5351477 - 5351295
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
5351477 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 5351378  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
5351377 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 5351295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 10620301 - 10620483
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
10620301 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 10620400  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
10620401 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 10620483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 41564236 - 41564054
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
41564236 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 41564137  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
41564136 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 41564054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 9659788 - 9659604
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataa--tatattatcttccatc 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||  |||||||||||||| |    
9659788 taaacaactcattacacatcattaaattaaatacctacttacattcaacgcaattgcatattgaacgaacatacaaatataaaatatattatcttccacc 9659689  T
109 atattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||  ||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
9659688 atattccgaaacataaactcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 9659604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 209312 - 209494
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
209312 taaactactcattacacatcattaaattaaatccatacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 209411  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
209412 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 209494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 7267190 - 7267008
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
7267190 taaactactcattacacatcattaaattaaatctctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 7267091  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || | |||||||||| |||||||||||||||||||||||    
7267090 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggtatatagcttgtcgttttccatgcgtattcatctc 7267008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 24753770 - 24753588
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||    
24753770 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacaaacatacatatataatatattattttccaccat 24753671  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||| ||| ||| |  ||||| ||||||||  || ||||||||||||||||||||||| ||||||||||||    
24753670 attccgaaacataaatacgatgtcgccgtcgtcgcgaataagcaaaagcatatagcttgccgttttccatacgtattcatctc 24753588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 1150777 - 1150595
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||    
1150777 taaacaattcattacacatcattaaattaaatcactacttacattcaatgaaattgcatatggaacgaacatacatatataatatagtatcttccatcat 1150678  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||| |||||||||||||||||| |||||||||| |||||  ||| || ||||| ||||||||||||||||||||| |||||    
1150677 attccaaaacataaatccgacgtcgctatcgtcacaaataaaccaaggcgtatagtttgccgttttccatgcgtatttatctc 1150595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 439556 - 439374
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||    
439556 taaacaactcattacacatgattatattaaatccctccttacattcatcacaattgcatatggaacgaacatacatatataatatattactttccaccat 439457  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| ||||||||   |||||| ||  ||||||||||||||||||||||||||||||||||||    
439456 attccgaaacataaatccgacgtcgctatcgtctttaataagccagggcatatagcttgccgttttccatgcgtattcatctc 439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 81996 - 81814
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| |||| ||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||| | |||    
81996 taaacaactcattacacatgattatattaaatgcatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttcaaccat 81897  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||||||  |||||||   |||||||||| | ||||||||||||||||||||||||||||||||||    
81896 attccgaaacataaatccgacgtcgttatcgtctttaataagtcaagggatatagcttgccgttttccatgcgtattcatctc 81814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 41052962 - 41053142
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatat--ggaacgaacatacatatataa-tatattatcttccat 107  Q
    ||||||| ||||||||||||||||||||     ||||||||||||||| ||||||||||||  |||||||||| |||||||||| ||||||||||||||     
41052962 taaacaattcattacacatcattaaatt-----cctacttacattcaatgcaattgcatatatggaacgaacacacatatataaatatattatcttccac 41053056  T
108 catattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||| ||||||| |||||||||| ||||    
41053057 catattccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttggcgttttcaatgcgtattcgtctc 41053142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 41004866 - 41005045
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||| ||||||||||||||||||||| || || || ||||||    
41004866 acaactcattacacatcattatattaaatcactacttacattcatcacaattgcatatggaatgaacatacatatataatatataatttttcaacatatt 41004965  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    | |||||||||||| |||||| | ||||||   |||||| ||  |||| ||||||| |||||||||||||||||||||||    
41004966 ctgaaacataaatctgacgtcccaatcgtctttaataagccagggcatgtagcttgtcgttttccatgcgtattcatctc 41005045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 88 - 193
Target Start/End: Complemental strand, 38949855 - 38949750
Alignment:
88 tataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtatt 187  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |  ||||| ||||||||  || ||||||| ||||||||||||||||||||||    
38949855 tataatatattatcttccaccatattccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgccgttttccatgcgtatt 38949756  T
188 catctc 193  Q
    ||||||    
