View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14107_high_12 (Length: 440)
Name: NF14107_high_12
Description: NF14107
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14107_high_12 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 383; Significance: 0; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 5 - 427
Target Start/End: Complemental strand, 225212 - 224790
Alignment:
| Q |
5 |
taatagtataactgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactc |
104 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
225212 |
taatagtataactgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactc |
225113 |
T |
 |
| Q |
105 |
aagaatgttgctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagt |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
225112 |
aagaatgttgctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacaat |
225013 |
T |
 |
| Q |
205 |
ttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttaatgttattatatttgatgtaacttctgttga |
304 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
225012 |
ttgcagaatactattctttaagatatggttgcttcatgtctttcaaatatgaagggaattcaaagtttagtgttattatatttgatgtaacttctgttga |
224913 |
T |
 |
| Q |
305 |
gatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaagtgtcctaggcctatgaaaaggtccagggttgaaatcaattatgctgat |
404 |
Q |
| |
|
||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
224912 |
gatttgctatccactcaaaactccaagtactaatggagaaacaaacacagagtgtcctagacctacgaaaaggtccagggttgaaatcaattatgctgat |
224813 |
T |
 |
| Q |
405 |
gattcaccaagtgaggatgaagg |
427 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
224812 |
gattcaccaagtgaggatgaagg |
224790 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 5 - 390
Target Start/End: Complemental strand, 210733 - 210345
Alignment:
| Q |
5 |
taatagtataactgatgagttgttttataatcaattaaacaagtgataataactgcagagaattcctgaagtctttataacaatatatgggagcgaactc |
104 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| | ||||| |||||| |
|
|
| T |
210733 |
taatagtataactgatgagttattttataatcaattaaacaagtgatgataactgcagagaattccagaaaactttataacaatgtttgggaatgaactc |
210634 |
T |
 |
| Q |
105 |
aagaatgttgctacaattactgtaccggatggtcttacttggaaattggaattgaagaaacgtggggaggatgtttacttttgcaacaa---atggaaac |
201 |
Q |
| |
|
|||||||||||||| ||||||| || |||||| | |||| || |||| ||||||||| |||| ||||||||||||||||||||||| |||| ||| |
|
|
| T |
210633 |
gagaatgttgctacagttactgttcccgatggttgtgattgggaaatggacttgaagaaatgtggcgaggatgtttacttttgcaacaaggaatggcaac |
210534 |
T |
 |
| Q |
202 |
agtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttaatgttattatatttgatgtaacttctgt |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| |||| |||||||||||||||| ||||||||| |
|
|
| T |
210533 |
agtttgcagaatactattctttaagatacggttgcttcctgtctttcagatacgaagggaattcaaattttagcgttattatatttgatgcaacttctgt |
210434 |
T |
 |
| Q |
302 |
tgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaagtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
210433 |
tgaaatttgctatccattaaaaactccaagtactagtggagaaacaaacaccgagtgtcctaggcctatgaaaaggtccaaggttgaaa |
210345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 56 - 390
Target Start/End: Complemental strand, 222227 - 221893
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
||||||||||||||| || | ||||||| || || ||||| ||||||||||||||||||||||||||||| || ||||| | |||| || ||||| |
|
|
| T |
222227 |
actgcagagaattccagatggatttataaaaagatttgggaatgaactcaagaatgttgctacaattactgttcccgatggctgtgattgggaaatggaa |
222128 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
|||||||| | || | || ||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| |||| || ||||||||||| |
|
|
| T |
222127 |
