View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14109_low_24 (Length: 238)

Name: NF14109_low_24
Description: NF14109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14109_low_24
NF14109_low_24
[»] chr1 (129 HSPs)
chr1 (5-225)||(46738888-46739117)
chr1 (1-223)||(32563953-32564176)
chr1 (1-218)||(29256831-29257049)
chr1 (1-211)||(22584357-22584577)
chr1 (1-214)||(25088019-25088242)
chr1 (5-214)||(34028885-34029104)
chr1 (1-214)||(51691877-51692100)
chr1 (1-213)||(51810141-51810364)
chr1 (1-221)||(37198928-37199147)
chr1 (2-214)||(10654033-10654254)
chr1 (68-218)||(37199157-37199308)
chr1 (68-216)||(10654265-10654414)
chr1 (71-214)||(23281249-23281393)
chr1 (11-221)||(33753386-33753605)
chr1 (68-219)||(52412834-52412986)
chr1 (1-218)||(4045098-4045325)
chr1 (4-217)||(30293176-30293398)
chr1 (1-217)||(6181616-6181842)
chr1 (5-214)||(13944675-13944894)
chr1 (68-206)||(24590461-24590600)
chr1 (68-214)||(50921063-50921210)
chr1 (68-217)||(42607522-42607672)
chr1 (5-213)||(36657665-36657883)
chr1 (71-214)||(18793694-18793838)
chr1 (75-214)||(45305653-45305792)
chr1 (4-207)||(50574525-50574737)
chr1 (68-214)||(14118533-14118680)
chr1 (68-218)||(30293012-30293163)
chr1 (68-214)||(33753228-33753375)
chr1 (68-214)||(34028724-34028871)
chr1 (1-214)||(34279243-34279466)
chr1 (1-214)||(18793852-18794076)
chr1 (1-194)||(24590250-24590451)
chr1 (68-220)||(50574753-50574906)
chr1 (1-214)||(30611380-30611604)
chr1 (71-221)||(34279479-34279631)
chr1 (5-207)||(52412608-52412820)
chr1 (68-226)||(4045335-4045494)
chr1 (1-214)||(11394820-11395043)
chr1 (68-214)||(16267718-16267865)
chr1 (68-214)||(19986358-19986505)
chr1 (1-214)||(30792443-30792666)
chr1 (5-205)||(27209181-27209391)
chr1 (68-225)||(49291219-49291377)
chr1 (1-206)||(10923373-10923589)
chr1 (68-219)||(10923599-10923751)
chr1 (68-214)||(9881555-9881701)
chr1 (68-214)||(11787743-11787890)
chr1 (1-214)||(24655746-24655969)
chr1 (68-217)||(50118347-50118497)
chr1 (1-165)||(36884875-36885037)
chr1 (4-173)||(11797220-11797397)
chr1 (68-219)||(28970417-28970569)
chr1 (5-144)||(50921224-50921372)
chr1 (8-217)||(1831831-1832050)
chr1 (68-214)||(14775971-14776118)
chr1 (68-214)||(16267926-16268072)
chr1 (68-218)||(30611219-30611370)
chr1 (70-219)||(32517751-32517899)
chr1 (68-214)||(32564186-32564332)
chr1 (68-214)||(35986235-35986382)
chr1 (68-214)||(51692107-51692253)
chr1 (68-217)||(24655586-24655736)
chr1 (82-206)||(22584602-22584727)
chr1 (1-226)||(11787900-11788135)
chr1 (10-181)||(46949905-46950085)
chr1 (1-190)||(5463145-5463344)
chr1 (68-214)||(21035988-21036135)
chr1 (1-214)||(21385096-21385319)
chr1 (68-218)||(29257059-29257210)
chr1 (1-158)||(9119452-9119618)
chr1 (68-220)||(5463354-5463507)
chr1 (1-214)||(45305412-45305636)
chr1 (68-214)||(6181852-6181999)
chr1 (68-218)||(13944510-13944661)
chr1 (68-218)||(25088252-25088402)
chr1 (68-194)||(49291017-49291143)
chr1 (71-218)||(44222191-44222339)
chr1 (111-226)||(50921370-50921486)
chr1 (112-222)||(19885977-19886088)
chr1 (10-214)||(42607671-42607885)
chr1 (68-173)||(5118096-5118201)
chr1 (68-165)||(28112803-28112900)
chr1 (39-221)||(14775741-14775933)
chr1 (2-219)||(21036146-21036369)
chr1 (5-144)||(2125293-2125431)
chr1 (7-214)||(31125939-31126149)
chr1 (79-194)||(46949780-46949895)
chr1 (68-214)||(1831667-1831810)
chr1 (68-170)||(13831258-13831360)
chr1 (68-221)||(34621871-34622025)
chr1 (88-195)||(32517628-32517735)
chr1 (68-206)||(51810374-51810513)
chr1 (68-194)||(21384961-21385086)
chr1 (111-214)||(36077274-36077378)
chr1 (1-205)||(40702880-40703091)
chr1 (68-218)||(9119291-9119442)
chr1 (99-221)||(36884718-36884841)
chr1 (1-214)||(48702051-48702263)
chr1 (68-214)||(36657503-36657651)
chr1 (68-214)||(4550836-4550983)
chr1 (68-215)||(40533927-40534075)
chr1 (68-213)||(40703101-40703247)
chr1 (1-75)||(19986274-19986348)
chr1 (76-151)||(30792684-30792759)
chr1 (68-173)||(19886123-19886226)
chr1 (1-194)||(40534085-40534287)
chr1 (68-164)||(31126165-31126261)
chr1 (76-205)||(3569388-3569519)
chr1 (132-214)||(5117996-5118079)
chr1 (71-219)||(2125448-2125590)
chr1 (79-164)||(4054602-4054688)
chr1 (132-217)||(19886214-19886300)
chr1 (10-75)||(28112899-28112964)
chr1 (132-214)||(11797149-11797232)
chr1 (132-214)||(28112724-28112807)
chr1 (123-220)||(19269357-19269455)
chr1 (1-56)||(13831193-13831248)
chr1 (111-194)||(20260452-20260535)
chr1 (76-220)||(27209393-27209538)
chr1 (2-63)||(12987718-12987779)
chr1 (1-96)||(4550722-4550826)
chr1 (68-214)||(20260615-20260762)
chr1 (68-222)||(34621616-34621771)
chr1 (147-213)||(11394697-11394763)
chr1 (1-63)||(20260543-20260605)
chr1 (1-75)||(35986392-35986466)
chr1 (75-144)||(38961149-38961219)
chr1 (132-173)||(5118067-5118108)
[»] chr2 (109 HSPs)
chr2 (1-214)||(39454454-39454668)
chr2 (2-214)||(18565069-18565279)
chr2 (1-226)||(31450657-31450892)
chr2 (1-219)||(32503706-32503925)
chr2 (1-219)||(44612643-44612872)
chr2 (8-219)||(41377353-41377573)
chr2 (1-214)||(32933751-32933974)
chr2 (1-214)||(4104319-4104542)
chr2 (1-214)||(12303788-12304011)
chr2 (1-214)||(21470298-21470521)
chr2 (1-214)||(25642428-25642651)
chr2 (1-226)||(34820270-34820505)
chr2 (15-194)||(35408704-35408883)
chr2 (1-217)||(4120923-4121149)
chr2 (1-190)||(27883628-27883815)
chr2 (1-213)||(28631278-28631500)
chr2 (7-214)||(17856202-17856408)
chr2 (1-214)||(13354337-13354560)
chr2 (1-214)||(43183586-43183809)
chr2 (1-218)||(27132510-27132736)
chr2 (1-213)||(34127570-34127791)
chr2 (2-226)||(20908502-20908736)
chr2 (1-214)||(28202863-28203086)
chr2 (1-213)||(16655610-16655832)
chr2 (10-219)||(40694344-40694558)
chr2 (68-219)||(28203096-28203248)
chr2 (1-173)||(36211510-36211682)
chr2 (1-214)||(27476527-27476750)
chr2 (70-220)||(28631512-28631663)
chr2 (68-214)||(41377590-41377737)
chr2 (68-218)||(43183819-43183970)
chr2 (1-214)||(39150004-39150208)
chr2 (1-214)||(14877486-14877703)
chr2 (68-214)||(38275691-38275840)
chr2 (1-214)||(16736261-16736481)
chr2 (36-219)||(37744583-37744776)
chr2 (1-173)||(16350240-16350412)
chr2 (24-214)||(37412596-37412796)
chr2 (71-214)||(37412817-37412961)
chr2 (22-216)||(38275478-38275671)
chr2 (68-214)||(27883471-27883618)
chr2 (68-218)||(32933590-32933741)
chr2 (1-219)||(33819556-33819782)
chr2 (68-218)||(34820515-34820666)
chr2 (1-206)||(41659756-41659971)
chr2 (76-214)||(39912870-39913011)
chr2 (76-219)||(13354175-13354319)
chr2 (68-219)||(16736099-16736251)
chr2 (1-226)||(16261030-16261265)
chr2 (82-214)||(4104162-4104295)
chr2 (68-214)||(12304390-12304537)
chr2 (68-214)||(20908747-20908894)
chr2 (68-214)||(27132746-27132893)
chr2 (2-214)||(36442136-36442359)
chr2 (68-219)||(5961667-5961819)
chr2 (68-214)||(17856424-17856572)
chr2 (68-210)||(12304021-12304164)
chr2 (68-191)||(15829747-15829870)
chr2 (69-212)||(21470532-21470675)
chr2 (68-226)||(41659972-41660131)
chr2 (68-214)||(5921622-5921769)
chr2 (68-226)||(15137040-15137199)
chr2 (68-218)||(16655842-16655993)
chr2 (68-214)||(31450902-31451049)
chr2 (68-218)||(44915739-44915889)
chr2 (82-214)||(39912630-39912764)
chr2 (76-215)||(27476368-27476509)
chr2 (68-214)||(16260874-16261020)
chr2 (68-214)||(34127801-34127947)
chr2 (68-212)||(10833270-10833416)
chr2 (68-194)||(39149868-39149994)
chr2 (34-214)||(45389134-45389313)
chr2 (82-214)||(4120767-4120900)
chr2 (1-173)||(44915899-44916080)
chr2 (99-214)||(37744452-37744568)
chr2 (68-219)||(40694193-40694345)
chr2 (68-218)||(33819396-33819546)
chr2 (89-203)||(34484303-34484418)
chr2 (68-212)||(25642273-25642418)
chr2 (1-136)||(27246065-27246209)
chr2 (68-214)||(36211353-36211500)
chr2 (68-206)||(36442370-36442509)
chr2 (68-190)||(32503574-32503696)
chr2 (111-214)||(18565282-18565386)
chr2 (1-66)||(5961829-5961894)
chr2 (68-193)||(11943728-11943849)
chr2 (5-194)||(27913918-27914115)
chr2 (111-214)||(39454712-39454816)
chr2 (68-219)||(27246219-27246371)
chr2 (130-214)||(20297413-20297498)
chr2 (130-214)||(36211697-36211782)
chr2 (148-219)||(34484233-34484305)
chr2 (68-215)||(16350079-16350227)
chr2 (76-218)||(5720141-5720284)
chr2 (1-61)||(10833200-10833260)
chr2 (71-220)||(27914132-27914282)
chr2 (1-55)||(5921558-5921612)
chr2 (1-52)||(11943667-11943718)
chr2 (1-51)||(12304330-12304380)
chr2 (153-218)||(44610861-44610926)
chr2 (99-214)||(23992172-23992289)
chr2 (68-161)||(44612548-44612633)
chr2 (139-220)||(1580148-1580230)
chr2 (111-194)||(1580030-1580113)
chr2 (76-127)||(3603596-3603647)
chr2 (90-165)||(15136275-15136350)
chr2 (76-127)||(29078011-29078062)
chr2 (1-63)||(39912788-39912843)
chr2 (155-218)||(40469092-40469156)
[»] chr8 (95 HSPs)
chr8 (1-214)||(37393637-37393860)
chr8 (1-214)||(18914420-18914634)
chr8 (1-217)||(23244515-23244741)
chr8 (2-214)||(24456813-24457035)
chr8 (1-214)||(40032429-40032644)
chr8 (1-214)||(40040165-40040388)
chr8 (1-217)||(26736125-26736351)
chr8 (1-224)||(39912077-39912312)
chr8 (3-214)||(44254868-44255089)
chr8 (1-214)||(30650193-30650416)
chr8 (1-214)||(1825969-1826174)
chr8 (1-214)||(1860414-1860619)
chr8 (1-222)||(8653931-8654162)
chr8 (1-214)||(31230773-31230996)
chr8 (1-218)||(6843494-6843712)
chr8 (4-212)||(14920574-14920792)
chr8 (1-220)||(40094471-40094701)
chr8 (1-220)||(29026965-29027198)
chr8 (1-217)||(39240190-39240405)
chr8 (16-219)||(758342-758555)
chr8 (9-214)||(18017793-18018008)
chr8 (68-214)||(119120-119266)
chr8 (1-195)||(7041652-7041855)
chr8 (68-220)||(31230610-31230763)
chr8 (4-214)||(11639055-11639274)
chr8 (1-214)||(30872947-30873161)
chr8 (68-214)||(35223777-35223924)
chr8 (68-214)||(35224003-35224150)
chr8 (1-214)||(119276-119499)
chr8 (8-145)||(9495105-9495242)
chr8 (1-194)||(12873081-12873274)
chr8 (68-214)||(39240033-39240180)
chr8 (68-219)||(3869185-3869337)
chr8 (68-214)||(758580-758727)
chr8 (68-218)||(23244751-23244902)
chr8 (68-218)||(37393476-37393627)
chr8 (68-212)||(14920416-14920561)
chr8 (2-214)||(5416973-5417196)
chr8 (1-214)||(28206769-28206984)
chr8 (68-214)||(9495259-9495406)
chr8 (68-214)||(18018022-18018169)
chr8 (82-214)||(30872786-30872919)
chr8 (1-214)||(3868947-3869175)
chr8 (68-214)||(11198441-11198588)
chr8 (68-214)||(18621983-18622130)
chr8 (5-163)||(30568331-30568498)
chr8 (68-214)||(36343965-36344111)
chr8 (77-194)||(21515445-21515562)
chr8 (2-205)||(26217082-26217294)
chr8 (68-219)||(8654172-8654324)
chr8 (68-214)||(5416815-5416962)
chr8 (68-210)||(39911924-39912067)
chr8 (70-206)||(29027210-29027343)
chr8 (68-214)||(30568512-30568659)
chr8 (2-189)||(32733740-32733936)
chr8 (70-213)||(40094713-40094857)
chr8 (68-214)||(7041865-7042007)
chr8 (1-179)||(35485910-35486088)
chr8 (72-220)||(1825807-1825955)
chr8 (72-220)||(1860252-1860400)
chr8 (68-214)||(16645781-16645931)
chr8 (3-165)||(19302347-19302510)
chr8 (68-194)||(44255098-44255224)
chr8 (1-105)||(21515324-21515426)
chr8 (68-214)||(26736361-26736508)
chr8 (87-214)||(6844695-6844823)
chr8 (1-108)||(16645655-16645771)
chr8 (137-220)||(24456731-24456815)
chr8 (99-191)||(40032695-40032787)
chr8 (71-158)||(18914320-18914407)
chr8 (5-75)||(18621899-18621969)
chr8 (68-207)||(5525881-5526019)
chr8 (68-173)||(26217305-26217410)
chr8 (68-219)||(33542382-33542534)
chr8 (1-179)||(33542544-33542731)
chr8 (76-163)||(44678428-44678515)
chr8 (127-214)||(44678320-44678408)
chr8 (68-214)||(12873284-12873429)
chr8 (7-220)||(36344127-36344350)
chr8 (68-182)||(410598-410712)
chr8 (76-214)||(28206997-28207136)
chr8 (71-217)||(35486102-35486249)
chr8 (76-144)||(40040406-40040474)
chr8 (68-182)||(410405-410519)
chr8 (68-135)||(11639286-11639353)
chr8 (137-214)||(44678518-44678595)
chr8 (111-214)||(21512416-21512519)
chr8 (99-221)||(45436426-45436552)
chr8 (110-162)||(18623667-18623719)
chr8 (78-129)||(19302274-19302325)
chr8 (75-165)||(29769416-29769506)
chr8 (76-212)||(15740618-15740755)
chr8 (132-214)||(26217398-26217484)
chr8 (176-220)||(11639379-11639424)
chr8 (1-63)||(35223938-35223993)
[»] chr6 (64 HSPs)
chr6 (1-220)||(24604872-24605100)
chr6 (1-219)||(31029522-31029750)
chr6 (1-223)||(33329200-33329432)
chr6 (1-223)||(29009948-29010180)
chr6 (1-214)||(6220216-6220439)
chr6 (1-194)||(33544982-33545184)
chr6 (10-214)||(3288933-3289147)
chr6 (2-226)||(14337063-14337296)
chr6 (1-214)||(3338480-3338703)
chr6 (68-226)||(33544813-33544972)
chr6 (1-212)||(1158593-1158817)
chr6 (1-173)||(33972366-33972547)
chr6 (1-219)||(11524926-11525153)
chr6 (22-219)||(25551345-25551552)
chr6 (1-220)||(13155836-13156065)
chr6 (1-220)||(13160692-13160921)
chr6 (68-221)||(25551572-25551726)
chr6 (68-212)||(24605110-24605254)
chr6 (68-214)||(3289146-3289293)
chr6 (1-194)||(29999573-29999765)
chr6 (68-219)||(35132599-35132751)
chr6 (68-214)||(1860722-1860868)
chr6 (68-214)||(14336905-14337052)
chr6 (76-194)||(33346502-33346620)
chr6 (70-214)||(9173904-9174049)
chr6 (2-173)||(2949452-2949632)
chr6 (68-214)||(12903224-12903371)
chr6 (70-215)||(6220058-6220204)
chr6 (68-204)||(11524778-11524916)
chr6 (68-205)||(24548477-24548615)
chr6 (76-194)||(35119055-35119173)
chr6 (1-223)||(35132761-35132982)
chr6 (68-214)||(2949299-2949441)
chr6 (68-214)||(19135682-19135829)
chr6 (68-190)||(12903447-12903569)
chr6 (68-217)||(13156075-13156220)
chr6 (68-217)||(13160931-13161076)
chr6 (68-214)||(7537841-7537989)
chr6 (1-218)||(17544613-17544839)
chr6 (68-214)||(31029760-31029907)
chr6 (5-75)||(35118974-35119044)
chr6 (78-210)||(1158837-1158968)
chr6 (68-206)||(3338713-3338850)
chr6 (5-75)||(33346631-33346701)
chr6 (68-220)||(29010190-29010343)
chr6 (68-214)||(24548244-24548391)
chr6 (111-206)||(32283037-32283133)
chr6 (68-194)||(2315603-2315729)
chr6 (81-194)||(2814560-2814673)
chr6 (130-214)||(11524708-11524793)
chr6 (78-161)||(33972260-33972344)
chr6 (5-63)||(31754368-31754426)
chr6 (99-220)||(17245590-17245713)
chr6 (68-173)||(31754249-31754354)
chr6 (67-140)||(33329441-33329514)
chr6 (5-75)||(2315732-2315802)
chr6 (68-217)||(17544454-17544603)
chr6 (99-214)||(6229653-6229769)
chr6 (148-220)||(33548173-33548246)
chr6 (177-220)||(33971925-33971969)
chr6 (103-182)||(7162399-7162479)
chr6 (76-127)||(29467200-29467251)
chr6 (1-63)||(24548401-24548463)
chr6 (68-121)||(29999510-29999563)
[»] chr7 (68 HSPs)
chr7 (1-220)||(47250717-47250935)
chr7 (1-214)||(8769442-8769665)
chr7 (1-219)||(10625243-10625472)
chr7 (1-214)||(34568586-34568809)
chr7 (1-220)||(47251057-47251285)
chr7 (1-214)||(23437155-23437378)
chr7 (1-214)||(32706735-32706958)
chr7 (1-214)||(44447917-44448139)
chr7 (8-214)||(9034482-9034698)
chr7 (8-214)||(31715636-31715841)
chr7 (9-194)||(473357-473542)
chr7 (1-211)||(21522226-21522444)
chr7 (5-221)||(11678699-11678925)
chr7 (68-220)||(31715858-31716010)
chr7 (68-214)||(18731022-18731169)
chr7 (68-214)||(23472792-23472939)
chr7 (1-218)||(43726243-43726468)
chr7 (1-165)||(38842085-38842248)
chr7 (1-174)||(9230720-9230903)
chr7 (68-214)||(35085742-35085889)
chr7 (1-225)||(35085899-35086134)
chr7 (68-225)||(43726478-43726636)
chr7 (68-214)||(5238454-5238601)
chr7 (68-218)||(8769281-8769432)
chr7 (29-214)||(23472596-23472791)
chr7 (2-217)||(39118010-39118234)
chr7 (68-219)||(21522454-21522604)
chr7 (83-226)||(43140689-43140833)
chr7 (68-214)||(11678939-11679085)
chr7 (1-205)||(22338284-22338499)
chr7 (68-214)||(26920153-26920300)
chr7 (68-210)||(47250565-47250707)
chr7 (68-220)||(2357064-2357217)
chr7 (63-226)||(41758667-41758834)
chr7 (5-194)||(36506976-36507171)
chr7 (68-206)||(9230913-9231052)
chr7 (4-205)||(28349544-28349754)
chr7 (71-190)||(34568823-34568942)
chr7 (71-220)||(24119711-24119861)
chr7 (22-214)||(2357237-2357438)
chr7 (68-220)||(473189-473339)
chr7 (68-214)||(44486168-44486315)
chr7 (10-205)||(37143776-37143980)
chr7 (68-214)||(32706968-32707114)
chr7 (68-214)||(38842258-38842404)
chr7 (68-214)||(44448148-44448295)
chr7 (70-214)||(44485570-44485715)
chr7 (1-165)||(48703862-48704035)
chr7 (68-218)||(37143999-37144150)
chr7 (68-214)||(47305130-47305277)
chr7 (4-194)||(47305290-47305489)
chr7 (68-173)||(47250942-47251047)
chr7 (68-177)||(23437388-23437497)
chr7 (68-214)||(31623660-31623807)
chr7 (1-63)||(18731179-18731241)
chr7 (1-75)||(26920069-26920143)
chr7 (129-206)||(48704105-48704183)
chr7 (68-121)||(10625180-10625233)
chr7 (1-63)||(5238611-5238673)
chr7 (2-75)||(24119865-24119939)
chr7 (76-173)||(38676103-38676200)
chr7 (146-214)||(10625109-10625178)
chr7 (76-219)||(22338517-22338664)
chr7 (92-194)||(15326896-15326998)
chr7 (10-136)||(15327031-15327166)
chr7 (118-216)||(4156538-4156638)
chr7 (132-194)||(28264652-28264714)
chr7 (76-173)||(40263556-40263652)
[»] chr3 (132 HSPs)
chr3 (1-220)||(52606126-52606344)
chr3 (1-215)||(34521426-34521641)
chr3 (5-206)||(19124345-19124546)
chr3 (1-218)||(12123250-12123466)
chr3 (5-221)||(26332315-26332540)
chr3 (1-214)||(8846236-8846459)
chr3 (1-221)||(41997815-41998045)
chr3 (1-214)||(4846755-4846979)
chr3 (1-214)||(40926171-40926393)
chr3 (2-214)||(44069126-44069348)
chr3 (1-224)||(31514023-31514255)
chr3 (1-214)||(41208561-41208783)
chr3 (1-214)||(45171228-45171450)
chr3 (1-217)||(54081284-54081509)
chr3 (36-214)||(54107672-54107860)
chr3 (1-191)||(28688017-28688216)
chr3 (1-215)||(29248477-29248692)
chr3 (71-214)||(34521269-34521413)
chr3 (68-219)||(40410710-40410862)
chr3 (1-227)||(2829568-2829803)
chr3 (1-217)||(7742775-7742991)
chr3 (1-173)||(35753477-35753657)
chr3 (68-218)||(41208400-41208551)
chr3 (5-214)||(50819381-50819600)
chr3 (5-214)||(50856264-50856483)
chr3 (31-219)||(34629980-34630178)
chr3 (68-221)||(45871693-45871847)
chr3 (24-227)||(7950265-7950478)
chr3 (1-218)||(14353045-14353274)
chr3 (5-194)||(27254008-27254206)
chr3 (70-214)||(26332556-26332705)
chr3 (68-212)||(50819225-50819370)
chr3 (68-212)||(50856494-50856639)
chr3 (68-212)||(53841262-53841407)
chr3 (78-213)||(7274889-7275024)
chr3 (68-219)||(28688226-28688378)
chr3 (68-219)||(54108356-54108508)
chr3 (68-214)||(8846079-8846226)
chr3 (1-214)||(9028194-9028417)
chr3 (68-214)||(10756721-10756868)
chr3 (68-214)||(12123093-12123240)
chr3 (68-214)||(15862411-15862558)
chr3 (4-217)||(53678433-53678656)
chr3 (68-218)||(7743001-7743153)
chr3 (68-214)||(7937799-7937946)
chr3 (68-214)||(27940275-27940422)
chr3 (68-214)||(45171071-45171218)
chr3 (1-220)||(7274650-7274869)
chr3 (1-221)||(52268264-52268493)
chr3 (7-180)||(53841065-53841247)
chr3 (68-220)||(54081519-54081673)
chr3 (1-214)||(15862185-15862401)
chr3 (68-220)||(44069359-44069512)
chr3 (1-219)||(28691112-28691340)
chr3 (68-222)||(14353284-14353438)
chr3 (68-218)||(40926010-40926161)
chr3 (1-194)||(40639277-40639479)
chr3 (1-218)||(40969415-40969641)
chr3 (1-216)||(17273778-17274002)
chr3 (93-219)||(35580210-35580337)
chr3 (68-214)||(43899310-43899457)
chr3 (3-218)||(46766621-46766836)
chr3 (68-215)||(21169668-21169816)
chr3 (68-223)||(35753667-35753823)
chr3 (1-203)||(47891527-47891739)
chr3 (1-213)||(49222040-49222253)
chr3 (68-220)||(37133274-37133427)
chr3 (68-218)||(5348578-5348729)
chr3 (68-219)||(19124187-19124339)
chr3 (68-214)||(40969258-40969405)
chr3 (99-214)||(43899114-43899230)
chr3 (68-214)||(31513866-31514013)
chr3 (68-220)||(17102381-17102534)
chr3 (82-214)||(51170631-51170764)
chr3 (71-214)||(10756947-10757091)
chr3 (111-214)||(52609641-52609745)
chr3 (111-214)||(53310001-53310105)
chr3 (71-190)||(17102616-17102735)
chr3 (72-206)||(45871929-45872064)
chr3 (83-218)||(28691364-28691500)
chr3 (68-221)||(2078708-2078862)
chr3 (68-214)||(9028427-9028574)
chr3 (83-213)||(22354946-22355077)
chr3 (68-216)||(2829408-2829558)
chr3 (68-221)||(17274012-17274166)
chr3 (68-220)||(40639114-40639267)
chr3 (77-194)||(29248343-29248460)
chr3 (99-219)||(33812722-33812843)
chr3 (1-126)||(21169826-21169959)
chr3 (4-123)||(51311685-51311813)
chr3 (5-194)||(5348732-5348930)
chr3 (1-75)||(7937715-7937789)
chr3 (82-214)||(46766863-46766997)
chr3 (1-75)||(54247422-54247496)
chr3 (132-212)||(35753408-35753489)
chr3 (68-144)||(43527068-43527144)
chr3 (5-218)||(51885528-51885751)
chr3 (68-173)||(22444422-22444527)
chr3 (68-214)||(41998055-41998197)
chr3 (68-214)||(33773026-33773174)
chr3 (4-139)||(43527148-43527291)
chr3 (68-218)||(47891749-47891900)
chr3 (77-220)||(21918494-21918637)
chr3 (1-97)||(21918657-21918753)
chr3 (68-194)||(53678669-53678795)
chr3 (68-194)||(49222263-49222387)
chr3 (99-214)||(49529086-49529203)
chr3 (111-220)||(54247269-54247378)
chr3 (1-182)||(2078519-2078698)
chr3 (148-214)||(7937646-7937713)
chr3 (1-105)||(22444299-22444412)
chr3 (68-144)||(52268177-52268254)
chr3 (68-144)||(4846670-4846745)
chr3 (111-214)||(38911497-38911601)
chr3 (132-214)||(13866964-13867047)
chr3 (99-214)||(44316630-44316746)
chr3 (76-214)||(588394-588534)
chr3 (131-214)||(33812842-33812926)
chr3 (76-214)||(50259110-50259250)
chr3 (129-188)||(22444237-22444296)
chr3 (99-165)||(50393370-50393437)
chr3 (129-214)||(51883862-51883948)
chr3 (4-44)||(33772973-33773013)
chr3 (139-214)||(51311825-51311901)
chr3 (91-212)||(20963547-20963670)
chr3 (1-35)||(10756899-10756933)
chr3 (161-214)||(43527026-43527080)
chr3 (93-194)||(43844359-43844461)
chr3 (68-97)||(52606354-52606383)
chr3 (82-165)||(12991394-12991478)
chr3 (3-35)||(17102546-17102578)
chr3 (79-127)||(37174715-37174763)
[»] chr4 (96 HSPs)
chr4 (1-214)||(29864336-29864558)
chr4 (1-214)||(52914955-52915178)
chr4 (1-217)||(1157366-1157592)
chr4 (1-214)||(43317039-43317262)
chr4 (1-222)||(4793759-4793989)
chr4 (1-214)||(28570590-28570804)
chr4 (1-221)||(45911739-45911964)
chr4 (1-215)||(29970195-29970418)
chr4 (2-214)||(40067509-40067731)
chr4 (4-194)||(4965895-4966091)
chr4 (1-219)||(21217845-21218073)
chr4 (1-219)||(34958991-34959219)
chr4 (1-194)||(25218244-25218446)
chr4 (1-216)||(1205379-1205603)
chr4 (1-226)||(24504100-24504335)
chr4 (1-218)||(25058832-25059059)
chr4 (4-213)||(33882112-33882331)
chr4 (1-213)||(33625868-33626090)
chr4 (1-213)||(44710563-44710785)
chr4 (3-206)||(27347608-27347821)
chr4 (2-214)||(38866401-38866624)
chr4 (1-218)||(46620926-46621153)
chr4 (74-214)||(21218089-21218230)
chr4 (1-214)||(45683277-45683500)
chr4 (68-217)||(45911579-45911729)
chr4 (68-221)||(54136087-54136241)
chr4 (1-219)||(9010665-9010893)
chr4 (68-214)||(33626100-33626247)
chr4 (1-214)||(46200645-46200868)
chr4 (68-217)||(25218084-25218234)
chr4 (68-212)||(27347833-27347978)
chr4 (3-220)||(22830959-22831187)
chr4 (71-221)||(46200480-46200632)
chr4 (4-214)||(46535526-46535745)
chr4 (76-214)||(9010508-9010647)
chr4 (1-210)||(10014624-10014842)
chr4 (1-210)||(10021765-10021983)
chr4 (68-213)||(44432860-44433006)
chr4 (68-221)||(46621163-46621317)
chr4 (68-214)||(43316883-43317029)
chr4 (68-194)||(53645475-53645601)
chr4 (68-220)||(37515689-37515842)
chr4 (36-222)||(8246941-8247137)
chr4 (68-219)||(29864174-29864326)
chr4 (1-220)||(54136251-54136476)
chr4 (68-214)||(10014468-10014614)
chr4 (68-214)||(10021609-10021755)
chr4 (68-217)||(2738880-2739030)
chr4 (71-212)||(12381293-12381435)
chr4 (7-214)||(54191751-54191967)
chr4 (77-220)||(48209945-48210089)
chr4 (68-214)||(8751290-8751437)
chr4 (10-214)||(9657670-9657884)
chr4 (68-214)||(25593327-25593474)
chr4 (68-214)||(44710406-44710553)
chr4 (76-214)||(18862684-18862824)
chr4 (71-214)||(34958835-34958978)
chr4 (68-214)||(32384656-32384803)
chr4 (17-182)||(21885000-21885174)
chr4 (68-194)||(52915179-52915305)
chr4 (68-220)||(40067345-40067498)
chr4 (5-214)||(21051362-21051580)
chr4 (68-214)||(1205613-1205760)
chr4 (71-214)||(8246772-8246914)
chr4 (68-228)||(32385048-32385208)
chr4 (68-214)||(24503942-24504090)
chr4 (68-217)||(1157203-1157356)
chr4 (68-214)||(11242705-11242847)
chr4 (76-217)||(25977768-25977911)
chr4 (68-214)||(45683120-45683267)
chr4 (68-173)||(21051583-21051688)
chr4 (68-173)||(44428616-44428721)
chr4 (68-214)||(4966104-4966251)
chr4 (68-194)||(43969763-43969889)
chr4 (68-165)||(54191641-54191738)
chr4 (76-226)||(15985457-15985609)
chr4 (75-218)||(11102217-11102362)
chr4 (77-220)||(44169976-44170121)
chr4 (1-97)||(12381188-12381280)
chr4 (68-165)||(42779573-42779670)
chr4 (68-217)||(38866635-38866786)
chr4 (76-212)||(22830801-22830939)
chr4 (112-221)||(37515525-37515634)
chr4 (68-214)||(46535758-46535905)
chr4 (1-75)||(53645611-53645684)
chr4 (1-145)||(43969598-43969753)
chr4 (1-52)||(44432799-44432850)
chr4 (5-63)||(42779673-42779731)
chr4 (76-220)||(9657891-9658036)
chr4 (7-61)||(32384818-32384872)
chr4 (134-219)||(44428511-44428597)
chr4 (68-138)||(29970428-29970498)
chr4 (3-214)||(44170141-44170364)
chr4 (167-214)||(4965844-4965891)
chr4 (176-214)||(29970517-29970555)
chr4 (177-214)||(10017818-10017856)
[»] scaffold0188 (2 HSPs)
scaffold0188 (5-217)||(13705-13927)
scaffold0188 (69-219)||(13540-13690)
[»] chr5 (82 HSPs)
chr5 (5-214)||(7399080-7399300)
chr5 (1-220)||(19205103-19205332)
chr5 (1-220)||(35263654-35263883)
chr5 (1-226)||(8418192-8418412)
chr5 (1-219)||(10656092-10656320)
chr5 (1-220)||(29023934-29024160)
chr5 (1-214)||(42710510-42710733)
chr5 (1-214)||(38416146-38416360)
chr5 (2-213)||(5087811-5088032)
chr5 (4-214)||(7210619-7210828)
chr5 (1-218)||(12593616-12593843)
chr5 (1-214)||(40589214-40589437)
chr5 (1-214)||(40589817-40590040)
chr5 (1-213)||(31656361-31656584)
chr5 (1-214)||(40774341-40774563)
chr5 (68-214)||(9692922-9693068)
chr5 (2-214)||(9693079-9693301)
chr5 (1-213)||(12694846-12695068)
chr5 (4-206)||(28391932-28392145)
chr5 (5-213)||(15267403-15267622)
chr5 (68-214)||(40589057-40589204)
chr5 (68-214)||(40589660-40589807)
chr5 (1-219)||(25923278-25923506)
chr5 (5-206)||(26289031-26289242)
chr5 (17-214)||(33763086-33763290)
chr5 (1-214)||(36751905-36752128)
chr5 (2-214)||(17861199-17861413)
chr5 (1-214)||(39706058-39706277)
chr5 (5-214)||(16353154-16353376)
chr5 (68-219)||(3878479-3878631)
chr5 (76-214)||(18514291-18514430)
chr5 (68-213)||(39706287-39706433)
chr5 (68-221)||(41859913-41860069)
chr5 (68-214)||(334299-334446)
chr5 (70-212)||(7210461-7210604)
chr5 (68-214)||(31656594-31656741)
chr5 (76-214)||(33699278-33699417)
chr5 (7-219)||(31909096-31909318)
chr5 (68-214)||(10656330-10656477)
chr5 (68-214)||(12593459-12593606)
chr5 (68-214)||(19204947-19205093)
chr5 (68-214)||(35263497-35263644)
chr5 (16-205)||(41372333-41372532)
chr5 (1-226)||(15476257-15476485)
chr5 (68-219)||(38416370-38416522)
chr5 (68-214)||(16353390-16353537)
chr5 (76-218)||(15476503-15476645)
chr5 (68-190)||(31908958-31909080)
chr5 (68-216)||(25923119-25923268)
chr5 (68-215)||(5624381-5624529)
chr5 (84-222)||(7399330-7399470)
chr5 (1-214)||(43569930-43570154)
chr5 (5-205)||(5152780-5152989)
chr5 (76-214)||(32272084-32272223)
chr5 (4-219)||(14143668-14143893)
chr5 (68-220)||(15670387-15670540)
chr5 (68-214)||(33762904-33763055)
chr5 (83-214)||(8418435-8418567)
chr5 (69-220)||(40774574-40774726)
chr5 (1-75)||(334456-334530)
chr5 (76-212)||(28391773-28391911)
chr5 (68-218)||(15267241-15267389)
chr5 (90-224)||(5088386-5088521)
chr5 (1-105)||(41859790-41859903)
chr5 (1-126)||(5624539-5624672)
chr5 (127-214)||(21750813-21750901)
chr5 (76-218)||(14051888-14052031)
chr5 (114-204)||(17736529-17736620)
chr5 (68-206)||(17861050-17861188)
chr5 (68-214)||(36752138-36752284)
chr5 (82-214)||(42710353-42710486)
chr5 (68-220)||(14143509-14143658)
chr5 (125-221)||(3879305-3879402)
chr5 (68-214)||(5152619-5152766)
chr5 (69-211)||(26289257-26289400)
chr5 (146-222)||(5460183-5460260)
chr5 (5-75)||(3878645-3878715)
chr5 (76-225)||(2597328-2597478)
chr5 (158-217)||(5460272-5460332)
chr5 (1-63)||(21750952-21751011)
chr5 (99-219)||(19185514-19185636)
chr5 (175-218)||(19615421-19615465)
[»] scaffold0236 (2 HSPs)
scaffold0236 (7-202)||(11228-11433)
scaffold0236 (68-221)||(11450-11604)
[»] scaffold1436 (2 HSPs)
scaffold1436 (1-210)||(1483-1701)
scaffold1436 (68-173)||(1711-1815)
[»] scaffold0809 (2 HSPs)
scaffold0809 (10-214)||(4487-4701)
scaffold0809 (68-219)||(4336-4488)
[»] scaffold0168 (2 HSPs)
scaffold0168 (68-214)||(11723-11870)
scaffold0168 (5-214)||(11491-11709)
[»] scaffold0051 (2 HSPs)
scaffold0051 (68-214)||(40588-40735)
scaffold0051 (5-214)||(40355-40574)
[»] scaffold0045 (4 HSPs)
scaffold0045 (68-226)||(65730-65889)
scaffold0045 (68-226)||(73062-73221)
scaffold0045 (1-214)||(65899-66122)
scaffold0045 (1-214)||(73231-73454)
[»] scaffold0128 (2 HSPs)
scaffold0128 (68-214)||(45072-45219)
scaffold0128 (1-75)||(44988-45062)
[»] scaffold0012 (2 HSPs)
scaffold0012 (68-214)||(177301-177448)
scaffold0012 (22-75)||(177228-177281)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-211)||(90811-91033)
scaffold0016 (7-165)||(91674-91841)
[»] scaffold0444 (2 HSPs)
scaffold0444 (68-173)||(11713-11818)
scaffold0444 (134-219)||(11637-11723)
[»] scaffold0022 (2 HSPs)
scaffold0022 (76-214)||(93191-93332)
scaffold0022 (1-151)||(93350-93509)
[»] scaffold0193 (1 HSPs)
scaffold0193 (137-220)||(25964-26048)
[»] scaffold0225 (1 HSPs)
scaffold0225 (76-221)||(10863-11010)
[»] scaffold0430 (1 HSPs)
scaffold0430 (3-44)||(6107-6148)
[»] scaffold0042 (1 HSPs)
scaffold0042 (76-124)||(90254-90302)


Alignment Details
Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 129)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 46738888 - 46739117
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||         |||||||| |||||||||||||||    
T  46738888 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaatttcagaagaaaatgaagaaaatctaatgtttttgaattaaaa 46738987  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttag 195  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46738988 ctaacggaaatgactaaaatgtgtaacagagagaagttaagcgaccaaagtaaatcgaattttaattaagggaccaaagtgatactacctaaatagttag 46739087  T
Q  196 ggaccaaaaatgcaatttaaccttttattt 225  Q
    ||  ||||||| ||||||| ||||||||||    
T  46739088 gggacaaaaatacaatttagccttttattt 46739117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 32564176 - 32563953
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||  ||| ||||||||||||||| | ||    
T  32564176 ctcctctttttcattttcatatcatctccatcaacattcaacaacaagaattccagaaaaatttcagaagaaaacataatgtttttgaattaaaattaac 32564077  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||| ||||||    
T  32564076 ggaaatgaccaaaatgtgtaacagaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatacagcctaaatagttaagggac 32563977  T
Q  200 caaaaatgcaatttaaccttttat 223  Q
    ||||||||||||||| ||||||||    
T  32563976 caaaaatgcaatttagccttttat 32563953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 29257049 - 29256831
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| ||    
T  29257049 ctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcccagcaaaattccagaagaaaatctaacgtttttgaattaaaactaac 29256950  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
     |||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  29256949 agaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaagggac 29256850  T
Q  200 caaaaatgcaatttaacct 218  Q
    |||||||  ||||||||||    
T  29256849 caaaaatataatttaacct 29256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 22584577 - 22584357
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||| ||    
T  22584577 ctcctctttttcatcttcatatcatctccgtcaaccttcaacaacaagaatcccagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttgattt 22584478  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  22584477 aaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaatgtgatactacctaaatag 22584378  T
Q  192 tt-agggaccaaaaatgcaat 211  Q
    || || ||| |||||||||||    
T  22584377 ttaagagacaaaaaatgcaat 22584357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 25088242 - 25088019
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         |||| |||||||||||    
T  25088242 ctccactttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaatgtttttgaatt 25088143  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||    
T  25088142 aaaactaaccgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaatag 25088043  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  25088042 ttaagggaccaaaaatgcaattta 25088019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 34028885 - 34029104