38949755 catctc 38949750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 38950312 - 38950232
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
38950312 taaactactcattacacatcattaaattaaatccctacttacattcaacacaattacatatggaacgaacatacatatata 38950232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 25613533 - 25613697
Alignment:
15 caactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattc 114  Q
    |||| ||||||| ||||||| || ||||| ||| | |||||| | |||  |||| |||||||||||| | | |||||||||||||||||  || ||||||    
25613533 caacacattacatatcattacataaaatctctattgacattctatgcacatgcagatggaacgaacacaaagatataatatattatctttaattatattc 25613632  T
115 cgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttcca 179  Q
      |||||||||||| ||||| ||||||||||||||||||||| ||| |||||| |||||||||||    
25613633 ataaacataaatcctacgtcgctatcgtcacgaataagtcaaggcacatagctcgccgttttcca 25613697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 18000560 - 18000607
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaa 58  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
18000560 taaactactcattacacatcattaaattaaatccctacttacattcaa 18000607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 43668499 - 43668560
Alignment:
87 atataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaa 148  Q
    |||||||||||||||||| | ||||| || |||||||||||| |||||||||||||||||||    
43668499 atataatatattatcttcaaccatatgcctaaacataaatcctacgtcactatcgtcacgaa 43668560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 29667566 - 29667387
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
29667566 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattaacttccaccatatt 29667467  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||| ||| || ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
29667466 ccgaaacataaatctgacatcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 29667387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 25140852 - 25140669
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacat-atataatatattatcttccatca 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||    
25140852 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacattatataatatattatctttcacca 25140753  T
110 tattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||    
25140752 tattccgaaacataaatgcgacgtcgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgtgtattcgtctc 25140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 23959217 - 23959399
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||    
23959217 taaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttacaccat 23959316  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||| ||||| ||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||||||    
23959317 attccgaaacataaatccaacgtcgctatcgtcgtgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 23959399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 2051368 - 2051545
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
2051368 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 2051467  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattc 188  Q
    ||| |||||||||||||||||||| | |||||| |||||||| |||  |||||| |||||||||||||||||||||||    
2051468 atttcgaaacataaatccgacgtcgccatcgtcgcgaataagccaagacatataacttgccgttttccatgcgtattc 2051545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 7537527 - 7537709
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
7537527 taaacaaatcattgcacatcattaaattaaatccctacttacattcaacgcaaatgcatatggaacgaacatacatatataatatattatcttccaccat 7537626  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| ||||||| ||||| ||||||||||||||||| ||||    
7537627 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatataacttgctgttttccatgcgtattcgtctc 7537709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 29286529 - 29286711
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
29286529 taaacaactcattacacatcattaaattaaacctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 29286628  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||| |||||||| ||||||||||| ||| |||||| ||||    
29286629 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagtttgccgttttctatgtgtattcgtctc 29286711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 1608621 - 1608803
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
1608621 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 1608720  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
1608721 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 1608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 13382968 - 13383150
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
13382968 taaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 13383067  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||| |||| |||||||||||||||||||||||    
13383068 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataacttgacgttttccatgcgtattcatctc 13383150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 31150811 - 31150629
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | ||||||||||||||||||||||||||||| |||    
31150811 taaacaactcattacacatcattaaattaaatccctacatacattcaacgcaattgcatatcgatcaaacatacatatataatatattatcttccaccat 31150712  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||  |||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||    
31150711 attctaaaacataaatccgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccaagcgtattcatctc 31150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 28362463 - 28362281
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| || ||||||||||||||||||||||||||||||| |||    
28362463 taaacaactcattacacatcattaaattaaatccctacatacattctacacaattgcatatcgatcgaacatacatatataatatattatcttccaccat 28362364  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||| ||||||| ||||| || | |||||| ||| |||||||||||||| |||||||||| ||||||||||    
28362363 attctgaaacataaattcgacgtcgctatcatcgcaaataagccaaggcatatagcttgccattttccatgcttattcatctc 28362281  T