ctgaagaaatgcggcaacgacgtttacttttgcaacaaatggcaacagtttgcagaatactattctatagggtatggttccttcttgcgtttcaaatatg |
222028 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaa |
355 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| || ||||||||||||||| || |
|
|
| T |
222027 |
aaggggattcaaagtttaatgttgttatatttgatgtaacttctgttgagatttgctatccattcaaaactcaaagtattaatggagaaacaaacacaaa |
221928 |
T |
 |
| Q |
356 |
gtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
||||| ||| |||| ||||||||||| |||||||| |
|
|
| T |
221927 |
gtgtcatagtcctaggaaaaggtccaaggttgaaa |
221893 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 56 - 390
Target Start/End: Complemental strand, 217282 - 216948
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
|||| |||||||||| || | ||||||| || || ||||| ||||||||||||||||||||||||||||| || |||||| | |||| || || || |
|
|
| T |
217282 |
actgtagagaattccagatgaatttataaaaagatttgggaatgaactcaagaatgttgctacaattactgttcccgatggttgtgattgggaaatgaaa |
217183 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
|||||||| | || | || ||||||||||||||||||||| ||||||||||||||||||||||| || | || |||| |||| ||| ||||||||||| |
|
|
| T |
217182 |
ctgaagaaatgcggcaatgacgtttacttttgcaacaaatggcaacagtttgcagaatactattctatagggtatggttccttcctgtgtttcaaatatg |
217083 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaa |
355 |
Q |
| |
|
||||| |||||||||||| ||| |||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||| | |||||||||||| || || |
|
|
| T |
217082 |
aaggggattcaaagtttagtgtctttatatttgatgcaacttctattgagatttgctatccattcaaaactcaaagtacaaatggagaaacaaaaacaaa |
216983 |
T |
 |
| Q |
356 |
gtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
|| || ||| |||| ||||||||||| |||||||| |
|
|
| T |
216982 |
gtttcatagtcctaggaaaaggtccaaggttgaaa |
216948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 56 - 390
Target Start/End: Complemental strand, 197404 - 197070
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| | ||||| |||||| |||| ||||||||| |||| || || ||||||| | ||||||| || | |
|
|
| T |
197404 |
actgcagagaattcctgaagactttataacaatgtttgggaatgaactcgagaaagttgctacagttacagttcccgatggtcgtgattggaaaatgaga |
197305 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
||||||||||| || | || ||| ||||| |||| ||||| || |||| ||| |||||||||| ||| | || ||||||| | | ||||||||||| | |
|
|
| T |
197304 |
ttgaagaaacgcggcaatgacattttcttttccaacgaatgggaagagttcgcaaaatactattcattagggtatggttgctacctatctttcaaatacg |
197205 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaa |
355 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||| || ||||||| ||||||| || |
|
|
| T |
197204 |
aagggaattcaaagtttagtgttattatatttgacgtaacttatgttgagatttgttatccattaaaaactccaagtgttaatggagaaccaaacacaaa |
197105 |
T |
 |
| Q |
356 |
gtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
||| |||| |||| ||||||||||| |||||||| |
|
|
| T |
197104 |
atgtgctagtcctacgaaaaggtccaaggttgaaa |
197070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 56 - 390
Target Start/End: Original strand, 204789 - 205123
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
||||||||||||| | || | |||||||||| || ||||| ||||||||||||||||||||| |||||| | ||||||| | ||||| | || | |
|
|
| T |
204789 |
actgcagagaatttcagatgagtttataacaagatttgggatagaactcaagaatgttgctacagttactgctactgatggtcgtgattggagaatgaga |
204888 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
|||||||||| || | || ||| ||||| |||| ||||| || |||||||| |||||||||| ||| ||| ||||||| | | ||||||||||| | |
|
|
| T |
204889 |
ttgaagaaacacggcaatgacattttcttttacaacgaatggcaagagtttgcaaaatactattcgttaggatgtggttgctacctatctttcaaatacg |
204988 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaa |
355 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |||||||||||| || | |