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||         ||||||||||||||||||||    
T  34028885 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaa 34028984  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || ||||||| ||| ||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  34028985 ctaacggaaaggaccaaaatgtataacaaagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaagtgatactacctaaatagttaa 34029084  T
Q  195 gggaccaaaaatgcaattta 214  Q
    ||||||||||||||||||||    
T  34029085 gggaccaaaaatgcaattta 34029104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 51692100 - 51691877
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||         ||||| ||||||||||    
T  51692100 ctcctctttctcatcttcatatcatcttcatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacatttttgaatt 51692001  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||| |||||||| || ||||||||||||||||| |||||||| ||||||||||||||||    
T  51692000 aaaactaacggaaatgaccaaaatgtgtaatagagagaagttaatggaccaaaatagatcgaattttaattaagggaccaaagcgatactacctaaatag 51691901  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  51691900 ttaagggaccaaaaatgcaattta 51691877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 51810364 - 51810141
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaa-tttcataagaaaat---------ctaacgtttttgaat 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||         |||| ||||||||||    
T  51810364 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaaatttcaaaagaaaatgaaaaaaacctaatgtttttgaat 51810265  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| ||||||||||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  51810264 taaaactaacggaaatgaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaata 51810165  T
Q  191 gtt-agggaccaaaaatgcaattt 213  Q
    ||| || ||| |||||||||||||    
T  51810164 gttaagagactaaaaatgcaattt 51810141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 37199147 - 37198928
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||  | |  |||||| |||||||||||||||||||||| ||    
T  37199147 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaataaaatga--agaaaacctaacgtttttgaattaaaactaac 37199050  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||| |||| | ||||||||||| ||  ||    
T  37199049 ggaaaagaccaaaatgtgtaacagatagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatattgcctaaatagttaagaaac 37198950  T
Q  200 caaaaatgcaatttaacctttt 221  Q
    ||||||| ||||||| ||||||    
T  37198949 caaaaatacaatttagcctttt 37198928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 10654254 - 10654033
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||    
T  10654254 tcctctttttcatcttcatatcatctctgtcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgatgagaacctaacgtttttgaatta 10654155  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||| ||| ||| |||||||||||| || |||||||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||||||| |    
T  10654154 aaactaacgaaaaggaccaaaatgtgtaacggacagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcg-tactacctaaataat 10654056  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | |||||||||||||||||||||    
T  10654055 taagggaccaaaaatgcaattta 10654033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 37199157 - 37199308
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||||||||| |    
T  37199157 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccagaataaatcgaattttaattaaggg 37199256  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37199257 accaaagtgatactacctaaatagttaaggaaccaaaaatgcaatttaacct 37199308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 10654265 - 10654414
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  10654265 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaggg 10654364  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaac 216  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  10654365 accaaagcgatactacctaaatagttaagggaccaaaaatgcaaattaac 10654414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 23281249 - 23281393
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  23281249 aaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagagaagttatgggaccaaaataaatcgaattttaattaagggacc 23281348  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||| |||||||||||||||||| |||||||||||||||||||||    
T  23281349 aaagcgatactacctaaatagttaagggaccaaaaatgcaattta 23281393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 33753386 - 33753605
Alignment:
Q  11 tcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacg 101  Q
    |||| |||||| |||||||||||||||||||||||||||| | |||||||||| || || |||||         |||||||||||||||||||||| |||    
T  33753386 tcatcttcataccatctccatcaaccttcaacaacaagaacctcagaaaaattccagaacaaaatgaagaaaacctaacgtttttgaattaaaactaacg 33753485  T
Q  102 gaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-gggacc 200  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||    
T  33753486 gaaaagactaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttatgggacc 33753585  T
Q  201 aaaaatgcaatttaacctttt 221  Q
     ||||| ||||||| ||||||    
T  33753586 -aaaatacaatttagcctttt 33753605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 52412834 - 52412986
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |    
T  52412834 aagaaaatctaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaaggg 52412933  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||| ||||    
T  52412934 accaaagtgataccacctaaatagttaagggaccaaaaatgtaatttagcctt 52412986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 4045325 - 4045098
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||         ||||||||||||||||    
T  4045325 ctcctcttattcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaacacctaacgtttttgaatt 4045226  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||   | ||||||||| |||||||||||||||||||| |||||||| |||| ||||| |||||||||||||| |||||||  ||||||||||||||||    
T  4045225 aaaatcaatggaaatgaccaaaatgtgtaacagagagaatttaagggatcaaaataaattgaattttaattaagggaccaaaacgatactacctaaatag 4045126  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || |||| | |||||| |||||||||||    
T  4045125 ttaaggggctaaaaatacaatttaacct 4045098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 4 - 217
Target Start/End: Original strand, 30293176 - 30293398
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||         ||||| |||||||||||||    
T  30293176 ctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccagagaaattccagaagaaaatgaaaaaaacctaacatttttgaattaaa 30293275  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| | |||||  || ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||  || ||||| ||||||||||||||||||     
T  30293276 actaatggaaaataccaaaatgtgtaacatagagaagttaagg-accaaaataaatcgaattttaattaaaggatcaaagcgatactacctaaatagtta 30293374  T
Q  194 agggaccaaaaatgcaatttaacc 217  Q
    ||||||||||||||||||||||||    
T  30293375 agggaccaaaaatgcaatttaacc 30293398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6181842 - 6181616
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| | |||||||||||||||||| ||||||||||||| ||||| ||||||| || ||||||||         ||||||||||||||||    
T  6181842 ctcctctttttcatctccatatcatctccatcaactttcaacaacaagagtcccaaaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 6181743  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||| |||||  |||||||||||| |||||||| ||||||||||||||||||||  ||||||| ||||||| |||||||     
T  6181742 aaaactaacggaaatgaccaaaatatgtaatggagagaagttaaaggaccaaaataaatcgaattttaattaaggaaccaaagcgatactaactaaataa 6181643  T
Q  192 tt-agggaccaaaaatgcaatttaacc 217  Q
    || ||||| ||||||||||||||||||    
T  6181642 ttaagggatcaaaaatgcaatttaacc 6181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 13944675 - 13944894
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||||||    
T  13944675 tctttttcatcttcatatcatattcatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaataaaacctaacgtttttgaattaaaa 13944774  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat-agtta 194  Q
    || ||||||||||| ||||| |||||| |||| |||||||||||||||| ||||||||||| |||||||| || ||||  |||||||||||||| | | |    
T  13944775 ctaacggaaatgaccaaaatttgtaacggagaaaagttaagggaccaaaataaatcgaattctaattaagggatcaaaacgatactacctaaatgattaa 13944874  T
Q  195 gggaccaaaaatgcaattta 214  Q
    |||||||||||| |||||||    
T  13944875 gggaccaaaaatacaattta 13944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 24590461 - 24590600
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||  |    
T  24590461 aagaaaatctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagagaccaaaataaattgaattttaattaaagg 24590560  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  24590561 accaaagtgatactacctaaatagttaagggaccaaaaat 24590600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 50921210 - 50921063
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||| | ||||||||||| ||||||| |||||||||||| |    
T  50921210 aagaaaatctaacgtttttgaattaaaactaacgaaaaaaactaaaatgtgtaacagagagaaatcaagggaccaaaataaatcggattttaattaaggg 50921111  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  50921110 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 50921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 42607672 - 42607522
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |    
T  42607672 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaatttaaattaaggg 42607573  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||  |||| || |||||||||| ||||||||||||||||||||||||    
T  42607572 accaaaacgatattatctaaatagttaagggaccaaaaatgcaatttaacc 42607522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 36657665 - 36657883
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||||          || ||||||||||||||||||||||||||||    
T  36657665 tctttttcatcttcatatcatctccatcaaccttcaacaacaaaaattccataaaaattctggaagaaaatgaagaaaatctaacgtttttgaattaaaa 36657764  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || | ||||||||| ||||||||||| ||| ||||||||||| |||||| |||||||||||||||||||| |||||||| |||||| | ||||||||| |    
T  36657765 ctaatggaaatgaccaaaatgtgtaatagacagaagttaaggaaccaaaataaatcgaattttaattaagggaccaaagcgatactgcataaatagttaa 36657864  T
Q  195 gggaccaaaaatgcaattt 213  Q
    |||||||||||| ||||||    
T  36657865 gggaccaaaaatacaattt 36657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 18793838 - 18793694
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  18793838 aaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaagggacc 18793739  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||| ||||||||||||||| || |||||||||||||| ||||||    
T  18793738 aaagcgatactacctaaataattaagggaccaaaaatgaaattta 18793694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 75 - 214
Target Start/End: Original strand, 45305653 - 45305792
Alignment:
Q  75 tctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||| |||||||||| ||| ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  45305653 tctaacgttttttaattaaaactaacgtaaatgaccaaaatgtgtaacagagaga-gttaagggaccaaaataaatcgaattttaattaagggaccaaag 45305751  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45305752 tgatactacctaaatagttaagggaccaaaaatgcaattta 45305792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 50574737 - 50574525
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| |||||||||||||||||||| |||||||| || ||||||| ||||||| || ||||||||         | || ||| |||| |||||    
T  50574737 ctctttttcatattcatatcatctccatcaactttcaacaaaaataatcccataaaaattccagaagaaaatggagaaaaccgaaagttattgagttaaa 50574638  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||| |||||||||||||||||||    
T  50574637 actaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaatagaccaaagcgatactacctaaatagtta 50574538  T
Q  195 gggaccaaaaatg 207  Q
     ||  ||||||||    
T  50574537 agggacaaaaatg 50574525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 14118680 - 14118533
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||| | |||||| ||||||||||||||||||||      
T  14118680 aagaaaacctaacgtttttgaattaaaactaacggaaaagactaaaatgtgtaacggagaaaagttaaagtaccaaaataaatcgaattttaattaagga 14118581  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  14118580 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 14118533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 30293163 - 30293012
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||||| |||||||||||||||| ||| |    
T  30293163 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtataacatagagaagttaagagaccaaaataaatcgaattttaataaagag 30293064  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||    
T  30293063 accaaagcgatactacctaaatagttaatggaccaaaaatgcaatttaacct 30293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 33753375 - 33753228
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||| | |||||||||| |||||||| |||||||||||||||||||| |    
T  33753375 aagaaaagctaacgtttttgaattaaaactaacggaaaagacaaaaatgtgtaactgggagaagttaaaggaccaaaataaatcgaattttaattaaggg 33753276  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  33753275 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 33753228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 34028871 - 34028724
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| | |||||||||||||||||| ||||| |||||||| ||||| |    
T  34028871 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaatagaagttaagggaccaaaataaattgaattttagttaaggg 34028772  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  34028771 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 34028724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34279466 - 34279243
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||         |||||| |||||||||    
T  34279466 ctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttgaatt 34279367  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| |||  || |||||| |||||  | |||||||||| ||||||| ||||| |||||||||||||| |||||||| | ||||||||||||||    
T  34279366 aaaactaacgaaaagaaccaaaatgcgtaacgaaaagaagttaagagaccaaaataaattgaattttaattaagggaccaaagcgttactacctaaatag 34279267  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||||||||||    
T  34279266 ttaagagaccaaaaatgcaattta 34279243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18793852 - 18794076
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||         |||||| |||||||||    
T  18793852 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaaaacctaacgcttttgaatt 18793951  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtg--atactacctaaat 189  Q
    |||||| ||| |||  || ||| ||||||||  | |||||||||||||||||| |||||||||||||||||||| |||||||| |  ||||||| |||||    
T  18793952 aaaactaacgaaaagaaccaaa-tgtgtaacgaaaagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatatactacttaaat 18794050  T
Q  190 agtt-agggaccaaaaatgcaattta 214  Q
    |||| |||||||||||||||||||||    
T  18794051 agttaagggaccaaaaatgcaattta 18794076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 24590451 - 24590250
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||        || ||||||||||||||||||||||||    
T  24590451 ctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccagaaaa-tttctgaagaaaatgaagaaaatctaacgtttttgaatt 24590353  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||  ||| ||||||||||||||||| ||| || ||||  ||||||| |||||||||||||||||||| |||||||| |||||||| |||||||    
T  24590352 aaaactaacataaaggactaaaatgtgtaacatagacaaattaatagaccaaaataaatcgaattttaattaagggaccaaagcgatactacttaaatag 24590253  T
Q  192 tta 194  Q
    |||    
T  24590252 tta 24590250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 50574753 - 50574906
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| || |||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |    
T  50574753 aagaaaacctaacgttttttaattaaaactaaccgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaaggg 50574852  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  50574853 accaaaacgatactacctaaatagttaagggaccaaaaatgcaatctaaccttt 50574906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 30611380 - 30611604
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | |  ||||||||         ||||||||||||||||    
T  30611380 ctcctctttttcatcttcatatcatctccatcaacattcaacaacaagaatcccaaaaaaaatccggaagaaaatgaagaaaacctaacgtttttgaatt 30611479  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggacc-aaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||||| ||| ||||||| ||||||||||||| ||| ||| ||||||||| ||| ||||||||||||||||| || |||||||| ||||| |||||||||    
T  30611480 aaaactaacgaaaatgaccaaaatgtgtaacaaagaaaagataagggaccaaaaataaatcgaattttaatttagggaccaaagcgatacaacctaaata 30611579  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| ||||| ||||||| |||||||    
T  30611580 gttaagggatcaaaaatacaattta 30611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 34279479 - 34279631
Alignment:
Q  71 aaaatctaacgtttttgaattaaaa-cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||||||||| ||| |||| || ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  34279479 aaaatataacgtttttaaataaaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggac 34279578  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  34279579 caaaatgatactacctaaatagttaagggaccaaaaatgcaatttagcctttt 34279631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 52412820 - 52412608
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| ||||||||||||   ||||||||||||||||| |||||| |||||||| || || |||||         |||||||||| |||||||||    
T  52412820 tctttttcatcttcatatcatctttttcaaccttcaacaacaaaaatcccggaaaaattccagaaaaaaataaaaaaaacctaacgttttggaattaaaa 52412721  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || | ||||| ||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||| |    
T  52412720 ctaatggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaa 52412621  T
Q  195 gggaccaaaaatg 207  Q
    |||||||||||||    
T  52412620 gggaccaaaaatg 52412608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 4045335 - 4045494
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| | ||||| |||||||||||||| |||||| ||||||| |||| ||| |||||||||||||||||||| |    
T  4045335 aagaaaacctaacgtttttgaattaaaactaatggaaaggactaaaatgtgtagcagagaaaagttaaaggactaaaataaatcgaattttaattaagag 4045434  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||| |||||| ||||    
T  4045435 accaaagtgatactacttaaatagttaagggaccaaacatgcaatttagccttttttttt 4045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11394820 - 11395043
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||| ||||| || | ||||         ||||||||| ||||||||||    
T  11394820 ctcctcttgttcatcttcatatcatctccatcaactttcaacaacaagaattccaaaaaaaatttagaagaaaatgaagaaaatctaacatttttgaatt 11394919  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||||||| || | |||||||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||||   | |||||||||||||    
T  11394920 aaaactaacggaaataaccataatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggatcaaaacaaaactacctaaatag 11395019  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  11395020 ttaagggaccaaaaatgcaattta 11395043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 16267865 - 16267718
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||  |||| |||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  16267865 aagaaaacctaacgtttttgaattaaaaccaacggtaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 16267766  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  16267765 accaaagcgatattacctaaatagttaagggaccaaaaatgcaattta 16267718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 19986358 - 19986505
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||||||| |||||| ||||||| ||||| |    
T  19986358 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaagagaaagaagttaaaggaccaaaataaatcaaattttatttaagag 19986457  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  19986458 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 19986505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 30792666 - 30792443
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatcta---------acgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| || |||| |||  |         |||||||||||||    
T  30792666 ctcctctttttcatcttcatatcatctccatcaactttcaataacaagaatcctagaaaaattccagaagataatgaagaaaacttgacgtttttgaatt 30792567  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||  ||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||| ||||| || ||||| || | |||||||||||    
T  30792566 aaaactaacataaatgaccaaaatgtgtaacagagaaaagataagggaccaaaataaatcgaattttatttaagggatcaaagcgacagtacctaaatag 30792467  T
Q  192 tta-gggaccaaaaatgcaattta 214  Q
    ||| ||||||||||||||||||||    
T  30792466 ttaggggaccaaaaatgcaattta 30792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 27209391 - 27209181
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||         |||||| |||||||||||||    
T  27209391 tcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccataagaaaatgaagaaaacctaacggttttgaattaaaa 27209292  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || ||||||||||| ||||||||||||  ||| ||||||||  |||||| |||||| ||||||||||||| ||||||||||||| ||  ||||||||| |    
T  27209291 ctaacggaaatgaccaaaatgtgtaacgaagataagttaagataccaaaataaatcaaattttaattaagggaccaaagtgatattaattaaatagttaa 27209192  T
Q  195 gggaccaaaaa 205  Q
    |||||||||||    
T  27209191 gggaccaaaaa 27209181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 49291219 - 49291377
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||||||| |||||| || |||||||| ||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |    
T  49291219 aagaaaatctaacgtttttgaatcaaaactaaccgaaatgaccaaaatgtgtaacatagagaaattaagggaccaaaataaatcgaattttaattaaggg 49291318  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttattt 225  Q
    ||||||  ||||||| |||||||||| |||||| |||||||||||||||| || |||||    
T  49291319 accaaaacgatactatctaaatagttaagggacgaaaaatgcaatttaactttgtattt 49291377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 10923589 - 10923373
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaatt 91  Q
    |||||||||||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||||          |||||||||||||||    
T  10923589 ctcctctttttcatctttatatcatctccatcaaccttcaacaataagaatcccaaaaaagtttcagaagaaaatgaagaaaacataacgtttttgaatt 10923490  T
Q  92 aaa-acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||| ||| || |||||||| |||||||||||| |||| ||||||||||| |||| |||||| ||||||| ||||| |||||||| |||||||||||||||    
T  10923489 aaatactaaccgaaatgaccaaaatgtgtaacggagaaaagttaagggatcaaaataaatcaaattttacttaagggaccaaagcgatactacctaaata 10923390  T
Q  191 gtt-agggaccaaaaat 206  Q
     || |||||||||||||    
T  10923389 attaagggaccaaaaat 10923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 10923599 - 10923751
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |    
T  10923599 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaaggg 10923698  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| ||||| || ||||||||| ||||||||||||||||||||| ||||    
T  10923699 accaaagcgataccacttaaatagttaagggaccaaaaatgcaatttagcctt 10923751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 9881701 - 9881555
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | | ||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||| || |    
T  9881701 aagaaaacctaacgtttttgaattaaaattaatggaaaagaccaaaatgtgtaac-gagagaagttaagggaccaaaataaatcgaattttaatttaggg 9881603  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  9881602 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 9881555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 11787890 - 11787743
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||| |||| ||||||||||||||||||||| ||| || ||||||||||||| |    
T  11787890 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtataacggagagaagttaagggaccaaaataattcaaattttaattaaggg 11787791  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||| ||||||| |||||||    
T  11787790 accaaagcgatactacctaaatagttaagggatcaaaaattcaattta 11787743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 24655746 - 24655969
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |  ||||||||         ||||||||||||||||    
T  24655746 ctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcctagaaaaattcctgaagaaaattaagaaaacctaacgtttttgaatt 24655845  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || | || ||| |||||||||||| || ||||||||| ||  |||| |||||||||||||||||| | |||||||| |||||||| |||||||    
T  24655846 aaaactaaccggaaggaccaaaatgtgtaacggatagaagttaatggctcaaaataaatcgaattttaattacgagaccaaagcgatactacttaaatag 24655945  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||| ||||||||||||||    
T  24655946 ttaagagactaaaaatgcaattta 24655969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 50118497 - 50118347
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||| ||||||  |||||||||||||||||||| ||||| ||||||| ||||||||||| |||||||| |    
T  50118497 aagaaaacctaacatttttgaattaaaactaacgaaaatgatcaaaatgtgtaacagagagaaattaagagaccaaaataaatcgaattgtaattaaggg 50118398  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||||||    
T  50118397 accaaagcgatactacctaaatagttaagggaccaaaaatacaatttaacc 50118347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 36884875 - 36885037
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||  | |  || ||| ||||| ||||| |||||||| | ||    
T  36884875 ctcctctttttcatcttcatatcatccccatcaaccttcaacaacaagaatcccagaataaaatga--agtaaacctaacattttttaattaaaattaac 36884972  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  36884973 ggaaatgacaaaaatgtgtaacagagataagttaaggaaccaaaataaatcgaattttaattaag 36885037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 11797397 - 11797220
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat--------ctaacgtttttgaattaaaa 95  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||        ||||| || |||||||||||    
T  11797397 ctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatcccaaaaaaaattcagaagaaaatgaagaaacctaacattcttgaattaaaa 11797298  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    || ||||||| ||| ||||||| |||| |||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  11797297 ctaacggaaaggaccaaaatgtataacggagagaggttaagggaccaaaataaatcgaattttaattaagggaccaaa 11797220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 28970569 - 28970417
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| |||||| |||||||||| ||||||| ||| ||||||||||||||||||||||| | |||||||| |||||||||||||||||||  |    
T  28970569 aagaaaacctaatgttttttaattaaaactaacggaaaagaccaaaatgtgtaacagagagaagttcatggaccaaaataaatcgaattttaattaaagg 28970470  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  28970469 accaaagcgatactacctaaatagttaaaggaccaaaaatgcaatttagcctt 28970417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 50921224 - 50921372
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||    
T  50921224 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaataaaacctaacgtttttgaattaaaa 50921323  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    || |  |||||||| |||||||||||| |||||||||||||||||||||    
T  50921324 ctaattgaaatgaccaaaatgtgtaactgagagaagttaagggaccaaa 50921372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 1831831 - 1832050
Alignment:
Q  8 ttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaactt 98  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||||||         ||||||||||||||||||||||     
T  1831831 ttttcatcttcatatcatctccaccaaccttcaagaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaacta 1831930  T
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    ||||||||||| | ||| | |||| |||| |||||||| ||| ||| |||||||||||||||||||  ||| |||  |||||||| || |||||| ||||    
T  1831931 acggaaatgaccataatatataacggagaaaagttaagagacgaaaataaatcgaattttaattaaaggactaaaacgatactacatatatagttaaggg 1832030  T
Q  198 accaaaaatgcaatttaacc 217  Q
    ||||||||| ||||||||||    
T  1832031 accaaaaatacaatttaacc 1832050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 14775971 - 14776118
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | ||||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||||||||||||| |    
T  14775971 aagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaacagggagaatttaagagaccaaaataaatcgaattttaattaaggg 14776070  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||  |||||||||||||||||| || ||||||||||||||||||    
T  14776071 aacaaaacgatactacctaaatagttaagtgaccaaaaatgcaattta 14776118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 16267926 - 16268072
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||| |    
T  16267926 aagaaaacctaacgtttttgaattaaaactaacagaaagaaccaaaatgtgtaacggagagaagttaa-ggaccaaaataaatcaaattttaattaaggg 16268024  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  16268025 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 16268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 30611370 - 30611219
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| |  |||||||| ||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  30611370 aagaaaacctaacgttttttaattaaaactaatagaaatgaccaaattatgtaacagagagaagttaagggactaaaataaatcgaattttaattaaggg 30611271  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    | |||||||||| || |||||||||| |||||||||||||||||||||||||    
T  30611270 atcaaagtgataatatctaaatagttaagggaccaaaaatgcaatttaacct 30611219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 32517751 - 32517899
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||| ||||| |||| |||||| ||||||||||||   ||    
T  32517751 gaaaatctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaatgagagaagttgagggatcaaaataaatcaaattttaattaa--aac 32517848  T
Q  170 caaagtgatactacctaaatag-ttagggaccaaaaatgcaatttaacctt 219  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||||||    
T  32517849 caaagtgatactacctaaatagataagggatcaaaaatgcaatttaacctt 32517899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 32564186 - 32564332
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||  |||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||| |    
T  32564186 aagaaaacctaatatttttgaattaaaactaacggaaatgaccaaaatgtgtaac-gatagaagttaagggaccaaaataaatcgaattttaattaaggg 32564284  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||    
T  32564285 accaaagcgatactacctaaatagttaaaggactaaaaatgcaattta 32564332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 35986382 - 35986235
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||||||| |||||||||| | | ||||||||||| ||||||| |||||||||||||||||||| |    
T  35986382 aagaaaacctaacgtttttgaattaaaactaacataaatgaccaaaatgtgtatcggcgagaagttaagagaccaaaataaatcgaattttaattaaggg 35986283  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  35986282 accaaagcgatactacctaaatagttaagggaacaaaaatgcaattta 35986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 51692107 - 51692253
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  51692107 aagaaaacctaacgtttttgaattaaaactaacgaaaaggaccaaaatgtgtaac-gagagaagttaagggaccaaaataaatcgaattttaattaatgg 51692205  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  |||| ||||||||||||| |||||||||||||||||||||    
T  51692206 accaaaacgatattacctaaatagttaagggaccaaaaatgcaattta 51692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 24655736 - 24655586
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| | | ||||||||||||| |||||||||||| ||||||| | |||||||||||||||||| |    
T  24655736 aagaaaacctaacgtttttgaattaaaactaacagaaaggcccaaaatgtgtaacaaagagaagttaagagaccaaaatgaatcgaattttaattaagag 24655637  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||| ||||||||||||||| || |||||||||| |||||||||||||    
T  24655636 accaaagcgatactacctaaatacttaagggaccaaatatgcaatttaacc 24655586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 206
Target Start/End: Original strand, 22584602 - 22584727
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||    
T  22584602 ttttttaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatact 22584701  T
Q  182 acctaaatagtt-agggaccaaaaat 206  Q
    |||||| ||||| |||||||||||||    