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Target: chr6; HSP #11
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 18609979 - 18609797
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||| |||    
18609979 taaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatataattttccaccat 18609880  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| ||||||||   |||||| ||| ||||||| |||| |||||||||||| |||| |||||    
18609879 attccgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatataacttgtcgttttccatgcatatttatctc 18609797  T

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Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 2259412 - 2259593
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| |||||||  | |||||||||||||| ||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||| ||||| |||    
2259412 taaacaacacattacaacttattaaattaaatccttacttacattcaacgta-ttgcatatggaacaaacatgcatatataatatattattttccaccat 2259510  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||| |||||| || |||||   |||||| |||||||||||||||| ||||||| |||||||||||||||    
2259511 atttcgaaacataaatctgacgtcgctttcgtctttaataagccaatgcatatagcttgtcgttttctatgcgtattcatctc 2259593  T

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Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 34230807 - 34230936
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||||||| |||||||||||| ||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||| | |||    
34230807 taaacaacacattacacatcgttaaattaaatctctactaacattctacacagttgcagatggaacgaacatacatatataatatattatcttctaccat 34230906  T
111 attccgaaacataaatccgacgtcactatc 140  Q
    ||||  ||||||||||| ||||||||||||    
34230907 attctaaaacataaatcggacgtcactatc 34230936  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 20448493 - 20448393
Alignment:
51 acattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaata 150  Q
    |||||| || || ||||| ||| ||| |||| ||||||||||||||||||||| || ||||| || ||||||||||   ||||| |||||||||||||||    
20448493 acattctacacatttgcaaatgtaacaaacacacatatataatatattatctt-caacatatacctaaacataaatgaaacgtcgctatcgtcacgaata 20448395  T
151 ag 152  Q
    ||    
20448394 ag 20448393  T

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Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 19129549 - 19129637
Alignment:
65 tgcatatggaac-gaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaataag 152  Q
    |||| ||||||| ||||| |||||||||||||||||| ||| ||||||| || ||||||||||   ||||| | |||||||||||||||    
19129549 tgcagatggaacagaacacacatatataatatattatattcaatcatatgcctaaacataaatgaaacgtcgcaatcgtcacgaataag 19129637  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 18351389 - 18351348
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttac 52  Q
    ||||| ||| ||||||||||||||||||||||||||||||||    
18351389 taaactacttattacacatcattaaattaaatccctacttac 18351348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 4e-80; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 44469757 - 44469575
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
44469757 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 44469658  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
44469657 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 44469575  T

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Target: chr1; HSP #2
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 50113648 - 50113830
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
50113648 taaacaactcattacacattattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccat 50113747  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
50113748 attccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 50113830  T

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Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 1655823 - 1655644
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
1655823 acaactcattacacatcattaaattaaatcattacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 1655724  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||| |||||||| |||||||| |||  |||||||||||||||||||||||||||||||||||    
1655723 ccgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgccgttttccatgcgtattcatctc 1655644  T

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Target: chr1; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 37019142 - 37018960
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
37019142 taaacaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 37019043  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||| | ||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
37019042 attccgaaacataaatcctatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 37018960  T

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Target: chr1; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 6558228 - 6558410
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
6558228 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 6558327  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
6558328 attctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 6558410  T

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Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 9710904 - 9711086
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||    
9710904 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaaagaacatacatatataatatattatctttcaccat 9711003  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| || ||||| ||||||||  || ||||||||||||||||||| ||||||||||||||||    
9711004 attccgaaacataaatccgacgtcgctgtcgtcgcgaataagcaaaggcatatagcttgccgtttttcatgcgtattcatctc 9711086  T

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Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 12643532 - 12643714
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
12643532 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccat 12643631  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
12643632 attctgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 12643714  T

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Target: chr1; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 25039829 - 25039645
Alignment:
9 cataaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatc 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |    
25039829 cataaacaacacattacacatcattaaattaaatccctacttacattcaacgcaattgtatatggaacgaacatacacatataatatattatcttccacc 25039730  T
109 atattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| ||| || |||||||||||||||||||||||||||||||||    
25039729 atattccgaaacataaatccgacgtcgttatcgacgcgaataagccaaggcgtatagcttgccgttttccatgcgtattcatctc 25039645  T

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Target: chr1; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 22 - 193
Target Start/End: Original strand, 7966327 - 7966497
Alignment:
22 ttacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaaca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
7966327 ttacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatgtaatatattatcttccaccatattccgaaaca 7966426  T
122 taaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||| |||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
7966427 taaatctgacgtcgctatcgtcgcgaataag-caaggcatatagcttgccgttttccatgcgtattcatctc 7966497  T