|
|
| T |
204989 |
aaggaaattcaaagtttagtgttgttatatttgatgtaacttcggttgagatttgctatccactcaaaactccgagtactaatggagaaacaaatacaca |
205088 |
T |
 |
| Q |
356 |
gtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
||||||| |||| ||||| || |||||||||| |
|
|
| T |
205089 |
atgtcctactcctagaaaaagttcaagggttgaaa |
205123 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 351
Target Start/End: Complemental strand, 226403 - 226108
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
||||||||||||||| || | |||||||||| || ||||| |||||| | ||||||||||| |||||||| || ||||||| | ||||| ||||| |
|
|
| T |
226403 |
actgcagagaattccagatgagtttataacaagatttgggaatgaactcgacaatgttgctaccattactgttcccgatggtcgtgagtggaatatggaa |
226304 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
| |||||| |||| | | ||| |||||||||||| ||| ||||||||||||||||||||| | | || ||||| | | ||||||||||| |
|
|
| T |
226303 |
ctaaagaaatgtggcggccaaattttcttttgcaacaattggcaacagtttgcagaatactattgtatttattatggttgttatttagatttcaaatatg |
226204 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaaca |
351 |
Q |
| |
|
|||||||||||||||| |||||| |||||| ||| ||||||||||||||||| |||||||| |||||| || |||| ||||||| |||||| |
|
|
| T |
226203 |
aagggaattcaaagttcaatgttgttatatacgatagaacttctgttgagatttcttatccattccaaactcggaggactaatggagaaccaaaca |
226108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 198372 - 198274
Alignment:
| Q |
245 |
tttcaaatatgaagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggaga |
343 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||| |||| |||||||||||||||| |||||| |
|
|
| T |
198372 |
tttcaactatcaagggaattcaaagtttaatgttgttatatatgatacaacttctgttgagatttcttattcattcaaaactccaagtactaatggaga |
198274 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 245 - 351
Target Start/End: Complemental strand, 211771 - 211665
Alignment:
| Q |
245 |
tttcaaatatgaagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaa |
344 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||| |||||| ||| ||||||||||||||||| |||||||| |||||| || |||| ||||||| |
|
|
| T |
211771 |
tttcaaatacgaagggaattcaaagttcaatgttgttatatacgatacaacttctgttgagatttcttatccattccaaactcggaggactaatggagaa |
211672 |
T |
 |
| Q |
345 |
acaaaca |
351 |
Q |
| |
|
|||||| |
|
|
| T |
211671 |
gcaaaca |
211665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 343
Target Start/End: Original strand, 203516 - 203682
Alignment:
| Q |
177 |
gtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttaatg |
276 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||||||||||||||| | || |||||||| | | |||||| |||||||| |||||||| || | |
|
|
| T |
203516 |
gttttcttttgcaacaattggcaacactttgcagaatactattccatcagttacggttgttatttagatttcaagtatgaaggaaattcaaatttcgtag |
203615 |
T |
 |
| Q |
277 |
ttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggaga |
343 |
Q |
| |
|
|| |||||| |||| ||||| ||||||||||| |||||||| |||||| ||||||||| |||||| |
|
|
| T |
203616 |
ttgttatatatgatccaacttttgttgagatttcttatccattcaaaacttcaagtactaatggaga |
203682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 58 - 390
Target Start/End: Complemental strand, 29838555 - 29838223
Alignment:
| Q |
58 |
tgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaatt |
157 |
Q |
| |
|
||||||||||||| || | |||||||||| || ||| | |||||||| |||||||||||||||||||| || ||||||| | |||||| ||||| | |
|
|
| T |
29838555 |
tgcagagaattccagatgaatttataacaagatttggaaatgaactcaataatgttgctacaattactgttccagatggtcgtgtatggaaaatggaact |
29838456 |
T |
 |
| Q |
158 |
gaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaa |
257 |
Q |
| |
|
|||||||||||| ||| |||||| |||||||||||||||| || |||||| |||||| |||||| || |||| ||||||||||| ||||||||||||||| |