T  22584702 acctaattagttaagggaccaaaaat 22584727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 11787900 - 11788135
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc---------at-aagaaaatctaacgtttttgaat 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||             || |||||||||||||||||||||||    
T  11787900 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatccaagcaaaaagaggagaagaagatgaagaaaatctaacgtttttgaat 11787999  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| || |||| ||  |||||||||||  |||| |||||||||||||||| |||||||||||||||||||| |||||||| |||||| | ||||||    
T  11788000 taaaactaacagaaa-gagcaaaatgtgtaatggagataagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactgcttaaata 11788098  T
Q  191 gtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
     || |  |||||||||||||||||| |||||| ||||    
T  11788099 attaaaagaccaaaaatgcaatttagccttttttttt 11788135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 46949905 - 46950085
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||| |||||||  | ||||||||         |||||||||||||||||||||| ||    
T  46949905 ttcatcttcatatcatccccatcaaccttcaacaacaaaaatcccaaaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaactaac 46950004  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||  || ||| ||||||||    
T  46950005 ggaaatgaccaaaatgtgtaactgagagaagttaagagaccaaaataaatcgaattttaattaaaggagcaatgtgatact 46950085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 5463344 - 5463145
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttg-aat 90  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||  ||||||| ||||| ||||||||         |||||||||||  |||    
T  5463344 ctcctctttttcatcttcatatcatctccatcggccttcaacaacaagaatttcagaaaactttcaaaagaaaatgaagaaaacctaacgtttttttaat 5463245  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| ||||||| ||| ||||| |||| | ||||||||||||||||||||| |||||||||||||||||||| |||||||| |||| || |||||||    
T  5463244 taaaactgacggaaaggaccaaaatatgtacctgagagaagttaagggaccaaaataaatcgaattttaattaagagaccaaagcgatattatctaaata 5463145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 21036135 - 21035988
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||  ||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |    
T  21036135 aagaaaacctaacgttttttaattaaaactaacttaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaatgg 21036036  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||| |||||||||| ||| | |||||||||||||||    
T  21036035 accaaagtgatactatctaaatagttaaggaatcaaaaatgcaattta 21035988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21385096 - 21385319
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||  ||| | |||||| ||||||||||||||||| ||| |||||| ||||         ||||||||||||||||    
T  21385096 ctcctctttttcatcttcatatcatctgtatcgatcttcaataacaagaatcccagaaatattccataagcaaatgtagaaaacctaacgtttttgaatt 21385195  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||   ||||||||||| ||||||||| ||| ||||||||||||||| |||| |||||  ||||||||||||| |||||||| |||||||| |||||||    
T  21385196 aaaatcaacggaaatgaccaaaatgtgttacatagagaagttaagggatcaaaataaattaaattttaattaagggaccaaagcgatactacttaaatag 21385295  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||  |||| |||||||||    
T  21385296 ttaagggattaaaagtgcaattta 21385319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 29257059 - 29257210
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||| ||||| |||||||||||| | |    
T  29257059 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaatggaccaaaataaattgaattttaattagggg 29257158  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    || ||| | |||||| |||||||||| || |||||||||||||||| |||||    
T  29257159 acaaaattaatactagctaaatagttaagagaccaaaaatgcaattaaacct 29257210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 9119452 - 9119618
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| || ||||| |||||||||||||||||||||||||||| |||||||||  || ||||||||         ||||||||||||||||    
T  9119452 ctcctctttttcatcttaatatcttctccatcaaccttcaacaacaagaatctcagaaaaataccagaagaaaatgaagaaaacctaacgtttttgaatt 9119551  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaatttt 158  Q
    |||||| || |||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9119552 aaaactaactgaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaatttt 9119618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 5463354 - 5463507
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || || | ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||  |    
T  5463354 aagaaaacctaacatttttgaattaaaactaacagagaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaacgg 5463453  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| ||||||| |||||||||| |||||| ||||||||| |||| |||||    
T  5463454 accaaagcgatactagctaaatagttaagggactaaaaatgcattttagccttt 5463507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 45305636 - 45305412
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||| |||||  |||||||| || || |||||         ||||||||||||||||    
T  45305636 ctcctgtttttcatcttcatatcatttccatcaaccttcaacaacaaaaatccaggaaaaattccaaaaaaaaatgaagaaacactaacgtttttgaatt 45305537  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||| | ||||||| ||| |||| || |||||||||||| ||||| |||||||| |||||||||| ||||||||  ||||||||  ||||||||||||||    
T  45305536 aaaagtaacggaaaagaccaaaaggtataacagagagaaagttaaaggaccaaaataaatcgaatcttaattaaaggaccaaagcaatactacctaaata 45305437  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| |  ||||||||||||||||||    
T  45305436 gttaactgaccaaaaatgcaattta 45305412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 6181852 - 6181999
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| || ||||||||||||||||||| |  |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  |    
T  6181852 aagaaaaccttacgtttttgaattaaaactaattgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaagg 6181951  T
Q  168 accaaagtgatactacctaaatagtta-gggaccaaaaatgcaattta 214  Q
    || |||| |||||||| |||||||||| | |||||||||| |||||||    
T  6181952 actaaagcgatactacataaatagttatgagaccaaaaatacaattta 6181999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 13944661 - 13944510
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| | ||||||||| ||||||| |||  ||||||||||||||||||||  |||||| ||||||||||||| |    
T  13944661 aagaaaacctaacatttttgaattaaaactaatggaaatgaccaaaatgtttaatggagagaagttaagggaccaatataaatcaaattttaattaaggg 13944562  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  ||||||| |||||||||| | |||||||||||||||||||||||    
T  13944561 accaaaacgatactagctaaatagttaaaggaccaaaaatgcaatttaacct 13944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 25088252 - 25088402
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||  |||||||||||||||| || |||||||||||||| ||||| |    
T  25088252 aagaaaacttaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacatggagaagttaagggaccgaactaaatcgaattttagttaag-g 25088350  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  |||||||||||||||||| |||||||||||||  ||||||||||    
T  25088351 accaaaacgatactacctaaatagttaagggaccaaaaatataatttaacct 25088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 49291143 - 49291017
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||   ||||||||||||| || ||| |||||| ||||||||||||| |    
T  49291143 aagaaaacctaacgtttttgaattaaaactaacggaaatgacgaaaatgtgtaatgaagagaagttaaggaacaaaaataaatcaaattttaattaaggg 49291044  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    ||||||| |||||||||||||||||||    
T  49291043 accaaagcgatactacctaaatagtta 49291017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 44222339 - 44222191
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||| ||||||||||||||||| || ||||  |  |||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||    
T  44222339 aaaatctaatgtttttgaattaaaactaacagaaagaatcaaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttaattaagggacc 44222240  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    |||| |||| ||| |||||| || | |||||||||||||||||||||||    
T  44222239 aaagcgatattacataaataattaaaggaccaaaaatgcaatttaacct 44222191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 50921370 - 50921486
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||| |    
T  50921370 aaaatgtgtaactgagagaagttaagggaccaaaataaatcgaattttacttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgta 50921469  T
Q  210 atttaaccttttatttt 226  Q
    ||||| |||||| ||||    
T  50921470 atttagccttttttttt 50921486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 19886088 - 19885977
Alignment:
Q  112 aaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaa 210  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||| ||||||||  |||||||| |||||||||||||||||    
T  19886088 aaatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaaggaaccaaagcgatactacaaaaatagttaagggaccaaaaatgcaa 19885989  T
Q  211 tttaacctttta 222  Q
    ||||||||||||    
T  19885988 tttaacctttta 19885977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 42607671 - 42607885
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaattaaaacttac 100  Q
    ||||| || ||||||||| |||||||||| ||||| ||||||| ||||||||||||| ||||         ||||||||| |||||||||||||||| ||    
T  42607671 ttcatctttatatcatcttcatcaacctttaacaaaaagaatctcagaaaaatttcagaagaaaatgaagaaaatctaacctttttgaattaaaactaac 42607770  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||| ||||| |||||||||||| | |||| ||||| || |||||| ||||||||||||| |||||||  ||||||| ||||||| || |||||     
T  42607771 ggaaaggaccaaaatttgtaacagagagtaattaaaggaccgaaataaatcaaattttaattaagagaccaaaacgatactatctaaataattaagggat 42607870  T
Q  200 caaaaatgcaattta 214  Q
    ||||||| |||||||    
T  42607871 caaaaatacaattta 42607885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 5118201 - 5118096
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| || |||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |    
T  5118201 aagaaaacctaatgtttttgaattaaaactaacagaaatgaccaaaatgtataacagagagaagttaagggaccaaaataaatcgaattttaattaaggg 5118102  T
Q  168 accaaa 173  Q
    ||||||    
T  5118101 accaaa 5118096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 28112900 - 28112803
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||| |||||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  28112900 aagaaaacctaacgtttttgaattaaaactaacggaaatgatcaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaag 28112803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 221
Target Start/End: Complemental strand, 14775933 - 14775741
Alignment:
Q  39 caacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagaga 129  Q
    ||||||||||||||||||||||| |||| ||||||||         |||||||||||||||||||||| ||| ||| ||| ||||||||||||||||| |    
T  14775933 caacaacaagaatcccagaaaaaattcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacgaaaaggaccaaaatgtgtaacagagata 14775834  T
Q  130 agttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||||||||| |||| |||||||||||||||||||   | ||||   |||||||||||||| || ||||| ||||||| ||||||| ||||||    
T  14775833 agttaagggagcaaaataaatcgaattttaattaaagaagcaaaacaatactacctaaataattaagggaacaaaaatacaatttagcctttt 14775741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 21036146 - 21036369
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||| |||||||||||||||||||| ||||||||   |||||||||||||||| || ||||| ||         |||| ||| ||||||||    
T  21036146 tcctctttttcatcttcatatcatctccatcaactttcaacaa---gaatcccagaaaaattccagaagaacataaagaaaccctaaagttcttgaatta 21036242  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||||||  |||   ||||||||||| |||||||| ||||||| |||||| ||||||||||||   |||||||||||  ||||||||||||    
T  21036243 aaactaacggaaatgatcaaacaatgtaacagagaaaagttaagagaccaaaataaatcaaattttaattaaagaaccaaagtgatggtacctaaatagt 21036342  T
Q  193 tagggaccaaaaatgcaatttaacctt 219  Q
    ||  ||  |||||||||||||| ||||    
T  21036343 taaagataaaaaatgcaatttagcctt 21036369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 2125431 - 2125293
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaa 104  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| |||||||||||||| |||    |    
T  2125431 tctttttcatcttcatatcatctccatcaaccttcaacaataagaatctcagaaaaatttcagaagaaaacctaacatttttgaattaaaa-ttaatata 2125333  T
Q  105 atgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    | ||  |||||||||||| |||||||||||||| ||||||    
T  2125332 aagatcaaaatgtgtaacggagagaagttaaggaaccaaa 2125293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 31126149 - 31125939
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaact 97  Q
    |||||||| |||||||||||||| |||| ||| ||||||||||||||||||||| || || ||||||||         ||||| ||||| |||||||| |    
T  31126149 tttttcatcttcatatcatctccgtcaatcttaaacaacaagaatcccagaaaacttacagaagaaaatgaagaaaatctaacattttttaattaaaatt 31126050  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
     ||||||||||  |||||||||||  |||||||||||||| | |||| ||||||||||||||||||       |||| |||||||||||||||||| |||    
T  31126049 aacggaaatgatcaaaatgtgtaatggagagaagttaaggaatcaaaataaatcgaattttaatta-------aaagcgatactacctaaatagttaagg 31125957  T
Q  197 gaccaaaaatgcaattta 214  Q
    || |||||||||||||||    
T  31125956 gatcaaaaatgcaattta 31125939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 79 - 194
Target Start/End: Complemental strand, 46949895 - 46949780
Alignment:
Q  79 acgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgat 178  Q
    ||||||||||||||||||| ||||||| ||  ||||||||||||  | |||||||||||||||||| |||||||||||||||||||| |||||||  |||    
T  46949895 acgtttttgaattaaaactaacggaaaggatcaaaatgtgtaacgaatagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgat 46949796  T
Q  179 actacctaaatagtta 194  Q
    ||||||||||||||||    
T  46949795 actacctaaatagtta 46949780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 1831810 - 1831667
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||    ||||||| ||||||| ||| |||||||||||   |||||||||||||||||||| |||||||||||||||||||  |    
T  1831810 aagaaaacctaacgttttt----taaaactaacggaaaggaccaaaatgtgtaaagaagagaagttaagggaccaaaataaatcgaattttaattaaaag 1831715  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| || |||| ||||| |||||||    
T  1831714 accaaagtgatactacctaaatagttaagagaccgaaaattcaattta 1831667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 13831258 - 13831360
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |    
T  13831258 aagaaaacctaacatttttgaattaaaactaacagaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaggg 13831357  T
Q  168 acc 170  Q
    |||    
T  13831358 acc 13831360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 34621871 - 34622025
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||| ||||||||||||||||||||| || |||||||| |||||||||||| || ||||||||||  |||||| |||||| ||||||||||||| |    
T  34621871 aagaaaatttaacgtttttgaattaaaactaactgaaatgaccaaaatgtgtaacggaaagaagttaagataccaaaataaatcaaattttaattaaggg 34621970  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    | ||||  |||||||  ||||||||| ||||||||||||   |||||||||||||    
T  34621971 atcaaaacgatactaattaaatagttaagggaccaaaaacataatttaacctttt 34622025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 195
Target Start/End: Complemental strand, 32517735 - 32517628
Alignment:
Q  88 aattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaa 187  Q
    |||||||||| ||  |||| || ||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32517735 aattaaaactaacaaaaataaccaaaatgtgtaacagagagaagttaaggaatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaa 32517636  T
Q  188 atagttag 195  Q
    ||||||||    
T  32517635 atagttag 32517628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 51810374 - 51810513
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||| |||||||||||||||| ||   || ||| |||||||||||||||||||| ||||||||||||| |||||| | |||||||| ||      
T  51810374 aagaaaatctaacatttttgaattaaaactaacaagaaggaccaaaatgtgtaacagagagaaattaagggaccaaaataaatcaatttttaattcagga 51810473  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    || |||| |||||||||||||||||| |||||||||||||    
T  51810474 acaaaagcgatactacctaaatagttaagggaccaaaaat 51810513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 21385086 - 21384961
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||  ||||||||||||  ||||||| |||||||||||||||||||| |    
T  21385086 aagaaaatctatcgtttttgaattaaaactaacggaaatgaccaaaatatgtaatggagagaagttaa-agaccaaaataaatcgaattttaattaaggg 21384988  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    |  |||| |||||||| ||||||||||    
T  21384987 ataaaagcgatactacataaatagtta 21384961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 36077378 - 36077274
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    ||||| ||||||  |||||| ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  36077378 aaaatttgtaacgaagagaacttaagggaccaaaataaattgaattttaattaagggaccaaagtgatactacctaaataattaagggaccaaaaatgca 36077279  T
Q  210 attta 214  Q
    |||||    
T  36077278 attta 36077274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 40703091 - 40702880
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||| || |||||||          ||||| ||||||||||    
T  40703091 ctcctcttcttcatcttcatatcatctccgtcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaaggaagaaaacctaacatttttgaatt 40702992  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||| ||  ||||||||||||  ||||||||||||  |||||| |||||| |||||||||| || ||||   |||||||||  |||||||    
T  40702991 aaaactaacgaaaaagatcaaaatgtgtaactcagagaagttaagataccaaaataaatcaaattttaatttagggacc---gtgatactaattaaatag 40702895  T
Q  192 tt-agggaccaaaaa 205  Q
    || ||||||||||||    
T  40702894 ttaagggaccaaaaa 40702880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 9119442 - 9119291
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||| ||||| |||||||| |  ||||||| |||   | ||||||||||||| |||| |||||| ||||||||||||| |    
T  9119442 aagaaaatctaacgtttttgaattgaaactaacggaaataaacaaaatgtataatgtatagaagttaagggatcaaaataaatcaaattttaattaaggg 9119343  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| |||||||||||| ||||| |||||  ||||||  ||||||||||    
T  9119342 accaaagcgatactacctaagtagttaagggataaaaaatataatttaacct 9119291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 221
Target Start/End: Complemental strand, 36884841 - 36884718
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    ||||||| ||| ||||| |||||  ||| ||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| | ||    
T  36884841 acggaaaggaccaaaatatgtaatggagggaagttaagagaccaaaataaatcgaattttaattaagagaccaaagcgatactacctaaatagttaaagg 36884742  T
Q  198 accaaaaatgcaatttaacctttt 221  Q
    | ||||||| ||||||||||||||    
T  36884741 aacaaaaatacaatttaacctttt 36884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 48702051 - 48702263
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||| | |||||| || ||    ||||||||| ||||||||||||||||  ||    
T  48702051 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaattcaagaaaa-ttccaatttaaaatctaatgtttttgaattaaaaccaac 48702149  T
Q  101 ggaaatgactaaaatgtgtaac-agagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggga 198  Q
     |||||||| |||||||||||| | ||| |||||||   |||||| |||||| ||||||||||||  |||||||  ||||||| | ||||| || |||||    
T  48702150 -gaaatgaccaaaatgtgtaacgataga-aagttaaaataccaaaataaatccaattttaattaaaggaccaaaacgatactaacaaaataattaaggga 48702247  T
Q  199 ccaaaaatgcaattta 214  Q
    | ||||||||||||||    
T  48702248 ctaaaaatgcaattta 48702263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 36657651 - 36657503
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagaga--agttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||| ||||||  |||||||||| |||| |||||| |||||||||||||    
T  36657651 aagaaaacctaacgtttttgaattaaaactaacggaaaggac-aaaatatgtaacggagagaggagttaagggatcaaaataaatcaaattttaattaag 36657553  T
Q  166 cgaccaaagtgatactacctaaatagtta-gggaccaaaaatgcaattta 214  Q
     |||| ||| ||| | | ||||||||||| ||||| ||||||||||||||    
T  36657552 ggacccaagagatgcaaactaaatagttaggggacgaaaaatgcaattta 36657503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 4550836 - 4550983
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||||| || || ||||||| ||| |||||||||||  ||||||| ||||||  |||||| |||||| |||||||||||||     
T  4550836 aagaaaacctaacgtttttgaatttaacctaacggaaaggaccaaaatgtgtaag-gagagaaagttaagataccaaaataaatcaaattttaattaagg 4550934  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||| |||||||  ||||||||| || ||||||||||||||||||    
T  4550935 gaccaaagcgatactaattaaatagttaagagaccaaaaatgcaattta 4550983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 40534075 - 40533927
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||  |||| ||||||||  | | || |||||| ||||||||||||| |    
T  40534075 aagaaaacctaacgtttttaaattaaaactaacggaaatgaccaaaatgtgtaatggagaaaagttaagatagcgaaataaatcaaattttaattaaggg 40533976  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaa 215  Q
    | ||||| |||||||  ||||||||| || ||| |||||||||||||||    
T  40533975 atcaaagcgatactaattaaatagttaagagactaaaaatgcaatttaa 40533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 40703101 - 40703247
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||||||||||||||| |||||||||| ||| ||| ||| |||||||||||  ||||| ||||||||   ||||| |||||| |||||||| ||||     
T  40703101 aagaaaatctaacgtttttaaattaaaactaacgaaaaggaccaaaatgtgtaaggagaga-aagttaagatgccaaaataaatcaaattttaactaagg 40703199  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    |||||||| |||||||  ||||||||| ||||||||||||||||||||    
T  40703200 gaccaaagcgatactaattaaatagttaagggaccaaaaatgcaattt 40703247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19986348 - 19986274
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||    
T  19986348 ctcctctttttcatcttcatatcatctgcatcaaccttcaacaacaagaatcccagaaaaattccaaaagaaaat 19986274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 30792684 - 30792759
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatc 151  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||||||| ||||||    
T  30792684 ctaacgtttttgaattaaaactaacggaaatgaccaaaatatgtaacggagagaagttaagggaccaaaataaatc 30792759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 19886123 - 19886226
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  |||||||||| |||||||||| ||||||||||| ||||||||| |  |||||||||||| |||||||| |||||||||||||||||||  |    
T  19886123 aagaaaacataacgtttttaaattaaaactaacggaaatgacaaaaatgtgtga--gagagaagttaaaggaccaaaataaatcgaattttaattaaagg 19886220  T
Q  168 accaaa 173  Q
    ||||||    
T  19886221 accaaa 19886226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 40534085 - 40534287
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaatt 91  Q
    |||||||| || || |||||||||||||||||||||||||||||||| ||||| ||||||||| ||          |||||||  |||| ||||| ||||    
T  40534085 ctcctcttctttatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccagaagaacatgaagaaaacttaacattttttaatt 40534184  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| |   |||||||||||  |||| ||||||||  ||| || |||||| ||||||||||||| |||||||| |||||||  |||||||    
T  40534185 aaaactaacagaaagggtcaaaatgtgtaatggagaaaagttaagataccgaaataaatcaaattttaattaagagaccaaagcgatactaattaaatag 40534284  T
Q  192 tta 194  Q
    |||    
T  40534285 tta 40534287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 31126165 - 31126261
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaa 164  Q
    ||||||| |||||||||||||||||||||| ||| |||  |||||||||||| ||| ||| |||||||||||| ||| |||||| ||||||||||||    
T  31126165 aagaaaaactaacgtttttgaattaaaactaacgaaaagaactaaaatgtgtgacatagaaaagttaagggactaaaataaatcaaattttaattaa 31126261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 3569519 - 3569388
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||| || |||||  |||||| || ||| |||||||||||||  ||||||     
T  3569519 ctaacgtttttgaattaaaactaacggaaattaccaaaatgtgtaacagagagaaaattaagataccaaaatatatcaaattttaattaaggaaccaaaa 3569420  T
Q  175 tgatactacctaaatagtt-agggaccaaaaa 205  Q
     |||||||  |||||| || ||||||||||||    
T  3569419 cgatactaattaaataattaagggaccaaaaa 3569388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 5118079 - 5117996
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||| |||||||||||||||||||  |||||||| |||| ||||||||||||| ||||||||||||| |||||||    
T  5118079 ttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatattacctaaatagttaagggaccaaaaatacaattta 5117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 2125448 - 2125590
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| ||||||||||| |||||||||| || |||| ||| ||||||| ||||  |||||||||||||||||||| |||||| |||||      || ||||    
T  2125448 aaaacctaacgttttttaattaaaactaacagaaaggaccaaaatgt-taacgaagagaagttaagggaccaaaataaatcaaattt------agggacc 2125540  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||| ||||||||||||||| || |||||||||||||| ||||| |||||    
T  2125541 aaagcgatactacctaaataattaagggaccaaaaatgtaatttgacctt 2125590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 4054688 - 4054602
Alignment:
Q  79 acgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaa 164  Q
    ||||||||||||||||||| ||| ||| |||||||||||||||| ||||| |||| ||| ||||||| |||||||||||||||||||    
T  4054688 acgtttttgaattaaaactaacgtaaaagactaaaatgtgtaacggagagaaagtaaagagaccaaaataaatcgaattttaattaa 4054602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 19886214 - 19886300
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    |||| |||||||| |||||||||||||||||||  |||||||||||||||||||||||| || | ||||||||||| ||||||||||    
T  19886214 ttaaaggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaataattaaaggaccaaaaatacaatttaacc 19886300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 75
Target Start/End: Original strand, 28112899 - 28112964
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  28112899 ttcatcttcatatcatatccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaat 28112964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 11797232 - 11797149
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||| ||||| |||||||||||||| ||| |||| ||||||||||||||| || | |||||||||||||||||||    
T  11797232 ttaagggaccaaaataaattgaattttaattaagggacaaaagcgatactacctaaataattaaaggaccaaaaatgcaattta 11797149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 214
Target Start/End: Complemental strand, 28112807 - 28112724
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||| |||| ||||| ||||||||||||||  |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  28112807 ttaagggatcaaaataaattgaattttaattaaggaaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 28112724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 19269455 - 19269357
Alignment:
Q  123 agagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||| ||||| | |||||||| |||| |||||||||| |||| |||||||||||||||   ||||||||| ||||||||||||||||||||| |||||    
T  19269455 agagaaaagttcaaggaccaaaataaaccgaattttaactaagagaccaaagtgatactggataaatagttaagggaccaaaaatgcaatttagccttt 19269357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13831248 - 13831193
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccag 56  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  13831248 ctcctctttttcatcttcatatcatcttcatcaatcttcaacaacaagaatcccag 13831193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 20260535 - 20260452
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    |||||||||||| ||||||||||||   |||||| |||||| ||||||||||||| ||||||| ||||||||  ||||||||||    
T  20260535 aaaatgtgtaacggagagaagttaaaataccaaaataaatcaaattttaattaagggaccaaaatgatactaattaaatagtta 20260452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 27209393 - 27209538
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||||||||| |||||||| | ||||||| ||| |||||||| ||  ||||| ||||||||  |||||| |||||| ||||||||||||  |||||||     
T  27209393 ctaacgttttttaattaaaattaacggaaaggaccaaaatgtgcaaggagaga-aagttaagataccaaaataaatcaaattttaattaaaggaccaaaa 27209491  T
Q  175 tgatactacctaaatagt-tagggaccaaaaatgcaatttaaccttt 220  Q
     |||||||  ||||| ||  ||||||||||||||||||||| |||||    
T  27209492 cgatactaattaaattgtcaagggaccaaaaatgcaatttagccttt 27209538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 12987779 - 12987718
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  12987779 tcctcttcttcatcttcatatcatatccatcaaccttcaacaacaaaaattccagaaaaatt 12987718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 4550826 - 4550722
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaatt 91  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||  |         |||||||||||||||||||||||||    
T  4550826 ctcctcttcttcatcttcatatcatctccatcaacctttaacaacaaaaatctgagaaaaattctagaagaacattaagaaaatctaacgtttttgaatt 4550727  T
Q  92 aaaac 96  Q
    |||||    
T  4550726 aaaac 4550722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 20260615 - 20260762
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagaga-agttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||  |||||||||| |||||||||| ||  ||||||| ||||| |||||  |||||| |||||||  |||||| ||||||  ||||||||||||     
T  20260615 aagaaaacataacgtttttaaattaaaactaacaaaaatgaccaaaatatgtaag-gagagagagttaagataccaaaataaatcagattttaattaagg 20260713  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||  |||||||  |||||| || |||||| ||||||||||||||    
T  20260714 gaccaaaacgatactaattaaataattaagggactaaaaatgcaattta 20260762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 34621771 - 34621616
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||||||||||| |  |||| ||| |||||||||||  |||| || ||||||  |  ||| |||||  |||||||||||||     
T  34621771 aagaaaacctaacgtttttgaattaaaactaatcgaaaggaccaaaatgtgtaag-gagaaaaagttaagatattaaaataaataaaattttaattaaga 34621673  T
Q  167 gaccaaagtgatactacctaaatagttag-ggaccaaaaatgcaatttaacctttta 222  Q
    |||||||  |||||||  |||||| |||  ||| |||||||||||||||||||||||    
T  34621672 gaccaaaacgatactaattaaataattaaaggatcaaaaatgcaatttaacctttta 34621616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 11394763 - 11394697
Alignment:
Q  147 aaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggaccaaaaatgcaattt 213  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||| |   ||||||||||||||    
T  11394763 aaatcgaattttaattaagggaccaaagcgatattacctaaatagttaagagacaaaaatgcaattt 11394697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20260605 - 20260543
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||| ||||| |||| ||||| |||||| |||||||||||||| ||||| |||||||||    
T  20260605 ctcctcttcttcatcttcacatcatatccatcgaccttcaacaacaaaaatccaagaaaaatt 20260543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35986392 - 35986466
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||||||| |||||||||| || |||||||||||||  ||||||| | | ||||||| || ||||||||    
T  35986392 ctcctctttttcatcttcatatcatttctatcaaccttcaaccgcaagaatgctaaaaaaattccaaaagaaaat 35986466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #128
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 38961219 - 38961149
Alignment:
Q  75 tctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaa 144  Q
    |||||||||||| |||||||  | ||||||||||| ||||||| |||| ||||| ||||||||||||||||    
T  38961219 tctaacgttttttaattaaatttaacggaaatgaccaaaatgtataacggagagaaagttaagggaccaaa 38961149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #129
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 5118108 - 5118067
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||||||||||| |||||||||||||||||||| |||||||    
T  5118108 ttaagggaccaaaataaatcgaattttaattaagggaccaaa 5118067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 109)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 39454668 - 39454454
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||| | || ||||||| |||||||||||||||||||||| ||    
T  39454668 ctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcgcagaaaaaatccagaagaaaacctaacgtttttgaattaaaactaac 39454569  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| |||||||||||| |||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  39454568 ggaaatgaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagtgatactacttaaatagttaagggac 39454469  T