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Target: chr1; HSP #10
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 29352560 - 29352742
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||    
29352560 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattatcttccaccat 29352659  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
29352660 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 29352742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 30909769 - 30909593
Alignment:
17 actcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
30909769 actcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatgaaacgaacatacatatataatatattatcttccaccatattccg 30909670  T
117 aaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||| |  ||||| ||||||||  || ||||||||||||| ||||||||||||||||||||||    
30909669 aaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgctgttttccatgcgtattcatctc 30909593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 3944302 - 3944484
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
3944302 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 3944401  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
3944402 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3944484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 38771958 - 38772140
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
38771958 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 38772057  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||||||||  ||||| || |||||  || ||||||||||||||||||||||||||||||||||||    
38772058 attccgaaacataaatccgacgtcaccgtcgtcgcggataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 38772140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 19495382 - 19495562
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
19495382 acaagtcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattatcttccaccatatt 19495481  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccg-ttttccatgcgtattcatctc 193  Q
    ||||||||||||||| ||||| |||||||| |||||||| ||| ||||||||||||||| |||| ||| ||||||||||||    
19495482 ccgaaacataaatccaacgtcgctatcgtctcgaataagccaaggcatatagcttgccgttttttcatacgtattcatctc 19495562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 13177869 - 13177690
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
13177869 acaactcattacacattattaaattaaatccctacttactttcaatgcaattgcatatggaatgaacatacatatataatatattatcttccaccatatt 13177770  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||| |||||||  ||| |||| |||  |||||||||||||||||||||||||||||||||||    
13177769 ccgaaacataaatccgacgtcgctatcgttgcgattaagccaagccatatagcttgccgttttccatgcgtattcatctc 13177690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 3993588 - 3993406
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
3993588 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 3993489  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
3993488 attccgaaacataaatctgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3993406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 13633618 - 13633436
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||    
13633618 taaactactcattacacatcaataaattaaatccctacttacattcaacgcaattacatatggaacaaacatacatatataatatattatcttccaccat 13633519  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  || || ||||||||  || ||||||||||||||||||||||||||||||||||||    
13633518 attccgaaacataaatccgacgtcgccgtcatcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13633436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 5141616 - 5141435
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||| | ||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
5141616 taaacaacacattatatatcgttaaattaaatctctactgacattctacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 5141517  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    ||||||||||||| ||| |||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
5141516 attccgaaacatacatctgacgtcgctatcgtcgcgaataagccaacgcatatagcttgccgttttccatgcgtattcatct 5141435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 20353681 - 20353500
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
20353681 taaactactcattatacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 20353582  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || |||||||||||||||||||||||||||||||||||    
20353581 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatct 20353500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 36072702 - 36072879
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
36072702 acaactcattacacatcattaaattaaatctctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatatt 36072801  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatc 191  Q
    ||||||||||||||||||||| ||||| ||   ||| || ||| ||||||||||||  ||||||||||||||||||||    
36072802 ccgaaacataaatccgacgtcgctatcatcttcaattagccaaggcatatagcttgttgttttccatgcgtattcatc 36072879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 33168243 - 33168422
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||    
33168243 acaactcattacatatcattaaattaaatccctacttacactcaacgcaattacatatggaacgaacatacatatataatatattattttccaccatatt 33168342  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||| |||||| ||||||||   |||||||||| ||||||||||||  ||||||||||||||||||||||    
33168343 ccgaaacataaatctgacgtcgctatcgtctaaaataagtcaaggcatatagcttgttgttttccatgcgtattcatctc 33168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 8459284 - 8459466
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| | |||    
8459284 taaacaactcattacacatgattaaattaaatccctacttacattcaacgcaattacatatagaacgaacatacatgtataatatattatcttctaccat 8459383  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||  ||||||||||||||||||| |||||||| |||||||| |||  ||||||||||| |||||||||||||||||||||||    
8459384 attttgaaacataaatccgacgtcgctatcgtcgcgaataagccaagacatatagcttgtcgttttccatgcgtattcatctc 8459466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 5082104 - 5081928
Alignment:
17 actcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccg 116  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
5082104 actccttacacatcattaaattaaatccatatttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccatattccg 5082005  T
117 aaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||| |  ||||| ||||||||  || ||||||| |||| |||||||||||||||||||||||    
5082004 aaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatataccttgtcgttttccatgcgtattcatctc 5081928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 51666412 - 51666230
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||    
51666412 taaacaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccat 51666313  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||| ||||||| ||||||||   |||||| ||| |||||||||||| ||| ||||||| |||||||||||    
51666312 attccgaaacataaattcgacgtcgctatcgtctttaataagccaaggcatatagcttgtcgtgttccatgtgtattcatctc 51666230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 38690236 - 38690417
