View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14109_high_19 (Length: 260)
Name: NF14109_high_19
Description: NF14109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14109_high_19 |
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Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 4387293 - 4387537
Alignment:
| Q |
1 |
tgatgatatgtgctgtgatggcaaaatttgattttgattaaattgaattcaaagtgaaatgagttgtgtttgaatatattcacttaaaagtgaattaaag |
100 |
Q |
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| T |
4387293 |
tgatgatatgtgctgtggtggcaaaatttgattttgattaaattgaattcaaagtgaaatgagttgtgtttgaatatattcacttaaaag-gaattaaag |
4387391 |
T |
|
| Q |
101 |
gtatatttgagtataaagataacatttgataataaaatttaattgtagttttaaattaaaatcatttctaaagacaaagtcacttactaaagatattcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
4387392 |
gtatatttgagtataaagataacatttgataataaaatttaactgtagttttaaattaaaatcatttataaagacaaagtcacttactaaagatattcaa |
4387491 |
T |
|
| Q |
201 |
ttttaagtgttcagaatcactttgactcttttaaaagtgaaaatat |
246 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
4387492 |
ttttaagtgttcagaattactttgactcttttaaaagtgaaaatat |
4387537 |
T |
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