Q  200 caaaaatgcaattta 214  Q
    |||||||||||||||    
T  39454468 caaaaatgcaattta 39454454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 18565279 - 18565069
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacg 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||| || |||||||||||||||||||||||||||||| |||    
T  18565279 tcctctttttcatcttcatatcatctccatcaaccttcaacaa---gaatcccagaaaaattccagaagaaaatctaacgtttttgaattaaaactaacg 18565183  T
Q  102 gaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggacc 200  Q
    |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||| ||||||||||| || ||||    
T  18565182 gaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggactaaagcgatactgcctaaatagttaagagacc 18565083  T
Q  201 aaaaatgcaattta 214  Q
    ||||||||||||||    
T  18565082 aaaaatgcaattta 18565069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 31450892 - 31450657
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||         ||||||||||||||||    
T  31450892 ctccacttttccattttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaaatccagaagaaaatgaagaaaacctaacgtttttgaatt 31450793  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||    
T  31450792 aaaactaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaatag 31450693  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    || ||||||||||||||||||||| |||||| ||||    
T  31450692 ttaagggaccaaaaatgcaatttagccttttttttt 31450657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 32503706 - 32503925
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||  | |||||||||||||||||| ||||||||||| ||    
T  32503706 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatcctagaaaaattcgagaagaaaatctaacgttttcgaattaaaactaac 32503805  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| |||||||||||| || |||||||||||||||||| |||||| ||||||||||||  |||||||   ||||||||||||||||| | ||||    
T  32503806 ggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaaaggaccaaatcaatactacctaaatagttaaaggac 32503905  T
Q  200 caaaaatgcaatttaacctt 219  Q
     || ||||||||||||||||    
T  32503906 taagaatgcaatttaacctt 32503925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 44612643 - 44612872
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  44612643 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 44612742  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatac--tacctaaat 189  Q
    |||||| ||||||| ||| ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||| |||||  ||| |||||    
T  44612743 aaaactaacggaaaggaccaaaatgtgtaacatagagaagttaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactatacgtaaat 44612842  T
Q  190 agttagggaccaaaaatgcaatttaacctt 219  Q
    ||||| |||||||| |||||||||| ||||    
T  44612843 agttaaggaccaaacatgcaatttagcctt 44612872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 41377573 - 41377353
Alignment:
Q  8 ttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaactt 98  Q
    ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||  | ||||||||         ||||||||||||||||||||||     
T  41377573 ttttcatcttcatatcatctccatcaatcttcaacaacaataatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaacta 41377474  T
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttaggga 198  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||    
T  41377473 acggaaaggaccaaaatctgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagga 41377374  T
Q  199 ccaaaaatgcaatttaacctt 219  Q
    |||||||| ||||||| ||||    
T  41377373 ccaaaaatacaatttagcctt 41377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 32933751 - 32933974
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||         ||||||||||| ||||    
T  32933751 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaacaaaacctaacgttttttaatt 32933850  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||||| |||| |||||||||||    
T  32933851 aaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttatttaaaggaccaaagcgatattacctaaatag 32933950  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  32933951 ttaagggaccaaaaatgcaattta 32933974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4104319 - 4104542
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||         ||||||||||||||||||||    
T  4104319 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaattccaaaagaaaatgaagaaaatctaacgtttttgaatt 4104418  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| |||  |||||| |||| |||||||||||||| |||||| |||||||||||||||||||| || ||||| ||||||||||||||||    
T  4104419 aaaactaacggaaaggacccaaatgtataacggagagaagttaaggaaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatag 4104518  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||||| |||||||    
T  4104519 ttaagggaccaaaaatacaattta 4104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 12304011 - 12303788
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||| ||||||| ||||||| ||||||||||| || ||||||||         |||| ||||||||| |    
T  12304011 ctcctctttttcatcttcatatcatctccatcaactttcaacagcaagaattccagaaaaattccagaagaaaatgaagaaaacctaatgtttttgaaat 12303912  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  12303911 aaaactaacggaaaggaccaaaatgtgtaacagagatgagttaagggaccaaaataaatcgaattttaattaagtgaccaaagcgatactacctaaatag 12303812  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  12303811 ttaagggaccaaaaatgcaattta 12303788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 21470521 - 21470298
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||         |||| |||||||||||    
T  21470521 ctcctcattttcatctccatatcatctccatcaaccatcaacaacaagaatcccagaaaaattccaaaagaaaatgaagaaaacctaatgtttttgaatt 21470422  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||    
T  21470421 aaaactaacagaaaggaccaaaatgtgtaacagagagaagttgagggaccaaaataaatcgaattttaattaagggaccaaagtgatactgcctaaatag 21470322  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || | |||||||||||||||||||    
T  21470321 ttaaaggaccaaaaatgcaattta 21470298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 25642428 - 25642651
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||| |||| |||||||||||||||| |||||||||||||||||| || ||||||||         ||||||||||||||||    
T  25642428 ctcctctttttcatcttcatattatcttcatcaaccttcaacaagaagaatcccagaaaaattccacaagaaaatgaagaaaacctaacgtttttgaatt 25642527  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  25642528 aaaactaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatag 25642627  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||| ||||||| |||||||    
T  25642628 ttaagggaacaaaaatacaattta 25642651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 34820505 - 34820270
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaatt 91  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||| || ||||||||          |||||||||||||||    
T  34820505 ctcctctttttcatcttcatatcacctccatcaaccttcaacaataagaatcccataaaaattccaaaagaaaatgaagaaaacttaacgtttttgaatt 34820406  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||  ||||||| |||||||| |||||||    
T  34820405 aaaactaacgaaaatgaccaaaatgtgtaacagagagaagttaaaggaccaaaataaatctaattttaattaaggaaccaaagcgatactacttaaatag 34820306  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    || |||||||||||||||||||| ||||||| ||||    
T  34820305 ttaagggaccaaaaatgcaatttgaccttttttttt 34820270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 35408704 - 35408883
Alignment:
Q  15 tttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaa 114  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  35408704 tttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaatttcagaagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaa 35408803  T
Q  115 tgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    ||||||||||||||||||||||  |||||| |||||| |||||||||||||  ||||||| |||||||  ||||||||||    
T  35408804 tgtgtaacagagagaagttaagataccaaaataaatcaaattttaattaaggaaccaaagcgatactaattaaatagtta 35408883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 4120923 - 4121149
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||         || |||||||||| ||    
T  4120923 ctcctctttttcatattcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccaaaagaaaatgaagaaaacctgacgtttttgactt 4121022  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||||||  ||| ||||||| |||||||||||||||||||||| |||||||||||||||||||  |||||||  ||||||||||||||||    
T  4121023 aaaactaacgaaaatgaacaaagtgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaaacgatactacctaaatag 4121122  T
Q  192 tt-agggaccaaaaatgcaatttaacc 217  Q
    || ||||||||||||||||||||||||    
T  4121123 ttaagggaccaaaaatgcaatttaacc 4121149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 27883628 - 27883815
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  | |  ||||||||||||||||||||||||||||| ||    
T  27883628 ctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaagaaaatga--agaaaatctaacgtttttgaattaaaactaac 27883725  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||||| |||||||||||| |||||||||||||  |||||| |||||| ||||||||||||| |||||||| |||||||||||||||    
T  27883726 ggaaatgaccaaaatgtgtaacggagagaagttaagtcaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaata 27883815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 28631500 - 28631278
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||         ||||||||||||||||    
T  28631500 ctcctctttttcatcttcagatcatctccatcaaccttcaacaacaagaatcctagaaaaaattcagaagaaaatgaagaaaacctaacgtttttgaatt 28631401  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||||  |||||||||| |||||||||||  ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||| ||||||||||||    
T  28631400 aaaactatcggaaatgaccaaaatgtgtaaaggagagaagttaagggactaaaataaatcgaattttaattaagggaccaaagcgatgctacctaaatag 28631301  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || |||||||||||||| |||||    
T  28631300 ttaagggaccaaaaatgtaattt 28631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 7 - 214
Target Start/End: Complemental strand, 17856408 - 17856202
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||  | |  |||||| |||||||||||||||||||||| |||||||     
T  17856408 tttttcattttcatatcatctccatcaaccttcaacaacaaaaatctcagaagaaaatga--agaaaacctaacgtttttgaattaaaactaacggaaaa 17856311  T
Q  107 gactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaa 205  Q
    ||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| || ||||||| ||||    
T  17856310 gaccaaaatgtgtaacaaggagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaataattaagggaccgaaaa 17856211  T
Q  206 tgcaattta 214  Q
    || ||||||    
T  17856210 tgaaattta 17856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 13354337 - 13354560
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||         ||||||||||||||||    
T  13354337 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaatt 13354436  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| || |||||||||  |||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||    
T  13354437 aaaactaacagaaaggaccaatatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatag 13354536  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||| | |||||||    
T  13354537 ttaagggaccaaaattacaattta 13354560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 43183809 - 43183586
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |        || |||||||| |||||||||||||||    
T  43183809 ctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccagaaaaattcctgaagaaaatgaagaaaatataacgtttttgaatt 43183710  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| ||||||||||||||||||| |||| ||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  43183709 aaaactaacagaaaggaccaaaatgtgtaacagagagatgttatgggaccaaaataaatctaattttaattaagggaccaaagcgatactacctaaatag 43183610  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||| ||||||| ||||||    
T  43183609 ttaagggactaaaaatgtaattta 43183586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 27132736 - 27132510
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcata--------agaaaatctaacgtttttgaatta 92  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  | |        |||||| |||| ||||||||||||    
T  27132736 ctcctctatttcatcttcatatcatctccatcaaccttcaacaacaagaatcgcagaaaaattctagagaaaatgaagaaaacctaatgtttttgaatta 27132637  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    |||||  |||||| ||| ||||||||||||  |||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||    
T  27132636 aaactatcggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagt 27132537  T
Q  193 t-agggaccaaaaatgcaatttaacct 218  Q
    | ||||||||||||| |||||||||||    
T  27132536 taagggaccaaaaatacaatttaacct 27132510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 34127791 - 34127570
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat--------ctaacgtttttgaatta 92  Q
    |||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||        |||||||||||||||||    
T  34127791 ctcctctttttcatcttaatatcaactccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaactaacgtttttgaatta 34127692  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||||||  |||||||||||  || |||||||||| ||| ||| ||||| |||||||||||||| |||||||  ||||||| |||||||||    
T  34127691 aaactaacggaaatgatcaaaatgtgtaatggatagaagttaagcgacaaaaataaattgaattttaattaagggaccaaaacgatactatctaaatagt 34127592  T
Q  193 t-agggaccaaaaatgcaattt 213  Q
    | ||||||||||||||||||||    
T  34127591 taagggaccaaaaatgcaattt 34127570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 20908736 - 20908502
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||||         |||||||||||||||||    
T  20908736 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaagtttcaaaagaaaatgaagaaaacctaacgtttttgaatta 20908637  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||| ||| |||||||||||| |  ||||||||||| || ||| |||||||||||||| ||||  |||||||| ||||||||||||||| |    
T  20908636 aaactaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaactaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaataat 20908537  T
Q  193 t-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    | ||||||||||||| ||||||| |||||| ||||    
T  20908536 taagggaccaaaaatacaatttagccttttttttt 20908502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28203086 - 28202863
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||         |||||||| |||||||    
T  28203086 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaattccagaagaagatgaagaaaacctaacgttattgaatt 28202987  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| |||  || |||||||||||| || ||||||||| |||||||  |||||||||||||||||||| |||||||| |||| |||||||||||    
T  28202986 aaaactaacgaaaagaaccaaaatgtgtaacggatagaagttaaaggaccaatataaatcgaattttaattaagggaccaaagcgatattacctaaatag 28202887  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  28202886 ttaagggaccaaaaatgcaattta 28202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 16655832 - 16655610
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||  | |||||||||||||||||| |||||||||| |||||||  | ||||||||         ||||||||||||||||    
T  16655832 ctcctctttttcatcttcatattgtttccatcaaccttcaacaataagaatcccataaaaattcaagaagaaaatgaagaaaacctaacgtttttgaatt 16655733  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||  ||||||| |||||||||||||||||    
T  16655732 aaaactaacggaaaggaccaaaatgtgcaacagagagaagttaaaggaccaaaataaatcgaattttaattaaaggaccaaaatgatactacctaaatag 16655633  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || ||||||||||||| ||||||    
T  16655632 ttaagggaccaaaaatacaattt 16655610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 219
Target Start/End: Original strand, 40694344 - 40694558
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||||         |||||||||||||||||||||| ||    
T  40694344 ttcatcttcatattatctccaccaaccttcaacaacaagaatcccagaaaaaattcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaac 40694443  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggacc 200  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||| |||||| ||||||||||||  |||||||| ||||||||||||||| ||    | |    
T  40694444 ggaaatgaccaaaatgtgtaacggagagaaattaagggaccaaaataaatctaattttaattaaaggaccaaagcgatactacctaaataatt----aac 40694539  T
Q  201 aaaaatgcaatttaacctt 219  Q
    |||||||||||||||||||    
T  40694540 aaaaatgcaatttaacctt 40694558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 28203096 - 28203248
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |    
T  28203096 aagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaacagagagaagttaaaggaccaaaataaatcgaattttaattaaggg 28203195  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||    
T  28203196 accaaagcgatacgacctaaatagttaagggaccaaaaatgcaatttagcctt 28203248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36211510 - 36211682
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||| ||||| ||||||||||||| || ||    
T  36211510 ctcctttttttcatcttcatatcatctccatcaaccttcaacaacatgaatccaagaaaaattccagaagaaaacctaacatttttgaattaaagctaac 36211609  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||||    
T  36211610 ggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaagggaccaaa 36211682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 27476527 - 27476750
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||| |||||| |||||||||||| ||| | |||||||| || ||||         |||||||||||| |||| ||    
T  27476527 ctcctctttttcatcttcatatcatctctatcaactttcaacaacaagtatctctgaaaaattccagaagaaaatgaagaaaatctaacgttcttgattt 27476626  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||||||    
T  27476627 aaaactaacggaaaggaccataatatgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatag 27476726  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||||||||||    
T  27476727 ttaagagaccaaaaatgcaattta 27476750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 70 - 220
Target Start/End: Original strand, 28631512 - 28631663
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||     
T  28631512 gaaaacctaacgtttttgaattaaaactaacggaaatgacgaaaatgtgtaacagagagaagttaagggactaaaataaatcgaattttaattaagagag 28631611  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||| ||||||||| |||||||| ||||||||||||| |||||||||||||    
T  28631612 caaagcgatactacccaaatagttaagggaccaaaaatacaatttaaccttt 28631663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 41377590 - 41377737
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||| |||||| ||||||||||| | |    
T  41377590 aagaaaacctaacgtttttgaattaaaactaacgaaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattacggg 41377689  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  41377690 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 41377737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 43183819 - 43183970
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||||||||||| || ||||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  43183819 aagaaaacctaacgtttttgaattaaatctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 43183918  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  43183919 accaaagcgatactacctaaataattaagggaccaaaaatgcaatttaacct 43183970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 39150004 - 39150208
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||||||||||          |||||||||||||||||| || ||||||| |||||||||||||||||||| | ||    
T  39150004 ctcctctttttcatcttcatatcatctccatcaac----------aagaatcccagaaaaattccagaagaaaacctaacgtttttgaattaaaattaac 39150093  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
     | || |||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||||  || |||| |||||||||||||||||| | ||||    
T  39150094 aggaaggactaaaatgtgtaacggaaagaagttaagagaccaaaataaatcgaattttaattaaggtacaaaagcgatactacctaaatagttaaaggac 39150193  T
Q  200 caaaaatgcaattta 214  Q
    |||||||||||||||    
T  39150194 caaaaatgcaattta 39150208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 14877703 - 14877486
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatcta------acgtttttgaattaaa 94  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||     |||||||||| ||||||||  |      ||||||||||||||||    
T  14877703 ctcctctttttcatcttcatatcatctccat-aaccttcaacaacaagaattttgaaaaaatttcagaagaaaattaagaaaacacgtttttgaattaaa 14877605  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag-tt 193  Q
    ||| |||||||| || |||||||||||  ||||||||||||||||||||| |||||||||||||||||||  |||||||  |||||||||||||||| ||    
T  14877604 actaacggaaattaccaaaatgtgtaa--gagagaagttaagggaccaaaataaatcgaattttaattaatggaccaaatcgatactacctaaatagttt 14877507  T
Q  194 agggaccaaaaatgcaattta 214  Q
     ||||||||||||||||||||    
T  14877506 tgggaccaaaaatgcaattta 14877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 38275691 - 38275840
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagaga--agttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||| ||||||||| ||||||||||||||||||||    
T  38275691 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagagttacgggaccaaaataaatcgaattttaattaag 38275790  T
Q  166 cgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     || |||||||||||||||||||||||| |||||| ||||||||||||||    
T  38275791 ggatcaaagtgatactacctaaatagttaagggacaaaaaatgcaattta 38275840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16736261 - 16736481
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||| |||||||||| |||||   |||||||||||||||| || ||||||||         ||||||||| ||||||    
T  16736261 ctcctctttttcatcttcatatcatcttcatcaacctttaacaa---gaatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttctgaatt 16736357  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| | || ||||| ||||||| ||    
T  16736358 aaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccgaaataaatcgaattttaattaagggactacagcgatacaacctaaacag 16736457  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||| |||||||||    
T  16736458 ttaagggaccaaaagtgcaattta 16736481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 36 - 219
Target Start/End: Original strand, 37744583 - 37744776
Alignment:
Q  36 cttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagag 126  Q
    |||||||||||| |||| ||||||||||||| ||||||||         |||||||||||||||||||||| ||||||||||| ||||| | ||| ||||    
T  37744583 cttcaacaacaataatcacagaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatctataagagag 37744682  T
Q  127 agaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||| ||| | ||||||||||||||||||||    
T  37744683 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactatctaaatagttaaggaatcaaaaatgcaatttaacctt 37744776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 16350240 - 16350412
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||||  |||||||||||| ||||||| ||||||||||| |||||||||| ||    
T  16350240 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatctaagaaaaatttcagaagaaaacctaacgttttttaattaaaactaac 16350339  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
       ||||||||||||||| |||||||||||||||||  |||||| |||||| ||||||| ||||| |||||||    
T  16350340 atgaatgactaaaatgtgcaacagagagaagttaagataccaaaataaatcaaattttagttaagggaccaaa 16350412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 37412796 - 37412596
Alignment:
Q  24 atctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaa 114  Q
    |||||| |||||||||||||||||||||| || |||||||||| ||||||||         |||||| ||||||||||||||| ||| |||  |||||||    
T  37412796 atctccgtcaaccttcaacaacaagaatctcaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttgaattaaaactaacgaaaagaactaaaa 37412697  T
Q  115 tgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    |||||||| || |||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  37412696 tgtgtaacggaaagaagtcaagggaccaaaataaatcgaattttaattaagagaccaaagcgatactaactaaatagttaagggaccaaaaatgcaattt 37412597  T
Q  214 a 214  Q
    |    
T  37412596 a 37412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 37412817 - 37412961
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||    
T  37412817 aaaatctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaatggaccaaaataaattgaattttaattaagggacc 37412916  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || | |||||||| ||||||||| |||| ||||||||||||||||    
T  37412917 aatgcgatactacttaaatagttaaggggccaaaaatgcaattta 37412961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 22 - 216
Target Start/End: Complemental strand, 38275671 - 38275478
Alignment:
Q  22 tcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa 121  Q
    ||||||||||||||||||||||||||||||||||||| ||  | |  |||||||||||||| |||||||||||||| ||||||| ||| |||||||||||    
T  38275671 tcatctccatcaaccttcaacaacaagaatcccagaagaaaataa--agaaaatctaacgtctttgaattaaaactaacggaaaggaccaaaatgtgtaa 38275574  T
Q  122 cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaac 216  Q
     |||| |||||||| | |||||| |||||| ||||||||||||| ||||||||  ||||||| ||||||||| ||||| ||||||| |||||||||    
T  38275573 tagagggaagttaaagaaccaaaataaatcaaattttaattaagggaccaaagcaatactacataaatagttaagggatcaaaaatacaatttaac 38275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 27883618 - 27883471
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |    
T  27883618 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttacttaaggg 27883519  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||| ||| ||||||||| |||||| ||||||||||||||    
T  27883518 accaaagcgatattacttaaatagttaagggacaaaaaatgcaattta 27883471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 32933741 - 32933590
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||  ||||||| ||||| |||||||| ||||| |    
T  32933741 aagaaaacctgacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaaagagaagttaaaagaccaaaataaatggaattttagttaaggg 32933642  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32933641 atcaaagtgatactacctaaatagttaagggaccaaaaatgcaatttaacct 32933590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 33819556 - 33819782
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||         ||||| ||||||||||    
T  33819556 ctcctcttattcatcttcatatcatctccatcaatcttcaacaacaagaatctcagaaaaatttcagaagaaaatgaagaaaacctaacatttttgaatt 33819655  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||  | ||||| |||||| |||||||||||||| |||||| |||||| ||||||||||||  |||||||||||||||||||||| ||    
T  33819656 aaaactaacggaaatagccaaaatatgtaacggagagaagttaagg-accaaaataaatcaaattttaattaaaggaccaaagtgatactacctaaacag 33819754  T
Q  192 ttagggaccaaaaatgcaatttaacctt 219  Q
    ||| |   ||||||| ||||||| ||||    
T  33819755 ttatgagacaaaaatacaatttagcctt 33819782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 34820515 - 34820666
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||| |||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |    
T  34820515 aagaaaatctaacgtttttaaattaaaactaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaaggg 34820614  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| || ||||||||||||||| ||||||||||||| |||||||||||    
T  34820615 accaaagcgagactacctaaatagttaagggaccaaaaatacaatttaacct 34820666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 41659971 - 41659756
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||         ||||||||||||||||    
T  41659971 ctccttttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 41659872  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| | | ||||||||||||||||||||||||||  |||||| |||||| ||||||||||||| |||||||| |||||||  |||||||    
T  41659871 aaaactaacggaaaggcccaaaatgtgtaacagagagaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatag 41659772  T
Q  192 tt-agggaccaaaaat 206  Q
    || |||||| ||||||    
T  41659771 ttaagggacaaaaaat 41659756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 39912870 - 39913011
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||| ||||||||    
T  39912870 ctaacgtttttgaattaaaactaacggaaatgaccaaaaggtgtaacagagagaaagttaagggaccaaaataaatctaattttaattaagggaccaaag 39912969  T
Q  175 tgatactacct-aaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  39912970 tgatactacctaaaatagttaagggaccaaaaatgcaattta 39913011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 76 - 219
Target Start/End: Complemental strand, 13354319 - 13354175
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||  ||||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  13354319 ctaacgtttttgaattaaaactaacggaaatgaccaaaatatgtaatggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagc 13354220  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||||||||||||| ||||||| ||||| ||||||| ||||    
T  13354219 gatactacctaaatagttaagggaccgaaaattcaatttagcctt 13354175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 16736251 - 16736099
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||  ||||||||||   ||||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |    
T  16736251 aagaaaacctaacgttttcaaattaaaactactggaaaggaccaaaatgtgtaactgagagaagttaagggaccaaaataaatcgaattttaattaaggg 16736152  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  16736151 accaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagcctt 16736099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 16261030 - 16261265
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||| ||||||  |||||||  | ||||||||         |||| |||||||||||    
T  16261030 ctcctccttttcatcttcatatcatctccatcaacctttaacaacaaaaatccccaaaaaattctagaagaaaatgaagaaaacctaatgtttttgaatt 16261129  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||  ||||||| |||||||||||| |||| ||| |||||||| ||| |||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  16261130 aaaactaaccaaaatgaccaaaatgtgtaacggagataagctaagggacaaaaataaatcaaattttagttaagggaccaaagcgatactacctaaatag 16261229  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    || ||||||||||||| ||||||| |||||| ||||    
T  16261230 ttaagggaccaaaaatacaatttagccttttttttt 16261265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 4104295 - 4104162
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    |||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||  |||||| |||||||||||||||||||| |||||||| ||||||    
T  4104295 tttttgaattaaaactaacggaaaggaccaaaatgtataacagagagaagttaagataccaaaataaatcgaattttaattaagggaccaaagcgatact 4104196  T
Q  182 acctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||| |||||||||||||||||||||    
T  4104195 acctaaatagttaagggaccaaaaatgcaattta 4104162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 12304390 - 12304537
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||| | |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||  |    
T  12304390 aagaaaacctaacatttttgaattaaaactaacggaaatggccaaaatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaattaaagg 12304489  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||| ||| |||||| ||||||||||||||    
T  12304490 accaaagcgatactacctaaattgttaagggacaaaaaatgcaattta 12304537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 20908747 - 20908894
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| || |||||||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||   |    
T  20908747 aagaaaacctaaagtttttgaattaaaactaacagaaatgaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagagg 20908846  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  20908847 accaaagcgatactacctaaatagttaagggaccaaaaatacaattta 20908894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 27132746 - 27132893
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||||| |||||| || ||||||||| |||||||| |||||||||||||||||||  |    
T  27132746 aagaaaacctaacatttttgaattaaaactaacggaaatgactaaaatatgtaacggatagaagttaatggaccaaaataaatcgaattttaattaaagg 27132845  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  || ||||||||||||||| |||||||||||||||||||||    
T  27132846 accaaatcgacactacctaaatagttaagggaccaaaaatgcaattta 27132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 36442359 - 36442136
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttg-aatt 91  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||         |||||||||||  ||||    