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||| |||    
38690236 taaacaacacattacacatcattatattaaatcc-tacttacattcatcacaattgcatatggaacaaacatacatatataatatattattttccaccat 38690334  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||  ||||||||||||||||||| ||||||||   |||||| ||| ||||||||||||||||||||||||||||||||||||    
38690335 attttgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 38690417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 46978977 - 46978798
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||| |||||||||||||||| |||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||| ||||| ||||||    
46978977 acaattcattacacatcattatattaaatccctacttacattcatcacaattgcattaggaacgaacatacatatataatatattattttccaccatatt 46978878  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
     |||||||||||||||||||| ||||||||   |||||| ||| |||||||||||| ||||||||||| |||||||||||    
46978877 tcgaaacataaatccgacgtcgctatcgtctttaataagccaaggcatatagcttgtcgttttccatgtgtattcatctc 46978798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 4518135 - 4517959
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||| ||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || || ||||||    
4518135 acaactcattacacatcattatat--aatccctacttacattcatcacaattgcatatggaacgaacatacatatataatatattatttttcaccatatt 4518038  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    ||||||||||||||||||||  |||| |||   |||||| ||| |||||||||||||| ||||||||||||||||||||    
4518037 ccgaaacataaatccgacgttgctatagtctttaataagccaaggcatatagcttgccattttccatgcgtattcatct 4517959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 15051094 - 15051053
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttac 52  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
15051094 taaactactcattacacatcattaaattaaatccctacttac 15051053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 37394949 - 37394768
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
37394949 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 37394850  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatct 192  Q
    ||||||||||||||||| |||||| |||||||| |||||||| ||| ||||| | |||||||||||||||||||||||||||    
37394849 attccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaggcatacaacttgccgttttccatgcgtattcatct 37394768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 10374366 - 10374548
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
10374366 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 10374465  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||| ||||||||||||| || ||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
10374466 atttcgaaacataaatctgatgtcgctatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 10374548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 6e-76
Query Start/End: Original strand, 14 - 193
Target Start/End: Complemental strand, 4774347 - 4774168
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
4774347 acaactcattacacatcattaaattaaatccctacttacatgcaacgcaattgcatatggaacgaacatacatatataacatattatcttccaccatatt 4774248  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||| |||||||| | |||||| |||  |||||||||||||||||||||||||||||||||||    
4774247 ccgaaacataaatccgacgtcgctatcgtcgcaaataagccaagccatatagcttgccgttttccatgcgtattcatctc 4774168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 3407985 - 3407803
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
3407985 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 3407886  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || |||||||||||||||||||||||| |||||||||||    
3407885 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgtgtattcatctc 3407803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 44050825 - 44050650
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
44050825 taaacaactcattacacatcattaaattaaatccctacttgcattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 44050726  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtatt 187  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||  |||||||||||  ||||||||||||||||    
44050725 attccgaaacataaatccgacgtcgctatcgtcgcgaataagccaa-acatatagcttgttgttttccatgcgtatt 44050650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 19069527 - 19069709
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
19069527 taaactactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatgtataatatattatcttccaccat 19069626  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||| |||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
19069627 attccgaaacataaacccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 19069709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 49564169 - 49564351
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
49564169 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 49564268  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
49564269 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 49564351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 10423154 - 10422972
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
10423154 taaacaactcattacatatcattagattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 10423055  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| | |||| | |||||||| |||  ||||||||||| ||||||||||| |||||| ||||    
10423054 attccgaaacataaatccgacgtcgcaatcgccgcgaataagccaagacatatagcttgtcgttttccatgtgtattcgtctc 10422972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 18578962 - 18579141
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||    
18578962 acaactcattacacatcattaaattaaatcacttcttacattcaacgcaattgcatatagaactaacatacatatataatatattatcttctaccatatt 18579061  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||| ||||||| ||||||||   ||| || ||| ||||||||||||||||||||||||||||||||||||    
18579062 ccgaaacataaattcgacgtcgctatcgtcttcaattagccaaggcatatagcttgccgttttccatgcgtattcatctc 18579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 24415498 - 24415679
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
24415498 acaactcattacatatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccatcatatt 24415597  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgc--atatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||| | ||||| ||||||||   |||||||||| ||  |||||||||| ||||||||||| |||||||||||    
24415598 ccgaaacataaatgcaacgtcgctatcgtcttcaataagtcaaggcatatatagcttgtcgttttccatgtgtattcatctc 24415679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 11506831 - 11506658
Alignment:
20 cattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaa 119  Q
    ||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||    
11506831 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 11506732  T
120 cataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||| |||| |||   |||||||||| ||||||||||||||||||||||||||||||||||||    
11506731 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 11506658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 38460752 - 38460934