|
|
| T |
29838455 |
gaagaaacgtggcgagaatgttttcttttgcaacaaatggcaagagtttgtagaatattattctataggatatggttgcttcatttctttcaaatatgaa |
29838356 |
T |
 |
| Q |
258 |
gggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaagt |
357 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||| || ||||||||||||||| ||||||| |||| || || | |
|
|
| T |
29838355 |
gggaattcaaagtttagtgttattatatttgatgcaacttctgttgaaatttcctatcctttcgaaactccaagtactaatggagaaccaaaaacaaatt |
29838256 |
T |
 |
| Q |
358 |
gtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
|||||| ||| |||||||||| |||||||| |
|
|
| T |
29838255 |
atcctagttctagaaaaaggtccaaggttgaaa |
29838223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 56 - 390
Target Start/End: Complemental strand, 6903704 - 6903370
Alignment:
| Q |
56 |
actgcagagaattcctgaagtctttataacaatatatgggagcgaactcaagaatgttgctacaattactgtaccggatggtcttacttggaaattggaa |
155 |
Q |
| |
|
||||||||||||| | || | |||||||||| || ||||| ||||||||||||||||||||| |||||| || ||||||| | ||||| | || | |
|
|
| T |
6903704 |
actgcagagaatttcagatgagtttataacaagatttgggatagaactcaagaatgttgctacagttactgctcctgatggtcgtgattggagaatgaga |
6903605 |
T |
 |
| Q |
156 |
ttgaagaaacgtggggaggatgtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatg |
255 |
Q |
| |
|
|||||||||| || | | ||| ||||| |||| ||||| || |||||||| |||||||||| ||| |||| ||||||| | | ||||||||||| | |
|
|
| T |
6903604 |
ttgaagaaacacggcaattacattttcttttacaacgaatggcaagagtttgcaaaatactattcattaggatatggttgctacctatctttcaaatacg |
6903505 |
T |
 |
| Q |
256 |
aagggaattcaaagtttaatgttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaa |
355 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |||||||||||| || | |
|
|
| T |
6903504 |
aaggaaattcaaagtttagtgttattatatttgatgtaacttcggttgagatttgctatccactcaaaactccgagtactaatggagaaacaaatacaca |
6903405 |
T |
 |
| Q |
356 |
gtgtcctaggcctatgaaaaggtccagggttgaaa |
390 |
Q |
| |
|
||||||| |||| ||||| ||||||||||||| |
|
|
| T |
6903404 |
atgtcctactcctagaaaaagttccagggttgaaa |
6903370 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 343
Target Start/End: Complemental strand, 6904969 - 6904803
Alignment:
| Q |
177 |
gtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattcaaagtttaatg |
276 |
Q |
| |
|
|||| |||||||||||| ||| |||| ||||||||||||||||| | || ||| |||| | | |||||| ||||||| ||||||||| || | |
|
|
| T |
6904969 |
gttttcttttgcaacaattggcaacactttgcagaatactattccatcagttacagttgttatttagatttcaagtatgaagagaattcaaatttcgtag |
6904870 |
T |
 |
| Q |
277 |
ttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggaga |
343 |
Q |
| |
|
|| |||||| |||| ||||| ||||||||||| |||||||| |||||||||||||||| |||||| |
|
|
| T |
6904869 |
ttgttatatatgatccaacttttgttgagatttcttatccattcaaaactccaagtactaatggaga |
6904803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 177 - 364
Target Start/End: Complemental strand, 3808532 - 3808344
Alignment:
| Q |
177 |
gtttacttttgcaacaaatggaaacagtttgcagaatactattctttaagatacggttgcttcatgtctttcaaatatgaagggaattc-aaagtttaat |
275 |
Q |
| |
|
|||| |||||||||||||||| || |||| ||||||||| || || |||| ||||| | | | |||||||| |||||||| ||||| |||||||| | |
|
|
| T |
3808532 |
gttttcttttgcaacaaatggcaagagttcatagaatactactcaataggatatggttggtacctttctttcaattatgaaggaaattccaaagtttagt |
3808433 |
T |
 |
| Q |
276 |
gttattatatttgatgtaacttctgttgagatttgctatccattaaaaactccaagtactagtggagaaacaaacaccaagtgtcctag |
364 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||| | ||||| ||||||| |||| |||||| |
|
|
| T |
3808432 |
gttattatatttgacgtaacttctgttgggatttgctatccgttcaaaactccaagtactaatagagaaccaaacacaaagtatcctag |
3808344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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