T  36442359 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatgccataaaaatttcagaagaaaatgaagaaaatctaacgtttttttaatt 36442260  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||| | |||||||||| | |||||| |||||| |||||| |||||  |||||||  ||||||||||||||||    
T  36442259 aaaactaacggaaaggaccaaaatgtgtaacggggagaagttaatgaaccaaaataaatcaaatttttattaatagaccaaaacgatactacctaaatag 36442160  T
Q  192 t-tagggaccaaaaatgcaattta 214  Q
    |  ||||| ||||||| |||||||    
T  36442159 tgaagggaacaaaaatacaattta 36442136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 5961819 - 5961667
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || |||| ||| |||||||||||||||||||||||||||||||||| |||||| | ||||||||| | |    
T  5961819 aagaaaacctaacatttttgaattaaaactaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaatttttaattatggg 5961720  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    | ||||| |||||||||||||||||| |||| |||||||||||||||| ||||    
T  5961719 atcaaagcgatactacctaaatagttaaggggccaaaaatgcaatttagcctt 5961667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 17856424 - 17856572
Alignment:
Q  68 aagaaaatctaacgt-ttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||||| |||| |||||||||| |||||||| |||||||||| |||||||||||||||||| ||||||| |||||| |||||||||||||     
T  17856424 aagaaaacctaacgtatttttaattaaaactaacggaaataactaaaatgtataacagagagaagttaagagaccaaaataaatcaaattttaattaagg 17856523  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||   ||||||||||||||||| |||||||||||||||||||||    
T  17856524 gaccaaaccaatactacctaaatagttaagggaccaaaaatgcaattta 17856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 210
Target Start/End: Original strand, 12304021 - 12304164
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||| | ||||||||||||  |||||||||||| ||||||| |||||||||||||||||||  |    
T  12304021 aagaaaacctaacatttttgaattaaaactaacggaaatggccaaaatgtgtaacgaagagaagttaagagaccaaaataaatcgaattttaattaaagg 12304120  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaa 210  Q
    || |||| |||||||||||||||||| |||||||||||||||||    
T  12304121 acgaaagcgatactacctaaatagttaagggaccaaaaatgcaa 12304164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 15829870 - 15829747
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||| |||| |||||||||||||||| ||||||||||| || ||||||||| || |||||||||||||||||| ||||| |||||||||||||| |    
T  15829870 aagaaaatttaacatttttgaattaaaactaacggaaatgaccaagatgtgtaacggatagaagttaagggaccaaaataaattgaattttaattaaggg 15829771  T
Q  168 accaaagtgatactacctaaatag 191  Q
    ||||||||||||||||||||||||    
T  15829770 accaaagtgatactacctaaatag 15829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 21470532 - 21470675
Alignment:
Q  69 agaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcga 168  Q
    |||||| ||||||||||| |||||||||| ||||||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| ||    
T  21470532 agaaaacctaacgttttttaattaaaactaacggaaaggaccaaaatgtgtaacgtagagaagttaagggaccaaaataaatcgaattttaattaaggga 21470631  T
Q  169 ccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    || ||| |||||||||||||||||| |||||| ||||||| ||||    
T  21470632 cc-aagcgatactacctaaatagttaagggactaaaaatggaatt 21470675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 41659972 - 41660131
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||||| || ||||  || ||||||||||| |||||| ||||||||  |||||| |||||  |||||||||||||     
T  41659972 aagaaaatctaacgtttttgaattaaaactaacagaaagaaccaaaatgtgtaagcagaga-aagttaagataccaaaataaattaaattttaattaaga 41660070  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    ||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  41660071 gaccaaagtgatactaattaaatagttaaaggaccaaaaatgcaatttaaccttttatttt 41660131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 5921622 - 5921769
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| || |||  ||||||||||||||||||| |    
T  5921622 aagaaaatccaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaaagagaagttaaggaacaaaaaaaaatcgaattttaattaagag 5921721  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||  ||||||||| ||||| ||||||  |||||||    
T  5921722 accaaagcgatactatataaatagttaagggatcaaaaacacaattta 5921769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 15137040 - 15137199
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| |||  ||||||| |||||||| ||||||| |||||||| |||||| ||||||||||||| |    
T  15137040 aagaaaacctaacgtttttgaattaaaactaacggaaaggacccaaatgtgcaacagagaaaagttaaaggaccaaaataaatcaaattttaattaaggg 15137139  T
Q  168 accaaagtgatactacctaaatagtta-gggaccaaaaatgcaatttaaccttttatttt 226  Q
    ||||||  | ||||||||||||||||| | ||||||||||| |||||| |||||| ||||    
T  15137140 accaaatcggtactacctaaatagttatgtgaccaaaaatgtaatttagccttttttttt 15137199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 16655842 - 16655993
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| ||||||||||   ||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||| ||||  |    
T  16655842 aagaaaacctaacgttttttaattaaaactagtggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaaagg 16655941  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  16655942 accaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacct 16655993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 31450902 - 31451049
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| ||||||||||||  ||||||||||| ||| |||| |||||||||||||| ||||| |    
T  31450902 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacgtagagaagttaaaggatcaaaataaatcgaattttagttaaggg 31451001  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  |||||||||||||||||| ||||| |||||||||||||||    
T  31451002 accaaatcgatactacctaaatagttaagggatcaaaaatgcaattta 31451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 44915889 - 44915739
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||  |||| ||||||||  |||||| |||||| ||||||||||||| |    
T  44915889 aagaaaatttaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaa-ggagataagttaagataccaaaataaatcaaattttaattaaggg 44915791  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| |||||||  ||||||||| |||||| ||||||||||||||||||    
T  44915790 accaaagcgatactaattaaatagttaagggactaaaaatgcaatttaacct 44915739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 39912764 - 39912630
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatac 180  Q
    |||||||||||||||| ||| ||| ||| |||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||    
T  39912764 tttttgaattaaaactaacgtaaaagaccaaaatgtgtaacagagagaaagttaacggaccaaaataaattgaattttaattaagggaccaaagcgatac 39912665  T
Q  181 tacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||| ||||||||||||| |||||||    
T  39912664 tacctaaatagttaagggaccaaaaatacaattta 39912630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 27476509 - 27476368
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaa-tgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| ||||| | ||| |||| |||||||  ||||||| ||||||||||||| |||||||||||||||||||| || |||||    
T  27476509 ctaacgtttttgaattaaaactaacggataggaccaaaaatgtgtaaaggagagaatttaagggaccaaaataaatcgaattttaattaagggaacaaag 27476410  T
Q  175 tgatactacctaaatagt-tagggaccaaaaatgcaatttaa 215  Q
     ||||||||||||||||| |||||||||||||| ||||||||    
T  27476409 cgatactacctaaatagtctagggaccaaaaatacaatttaa 27476368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 16261020 - 16260874
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||| ||| ||||||| |||| |||||||||||| ||||||||  ||||||||||||| ||||| |    
T  16261020 aagaaaacctaacgtttttgaattaaaactaacaaaaaggaccaaaatgtttaacggagagaagttaaaggaccaaa-aaaatcgaattttagttaaggg 16260922  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||    
T  16260921 accaaagcgatactacctaaatagttaagggaccaaaaatgctattta 16260874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 34127801 - 34127947
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||| |||| ||||||||| |||| ||||| |    
T  34127801 aagaaaacataacgtttttgaattaaaactaacggaaaggaccaaa-tgtgtaacagagagaagttaagggatcaaaataaatcgaactttagttaaggg 34127899  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||| ||||||||| |||| |||||||| |||||||    
T  34127900 accaaagcgatactacttaaatagttaagggtccaaaaatacaattta 34127947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 10833270 - 10833416
Alignment:
Q  68 aagaaaatctaacgtttttg-aattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||  |||||||||| |  |||||||| ||||||| ||||||||||||||||| |||||||| ||||||||||||||||| ||     
T  10833270 aagaaaacctaacgtttttttaattaaaactaatcgaaatgaccaaaatgtataacagagagaagttaatggaccaaaataaatcgaattttaattgagg 10833369  T
Q  167 gaccaaagtgatactacctaaatag-ttagggaccaaaaatgcaatt 212  Q
    ||| |||| |||||||||||||||| | |||||||||||||||||||    
T  10833370 gactaaagcgatactacctaaatagctaagggaccaaaaatgcaatt 10833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 39149994 - 39149868
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||||| |||| |||||||||||||| ||||  |    
T  39149994 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaaatagaagttaagggatcaaaataaatcgaattttagttaaagg 39149895  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    || ||||||||||||  ||||||||||    
T  39149894 actaaagtgatactatttaaatagtta 39149868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 45389313 - 45389134
Alignment:
Q  34 accttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagtt 133  Q
    ||||||||||||||||||| ||||| ||  | |  |||||| ||||  |||||||||||||| | ||||||| ||| ||||||||||||  ||| |||||    
T  45389313 accttcaacaacaagaatctcagaagaaaatga--agaaaacctaatatttttgaattaaaattaacggaaaggaccaaaatgtgtaacgaagaaaagtt 45389216  T
Q  134 aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || |||||||| |||||| ||||||||||||| |||||||  || ||||||||||||||| |||||||||||||||||||||    
T  45389215 aatggaccaaaataaatcaaattttaattaagggaccaaaacgacactacctaaatagttcagggaccaaaaatgcaattta 45389134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 4120900 - 4120767
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    |||||||||||||||| | ||||| ||| ||||| |||||| ||||||| |||| |||||||| ||||||||||||| |||||| |||||||| ||||||    
T  4120900 tttttgaattaaaactaatggaaacgaccaaaatatgtaacggagagaaattaaaggaccaaaataaatcgaattttgattaagggaccaaagcgatact 4120801  T
Q  182 acctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||| |||||| ||||||||||||||    
T  4120800 acctaaatagttaagggacaaaaaatgcaattta 4120767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 44915899 - 44916080
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||| ||||||||||||||| ||||| ||||| |||||||||||| ||||||||         || |||||||||||||    
T  44915899 ctcctcttcttcatcttcatatcatttccatcaaccttcaataacaaaaatccgagaaaaatttcagaagaaaatgaagaaaacctcacgtttttgaatt 44915998  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    |||||| ||||||| ||| ||||| |||||| |||||||||||||  |||||| |||||  ||||||||||||| |||||||    
T  44915999 aaaactaacggaaaggaccaaaatatgtaacggagagaagttaagataccaaaataaatgaaattttaattaagggaccaaa 44916080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 37744568 - 37744452
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    |||||| |||| ||||||||||||  ||||||||||||||| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37744568 acggaattgaccaaaatgtgtaacgaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaaggg 37744469  T
Q  198 accaaaaatgcaattta 214  Q
    |||||||||| ||||||    
T  37744468 accaaaaatgtaattta 37744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 40694345 - 40694193
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | | ||||||| | |||||||| ||| ||||||||||||||||| ||| |||||||||| ||||||||| |    
T  40694345 aagaaaacctaacgtttttgaattaaaagtaatggaaatggccaaaatgtgcaactgagagaagttaagggactaaaataaatcgaatgttaattaaggg 40694246  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    || |||  |||||||||||||||||| |||||||||||||  |||||| ||||    
T  40694245 actaaaacgatactacctaaatagttaagggaccaaaaatataatttagcctt 40694193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 33819546 - 33819396
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||| ||||||| ||||| ||||||  ||| |||||||||||||||| |||||| ||||||||||||| |    
T  33819546 aagaaaacctaacatttttgaattaaaactaacgaaaatgaccaaaatctgtaacgaagaaaagttaagggaccaaa-taaatcaaattttaattaagag 33819448  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  | |||||||||||||||| | ||||||||| |||||||||||||    
T  33819447 accaaaacggtactacctaaatagttaatggaccaaaagtgcaatttaacct 33819396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 203
Target Start/End: Original strand, 34484303 - 34484418
Alignment:
Q  89 attaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaa 188  Q
    ||||||||| ||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  34484303 attaaaactaacggaaatgaccaaaatgtgtaacggagataagttaagggaccaaaataaatcgaattttaattaagataccaaagcgatactacctaaa 34484402  T
Q  189 tagtt-agggaccaaa 203  Q
    || || ||||||||||    
T  34484403 taattaagggaccaaa 34484418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 25642418 - 25642273
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || |||| ||  ||||||||||||||| | |||||||| ||||||| ||||||||||||||||||||      
T  25642418 aagaaaacctaacatttttgaattaaaactaactgaaaggatcaaaatgtgtaacagataaaagttaagagaccaaaataaatcgaattttaattaagga 25642319  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||||| |||||||| ||||||||| |||||| |||||| |||||    
T  25642318 accaaagcgatactacttaaatagttaagggactaaaaatacaatt 25642273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 27246209 - 27246065
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| || ||||||||         ||||||||||| ||||    
T  27246209 ctcctcttcttcattttcatatcatcttcatcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaatgaagaaaacctaacgttttttaatt 27246110  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaag 136  Q
    |||||| |  |||||||| ||||||||||||||||||||||||||    
T  27246109 aaaactaatagaaatgacaaaaatgtgtaacagagagaagttaag 27246065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 36211500 - 36211353
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||  | ||||||||| |||||||| |||||| ||||||||||||| |    
T  36211500 aagaaaacctaacgtttttgaattaaaactaacataaatgaccaaaatgtgtaacgaacagaagttaaaggaccaaaataaatcaaattttaattaaggg 36211401  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   |||| ||||||| |||| || ||||||||||||||||||    
T  36211400 accaaaacaatacaacctaaacagttaagtgaccaaaaatgcaattta 36211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 36442370 - 36442509
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||| ||||||||| ||| |||| |||||  ||||||||||||  |    
T  36442370 aagaaaacctaatgtttttgaattaaaactaacagaaatgactaaaatgtgtaacagaaagaagttaaaggatcaaaataaattaaattttaattaaagg 36442469  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    | |||||  |||||| |||||||||| |||||||||||||    
T  36442470 atcaaagcaatactatctaaatagttaagggaccaaaaat 36442509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 32503696 - 32503574
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||||| |||||| | | ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||      
T  32503696 aagaaaatctaacgtttttgacttaaaattaaaggaaatgatcaaaatgtgtaacagagagaagttaaggaaccaaaataaatcgaattttagttaagga 32503597  T
Q  168 accaaagtgatactacctaaata 190  Q
    | ||||  |||||||||||||||    
T  32503596 agcaaaacgatactacctaaata 32503574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 18565282 - 18565386
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    ||||| |||||||| || ||||||||| |||||| |||||||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||||    
T  18565282 aaaatatgtaacagggaaaagttaaggaaccaaaataaatcgaattttaattaagggacccaagcgatactacctaaatagttaagggaccaaaaatgca 18565381  T
Q  210 attta 214  Q
    |||||    
T  18565382 attta 18565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 5961829 - 5961894
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca 66  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5961829 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca 5961894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 193
Target Start/End: Original strand, 11943728 - 11943849
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||| ||| |||||||||||| ||||||    | |||||||||||| |||||||||||| | |||||| |||||||||||||||||||       
T  11943728 aagaaaatctaacttttatgaattaaaactgacggaa----ccaaaatgtgtaacggagagaagttaatgaaccaaaataaatcgaattttaattaaagt 11943823  T
Q  168 accaaagtgatactacctaaatagtt 193  Q
    ||||||| ||||||||||||||||||    
T  11943824 accaaagcgatactacctaaatagtt 11943849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 27914115 - 27913918
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat--------ctaacgtttttgaattaaaac 96  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||| | ||||||||| || ||||||||        |||| ||||||||||||||||    
T  27914115 tcttcttcatcttcatatcatctccatcaaccttcaacaacaataattcgagaaaaattccagaagaaaatgaaaaaacctaatgtttttgaattaaaac 27914016  T
Q  97 ttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    | ||  ||| ||| ||||| |||||| |||||||||||||  | |||| |||||  ||||||||| ||| ||| |||| |||||||  ||||||||||    
T  27914015 taacataaaagaccaaaatatgtaacggagagaagttaagatagcaaaataaattaaattttaataaagggactaaagcgatactaattaaatagtta 27913918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 39454712 - 39454816
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt-tagggaccaaaaatgca 209  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||  | ||||| |||||||||| ||||||  ||||||||||||||||    
T  39454712 aaaatgtgtaacagagagaaattaagggacaaaaataaatcgaattttaattaaggaatcaaagcgatactacctgaatagtcaagggaccaaaaatgca 39454811  T
Q  210 attta 214  Q
    |||||    
T  39454812 attta 39454816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 27246219 - 27246371
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||||||||| | || |||| ||| |||||||||||  ||||| || |||||  |||||| |||||| |||||||||||||     
T  27246219 aagaaaacctaacgtttttgaattaaaaataaccgaaaggaccaaaatgtgtaaggagaga-aaattaagataccaaaataaatcaaattttaattaagg 27246317  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||| ||| |||  ||||||||| ||||||||||||||||||||| ||||    
T  27246318 gaccaaagcgatcctaattaaatagttaagggaccaaaaatgcaatttagcctt 27246371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 20297498 - 20297413
Alignment:
Q  130 agttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||| |||||||||||||||||||| |||||||  |||||||||| ||||||| |||||||||||||| ||||||    
T  20297498 agttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctgaatagttaagggaccaaaaatgaaattta 20297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 214
Target Start/End: Original strand, 36211697 - 36211782
Alignment:
Q  130 agttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||| || |||||||||| |||||||    
T  36211697 agttaagggaccaaaataaatcgaattttaattaagggacgaaagcgatactacctaaatagttaagagaccaaaaatacaattta 36211782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 219
Target Start/End: Complemental strand, 34484305 - 34484233
Alignment:
Q  148 aatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  34484305 aatcaaattttaattaagggaccaaagtgatactacctaaatagttaaaggaccaaaaatgcaatttaacctt 34484233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 16350227 - 16350079
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||| |||||||||||||||  | ||||||||| |||||||||||  ||||| ||||||||  |||||| |||||| |||||||||||||     
T  16350227 aagaaaacctaacatttttgaattaaaacaaatggaaatgaccaaaatgtgtaaggagaga-aagttaagataccaaaataaatcaaattttaattaagg 16350129  T
Q  167 gaccaaagtgatactacctaaatagt-tagggaccaaaaatgcaatttaa 215  Q
    ||||||   |||||||  ||||||||  || |||||||||||||||||||    
T  16350128 gaccaatacgatactaattaaatagtcaagagaccaaaaatgcaatttaa 16350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 5720284 - 5720141
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| ||||||| ||| |||||||| ||  ||||| ||||||||  |||||| |||||| ||||||||||||   ||||||     
T  5720284 ctaacgtttttgaattaaaactaacggaaaagaccaaaatgtgaaaggagaga-aagttaagataccaaaataaatcaaattttaattaaagaaccaaaa 5720186  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
      ||| ||  ||||||||| |||||||||||||||||||||||||    
T  5720185 caatattaattaaatagttaagggaccaaaaatgcaatttaacct 5720141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10833260 - 10833200
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaa 61  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  10833260 ctcctctttttcatcatcatatcatctccatcaaccttcaccaacaagaatcccagaaaaa 10833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 27914132 - 27914282
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    |||| |||||||||||||||||||| | ||||||| ||| ||||||||||| |||||| ||||||||   ||||| |||||| |||||||| ||||  ||    
T  27914132 aaaacctaacgtttttgaattaaaattaacggaaaggaccaaaatgtgtaa-agagagaaagttaagatgccaaaataaatcaaattttaactaaggaac 27914230  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||  |||||||  ||||||||| ||||| ||||||| ||||||| |||||    
T  27914231 caaaacgatactaattaaatagttaagggatcaaaaatacaatttagccttt 27914282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5921612 - 5921558
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatccca 55  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  5921612 ctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatccca 5921558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11943718 - 11943667
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatc 52  Q
    |||||||||||||| |||||||||||||||||||| || |||||||||||||    
T  11943718 ctcctctttttcatcttcatatcatctccatcaacatttaacaacaagaatc 11943667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12304380 - 12304330
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaat 51  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  12304380 ctcctctttttcatcttcatatcatctccatcaactttcaacagcaagaat 12304330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #100
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 44610926 - 44610861
Alignment:
Q  153 aattttaattaagcgaccaaagtgatactacctaaatagtta-gggaccaaaaatgcaatttaacct 218  Q
    ||||||||||||| ||| |||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  44610926 aattttaattaagggac-aaagcgatattacctaaatagttaagggaccaaaaatgcaatttaacct 44610861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #101
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 23992172 - 23992289
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
    ||||||||| |||||||  |||||| |||||| || ||||||||||| |||||| ||||||| ||| | |||||||  |||||||  ||||||||| |||    
T  23992172 acggaaatgtctaaaattagtaacaaagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttcagg 23992271  T
Q  197 gaccaaaaatgcaattta 214  Q
    |||||||||  |||||||    
T  23992272 gaccaaaaagacaattta 23992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #102
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 44612633 - 44612548
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaat 161  Q
    ||||||||||||| ||||||||||||||        || ||| |||||||||||| || |||||||||||||||||| |||||| |||||||||    
T  44612633 aagaaaatctaacatttttgaattaaaa--------aaggaccaaaatgtgtaacggatagaagttaagggaccaaaataaatcaaattttaat 44612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #103
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 1580148 - 1580230
Alignment:
Q  139 accaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||| |||||| ||||||||||||| |||||||| |||||||  ||||||||| ||| ||||||||   ||||||||||||    
T  1580148 accaaaataaatcaaattttaattaagggaccaaagcgatactatttaaatagttaaggaaccaaaaacataatttaaccttt 1580230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #104
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 1580113 - 1580030
Alignment:
Q  111 aaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    |||||||| ||||||||||| ||||||  |||||| |||||| ||||||||||||| |||||||  |||||||  ||||||||||    
T  1580113 aaaatgtgcaacagagagaaagttaagataccaaaataaatcaaattttaattaag-gaccaaaacgatactaattaaatagtta 1580030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #105
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Complemental strand, 3603647 - 3603596
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagaga 127  Q
    |||||||||||||||||||  | ||||||| ||||||||| |||||||||||    
T  3603647 ctaacgtttttgaattaaatttaacggaaaggactaaaatatgtaacagaga 3603596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #106
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 15136350 - 15136275
Alignment:
Q  90 ttaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    |||||||| || |||| || |||||||||||||| ||| ||||||| ||| ||||  | |||||||||||||||||    
T  15136350 ttaaaactaacagaaaggattaaaatgtgtaacaaagataagttaatggatcaaataatatcgaattttaattaag 15136275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #107
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 29078011 - 29078062
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagaga 127  Q
    ||||| |||||||||||||||| | | ||||||| |||||||||||||||||    
T  29078011 ctaacatttttgaattaaaactaatgaaaatgaccaaaatgtgtaacagaga 29078062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39912788 - 39912843
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||||||| |||||||||||||||       |||||||||| |||||||||||||||    
T  39912788 ctcctctttttcatcttcatatcatctcca-------tcaacaacaaaaatcccagaaaaatt 39912843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 40469092 - 40469156
Alignment:
Q  155 ttttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||||||| |||||||||||||| |  ||||||||| |||||||||||| ||| || |||||    
T  40469092 ttttaattaagggaccaaagtgataccaaataaatagttaagggaccaaaaacgcatttaaacct 40469156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 7e-76; HSPs: 95)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 37393637 - 37393860
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  37393637 ctcctctttttcattttcatatcatcttcatcaaccttcaataacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 37393736  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||    
T  37393737 aaaacttacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatag 37393836  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  37393837 ttaagggaccaaaaatgcaattta 37393860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18914420 - 18914634
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||| ||||||||||||||||||||||| |||||||| | |||||| ||||| |||||||||||||||||||||||||||||| ||    
T  18914420 ctcctctttttcatcttcgtatcatctccatcaaccttcaacgacaagaattctagaaaagtttcagaagaaaatctaacgtttttgaattaaaactaac 18914519  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-gggac 199  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| | || ||| ||||||||||||||| |||||    
T  18914520 ggaaaagaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaaggacaagagcgatgctacctaaatagttaggggac 18914619  T
Q  200 caaaaatgcaattta 214  Q
    |||||||||||||||    
T  18914620 caaaaatgcaattta 18914634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23244741 - 23244515
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||    
T  23244741 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttgaatt 23244642  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||   ||||||| |||||||| ||||| |    
T  23244641 aaaactaacggaaacgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaaagaaccaaagcgatactacataaatgg 23244542  T
Q  192 ttag-ggaccaaaaatgcaatttaacc 217  Q
    |||| ||||||||||||||||||||||    
T  23244541 ttagtggaccaaaaatgcaatttaacc 23244515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 24456813 - 24457035
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||         |||||||||||||||||    
T  24456813 tcctcattttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatta 24456912  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||||||||||||||    
T  24456913 aaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaggcgatactacctaaatagt 24457012  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | |||||||||||||||||||||    
T  24457013 taagggaccaaaaatgcaattta 24457035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40032644 - 40032429
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||| |||| |||||| |||||||||| ||    
T  40032644 ctcctctttttcatcttcatatcatctctatcaaccttcaacaacaagaatcccataaaaattccagaagaaaacctaatgttttttaattaaaactaac 40032545  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaa-ttaagcgaccaaagtgatactacctaaatagtt-aggga 198  Q
     |||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||| || || ||    
T  40032544 agaaaggaccaaaatgtgtaacagacagaagttaagggaccaaaataaatcgaattttaatttaagagaccaaagcgatactacctaaataattaagtga 40032445  T
Q  199 ccaaaaatgcaattta 214  Q
    ||||||||||||||||    
T  40032444 ccaaaaatgcaattta 40032429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40040388 - 40040165
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  40040388 ctcctctttttcatcttcatatcatctccatcaaccttgaacaacaagaatcccagaaaaattacagaagaaaatgaagaaaacctaacgtttttgaatt 40040289  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| | | |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||  ||||||| ||||||||||||||||    
T  40040288 aaaactaacggaaagggccaaaatgtgtaacggagagaagttaagggaacaaaataaatcgaattttaattaaggtaccaaagcgatactacctaaatag 40040189  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  40040188 ttaagggaccaaaaatgcaattta 40040165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 26736351 - 26736125
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  26736351 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaagcctaacgtttttgaatt 26736252  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||||||||||| |||||||||||| |||||  ||||||||  ||| |||||||| ||||||||||||||||    
T  26736251 aaaactaacggaaaggaccaaaatgtgtaacagagagaaggtaagggaccaaaataaattaaattttaaaaaagggaccaaagcgatactacctaaatag 26736152  T
Q  192 tt-agggaccaaaaatgcaatttaacc 217  Q
    || || |||||||||||||||||||||    
T  26736151 ttaagagaccaaaaatgcaatttaacc 26736125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 39912077 - 39912312
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat-----------ctaacgtttttgaa 89  Q
    |||||||||||||| |||||||||||||| |||| ||| |||||||||||||||| |||||||  | ||||||||           |||| |||||||||    
T  39912077 ctcctctttttcatcttcatatcatctccgtcaaactttaacaacaagaatcccaaaaaaattctagaagaaaatgaaaaaaaaatctaatgtttttgaa 39912176  T
Q  90 ttaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  39912177 ttaaaactaacggaaatgactaaaatgtgtaatggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaat 39912276  T
Q  190 agtt-agggaccaaaaatgcaatttaaccttttatt 224  Q
    |||| |||||||||||||| ||||||||||||||||    
T  39912277 agttaagggaccaaaaatgtaatttaaccttttatt 39912312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 214
Target Start/End: Complemental strand, 44255089 - 44254868
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaa 93  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||| ||||||||||||    
T  44255089 cctcgttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaataaagaaaacctaacatttttgaattaa 44254990  T
Q  94 aacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt 193  Q
    |||| |||||||  |||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||| |||||||||    
T  44254989 aactaacggaaaacactaaaatgtgtaacagaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacttaaatagtt 44254890  T
Q  194 aggga-ccaaaaatgcaattta 214  Q
    | ||| ||||||||||||||||    
T  44254889 aaggatccaaaaatgcaattta 44254868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 30650416 - 30650193
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||         |||| |||||| ||||    
T  30650416 ctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcccataaaaacttcagaagaaaatgaagaaaacctaaggttttttaatt 30650317  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||| |||||||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  30650316 aaaactaacggaaaggaccaaaatgtgtaacggagagaagttaaggaaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatag 30650217  T
Q  192 ttag-ggaccaaaaatgcaattta 214  Q