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||||| ||||| |||    
38460752 taaacaactcattacacatgattatattaaatccctacttacattcatcacaattgcatatgcaacaaacatacatatataatatattattttccaccat 38460851  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||| ||||| ||||||||   |||||| ||| |||||||||||||||||||||||||| |||||||||    
38460852 attctgaaacataaatccaacgtcgctatcgtctttaataagccaaggcatatagcttgccgttttccatgcgcattcatctc 38460934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 6186995 - 6187126
Alignment:
21 attacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaac 120  Q
    |||||| |||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||    
6186995 attacatatcattaaattaaatctctactgacattctacgcatttgcatatggaacgaacatacatatataatatattatcttccaccatattgctaaac 6187094  T
121 ataaatccgacgtcactatcgtcacgaataag 152  Q
    |||||||| | ||| ||||||||  |||||||    
6187095 ataaatccaatgtcgctatcgtcgtgaataag 6187126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 50904909 - 50904819
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatc 101  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||    
50904909 taaacaattcatttcacatcattaaattaaatccctacttacattcaacacaattgcatatggaacaaacatacaaatataatatattatc 50904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 141
Target Start/End: Complemental strand, 30043166 - 30043039
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||| ||||||| ||| |||||| ||||| ||  | |||||| | | | ||||| |||||||||| ||||| |||||||||||||||||||| ||||||    
30043166 acaacacattacatatcgttaaatgaaatctctggtgacattctatgaagttgcaaatggaacgaaaatacaaatataatatattatcttccaccatatt 30043067  T
114 ccgaaacataaatccgacgtcactatcg 141  Q
    | |||||||||||||||||||| |||||    
30043066 ctgaaacataaatccgacgtcattatcg 30043039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 51642346 - 51642423
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatata 91  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| | ||||| ||||| |||||||||||||||||||    
51642346 acaactcattacatatcattaagttaaatcccaacttacattcatcacaattacatatagaacgaacatacatatata 51642423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 31598821 - 31598954
Alignment:
15 caactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattc 114  Q
    |||||||||||| | ||||| || ||||| ||||| |||||| |||||  ||||  | |||||| || | |||||||||||||||| ||| | |||||      
31598821 caactcattacataacattatatgaaatctctactgacattctacgcacatgcagttagaacgaccacaaatatataatatattattttcaaccatatgt 31598920  T
115 cgaaacataaatccgacgtcactatcgtcacgaa 148  Q
    | |||||||||||  | ||| || ||||||||||    
31598921 ctaaacataaatcttatgtcgctgtcgtcacgaa 31598954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 5072 - 4890
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
5072 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 4973  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
4972 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 4890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 6489670 - 6489852
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
6489670 taaacaactcattacacatcattaaattaaattcctacttacattcaacacaattgcatatggaacgaacatacatatataatatattatcttccaccat 6489769  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||| |||||||||||| | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
6489770 attccgaaatataaatccgacgacgctatcgtcacgaataagccaaggcatatagcttgccgttttccatgcgtattcgtctc 6489852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 2743782 - 2743964
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
2743782 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacgtatataatatattatcttccaccat 2743881  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
2743882 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 2743964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 46989853 - 46990035
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||    
46989853 taaacaactcattacacatcattaaattaaatccctacttacattcaacacaattgcatgtggaacgaacatacatatataatatattatcttccaccat 46989952  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||| ||||||||||||||||||   |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||    
46989953 attccaaaacataaatccgacgtcgtcatcgtcgcgaataagccaaggcatatagcttgccgttttccatgcgtattcatctc 46990035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 9426932 - 9427114
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
9426932 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaacgaacatacatatataatatattatcttccaccat 9427031  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || |||||||| |||||||||||||||||||||||||||    
9427032 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagtttgccgttttccatgcgtattcatctc 9427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 14402751 - 14402569
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||    
14402751 taaacaactcattacacgtcattaaattaaatccctacttacattcaacgcaattgcatatagaacgaacatacatatataatatattattttccaccat 14402652  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
14402651 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 14402569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 48246738 - 48246920
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||    
48246738 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcagttgcatatggaacaaacatacatatataatatattatcttccaccat 48246837  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| |  ||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||    
48246838 attccgaaacataaatctgacgtcgccgtcgtcgcgaataagccaaagcatatagcttgtcgttttccatgcgtattcatctc 48246920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 50957425 - 50957243
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
50957425 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccaccat 50957326  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||| |||||||||||| |  ||||| ||||||||  ||  |||||||||||||||||||||||||||||||||||    
50957325 attccgaaacaaaaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 50957243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 8156836 - 8157018
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
8156836 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 8156935  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
8156936 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 8157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 13743593 - 13743775
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
13743593 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 13743692  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
13743693 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 13743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 30943518 - 30943700
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
30943518 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 30943617  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
30943618 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 30943700  T

