View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14109_high_15 (Length: 292)
Name: NF14109_high_15
Description: NF14109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14109_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 11 - 275
Target Start/End: Complemental strand, 43532977 - 43532713
Alignment:
| Q |
11 |
attctgcctaaagatccaagtattaaatttatgtacagctatctcaaattgaattatatttggaacaaaattaatattccattcaaacggtgtattttcg |
110 |
Q |
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| T |
43532977 |
attctgcctaaagatccaagtattaaatttatgtacagctatctcaaattgaattatatttggaacaaaattaatattccattcaaacggtgtattttcg |
43532878 |
T |
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| Q |
111 |
accatttgcagggctaaagtataaccctacaagtgttatatatttgaagataccaactatatctcatcttcaatggcattcattcagtataatatcaagt |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43532877 |
accatttgcagggctaaagtataaccctacaagtgttatatatttgaagataccaactatatctcatcttcaatggcattcattcagtataatatcaagt |
43532778 |
T |
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| Q |
211 |
tccaaagctgatgacaacaacatgtctgtgatgattaaatgtcaagggtggtggaccactactct |
275 |
Q |
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| T |
43532777 |
tccaaagctgatgacaacaacatgtctgtgatgattaaatgtcaagggtggtggaccactactct |
43532713 |
T |
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