    |||| |||| ||||||||||||||    
T  30650216 ttagaggactaaaaatgcaattta 30650193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1825969 - 1826174
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||         |||| |||||||||||||||||||||| |     
T  1825969 ctcctccttttcatcttcatatcatctccttcaaccttcgacaacaagaatcccagaaaaa---------aaaacctaacgtttttgaattaaaactaat 1826059  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    | ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  1826060 gtaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggac 1826159  T
Q  200 caaaaatgcaattta 214  Q
    ||||||| |||||||    
T  1826160 caaaaatacaattta 1826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 1860414 - 1860619
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||         |||| |||||||||||||||||||||| |     
T  1860414 ctcctccttttcatcttcatatcatctccttcaaccttcgacaacaagaatcccagaaaaa---------aaaacctaacgtttttgaattaaaactaat 1860504  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    | ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  1860505 gtaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggac 1860604  T
Q  200 caaaaatgcaattta 214  Q
    ||||||| |||||||    
T  1860605 caaaaatacaattta 1860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 8654162 - 8653931
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||         ||||||||||||||||    
T  8654162 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 8654063  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||||||| || ||||| ||||||| |   |||||||||||||||| ||||| |||||||||||||| |||||||  ||||||||||||||||    
T  8654062 aaaactaacggaaataaccaaaatatgtaacaaatgaaagttaagggaccaaaataaattgaattttaattaagggaccaaaacgatactacctaaatag 8653963  T
Q  192 tta-gggaccaaaaatgcaatttaacctttta 222  Q
    ||| |||||||||||| ||||||| |||||||    
T  8653962 ttaggggaccaaaaatacaatttagcctttta 8653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31230773 - 31230996
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||||| || ||||||||         ||||||||||||||||    
T  31230773 ctcctctttttcatcttcatatcatctctataaaccttcaacaacaagaatcccggaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 31230872  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||| ||||||||  |||||||||||||||    
T  31230873 aaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggatcaaaataaattgaattttaattaagggaccaaagcaatactacctaaatag 31230972  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||| ||||||    
T  31230973 ttaagggaccaaaaatgtaattta 31230996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 6843712 - 6843494
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| | |||||||||||||||||||||||||||||| |||||  ||| ||  | |  |||||| ||||||||||| |||||||||| ||    
T  6843712 ctcctctttttcatctccatatcatctccatcaaccttcaacaacaataatccttgaagaaaatga--agaaaacctaacgttttttaattaaaactaac 6843615  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagt--taagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
     |||||||| ||||||||||||||||||||||  |||||||||||| |||||| ||||||||||||| || || ||||||||||||||||||||| ||||    
T  6843614 agaaatgaccaaaatgtgtaacagagagaagttataagggaccaaaataaatcaaattttaattaagggatcatagtgatactacctaaatagttaaggg 6843515  T
Q  198 accaaaaatgcaatttaacct 218  Q
    |||||||||||||||||||||    
T  6843514 accaaaaatgcaatttaacct 6843494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 14920574 - 14920792
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | || ||||||||         |||||||||| ||||||||    
T  14920574 ctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcccaaaaaaaatccagaagaaaatgaagaaaacctaacgttttcgaattaaa 14920673  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    | | || |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||| |||||||||     
T  14920674 agtaacagaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacttaaatagtta 14920773  T
Q  194 agggaccaaaaatgcaatt 212  Q
    |||||||||||||||||||    
T  14920774 agggaccaaaaatgcaatt 14920792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 40094701 - 40094471
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||||||||  ||||| ||||| ||||||||         |||||||| |||||||    
T  40094701 ctcctctttttcatcttcatatcatctccatcaacttttaacaacaagaatcctcgaaaattttcagaagaaaatgaagaaaatctaacgttcttgaatt 40094602  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||| |||||| ||||| |||||||||||||| |||||||| ||||||||||||||||    
T  40094601 aaaactaacggaaatgaccaaaatgtgtaacggagagaagttaaggaaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatag 40094502  T
Q  192 tt-agggac-caaaaatgcaatttaaccttt 220  Q
    || ||||||  ||||||||||||||||||||    
T  40094501 ttaagggacaaaaaaatgcaatttaaccttt 40094471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 29027198 - 29026965
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||  ||||||||         |||||||||| |||||    
T  29027198 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagcatcccataaaaatttctgaagaaaatgaagaaaacctaacgttttagaatt 29027099  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||||||| ||| |||||||| |  |||||||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  29027098 aaaactaacagaaatgaccaaattgtgtaacgggtagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatag 29026999  T
Q  192 -----ttagggaccaaaaatgcaatttaaccttt 220  Q
         | |||||||||||||||||||||||||||    
T  29026998 ctagttaagggaccaaaaatgcaatttaaccttt 29026965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 39240190 - 39240405
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||  | |  ||||||  ||||||||||||||||||||| ||    
T  39240190 ctcctctttttcatcttcatatcatccccgtcaaccttcaacaacaagaatcccagaagaaaatga--agaaaacataacgtttttgaattaaaactaac 39240287  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||| |||||||||||| || |||||||||| ||||||| |||||  ||||||||||||| |||||||  ||||||||||||||| || ||||||    
T  39240288 ggaaaggaccaaaatgtgtaacggaaagaagttaagagaccaaaataaattaaattttaattaagagaccaaaacgatactacctaaataattaagggac 39240387  T
Q  200 caaaaatgcaatttaacc 217  Q
    ||||||||||||||||||    
T  39240388 caaaaatgcaatttaacc 39240405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 758555 - 758342
Alignment:
Q  16 ttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaat 106  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||         ||||||||||||||||||||   | ||||||    
T  758555 ttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaacacctaacgtttttgaattaaaatcaatggaaat 758456  T
Q  107 gactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaa 205  Q
    ||| |||||||||||||||||||| |||||||| |||| |||||  ||||||||||||| |||||||| |||||||||||||||||| |||| |||||||    
T  758455 gaccaaaatgtgtaacagagagaatttaagggatcaaaataaatttaattttaattaagggaccaaagcgatactacctaaatagttaaggggccaaaaa 758356  T
Q  206 tgcaatttaacctt 219  Q
    ||||||||||||||    
T  758355 tgcaatttaacctt 758342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 18018008 - 18017793
Alignment:
Q  9 tttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaactta 99  Q
    |||||| || ||||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||         |||||||||||||||||||||| |    
T  18018008 tttcatctttatatcatcgtcatcaaccttcaacaacaagaatcccataaaaattccagaagaaaataaagaaaaactaacgtttttgaattaaaactaa 18017909  T
Q  100 cggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggga 198  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  18017908 cggaaaggaccaaaatgtgtaacagagagaagttaaaggaccaaaataaattgaattttaattaagtgaccaaagcaatactacctaaatagttaaggga 18017809  T
Q  199 ccaaaaatgcaattta 214  Q
    ||||| ||||||||||    
T  18017808 ccaaatatgcaattta 18017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 119266 - 119120
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| ||| |    
T  119266 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaa-ggaccaaaataaatcgaattttaatcaaggg 119168  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  119167 accaaagtaatactacctaaatagttaagggaccaaaaatgcaattta 119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 7041855 - 7041652
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||| || ||||||||         |||| |||||| ||||    
T  7041855 ctccactttttcatcttcatatcatctccatcaaccttcaacaataagaacctcagaaaaattacagaagaaaatgaagaaaacctaatgtttttcaatt 7041756  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||||| || ||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  7041755 aaaactttcgaaaaggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 7041656  T
Q  192 ttag 195  Q
    ||||    
T  7041655 ttag 7041652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 31230763 - 31230610
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  31230763 aagaaaatataacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 31230664  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||| |||||    
T  31230663 accaaagtgatactacctaaatagttaagggaccaaaaatgtagtttagccttt 31230610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 11639274 - 11639055
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |  | ||||||||         |||||||||| ||||||||    
T  11639274 ctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatgccagaaaaactctagaagaaaatgaacaaaacctaacgtttt-gaattaaa 11639176  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||||||| ||||||| |||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||| |||||||| ||  ||||||||||||||     
T  11639175 acttacgaaaatgaccaaaatgtgtaacggagagaagttaagagacgaaaataaatcgaattttaattaagggaccaaagcgacgctacctaaatagtta 11639076  T
Q  194 agggaccaaaaatgcaattta 214  Q
    |||||| |||||| |||||||    
T  11639075 agggacaaaaaatacaattta 11639055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 30872947 - 30873161
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaat-ttcataagaaaatctaacgtttttgaattaaaactta 99  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||| | |||||  |||| ||||||| |||||||||||||| ||||||| |    
T  30872947 ctcctctttttcatcttcatatcatctccg-caaccttcaacaacaagaatcctaaaaaaaaattcagaagaaaacctaacgtttttgaactaaaactaa 30873045  T
Q  100 cggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggga 198  Q
    || |||||||||||||||||||| || ||||||||||||| |||| |||||| |||||||||||||  | |||| | |||||||| ||||| || |||||    
T  30873046 cgaaaatgactaaaatgtgtaacggatagaagttaagggatcaaaataaatcaaattttaattaaggaatcaaactaatactaccaaaataattaaggga 30873145  T
Q  199 ccaaaaatgcaattta 214  Q
    | ||||||||||||||    
T  30873146 caaaaaatgcaattta 30873161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 35223924 - 35223777
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| | ||| |    
T  35223924 aagaaaatctaacgtttttgaattaaaacaaacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttagtcaaggg 35223825  T
Q  168 accaaagtgatactacctaaatagt-tagggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||    
T  35223824 accaaagcgatactacctaaatagtaaagggaccaaaaatgcaattta 35223777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 35224003 - 35224150
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |    
T  35224003 aagaaaaactaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttagttaaggg 35224102  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  ||||||| |||||||||| |||||||||||||||||||||    
T  35224103 accaaaacgatactaactaaatagttaagggaccaaaaatgcaattta 35224150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 119276 - 119499
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||         || ||||||| |||   ||||||||||    
T  119276 ctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaatttatgaagaagatgaagaaaacctattatttttgaatt 119375  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||| | | ||||||||||||||||||| |||| | ||||||||||||| ||| |||| ||||||||||||||||    
T  119376 aaaactaacggaaatgaccaaaatgtgtaccggtgagaagttaagggaccaaaataaagcaaattttaattaagggactaaagcgatactacctaaatag 119475  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||| ||| |||||||||||    
T  119476 ttaagggatcaacaatgcaattta 119499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 9495242 - 9495105
Alignment:
Q  8 ttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatg 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |    
T  9495242 ttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatctaacgtttttgaattaaaactaacggaaagg 9495143  T
Q  108 actaaaatgtgtaacagagagaagttaagggaccaaag 145  Q
    || ||||| | ||| |||||||||||||| ||||||||    
T  9495142 accaaaatttataagagagagaagttaagagaccaaag 9495105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 12873274 - 12873081
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||| ||||| |||||||||| |||||| ||||||||||| || ||| | |||||||||||| ||||||||||||| |||||||||||||||| ||    
T  12873274 ctcctcttcttcatcttcatatcatatccatcgaccttcaacaagaaaaattcaagaaaaatttcagaagaaaatctaacatttttgaattaaaactaac 12873175  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    ||||| ||  |||||||||||| |||||||||||||  |||||| |||||  ||||||||||||  ||||||||||||||||  ||||||||||    
T  12873174 ggaaaggatcaaaatgtgtaacggagagaagttaagaaaccaaaataaattaaattttaattaaaggaccaaagtgatactaattaaatagtta 12873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 39240180 - 39240033
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||  ||||||||||||| | |||| |||||||||||||||||||| |    
T  39240180 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacgaagagaagttaaggaatcaaaataaatcgaattttaattaaggg 39240081  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  39240080 accaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 39240033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 3869185 - 3869337
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||| ||||||| ||||||||||||||||| |||  ||||||||||||||||||| |    
T  3869185 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaaagtgtaacggagagaagttaagggacaaaaaaaaatcgaattttaattaaggg 3869284  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||  |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  3869285 accaaaacgatactacctaaatagttaagggaccaaaaatacaatttagcctt 3869337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 758580 - 758727
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| |  |    
T  758580 aagaaaacttaacgtttttgaattaaaactaatggaaatgactaaaatgtgtagcagagaaaagttaagggaccaaaataaatcgaattttaatttaagg 758679  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  758680 accaaagtgatactacttaaatagttaagggaccaaacatgcaattta 758727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 23244751 - 23244902
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||||| |||| |    
T  23244751 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatatgtaacatagagaagttaagggatcaaaataaatcgaattttaactaaggg 23244850  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||| ||||||    
T  23244851 accaaagcgatactatctaaatagttaagggaccaaaaatgcaatctaacct 23244902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 37393627 - 37393476
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||  ||||||||||||||||||||| ||||| |||||||||||||| |    
T  37393627 aagaaaaactaacgtttttgaattaaaactaacggaaaggaccaaaatatgtaattgagagaagttaagggaccaaaataaattgaattttaattaaggg 37393528  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  |||||||||||||||||| ||||||||||||| |||||||||||    
T  37393527 accaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacct 37393476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 14920561 - 14920416
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||  |    
T  14920561 aagaaaatctaacgtttttgaattaaaactaacggaaataaccaaaatatgtaacagggagaagttaagggaccaaaataaatcgaattttaattaaatg 14920462  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||||   ||||||||||||||||| ||| |||||||||||||||    
T  14920461 accaaaacaatactacctaaatagttaaggaaccaaaaatgcaatt 14920416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 5416973 - 5417196
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaacctt-caacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||||||  || ||||||||| ||||| ||||||||||||| ||| |||||||||| ||||||||         |||||||||||||| |    
T  5416973 tcctctttttcattttcccatgatctccatcgacctttcaacaacaagaattccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaaat 5417072  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagaga-gaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||||| ||||||||||| |||||||| ||| |||| |||||||||| |||||| |||||| ||||||| ||||| |||||||| |||||||||||||||    
T  5417073 aaaactaacggaaatgaccaaaatgtgcaac-gagaagaagttaaggaaccaaaataaatcaaattttagttaagggaccaaagcgatactacctaaata 5417171  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| |||||||||||||||| ||||    
T  5417172 gttaagggaccaaaaatgcagttta 5417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 28206984 - 28206769
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaacctt-caacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaactta 99  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||| |    
T  28206984 ctcctcttcttcatcttcatatcatctccatcaacctttcaacaacaaaaatccaagaaaaattacataagaaaacctaacgtttttgaattaaaactaa 28206885  T
Q  100 cggaaatgactaaaatgtgtaac-agagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-ggg 197  Q
    |  ||| ||  |||||||||||| | ||| || |||||  |||||| || ||| ||||||||||||| |||||||| ||||||| | ||||||||| |||    
T  28206884 cataaaggatcaaaatgtgtaacgataga-aaattaagataccaaaatacatcaaattttaattaagggaccaaagcgatactagcaaaatagttatggg 28206786  T
Q  198 accaaaaatgcaattta 214  Q
    ||||||||| |||||||    
T  28206785 accaaaaattcaattta 28206769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 9495259 - 9495406
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||||||||||||| |||||| || |||||||||  |    
T  9495259 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgagtaacggagagaagttaagggaccaaaataaatcaaactttaattaacgg 9495358  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||  ||||||| ||||||||| |||||||||||||||||||||    
T  9495359 accaaagcaatactacttaaatagttaagggaccaaaaatgcaattta 9495406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 18018022 - 18018169
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |    
T  18018022 aagaaaacctaacgtttttaaattaaaactaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaattgaattttaattaaggg 18018121  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | |||||  ||||| ||||||||||| |||||||||||||||||||||    
T  18018122 agcaaagcaatacttcctaaatagttaagggaccaaaaatgcaattta 18018169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 30872919 - 30872786
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    ||||| |||||||||| || |||||||| ||||||||| ||| |||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||    
T  30872919 ttttttaattaaaactaacagaaatgaccaaaatgtgttacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcaatact 30872820  T
Q  182 acctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||| |||||||||||||||||||||    
T  30872819 acctaaatagttaagggaccaaaaatgcaattta 30872786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3869175 - 3868947
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc-ataagaaaat----------ctaacgtttttgaa 89  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||  || ||||| ||| | ||||||||          |||| |||||||||    
T  3869175 ctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaattgcaaaaaaaattccagaagaaaatgaaaaaaaacctaatgtttttgaa 3869076  T
Q  90 ttaaaacttacggaaatgactaaaatgt---gtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactaccta 186  Q
    |||||||| || |||| ||| |||||||   ||||| ||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||| ||    
T  3869075 ttaaaactaacagaaaagaccaaaatgtactgtaacggagagaagttaagagactaaaataaatcgaattttaattaagggaccaaagtgatactacata 3868976  T
Q  187 aatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||| ||||| |||||||||    
T  3868975 aatagttaagggatcaaaagtgcaattta 3868947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 11198441 - 11198588
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| | ||||| ||| |||||||||||| |||||||||||||||| |||| |||||| ||||||||||||| |    
T  11198441 aagaaaacctaacgttttttaattaaaactaatggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaattttaattaaggg 11198540  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||  |||||||||| |||||||||||||||||||||    
T  11198541 accaaagcgatactgtctaaatagttaagggaccaaaaatgcaattta 11198588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 18621983 - 18622130
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||| ||  ||||||||||||||| |||||||||||||||||| ||||| |||||||||||||| |    
T  18621983 aagaaaacctaacatttttgaattaaaactaacggaaaagagcaaaatgtgtaacagatagaagttaagggaccaaaataaattgaattttaattaaggg 18622082  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||| |||||||||| || |||||||| |||||||||    
T  18622083 accaaagcgatactatctaaatagttaagagaccaaaagtgcaattta 18622130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 30568498 - 30568331
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatcta---------acgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||  |         |||||||||||||||||    
T  30568498 tctttttcatcttcatatcatctccatcaaccttcaagaacaagaattccagaaaaattccagaagaaaatgaagaaaatatgacgtttttgaattaaaa 30568399  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaatta 163  Q
    |  ||||||||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  30568398 caaacggaaatgaccaaaatgtgtaacaaatagaagttaagggaccaaaataaatcgaattttaatta 30568331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 36344111 - 36343965
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||||| ||| ||||||| |||||||| | |||||||||||||||||| |    
T  36344111 aagaaaatctaacgtttttgaattaaaactaacgaaaaagaccaaaatgtgtaacatagaaaagttaaaggaccaaaattaatcgaattttaattaaggg 36344012  T
Q  168 accaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    |||||| | |||||||||||||| ||| | ||||||||| |||||||    
T  36344011 accaaaataatactacctaaataattaagaaccaaaaatacaattta 36343965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 21515445 - 21515562
Alignment:
Q  77 taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtg 176  Q
    |||||||||||||||||| || ||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |    
T  21515445 taacgtttttgaattaaagctaacggaaatgaccaaaatatgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcg 21515544  T
Q  177 atactacctaaatagtta 194  Q
    ||||||| ||||||||||    
T  21515545 atactacgtaaatagtta 21515562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 26217294 - 26217082
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||  | ||||||||         | ||||||||| |||||    
T  26217294 tcctcattttcattttcatatcatctccatcaaccttcaacaacaagaattccaaaaaaattcaagaagaaaatgaagaaaatccaacgtttttaaatta 26217195  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||| ||| ||| ||||||||| |||| ||||||||||||||| |||||  ||||||||||||  | ||||| ||||||||| ||||||||    
T  26217194 aaactaacggaaaggacgaaa-tgtgtaacaaagaggagttaagggaccaaaataaattaaattttaattaaagggccaaaatgatactacttaaatagt 26217096  T
Q  193 t-agggaccaaaaa 205  Q
    | ||||||||||||    
T  26217095 taagggaccaaaaa 26217082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 8654172 - 8654324
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| |||||||  || |||||||||||| |||||||||||||||| |||| |||||| ||||||||||||  |    
T  8654172 aagaaaacataacgtttttgaattaaaactaacggaaagtaccaaaatgtgtaacggagagaagttaagggagcaaaataaatcaaattttaattaaagg 8654271  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||   ||| ||||||||||||| ||||||||||||||||||||||||||    
T  8654272 accaaaacaatattacctaaatagttaagggaccaaaaatgcaatttaacctt 8654324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 5416962 - 5416815
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| || |||| ||| ||||||||||||||| |||||||||  ||||||| | ||||||||||||||||   |    
T  5416962 aagaaaatctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacagaaagaagttaaaagaccaaaatcaatcgaattttaattagagg 5416863  T
Q  168 accaaagtgatactacctaaatagtta-gggaccaaaaatgcaattta 214  Q
    ||||||  ||||||||||||||||||| |||||||||||| |||||||    
T  5416862 accaaaacgatactacctaaatagttaggggaccaaaaatacaattta 5416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 39912067 - 39911924
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||| | |||| |||||||||||| |||||||| |||| |||||||||||||||||    
T  39912067 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatatataacggagagaagttaaaggaccaaaataaaccgaattttaattaagcg 39911968  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaa 210  Q
    ||||||| |||| || ||||||| || |||||| ||||||||||    
T  39911967 accaaagagataatatctaaataattaagggacaaaaaatgcaa 39911924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 29027210 - 29027343
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    |||||||||||||||||||||||||||| ||| ||    | |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||    
T  29027210 gaaaatctaacgtttttgaattaaaactaacgaaa----ccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggac 29027305  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    ||||  |||||||||||||||||| || ||||||||||    
T  29027306 caaaacgatactacctaaatagttaagagaccaaaaat 29027343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 30568512 - 30568659
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| ||||||||||  |||||||||||| |||| || ||||||||||||| |||||| |||||||| |||| |    
T  30568512 aagaaaacctaatgtttttgaattaaaactaacggaaatgatcaaaatgtgtaacggagaaaaattaagggaccaaaataaatcaaattttaaataaggg 30568611  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  ||||||| |||||||||| ||||||||||||| |||||||    
T  30568612 accaaatcgatactaactaaatagttaagggaccaaaaatacaattta 30568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 32733936 - 32733740
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    |||||||||| || || ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||          |||| |||||||||||    
T  32733936 tcctcttttttatctttataacatctccattaaccttcaacaacaagaatcccagaaaaatttcataagaaaatgaagaaaacataacatttttgaatta 32733837  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    ||| | ||||||| ||  ||||||||||||  | ||||||||| |||||||| |||||| ||||||||||||   |||||||| ||| |||||||||    
T  32733836 aaattaacggaaaggagcaaaatgtgtaacgtatagaagttaaaggaccaaaataaatcaaattttaattaaaaaaccaaagtaatattacctaaat 32733740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 40094713 - 40094857
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||  |||    
T  40094713 gaaaatttaacgtttttgaattaaaactaacggaaatgaccaaaaagtgtaacggagagaagttaagggacaaaaataaatcgaattttaattaaaggac 40094812  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    ||||    |||||  ||||||||| |||||||||||||| |||||    
T  40094813 caaaacagtactaattaaatagttaagggaccaaaaatgtaattt 40094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 7041865 - 7042007
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| |||     ||||| |    
T  7041865 aagaaaacctaacgtttttgaattaaaattaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaat-----ttaaggg 7041959  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||||    
T  7041960 accaaagcgatactatataaatagttaagggaccaaaaatgcaattta 7042007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 35486088 - 35485910
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    ||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||    ||||||| |||||||||||||||||||||| |     
T  35486088 ctcctattcttcatcttcatatcatctccatcaaccttgaacaacaaaaatccgagaaaaattcttgaagaaaacctaacgtttttgaattaaaactaat 35485989  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgata 179  Q
    | ||||||| ||||||| | ||| |||||||||||   |||||| |||| | ||||||||||||| ||| |||| ||||    
T  35485988 gaaaatgaccaaaatgtttgacaaagagaagttaatataccaaaataaaacaaattttaattaagggactaaagcgata 35485910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 1825955 - 1825807
Alignment:
Q  72 aaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacca 171  Q
    ||||||||  |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| | |||| ||||||||||||| || ||    
T  1825955 aaatctaatatttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggactaaaat-aatcaaattttaattaagagatca 1825857  T
Q  172 aagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||  ||| || | ||||||||| ||||||||||||| ||||||| |||||    
T  1825856 aaacgatgctccttaaatagttaagggaccaaaaatacaatttagccttt 1825807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 220
Target Start/End: Complemental strand, 1860400 - 1860252
Alignment:
Q  72 aaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacca 171  Q
    ||||||||  |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| | |||| ||||||||||||| || ||    
T  1860400 aaatctaatatttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggactaaaat-aatcaaattttaattaagagatca 1860302  T
Q  172 aagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||  ||| || | ||||||||| ||||||||||||| ||||||| |||||    
T  1860301 aaacgatgctccttaaatagttaagggaccaaaaatacaatttagccttt 1860252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 16645781 - 16645931
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacaga---gagaagttaagggaccaaagtaaatcgaattttaattaa 164  Q
    ||||||| ||||  |||||||||||||||| | ||||| ||  |||||||||||| ||   |||||||||| |||||||| |||||||||||||||||||    
T  16645781 aagaaaacctaatctttttgaattaaaactaatggaaaggaacaaaatgtgtaactgatgagagaagttaaaggaccaaaataaatcgaattttaattaa 16645880  T
Q  165 gcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | |||||||   ||||||||||||||||| |||||||||||||||||||||    
T  16645881 gggaccaaaacaatactacctaaatagttaagggaccaaaaatgcaattta 16645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 19302347 - 19302510
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacgg 102  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||  |||  ||||||||||||||| | ||    
T  19302347 cctcttcttcatcttcctatcatctccatcaaccttcaacaacaaaaatccaagaaaaatttcagaagaaaatgaaacagttttgaattaaaactaatgg 19302446  T
Q  103 aaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||| ||| |||||||||||| || || ||||||||  |||||| |||||| |  ||||||||||    
T  19302447 aaaagaccaaaatgtgtaaccgatagaaagttaagataccaaaataaatcaatatttaattaag 19302510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 44255098 - 44255224
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||| |||| |||||||||||||||| ||| ||||||| ||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||| |    
T  44255098 aagaaaatgtaacatttttgaattaaaactaacgtaaatgaccaaaatgtgtaacagagataagttaagagaccaaaataaattgaattttaattaaggg 44255197  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    ||||||   || | |||||||||||||    
T  44255198 accaaaacaatcccacctaaatagtta 44255224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 21515426 - 21515324
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |   |||||||||||| ||||||||||||||||| ||    
T  21515426 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaataaaat--aaagaaaatctaatgtttttgaattaaaactaac 21515329  T
Q  101 ggaaa 105  Q
    |||||    
T  21515328 ggaaa 21515324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 26736361 - 26736508
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||| || |||||||||||||||||||| ||||||||||| |||||||||| |  ||||||||||| |||||| | |||||||||||||||||||  |    
T  26736361 aagaaactcaaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtatcgaagagaagttaaaggaccacaataaatcgaattttaattaaagg 26736460  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   |||||| |||||||||| ||||| | |||||| ||||||    
T  26736461 accaaatcaatactatctaaatagttaagggatcgaaaatgtaattta 26736508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 214
Target Start/End: Original strand, 6844695 - 6844823
Alignment:
Q  87 gaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactaccta 186  Q
    ||||||||||| | || || ||| |||||||||||  ||||||||||||||||||||  |||||||| ||||||||||| || ||||| ||| |||||||    
T  6844695 gaattaaaactaatgggaaagaccaaaatgtgtaatggagagaagttaagggaccaagataaatcgatttttaattaagagatcaaagcgatgctaccta 6844794  T
Q  187 aatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| || ||||||||||||||||||    