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Target: chr3; HSP #11
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 2857728 - 2857546
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||    
2857728 taaactactcattacacatcattaaattaaatccctacttacattcaacgcaattacatatggaatgaacatacatatataatatattattttccaccat 2857629  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
     ||||||||||||||||||||||| |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
2857628 tttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 2857546  T

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Target: chr3; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 3952960 - 3952778
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
3952960 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 3952861  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||  |  ||||| ||||||||  || ||||||||||||||||||||||||||||||||||||    
3952860 attccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 3952778  T

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Target: chr3; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 4002237 - 4002055
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||    
4002237 taaataactcattacacatcattaaattaaatccctacttacattcaacacaattgcatatggaacgaacatacatatataatatattattttccaccat 4002138  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
     ||||||||||||||||||||||| |  ||||| ||||||||  || |||||||||||| |||||||||||||||||||||||    
4002137 tttccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaaggcatatagcttgtcgttttccatgcgtattcatctc 4002055  T

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Target: chr3; HSP #14
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 36813178 - 36813360
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
36813178 taaacaactcattacacatcattaaattatatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatattccaccat 36813277  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||| |  ||||| ||||||||  ||  |||||||||||||||||||||  ||||||||||||    
36813278 attccgaaacataaatccgacgtcgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccacacgtattcatctc 36813360  T

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Target: chr3; HSP #15
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 11 - 190
Target Start/End: Original strand, 21952126 - 21952305
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| |||    
21952126 taaacaactcattacacgtcattaaattaaatccctagttacattcaatgcaattgcatatggaacgaacatacaaatataatatatcatcttccaccat 21952225  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcat 190  Q
    |||||||||| ||||||||||||| ||||| || |||||||| ||| ||| |||||||||||||||||||||||||||||    
21952226 attccgaaacctaaatccgacgtcgctatcatcgcgaataagccaaggcacatagcttgccgttttccatgcgtattcat 21952305  T

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Target: chr3; HSP #16
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 6745072 - 6744890
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||    
6745072 taaactactcattacacatcattaaattaaatccctacttacattcaatgcaattacatatggaacgaacatacatatataatatattgtcttccaccat 6744973  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||||||||||||||||  |  ||||| ||||||||  ||  |||||||||||||||||||||||||||||||||||    
6744972 attccgaaacataaatccgacgttgccgtcgtcgcgaataagcaaagacatatagcttgccgttttccatgcgtattcatctc 6744890  T

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Target: chr3; HSP #17
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 14 - 193
Target Start/End: Original strand, 67213 - 67392
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| ||||| ||||||    
67213 acaactcattacacatcattaaatgaaatccctacttacattcaacgcaatcacatatggaacgaacatacatatataatgtattattttccaccatatt 67312  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||||| |||| |||   |||||| |||  |||||||||||||||||| ||||||||||||||||    
67313 ccgaaacataaatccgacgtcgctattgtctttaataagccaagacatatagcttgccgtttttcatgcgtattcatctc 67392  T