T  6844795 aatagttaagagaccaaaaatgcaattta 6844823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16645771 - 16645655
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||         ||||||||||||||||    
T  16645771 ctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 16645672  T
Q  92 aaaacttacggaaatga 108  Q
    |||||| ||||||||||    
T  16645671 aaaactaacggaaatga 16645655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 24456815 - 24456731
Alignment:
Q  137 ggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  24456815 ggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagccttt 24456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 40032695 - 40032787
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||| ||||||||| |||||||    
T  40032695 acggaaatgatcaaaatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaagggatcaaaatgatactacataaatag 40032787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 18914407 - 18914320
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaatttt 158  Q
    |||| ||||| |||||||||||||||| || |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||    
T  18914407 aaaacctaacatttttgaattaaaactaactgaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaatttt 18914320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 18621969 - 18621899
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18621969 tctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaat 18621899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 5526019 - 5525881
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| | ||||||| | ||||||| |||  |||| |||| ||||||| ||| |||||| ||||||||||||  |    
T  5526019 aagaaaacctaacgtttttgaattaaaactaaaggaaatggccaaaatgtataa--gagataagtaaagggactaaaataaatcaaattttaattaaagg 5525922  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatg 207  Q
    ||||||  |||||||||||||||||| |||||| |||||||    
T  5525921 accaaatcgatactacctaaatagttaagggactaaaaatg 5525881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 26217305 - 26217410
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| | |||||||||||||||||||| | ||||||||| ||||||||||||  ||||||||||||||  |||| |||||| ||||||||||||| |    
T  26217305 aagaaaaccgaacgtttttgaattaaaactaatggaaatgacgaaaatgtgtaacgaagagaagttaagggtacaaaataaatcaaattttaattaagag 26217404  T
Q  168 accaaa 173  Q
    ||||||    
T  26217405 accaaa 26217410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 33542534 - 33542382
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||||| ||  ||||||| |||||||||||  |||||| ||||||   |||||| ||||||  ||||||||||||     
T  33542534 aagaaaatctaacgtttttgaattaaaactaacaaaaatgaccaaaatgtgtaaggagagag-agttaaaataccaaaataaatcagattttaattaagg 33542436  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||| |||||||  ||||||||| | ||||||||||| ||||||| ||||    
T  33542435 gaccaaagcgatactaattaaatagttaaaggaccaaaaatacaatttagcctt 33542382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33542544 - 33542731
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||||| ||| | ||||||||| || ||||||||         ||||| ||||||||||    
T  33542544 ctcctcttcttcatcttcatatcatatccatcgaccttcaacaacaaaaattcaagaaaaattccagaagaaaatgaagaaaacctaacatttttgaatt 33542643  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgata 179  Q
    |||||| ||  ||| ||| ||||| |||||| |||||||||||||  | |||| |||||| ||||||||||||  |||||||| ||||    
T  33542644 aaaactaacataaaggaccaaaatatgtaacggagagaagttaagaaatcaaaataaatcaaattttaattaaatgaccaaagcgata 33542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 44678428 - 44678515
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaatta 163  Q
    |||||||||||||||||||||| || |||| ||| |||| |||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  44678428 ctaacgtttttgaattaaaactaacagaaaggaccaaaacgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaatta 44678515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 44678408 - 44678320
Alignment:
Q  127 agaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||  |||||| |||||||||||||| ||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  44678408 agaagttaagaaaccaaaataaatcgaattttagttaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 44678320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 12873284 - 12873429
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |   ||||||| |||||||||||  ||||| |||||||  |||||| ||||||  |||||||||||| |    
T  12873284 aagaaaacctaacgtttttgaattaaaactaaaaaaaatgaccaaaatgtgtaa-ggagag-agttaagataccaaaataaatcagattttaattaaggg 12873381  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||  |||||||  ||||||||| ||||||||||||| |||||||    
T  12873382 accaaaacgatactaattaaatagttaagggaccaaaaatacaattta 12873429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 36344127 - 36344350
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaattaaaact 97  Q
    |||||||| |||||||||||||||||||||||| |||||||||||  || ||||| |  | ||||||||          ||| |||||||||| |||| |    
T  36344127 tttttcatcttcatatcatctccatcaaccttccacaacaagaatttcaaaaaaaatctagaagaaaatgaagaaaatttaatgtttttgaatcaaaatt 36344226  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
     | |||| |||| ||||||||| || || | ||||||| ||| |||| |||||| ||||||||||||  ||||||||  ||||||||||||||||| | |    
T  36344227 aaaggaattgaccaaaatgtgtgacggaaataagttaaaggatcaaaataaatcaaattttaattaaaagaccaaagcaatactacctaaatagttaaag 36344326  T
Q  197 gaccaaaaatgcaatttaaccttt 220  Q
    ||  ||||||||||||||| ||||    
T  36344327 gataaaaaatgcaatttaatcttt 36344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 410598 - 410712
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||  ||| ||| ||| ||||||||||| ||||||||| ||||  |||||| |||||| |||||||||||||      
T  410598 aagaaaacctaacgtttttgaattaaaacaaacgaaaaggaccaaaatgtgtaatagagagaaggtaagataccaaaataaatcaaattttaattaagga 410697  T
Q  168 accaaagtgatacta 182  Q
    ||||||  |||||||    
T  410698 accaaaacgatacta 410712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 28206997 - 28207136
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaac-agagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| ||| ||||||| ||||| |||||| | ||| ||||||||  |||||| |||||| ||||||||||||| |  |||||    
T  28206997 ctaacgtttttgaattaaaactaacgtaaatgaccaaaatttgtaacgataga-aagttaagataccaaaataaatcaaattttaattaaggggtcaaag 28207095  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     ||||||| | ||||| || ||||| |||||||||||||||    
T  28207096 cgatactagcaaaataattaagggatcaaaaatgcaattta 28207136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 217
Target Start/End: Original strand, 35486102 - 35486249
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||||||||||||||||||||||||| || |||| ||  | || ||||||  ||||||| ||||||  || ||| |||||  ||||||||||||| |||    
T  35486102 aaaatctaacgtttttgaattaaaactaacagaaaggagcacaaggtgtaag-gagagaaagttaagatactaaaataaattaaattttaattaagggac 35486200  T
Q  170 caaagtgatactacctaaatagtta-gggaccaaaaatgcaatttaacc 217  Q
    ||||| |||||||  |||||||||| ||||||||||||||||| |||||    
T  35486201 caaagcgatactaattaaatagttaggggaccaaaaatgcaatctaacc 35486249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 40040406 - 40040474
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    ||||| |||||||||||||||| | | ||||||| ||||||||||||||||||||||||||||||||||    
T  40040406 ctaacatttttgaattaaaactaatgaaaatgaccaaaatgtgtaacagagagaagttaagggaccaaa 40040474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 410519 - 410405
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||||| |||||  ||||| ||||||||  |||||| |||||| |||||||||||||     
T  410519 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatatgtaaggagaga-aagttaagataccaaaataaatcaaattttaattaaga 410421  T
Q  167 gaccaaagtgatacta 182  Q
    |||||| | |||||||    
T  410420 gaccaacgcgatacta 410405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 11639286 - 11639353
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaa 135  Q
    |||||||||||||||||||||||||||| | ||||||||||| ||||| |||||| ||||||||||||    
T  11639286 aagaaaatctaacgtttttgaattaaaattaacggaaatgaccaaaatatgtaacggagagaagttaa 11639353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 44678518 - 44678595
Alignment:
Q  137 ggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    |||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||| ||| ||||||| |||||||    
T  44678518 ggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaaggaacaaaaatacaattta 44678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 21512519 - 21512416
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    |||||||||| | ||||||||||||||| ||||| |||||| ||||||||||||  ||| |||| |||||| ||||||||||| |||||| |||||| ||    
T  21512519 aaaatgtgtagcggagagaagttaaggggccaaaataaatcaaattttaattaatggactaaagcgatact-cctaaatagttaagggacgaaaaataca 21512421  T
Q  210 attta 214  Q
    |||||    
T  21512420 attta 21512416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 221
Target Start/End: Original strand, 45436426 - 45436552
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagag-aagttaagggacc--aaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    ||||||||||| |||||||||||||||||| |||||||||||||  ||| |||||| || |||| ||||| |||||||  || || |  ||||||||| |    
T  45436426 acggaaatgaccaaaatgtgtaacagagagaaagttaagggacccaaaaataaatcaaaatttagttaagggaccaaaccgaaaccaattaaatagttaa 45436525  T
Q  195 gggaccaaaaatgcaatttaacctttt 221  Q
    ||||| ||||||| |||||| ||||||    
T  45436526 gggacaaaaaatgtaatttagcctttt 45436552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 18623667 - 18623719
Alignment:
Q  110 taaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaatt 162  Q
    ||||||||||||||||||||| |||| | | |||| |||||||||||||||||    
T  18623667 taaaatgtgtaacagagagaaattaaagaagcaaaataaatcgaattttaatt 18623719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 19302325 - 19302274
Alignment:
Q  78 aacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagaga 129  Q
    |||||||||||||||||||| ||| ||| ||| | |||||||||||||||||    
T  19302325 aacgtttttgaattaaaactaacgcaaaagaccacaatgtgtaacagagaga 19302274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 165
Target Start/End: Complemental strand, 29769506 - 29769416
Alignment:
Q  75 tctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaag 165  Q
    |||||||||||| |||||||  | ||||||||||| ||||  ||||||| |||||| |||||||||||||| |||||| || |||| |||||    
T  29769506 tctaacgttttt-aattaaatttaacggaaatgaccaaaacttgtaacaaagagaaagttaagggaccaaaataaatcaaaatttagttaag 29769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 15740755 - 15740618
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaag-ttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||||||||| |||||||  | ||||||| ||||||||   ||||| || ||||  ||||||||||||| |||||| ||||||| ||| | |||||||     
T  15740755 ctaacgttttt-aattaaatttaacggaaaggactaaaagtggtaacggaaagaaacttaagggaccaaaataaatcaaattttagttaggggaccaaac 15740657  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
     |||||||  ||||||||| | |||||||||| ||||||    
T  15740656 cgatactaattaaatagttaatggaccaaaaaggcaatt 15740618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 26217398 - 26217484
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgata----ctacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||| ||||||| |||||| ||||||||||||| |||||||  ||||    |||||||||||||| |||||| ||||||||||||||    
T  26217398 ttaagagaccaaaataaatcaaattttaattaagagaccaaa-cgatactacctacctaaatagttaagggacaaaaaatgcaattta 26217484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 11639379 - 11639424
Alignment:
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||||||||| |||||| |||||||||||||| |||||    
T  11639379 gatactacctaaatagttaagggacgaaaaatgcaatttagccttt 11639424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35223993 - 35223938
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||||||| ||||||||||||||||       ||||||||||||||||| |||||||    
T  35223993 ctcctctttttcatcttcatatcatctccat-------caacaacaagaatcccataaaaatt 35223938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 24605100 - 24604872
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  24605100 ctcctctttttcaacttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 24605001  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  24605000 aaaactaacggaaatgaccaaaacgtgtaacagagagaagt-aagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 24604902  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || |||||||||||||||||||||||||||    
T  24604901 ttaagggaccaaaaatgcaatttaaccttt 24604872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 31029750 - 31029522
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||         ||||||||||||||||    
T  31029750 ctcctctttttcatcctcatatcatctccatcaaccttcaacaacaagaatccgagagaaattccataagaaaatgaagaaaacctaacgtttttgaatt 31029651  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||||||| ||||||||||||  |||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||     
T  31029650 aaaactaacgaaaatgaccaaaatgtgtaacgcagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaataa 31029551  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||| ||||||||||||||||||||    
T  31029550 ttaagggatcaaaaatgcaatttaacctt 31029522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 33329432 - 33329200
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||| |||||||||||         ||||||||||||||||    
T  33329432 ctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatctcaaaaaaattccataagaaaatgaagaaaacctaacgtttttgaatt 33329333  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |  |||| ||| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||||  |||||||||||||||    
T  33329332 aaaactaatagaaaggaccaaaatgtgtaacggggagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcaatactacctaaatag 33329233  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttat 223  Q
    || ||||| ||||||||||||||| ||||||||    
T  33329232 ttaagggatcaaaaatgcaatttagccttttat 33329200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 29010180 - 29009948
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| || ||||||||         ||||||||||||||||    
T  29010180 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcatagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 29010081  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||| | |||||||||||||||||| || ||| |||||||||||||||| |||||||| |||||||| |||||||    
T  29010080 aaaactaacggaaaggaccaaaatgtgtagcggagagaagttaagggaccgaaataattcgaattttaattaagggaccaaagcgatactacgtaaatag 29009981  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttat 223  Q
    || ||||||||||||| |||||||  |||||||    
T  29009980 ttaagggaccaaaaattcaatttagtcttttat 29009948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 6220216 - 6220439
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||         ||||||||||||||||    
T  6220216 ctcctctttttcatcttcatatcatctccatcaacctttaacaacaagaatcctcgaaaaattccataagaaaatgaagaaaacctaacgtttttgaatt 6220315  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| |||||||||| |  |||||||| ||||||||||||||||    
T  6220316 aaaactaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattgatggaccaaagcgatactacctaaatag 6220415  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||  ||||||||||||||    
T  6220416 ttaagggattaaaaatgcaattta 6220439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 33544982 - 33545184
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||| ||||| |||||||||||| ||||||||         ||||||||||||||||    
T  33544982 ctcctctttttcatcttcatatcatctccgtcaagcttcaacaacaaaaatcctagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttgaatt 33545081  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  33545082 aaaactaacggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagtgatactacctaaatag 33545181  T
Q  192 tta 194  Q
    |||    
T  33545182 tta 33545184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 3289147 - 3288933
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         |||||||||||||||||||||| ||    
T  3289147 ttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaaaaaaacctaacgtttttgaattaaaactaac 3289048  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
     |||| ||  |||||||||||  ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||    
T  3289047 agaaaggatcaaaatgtgtaatggagagaagttaggggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaagggac 3288948  T
Q  200 caaaaatgcaattta 214  Q
    || ||||||||||||    
T  3288947 cataaatgcaattta 3288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 14337063 - 14337296
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatta 92  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||| | ||||||||| || ||||         |||||||||||||||||||||    
T  14337063 tcctctttttcatcttcatatcatctccatcaatcttcaataacaagaattcgagaaaaattccagaagaaaatgaagaaaatctaacgtttttgaatta 14337162  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||| | ||||||| ||| |||||||||||| || |||| ||||||||||||| |||||| |||||||| |||| ||||||||||||||||||||||||||    
T  14337163 aaattaacggaaaagaccaaaatgtgtaacggaaagaatttaagggaccaaaataaatcaaattttaactaagggaccaaagtgatactacctaaatagt 14337262  T
Q  193 tagggaccaaaaatgcaatttaaccttttatttt 226  Q
    || ||   |||||||||||||| |||||| ||||    
T  14337263 taagggataaaaatgcaatttagccttttttttt 14337296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 3338703 - 3338480
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaatt 91  Q
    |||||||||||||  ||||||| |||||| |||| |||||||||||| | ||||||||||||| ||  |||||||          |||||||||||||||    
T  3338703 ctcctctttttcaccttcatattatctccgtcaagcttcaacaacaaaattcccagaaaaattccaatagaaaatgaagaaaacgtaacgtttttgaatt 3338604  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||  ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  3338603 aaaactaacggaaatgagcaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 3338504  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||| ||||||||||||||    
T  3338503 ttaagggacaaaaaatgcaattta 3338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 33544972 - 33544813
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |    
T  33544972 aagaaaacctaacctttttgaattaaaactaacggaaatgaccaaaatgtgtaacagatagaagttaaaggaccaaaataaatcgaattttaattaaggg 33544873  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    |||||||  ||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  33544872 accaaagcaatactacttaaatagttaagggaccaaaaatgcaatttaaccttttttttt 33544813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 1158817 - 1158593
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaacct-tcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaat 90  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||| || || ||||||||         |||||||||||||||    
T  1158817 ctcctctttttcatcttcatatcatctccatcaacccgtcaacaacaagaatcccagaaaagttccaaaagaaaatgaagaaaatctaacgtttttgaat 1158718  T
Q  91 taaaacttac--ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaa 188  Q
    ||||||| ||  ||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||| |||||||||||||    
T  1158717 taaaactaacacggaaaggaccaacatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaa 1158618  T
Q  189 tagtt-agggaccaaaaatgcaatt 212  Q
    ||||| | |||||||||||| ||||    
T  1158617 tagttaaaggaccaaaaatgtaatt 1158593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 33972366 - 33972547
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatcta---------acgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||  |         |||||||||||||    
T  33972366 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagattcccagaaaaattccagaagaaaatgaagaaaattcaacgtttttgaatt 33972465  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||    
T  33972466 aaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaattgaattttaattaagggaccaaa 33972547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 11524926 - 11525153
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||| || ||||||||         ||||||||||| ||||    
T  11524926 ctcctctttttcatcttcatatcatctccattgaccttcaacaacaagaatcccataaaaattccagaagaaaatgaagaaaacctaacgttttttaatt 11525025  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||||| ||  |||||||| ||||||| ||||| ||||||||| |||| |||||||  |||||||||||||| |    
T  11525026 aaaactaacggaaatgaccaaaatgtgtaaca-aggaaagttaagagaccaaaataaattgaattttaaataagggaccaaaccgatactacctaaattg 11525124  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||||||||||||||||||| ||||    
T  11525125 ttaagggaccaaaaatgcaatttagcctt 11525153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 219
Target Start/End: Complemental strand, 25551552 - 25551345
Alignment:
Q  22 tcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaattaaaacttacggaaatgactaa 112  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| ||||||||          ||| ||||||||||||||||| ||||||| ||| ||    
T  25551552 tcatctccatcaaccttcaacagcaagaatcccagcaaaatttcacaagaaaatgaagaaaacataatgtttttgaattaaaactaacggaaaggaccaa 25551453  T
Q  113 aatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaat 211  Q
    ||||||||||||||| |||||||||||| ||| |||||| ||||| ||||||| ||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  25551452 aatgtgtaacagagaaaagttaagggactaaaataaatcaaatttcaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatacaat 25551353  T
Q  212 ttaacctt 219  Q
    ||| ||||    
T  25551352 ttagcctt 25551345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 13156065 - 13155836
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||         ||||||  ||||||||    
T  13156065 ctcctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatctcagaaaaattccaaaagaaaatgaagaaaacctaacgaatttgaatt 13155966  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||  |||||||||   |||||||||||| || |||||||||| ||| ||| |||||||||||||||||||| |||||||  ||||||||||||||||    
T  13155965 aaaacaaacggaaatggtcaaaatgtgtaacggaaagaagttaagcgactaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatag 13155866  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || || ||||||||||  |||||| |||||    
T  13155865 ttaagagaccaaaaatataatttatccttt 13155836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 13160921 - 13160692
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||| || ||||||||         ||||||  ||||||||    
T  13160921 ctcctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatctcagaaaaattccaaaagaaaatgaagaaaacctaacgaatttgaatt 13160822  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||  |||||||||   |||||||||||| || |||||||||| ||| ||| |||||||||||||||||||| |||||||  ||||||||||||||||    
T  13160821 aaaacaaacggaaatggtcaaaatgtgtaacggaaagaagttaagcgactaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatag 13160722  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || || ||||||||||  |||||| |||||    
T  13160721 ttaagagaccaaaaatataatttatccttt 13160692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 25551572 - 25551726
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| |||  |||||||||||  |||||||||||||||||||| |||||||||||||||||| | |    
T  25551572 aagaaaacctaacgtttttgaattaaaactaacagaaaggacctaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattagggg 25551671  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  25551672 accaaagcgatactacttaaatagttaagggaccaaaaatacaatttaacctttt 25551726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 24605110 - 24605254
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |    
T  24605110 aagaaaacctaatgtttttgaattaaaactaacgaaaatgac-aaaatgtgtaacagagagaagttaagggatcaaaataaatcgaattttaattaaggg 24605208  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||||  |||||||||||||||||| |||||||||||||| ||||    
T  24605209 accaaatcgatactacctaaatagttaagggaccaaaaatgtaatt 24605254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 3289146 - 3289293
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || ||||  || |||||||||||| ||||||||||||||||||||| |||||| |||||||||||||      
T  3289146 aagaaaacctaacgtttttgaattaaaactaacagaaaacaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggc 3289245  T
Q  168 accaaagtgatactacctaaatag-ttagggaccaaaaatgcaattta 214  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  3289246 accaaagcgatattacctaaatagtttagggaccaaaaatgcaattta 3289293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 29999573 - 29999765
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||| ||||| ||| ||||||||||||||| ||| |||||||| ||||| || ||||||||| ||||||||||||  |||||||||||||| | ||    
T  29999573 ctcctcttcttcatcttcgtatcatctccatcaatctttaacaacaaaaatccgaggaaaatttcagaagaaaatctaat-tttttgaattaaaagtaac 29999671  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
     |||| ||||||||||||||||||| ||||||||||  |||||| |||||| ||||||||||| | ||| |||| |||||||  ||||||||||    
T  29999672 agaaaggactaaaatgtgtaacagatagaagttaagataccaaaataaatcaaattttaattacgggactaaagcgatactaattaaatagtta 29999765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 35132751 - 35132599
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||  |||||||| |||||||||||||||| |||||||| |||||| ||||||||||| | |    
T  35132751 aagaaaacctaacgtttttgaattaaaactaacagaaaggatcaaaatgtgcaacagagagaagttaaaggaccaaaataaatctaattttaattatggg 35132652  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||| ||||    
T  35132651 accaaagcgatactacctaaatagttaatggaccaaaaatgcaatttagcctt 35132599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 1860722 - 1860868
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||| ||| ||||||||||| ||||||||||||  ||||||||||||| ||| || |||||||||||||||||||| |    
T  1860722 aagaaaacttaacgtttttgaattaagactaacggaaatgaccaaaatgtgtaacgaagagaagttaaggaacccaaataaatcgaattttaattaaggg 1860821  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  1860822 accaaagagatac-acctaaatagttaagggaccaaaaatgcaattta 1860868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 14337052 - 14336905
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||  |    
T  14337052 aagaaaacctaacgtttttgaattaaaactaacggaaaagaccaaaatgtataacaaagagaagttaaaggaccaaaataaatcgaattttaattaaagg 14336953  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||| ||||||| || ||||| |||||||||||||||    
T  14336952 accaaagcgatactagctaaataattaagggatcaaaaatgcaattta 14336905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 76 - 194
Target Start/End: Complemental strand, 33346620 - 33346502
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||| | ||||||| ||  |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  33346620 ctaacgtttttgaattaaaattaacggaaaggatcaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagc 33346521  T
Q  176 gatactacctaaatagtta 194  Q
    |||||||||||||||||||    
T  33346520 gatactacctaaatagtta 33346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 70 - 214
Target Start/End: Complemental strand, 9174049 - 9173904
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||||||||||||||||||||| ||  ||| ||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||   |||    
T  9174049 gaaaacctaacgtttttgaattaaaactaacataaaggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagaggac 9173950  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||| |||||||||||||||||| ||||||||||||| |||||||    
T  9173949 caaagcgatactacctaaatagttaagggaccaaaaatacaattta 9173904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 2949452 - 2949632
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||  | ||||||||         |||||||| ||||||||    
T  2949452 tcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcctagaaaaattctagaagaaaatgaagaaaacctaacgttgttgaatta 2949551  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||| ||   || ||| |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||    
T  2949552 aaactaaccataaggaccaaaatgtgtaacagagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaa 2949632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 12903371 - 12903224
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||  |||| |||||||||||||||| ||||| |||||||||||||| |    
T  12903371 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaatggagataagttaagggaccaaaataaattgaattttaattaaggg 12903272  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||| ||||||| || | | ||||||||| |||||||    
T  12903271 accaaagcgatactatctaaataattaaagaaccaaaaatacaattta 12903224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 6220204 - 6220058
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    |||||| |||||||||||||| |||||| ||||||| ||| |||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||    
T  6220204 gaaaatttaacgtttttgaatgaaaactaacggaaaggaccaaaatgtgtaacagggagaagttaagggaccaaaataaatcaaattttaattaagagac 6220105  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaa 215  Q
     |||| |||| ||  ||||||||| ||||||||||||| ||||||||    
T  6220104 gaaagcgatattaattaaatagttaagggaccaaaaatacaatttaa 6220058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 204
Target Start/End: Complemental strand, 11524916 - 11524778
Alignment:
Q  68 aagaaaatctaacgttttt-gaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||||||||| ||||| ||||||||||  || |||| |||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||||||     
T  11524916 aagaaaatctaacattttttgaattaaaaccaacagaaaggactaaaatgtgtaacggagagaggttaagggaccaaaataaattgaattttaattaagg 11524817  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaa 204  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  11524816 gaccaaagcgatactacctaaatagttaagggaccaaaa 11524778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 24548477 - 24548615
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||||  ||||||||||||  |||||| |||||| ||||||||||||  |    
T  24548477 aagaaaatctaacgtttttgaattaaaactaacgaaaaggaccaaaatgtgtaactcagagaagttaagataccaaaataaatcaaattttaattaaagg 24548576  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaa 205  Q
    |||||||||||||||  ||||||||| ||||||||||||    
T  24548577 accaaagtgatactaattaaatagttaagggaccaaaaa 24548615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 35119055 - 35119173
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||| | || |||| ||| |||||||||||| ||||||| |||| |||||||| |||||||||||||||||||| ||||||||     
T  35119055 ctaacgtttttgaattaaaattaacagaaaggaccaaaatgtgtaacggagagaaattaatggaccaaaataaatcgaattttaattaagggaccaaagc 35119154  T
Q  176 gatactacctaaatagtta 194  Q
    |||||||||||||||||||    
T  35119155 gatactacctaaatagtta 35119173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35132761 - 35132982
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| | |||||||| || ||||||||         ||||||||||||||||    
T  35132761 ctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatctctgaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaatt 35132860  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |  |||| ||| ||||||| |||| ||||||||||||||||||||| ||           ||||||| |||||||| | ||||||||||||||    
T  35132861 aaaactaatagaaaggaccaaaatgtataacggagagaagttaagggaccaaaata-----------aattaagggaccaaagcggtactacctaaatag 35132949  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttat 223  Q
    || ||||||| ||||| ||||||| ||||||||    
T  35132950 ttaagggaccgaaaatacaatttagccttttat 35132982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 2949441 - 2949299
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||||||||||||||   ||||| ||| |||||||||||||     ||||||| |||||||| |||||||||||||||||||| |    
T  2949441 aagaaaacctaacgtttttgaattaaaactactggaaaggaccaaaatgtgtaaca-----aagttaatggaccaaaataaatcgaattttaattaaggg 2949347  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||| ||||||||| | |||| ||||||||||||||    
T  2949346 accaaagtgatactacttaaatagttaacggacaaaaaatgcaattta 2949299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 19135682 - 19135829
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| | ||||||||| |||||||||| | ||||| ||| || ||||||||| ||||||||||||| ||||||| |||||||||||||||||||| |    