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Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 7841422 - 7841474
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaa 63  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
7841422 taaacaactcattgcacatcattaaattaaatccctacttacattcaacgcaa 7841474  T

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Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 14013716 - 14013652
Alignment:
87 atataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgtcacgaataa 151  Q
    |||||||||||||||||| | ||  |||| |||||||||| | ||||||||||| ||||||||||    
14013716 atataatatattatcttcaaccacgttcctaaacataaattctacgtcactatcatcacgaataa 14013652  T

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Target: scaffold0116 (Bit Score: 139; Significance: 6e-73; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 11 - 193
Target Start/End: Complemental strand, 15701 - 15519
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
15701 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattattttccaccat 15602  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||| |||||| |  ||||| ||||||||  || ||||||||||||||||||||||| ||||||||||||    
15601 attccgaaacataaatctgacgtccccgtcgtcgcgaataagcaaaggcatatagcttgccgttttccatacgtattcatctc 15519  T

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Target: scaffold0201 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 22741 - 22923
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||    
22741 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcaaatggaacgaacatacatatataatataatattttccaccat 22840  T
111 attccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||| ||||||||||||||||||| |  ||||| | ||||||  || ||||||||||||||||||||||||||||||||||||    
22841 attctgaaacataaatccgacgtcgccgtcgtcgcaaataagcaaaggcatatagcttgccgttttccatgcgtattcatctc 22923  T

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Target: scaffold0169 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 43 - 193
Target Start/End: Complemental strand, 10978 - 10828
Alignment:
43 ccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaacataaatccgacgtcactatcgt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||| |||||| |||||||    
10978 ccctacttacattcaacgcaattgcatatggaacgaacatacaaatataatatattatcttccaccatattctgaaacataaatctgacgtcgctatcgt 10879  T
143 cacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
10878 cacgaataagccaaggcatatagcttgctgttttccatgcgtattcatctc 10828  T

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Target: scaffold0794 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 20 - 193
Target Start/End: Complemental strand, 1488 - 1315
Alignment:
20 cattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatattccgaaa 119  Q
    ||||||||||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||    
1488 cattacacatcattatattaaatccatacttacattcatcacaattgcatatggaacgaacatacatatataatatattattttccaccatatttcaaaa 1389  T
120 cataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||| |||| |||   |||||||||| ||||||||||||||||||||||||||||||||||||    
1388 cataaatccgacgtcgctattgtctttaataagtcaaggcatatagcttgccgttttccatgcgtattcatctc 1315  T

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Target: scaffold0219 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 19843 - 19743
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcat 110  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
19843 taaacaactcattgcacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgagcatacatatataatatattatcttccaccat 19744  T
111 a 111  Q
    |    
19743 a 19743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 109 - 193
Target Start/End: Complemental strand, 19582 - 19498
Alignment:
109 atattccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcatctc 193  Q
    ||||||||||||||||||| |||||| |||||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
19582 atattccgaaacataaatctgacgtcgctatcgtcgcgaataagccaaagcatatagcttgccgttttccatgcgtattcgtctc 19498  T

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Target: scaffold0513 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 8526 - 8602
Alignment:
11 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacata 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
8526 taaacaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacata 8602  T

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Target: scaffold0057 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 21977 - 22144
Alignment:
14 acaactcattacacatcattaaattaaatccctacttacattcaacgcaattgcatatggaacgaacatacatatataatatattatcttccatcatatt 113  Q
    ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||         | ||||| ||||||    
21977 acaactcattacacatcattatattaaatccctacttacattcatcacaattgcatatggaacgaacatacatatat---------ttttccaccatatt 22067  T
114 ccgaaacataaatccgacgtcactatcgtcacgaataagtcaatgcatatagcttgccgttttccatgcgtattcat 190  Q
    || |||||||||| ||||||| |||| |||   |||||| |||  |||||| |||| | ||||||||||||||||||    
22068 ccaaaacataaattcgacgtcgctattgtctttaataagccaagacatataacttgtcattttccatgcgtattcat 22144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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