T  19135682 aagaaaaccgaacgttttttaattaaaactaatggaaaggaccaacatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaattaagag 19135781  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||  ||||||||||||||| || | |||||||||||||||||||    
T  19135782 atcaaaacgatactacctaaatacttaatggaccaaaaatgcaattta 19135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 12903447 - 12903569
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||||| | || |||||||||||||| | |||| ||| |||||||||||||||  |    
T  12903447 aagaaaatctaacatttttgaattaaaactaacggaaaggactaaaatgtattacggagagaagttaaggaatcaaaataattcgaattttaattaaagg 12903546  T
Q  168 accaaagtgatactacctaaata 190  Q
    ||||||| |||||||||||||||    
T  12903547 accaaagggatactacctaaata 12903569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 13156075 - 13156220
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||  ||| || |||||||| |||| |||||||||||||||||||| |    
T  13156075 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatatgtaacgaagaaaaattaagggatcaaaataaatcgaattttaattaaggg 13156174  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||     ||||||||||||||||| |||||| ||||||| |||||||||    
T  13156175 acca-----atactacctaaatagttaagggacaaaaaatgtaatttaacc 13156220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 13160931 - 13161076
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||  ||| || |||||||| |||| |||||||||||||||||||| |    
T  13160931 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatatgtaacgaagaaaaattaagggatcaaaataaatcgaattttaattaaggg 13161030  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||     ||||||||||||||||| |||||| ||||||| |||||||||    
T  13161031 acca-----atactacctaaatagttaagggacaaaaaatgtaatttaacc 13161076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 7537841 - 7537989
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| || |||| ||| |||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||| |    
T  7537841 aagaaaacctaatgtttttgaattaaaactaacagaaaggaccaaaatgtgtaaccgagagaagttatgggaccaaaataaatcaaattttaattaaggg 7537940  T
Q  168 accaaagtgatactacctaaatagtt-agggac-caaaaatgcaattta 214  Q
    || |||| ||||| || ||||||||| ||||||  ||||||||||||||    
T  7537941 acaaaagcgataccacttaaatagttaagggacaaaaaaatgcaattta 7537989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17544613 - 17544839
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |  ||||||||         |||| |||||||||||    
T  17544613 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccaagaaaaattactgaagaaaatgaagaaaacctaatgtttttgaatt 17544712  T
Q  92 aaaacttacggaaatgactaaaatgtgtaac-agagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||||| || |||| ||  ||||| |||||| | ||| || | |||  |||||| |||||| ||||||||||||| ||||||||||||| || | |||||    
T  17544713 aaaactaacagaaaggatcaaaatatgtaacgataga-aaatcaagataccaaaataaatcaaattttaattaagggaccaaagtgatattagcaaaata 17544811  T
Q  191 gttagggaccaaaaatgcaatttaacct 218  Q
    |||| ||  |||||||||||||||||||    
T  17544812 gttacgggacaaaaatgcaatttaacct 17544839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 31029760 - 31029907
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||||||  ||||||||||||||||| ||| ||| |||||||| |||||||||||||| ||||| |    
T  31029760 aagaaaacctaacgtttttgaattaaaactaacagaaatgatcaaaatgtgtaacagagaaaagataaaggaccaaaataaatcgaattttagttaaggg 31029859  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || |||   ||||||  ||||| ||| |||||||||||||||||||||    
T  31029860 actaaaacaatactatttaaatggttaagggaccaaaaatgcaattta 31029907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 35119044 - 35118974
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35119044 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcataagaaaat 35118974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 1158837 - 1158968
Alignment:
Q  78 aacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtga 177  Q
    |||||||||||||||||||| ||| ||||||| ||||||| |||| |||| || ||||||||||||| |||||| || |||||||||| |||||||| ||    
T  1158837 aacgtttttgaattaaaactaacgaaaatgaccaaaatgtataacggagataa-ttaagggaccaaaataaatc-aaatttaattaagggaccaaagcga 1158934  T
Q  178 tactacctaaatagtt-agggaccaaaaatgcaa 210  Q
    |||||| ||||||||| ||| |||||||||||||    
T  1158935 tactacttaaatagttaaggtaccaaaaatgcaa 1158968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 3338713 - 3338850
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||| ||||||||||| ||| ||  ||| ||||||||||||||| ||||||||| | |||||| |||||||||||||||||||| |    
T  3338713 aagaaaacctaaccttttcgaattaaaactaacgaaa--gaccaaaatgtgtaacagatagaagttaaagaaccaaaataaatcgaattttaattaaggg 3338810  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    | ||||  |||||||| ||||||||| |||||||||||||    
T  3338811 atcaaaacgatactacttaaatagttaagggaccaaaaat 3338850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 33346631 - 33346701
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33346631 tctttttcatcttcatatcatttccatcaaccttcaacaacaagaatcccataaaaatttcataagaaaat 33346701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 29010190 - 29010343
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||| | || |||  ||| |||||||||||  ||  ||||||||||| ||||| |||||||||||||| ||||| |    
T  29010190 aagaaaacctaatgtttttgaattaaaattaacagaatggaccaaaatgtgtaatggatggaagttaaggggccaaaataaatcgaattttagttaaggg 29010289  T
Q  168 accaaagtgatactacctaaatagt-tagggaccaaaaatgcaatttaaccttt 220  Q
    |||| || |||||||| ||||||||  ||| ||||||||||||||||| |||||    
T  29010290 accacagcgatactacataaatagtcaaggaaccaaaaatgcaatttagccttt 29010343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 24548391 - 24548244
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||  ||||| ||||||||  |||||| |||||| |||||||| ||||     
T  24548391 aagaaaatctaacgtttttgaattaaaactaacgaaaaggaccaaaatgtgtaaggagaga-aagttaagataccaaaataaatcaaattttaactaagg 24548293  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
      | |||| |||||||  ||||||||| |||||||||||||||||||||    
T  24548292 ctcaaaagcgatactaattaaatagttaagggaccaaaaatgcaattta 24548244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 32283133 - 32283037
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    |||||||||||| |||||||||||||  |||||| |||||| ||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||    
T  32283133 aaaatgtgtaacggagagaagttaagataccaaaataaatcaaattttaattaagggaccaaagtgatactaattaaatagttaagggaccaaaaat 32283037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 2315729 - 2315603
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| | |||||||||||||||||||| ||||||| ||| ||||| |||||  ||||||| ||||||  |||||| |||||| ||||||||||||||    
T  2315729 aagaaaaccaaacgtttttgaattaaaactaacggaaaggaccaaaatatgtaag-gagagaaagttaagataccaaaataaatcaaattttaattaagc 2315631  T
Q  167 gaccaaagtgatactacctaaatagtta 194  Q
    |||||||| |||||||  ||||||||||    
T  2315630 gaccaaagcgatactaattaaatagtta 2315603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 2814560 - 2814673
Alignment:
Q  81 gtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatac 180  Q
    ||||||||||||||||| |||||||  |  ||||||||||||||||||||||||||  |||||| |||||| ||||||||||||   ||||||| |||||    
T  2814560 gtttttgaattaaaactaacggaaagaatcaaaatgtgtaacagagagaagttaagaaaccaaaataaatcaaattttaattaaagaaccaaagcgatac 2814659  T
Q  181 tacctaaatagtta 194  Q
    ||  ||||||||||    
T  2814660 taattaaatagtta 2814673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 214
Target Start/End: Complemental strand, 11524793 - 11524708
Alignment:
Q  130 agttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||| | ||||||||||| |||||||    
T  11524793 agttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaaaggaccaaaaatacaattta 11524708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 33972344 - 33972260
Alignment:
Q  78 aacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaaggg-accaaagtaaatcgaattttaat 161  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||| |  ||| ||||||||||||||||    
T  33972344 aacgtttttgaattaaaactaacggaaaggactaaaatgtgtaacagagagaaattatgggaaaaaaaataaatcgaattttaat 33972260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 31754368 - 31754426
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  31754368 tctttttcatcttcatatcatctctatcaaccttcaacaataagaatcccagaaaaatt 31754426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 220
Target Start/End: Original strand, 17245590 - 17245713
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
    ||||||| ||||||||   ||||||||||||| || ||||||||||| |||||| ||||||| ||| | |||||||  |||||||  |||||| || |||    
T  17245590 acggaaaagactaaaagtagtaacagagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaataattaagg 17245689  T
Q  197 gaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||||||||| |||||    
T  17245690 gaccaaaaatgcaatttagccttt 17245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 31754354 - 31754249
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| | ||||| | | |||||  ||||| ||||||||||||| ||  ||| ||||| |||||||||||||| |    
T  31754354 aagaaaacataacgtttttgaattaaaactaatggaaaggtccaaaataagtaacggagagaagttaagagattaaaataaatagaattttaattaagag 31754255  T
Q  168 accaaa 173  Q
    ||||||    
T  31754254 accaaa 31754249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 33329441 - 33329514
Alignment:
Q  67 taagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggac 140  Q
    |||||||| |||||||||||||||||||||| || |||| ||  |||||||| |||||||||||||||| ||||    
T  33329441 taagaaaacctaacgtttttgaattaaaactaacagaaaggatcaaaatgtgcaacagagagaagttaaaggac 33329514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 2315732 - 2315802
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||| ||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||| || ||||||||    
T  2315732 tcttcttcatcttcatatcatctcaatcaaccttcaacaacaaaaatcaaagaaaaattccagaagaaaat 2315802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 17544603 - 17544454
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaag-ttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||| |||||| || |||||| |||||| ||| ||| || ||||||||||||| || ||||  |||||  || ||| |||||| ||||||||||||      
T  17544603 aagaaactctaacattcttgaatcaaaactaacgtaaaggattaaaatgtgtaac-gatagaaaattaagatactaaaataaatcaaattttaattaaag 17544505  T
Q  167 gaccaaagtgatactacctaaatagttagggaccaaaaatgcaatttaacc 217  Q
    |||||||| |||| || | ||||||||| ||  ||||||||||||||||||    
T  17544504 gaccaaagcgatattagcaaaatagttaagggacaaaaatgcaatttaacc 17544454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 6229653 - 6229769
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
    ||||||| ||||||||   ||||||||||||| || ||||||||||| |||||| ||||||| || || |||||||  |||||||  ||||||||| |||    
T  6229653 acggaaaggactaaaagtagtaacagagagaaatttaagggaccaaaataaatcaaattttagtt-agggaccaaaccgatactaattaaatagttaagg 6229751  T
Q  197 gaccaaaaatgcaattta 214  Q
    ||||||||| ||||||||    
T  6229752 gaccaaaaaggcaattta 6229769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 220
Target Start/End: Original strand, 33548173 - 33548246
Alignment:
Q  148 aatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||| ||||||||||||| | |||||| |||||||||||||||||| |||||| |||||| ||||||| |||||    
T  33548173 aatcaaattttaattaaggggccaaagcgatactacctaaatagttaagggactaaaaattcaatttagccttt 33548246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 33971969 - 33971925
Alignment:
Q  177 atactacctaaatagtta-gggaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  33971969 atactacctaaatagttaagggaccaaaaatgcaatttaaccttt 33971925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 182
Target Start/End: Complemental strand, 7162479 - 7162399
Alignment:
Q  103 aaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    ||||||| |||||||| ||| ||||||| ||||||  |||||| |||||| ||||||||||||| ||| |||| |||||||    
T  7162479 aaatgaccaaaatgtgcaacggagagaaagttaagataccaaaataaatcaaattttaattaagggactaaagcgatacta 7162399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 29467200 - 29467251
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagaga 127  Q
    |||| ||||||||||||||  | ||||||||||||||||| |||||||||||    
T  29467200 ctaatgtttttgaattaaatttaacggaaatgactaaaatatgtaacagaga 29467251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24548401 - 24548463
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||| | ||||| |||| ||||||||| ||||||||||||||||| ||| | |||||||||    
T  24548401 ctcctcctcttcatcttcacatcatctccgtcaaccttcaacaacaaaaattcgagaaaaatt 24548463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 29999563 - 29999510
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa 121  Q
    ||||||| ||||||||||| |||||||||| ||| ||||||| ||||| |||||    
T  29999563 aagaaaacctaacgttttttaattaaaactaacgaaaatgaccaaaatatgtaa 29999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 47250717 - 47250935
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||||||||| |||||    | ||||||| ||||| |||||||||||||||| ||    
T  47250717 ctcctctttttcatctttatatcatctccatcaacattcaacaacaagaatcccaaaaaaaga--agaagaaaacctaacatttttgaattaaaactaac 47250814  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  47250815 ggaaatgaccaaaatatgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaatagttaagggac 47250914  T
Q  200 caaaaatgcaatttaaccttt 220  Q
    ||||||||||||||| |||||    
T  47250915 caaaaatgcaatttagccttt 47250935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 8769442 - 8769665
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |        || |||||||| |||||||||||||||    
T  8769442 ctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccagaaaaattcctgaagaaaatgaagaaaatataacgtttttgaatt 8769541  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  8769542 aaaactaacggaaaggaccaaaatgtgtaacagagagatgttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatag 8769641  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||| ||||||||||||||    
T  8769642 ttaagggactaaaaatgcaattta 8769665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 10625243 - 10625472
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataa----------gaaaatctaacgtttttgaat 90  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||          |||||  ||||||||||||||    
T  10625243 ctccactttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaaaaaaaatgaagaaaacgtaacgtttttgaat 10625342  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| || |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||  ||||||| ||||||||||||||||    
T  10625343 taaaactaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaaatgatactacctaaata 10625442  T
Q  191 gtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||| ||||||||||||||||||||| ||||    
T  10625443 gttaagggaccaaaaatgcaatttagcctt 10625472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34568809 - 34568586
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||         ||||| ||||||||||    
T  34568809 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccaggaaaattccagaagaaaatgaagaaaacctaacatttttgaatt 34568710  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||| ||| ||||||||||||  ||||||||||||||| |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  34568709 aaaactaacgaaaaggaccaaaatgtgtaacgaagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 34568610  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || | |||| |||||| |||||||    
T  34568609 ttaaaggacaaaaaatacaattta 34568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 47251057 - 47251285
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataa---------gaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||         |||||  |||||||||||||||    
T  47251057 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccaaaaaaagaagaagaaaacataacgtttttgaatt 47251156  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||| |||| |||||||||||||||| |||||  ||||||||||||| ||||||||  |||||||||||||||    
T  47251157 aaaactaacggaaatgaccaaaatgtgtaac-gagaaaagttaagggaccaaaataaattaaattttaattaagagaccaaagcaatactacctaaatag 47251255  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || |||||| |||||||||||||| |||||    
T  47251256 ttaagggacaaaaaatgcaatttagccttt 47251285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 23437378 - 23437155
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| || ||||||||         ||||||||||||||||    
T  23437378 ctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccaaaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 23437279  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||| ||| ||||| |||||| |||||| ||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  23437278 aaaactaatggaaaggaccaaaatatgtaaccgagagaggttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 23437179  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||| | |||||||||||||||    
T  23437178 ttaaggaatcaaaaatgcaattta 23437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 32706958 - 32706735
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| || ||| ||||         ||||||||||||||||    
T  32706958 ctcctctttttcatcttcatatcatgtccatcaaccttcaacaacaagaattccagaaaaattccaaaagcaaatgaagaaaacctaacgtttttgaatt 32706859  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    | |||| ||||||| |||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||| | | |||   |||||||||||||||    
T  32706858 agaactaacggaaaggactaaaatgtgtaattgagagaagttaaggaaccaaaataaatcgaattttaattaagggtcaaaaacaatactacctaaatag 32706759  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  32706758 ttaagggaccaaaaatgcaattta 32706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 44448139 - 44447917
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||         ||||||||||||||||    
T  44448139 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaattccaaaagaaaatgaagaaagtctaacgtttttgaatt 44448040  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||||| | ||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||| |||||||   |||||| ||||||||    
T  44448039 aaaactaacagaaatggccaaaatgtgtaaaagagaaaagttaagggaccaaaataaatcaaattttaattaag-gaccaaaacaatactatctaaatag 44447941  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || | |||||||||||||||||||    
T  44447940 ttaacggaccaaaaatgcaattta 44447917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 9034482 - 9034698
Alignment:
Q  8 ttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaattaaaactt 98  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| || ||||         ||||||||||||||||| ||||||||     
T  9034482 ttttcatcttcatatcatctccatcaatcttcaacaacaataatcccagaaaaattccaaaagaaaatgaagaaaatctaacgtttttgatttaaaacta 9034581  T
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    ||| ||| ||| ||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| | ||    
T  9034582 acgaaaaggaccaaaatctgtaacagagggaagttaagggaccaaaataaatcaaattttaattaagagaccaaagcgatactacctaaatagttaaagg 9034681  T
Q  198 accaaaaatgcaattta 214  Q
    ||||||||| |||||||    
T  9034682 accaaaaatacaattta 9034698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 31715841 - 31715636
Alignment:
Q  8 ttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatg 107  Q
    ||||||| ||||||||||||||||||| ||||||||| || |||||||||| ||  | |  |||||| |||||||||||||||||||||| |||||||||    
T  31715841 ttttcatcttcatatcatctccatcaatcttcaacaaaaataatcccagaagaaaatga--agaaaacctaacgtttttgaattaaaactaacggaaatg 31715744  T
Q  108 actaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    || ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| |  ||||| |||||||||||||||||| || ||| ||||||    
T  31715743 accaaaatctgtaacagagaaaagttaagggaccaaaataaatcgaattttaattaaggggtcaaagcgatactacctaaatagttaagagacaaaaaat 31715644  T
Q  207 gcaattta 214  Q
     |||||||    
T  31715643 acaattta 31715636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 473357 - 473542
Alignment:
Q  9 tttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaaatga 108  Q
    |||||| |||||||||| ||||||||| ||||||||||| ||||| |||| ||||  | ||||||| |||||||||||||||||||||| ||||||| ||    
T  473357 tttcatcttcatatcatttccatcaactttcaacaacaataatcctagaagaattcgagaagaaaacctaacgtttttgaattaaaactaacggaaagga 473456  T
Q  109 ctaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    | |||||||||||  ||||||||||||||||| ||| |||||| ||||||||||||  |||||||| |||||||||||||||||||    
T  473457 ccaaaatgtgtaattgagagaagttaagggacgaaaataaatcaaattttaattaaaagaccaaagcgatactacctaaatagtta 473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 21522444 - 21522226
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | || ||||||||         ||||||||||||||||    
T  21522444 ctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaactccagaagaaaatgaagaaaacctaacgtttttgaatt 21522345  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | || |||| ||| ||||| |||||||||||||||||||| ||||||| ||||  |||||||||||||| |||||||| |||||||||||||||     
T  21522344 aaaattaacagaaaagaccaaaatatgtaacagagagaagttaagagaccaaaataaa--gaattttaattaagggaccaaagcgatactacctaaataa 21522247  T
Q  192 tt-agggaccaaaaatgcaat 211  Q
    || ||||||||||||||||||    
T  21522246 ttaagggaccaaaaatgcaat 21522226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 11678925 - 11678699
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||  |||| |||||||||||| ||||| ||||||||| || ||||||||         ||||||||||||||||||||    
T  11678925 tctttttcatcttcatatcatctctgtcaagcttcaacaacaaaaatcctagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaattaaaa 11678826  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || || |||| ||| ||||||| ||||  |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || ||||||| || |    
T  11678825 ctaacagaaaggaccaaaatgtataacgaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagtgatattatctaaatatttaa 11678726  T
Q  195 gggaccaaaaatgcaatttaacctttt 221  Q
     ||||||||||||||||||| ||||||    
T  11678725 aggaccaaaaatgcaatttagcctttt 11678699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 31715858 - 31716010
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||  |||||||| |||||| ||||||||||||| |    
T  31715858 aagaaaatctaacgtttttgaattaaaactaacg-aaatgaccaaaatgtgtaacggagagaagttataggaccaaaataaatcaaattttaattaaggg 31715956  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| |||||    
T  31715957 accaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagccttt 31716010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 18731169 - 18731022
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||  ||| |||||||||||||||| |||||||||||||||||||| |    
T  18731169 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacgaagataagttaagggaccaaaataaatcgaattttaattaaggg 18731070  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||| ||||||| |||||||||| |||||||||||||||||||||    
T  18731069 atcaaagcgatactatctaaatagttaagggaccaaaaatgcaattta 18731022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 23472792 - 23472939
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| ||||||||||| | |||||||||||||||||||| |||||||||||||||||||| |    
T  23472792 aagaaaacctaacgtttttaaattaaaactaacggaaaagaccaaaatgtgtaataaagagaagttaagggaccaaaataaatcgaattttaattaaggg 23472891  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||||    
T  23472892 accaaagcgaaactacctaaatagttaagggaccaaaaatgcaattta 23472939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 43726468 - 43726243
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||          |||| ||||||||||    
T  43726468 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcacaaaaaaatttcagaagaaaatgaagaaaacttaacatttttgaatt 43726369  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | | ||| ||  ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||| || ||||| ||||||     
T  43726368 aaaactaatgaaaa-gatcaaaatgtgtaacagagagaagttaaggaaccaaa-taaatcaaattttaattaagggaccaaagcgagactacttaaataa 43726271  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || ||||||||||||| |||||||||||    
T  43726270 ttaagggaccaaaaatacaatttaacct 43726243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38842248 - 38842085
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||| ||||||||||| ||||||||||||||||| || |||||||  | ||||||| |||||||||||||||||||| | ||    
T  38842248 ctcctctttttcatcttcatataatctccatcaatcttcaacaacaagaatctcataaaaattctagaagaaaacctaacgtttttgaattaaaattaac 38842149  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
     |||| ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||    
T  38842148 agaaaggaccaaaatgtgtaacagagagaagttaa-ggatcaaaataaatcgaattttaattaag 38842085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 9230903 - 9230720
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccaga-aaaatttcataagaaaat---------ctaacgtttttgaat 90  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||  | | |||| |||| ||||||||         |||||||||||||||    
T  9230903 ctcctcttattcatcttcatatcatctccatcaaccttcaacaacaagaatcaaaaacaaaaattcagaagaaaatgaagaaaacctaacgtttttgaat 9230804  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||| | ||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9230803 taaaattaacggaaatgatcaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaag 9230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 35085889 - 35085742
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || |||| ||  ||||||||||||| |||||||||||||||||||| |||||||||||||||||||  |    
T  35085889 aagaaaacctaacatttttgaattaaaactaactgaaaggatcaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaagg 35085790  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  35085789 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 35085742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35085899 - 35086134
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatca-accttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaat 90  Q
    |||||||||||||| |||||||||||| |||   |||||||||||||||||||||| |||||||  | ||||||||          ||||||||||||||    
T  35085899 ctcctctttttcatcttcatatcatcttcatatcaccttcaacaacaagaatcccaaaaaaattctagaagaaaatgaagaaaacttaacgtttttgaat 35085998  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| ||||||| | | ||||| ||||||| |||||||||||||||||| | |||||| ||||||| ||||| |||||||| |||||||||||||||    
T  35085999 taaaactaacggaaaggtccaaaatatgtaacaaagagaagttaagggaccacaataaatcaaattttagttaagggaccaaagcgatactacctaaata 35086098  T
Q  191 gtt-agggaccaaaaatgcaatttaaccttttattt 225  Q
    ||| | ||||||||||||||||||| |||| |||||    
T  35086099 gttaaaggaccaaaaatgcaatttagccttctattt 35086134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 225
Target Start/End: Original strand, 43726478 - 43726636
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||| |||||||||||||      
T  43726478 aagaaactctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcaaattttaattaagga 43726577  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttattt 225  Q
    || |||   |||| |||||||||||| ||||||||||||||||||||| ||| ||||||    
T  43726578 actaaaacaataccacctaaatagttaagggaccaaaaatgcaatttagcctattattt 43726636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 5238601 - 5238454
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||| |    
T  5238601 aagaaaacttaacgtttttgaagtaaaactaacggaaaggactaaaatgtgtaacagagagaacttaagggaccaaaataaattgaattttaattaaggg 5238502  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||||||||| |||| | ||| |||||||||||||||    
T  5238501 accaaagcgatactacctaaacagttaatggatcaaaaatgcaattta 5238454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 8769432 - 8769281
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||||||||||| || ||||||| ||| |||||||||||| |||||||||||||||| |||| |||||| |||||||||| || |    
T  8769432 aagaaaacctaacgtttttgaattaaatctaacggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaattttaattcaggg 8769333  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||   ||||||||||||||||| |||||||||||||||||||||||||    
T  8769332 accaaaacaatactacctaaatagttaagggaccaaaaatgcaatttaacct 8769281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 23472791 - 23472596
Alignment:
Q  29 catcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgt 119  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||         |||||||||||||||||||||| | ||||||||| ||||| |||    
T  23472791 catcaaccttcaacaataagaatcccagaaaaattccagaagaaaatgaagaaaatctaacgtttttgaattaaaactaatggaaatgaccaaaatatgt 23472692  T
Q  120 aacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||| |||||||||||| | |||||| | |||||||||||||||||  |||||||  |||||||||||||||||| ||||||||||||| |||||||    
T  23472691 aacggagagaagttaaagaaccaaaatgaatcgaattttaattaaaagaccaaaacgatactacctaaatagttaagggaccaaaaatacaattta 23472596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 217
Target Start/End: Complemental strand, 39118234 - 39118010
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    |||| |||||||| |||||||||| |||||||||||| ||||| ||||||||| ||||||||  | ||||||||         |||||||||||||||||    
T  39118234 tcctatttttcatcttcatatcatttccatcaacctttaacaataagaatccc-gaaaaattctaaaagaaaatgaagaaaatctaacgtttttgaatta 39118136  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||| | || |||||||| ||||||||||||||| |||||||| || | |||| ||||||||| |||||||||| || ||||  |||||||||||||||||    
T  39118135 aaattaacagaaatgaccaaaatgtgtaacagatagaagttagggaatcaaaataaatcgaaatttaattaagggatcaaaacgatactacctaaatagt 39118036  T
Q  193 t-agggaccaaaaatgcaatttaacc 217  Q
    | ||||||||||||| ||||||||||    
T  39118035 taagggaccaaaaatacaatttaacc 39118010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 21522454 - 21522604
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||| |||||||| |||||| ||||||||||||| |    
T  21522454 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgt-taacggagagaagttaa-ggaccaaaataaatcaaattttaattaaggg 21522551  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| ||| |||||||||||||| ||||||||||||  ||||||||||||    
T  21522552 accaaagcgatgctacctaaatagttaagggaccaaaaacacaatttaacctt 21522604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 43140833 - 43140689
Alignment:
Q  83 ttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    ||||||||||||||| || |||||||| ||||| |||||||||||| ||||||| ||||||| |||||| ||||||||||||| |||||||| |||||||    
T  43140833 ttttgaattaaaactaacagaaatgaccaaaatatgtaacagagaggagttaagagaccaaaataaatcaaattttaattaagggaccaaagcgatacta 43140734  T
Q  183 cctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
     |||||||||| |||||| ||||||||||||||||||||| ||||    
T  43140733 tctaaatagttaagggactaaaaatgcaatttaaccttttttttt 43140689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 11678939 - 11679085
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| ||||||||| |||||| ||||||||||| ||||||||||||||| ||||||||| ||| |||| |||||||||||||||||||| |    
T  11678939 aagaaaaactaacctttttgaat-aaaactaacggaaatgaccaaaatgtgtaacagatagaagttaaaggatcaaaataaatcgaattttaattaaggg 11679037  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||| ||||||||| ||||||||||||| |||||||    
T  11679038 accaaagcgatactacttaaatagttaagggaccaaaaatacaattta 11679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 22338499 - 22338284
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| ||| |||||| ||||||||||||||||||||| ||||| ||||||||| || ||||||||         ||||||||||||||||    
T  22338499 ctcctcttcttcatcttcgtatcatttccatcaaccttcaacaacaaaaatcctagaaaaattccaaaagaaaatgaagaaactctaacgtttttgaatt 22338400  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||||| ||||||||||| ||||||||||||||| || ||||||||  |||||| |||||| |||||||||||||  |||||||  ||||||  ||||||    
T  22338399 aaaactaacggaaatgaccaaaatgtgtaacagatagaaagttaagataccaaaataaatcaaattttaattaaggtaccaaagcaatactaattaaata 22338300  T
Q  191 gtt-agggaccaaaaa 205  Q
    ||| ||||||||||||    
T  22338299 gttaagggaccaaaaa 22338284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 26920153 - 26920300
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |    
T  26920153 aagaaaacttaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaggg 26920252  T
Q  168 accaaagtgatactacctaaatag-ttagggaccaaaaatgcaattta 214  Q
    ||||||| ||||| ||| |||||| | |||||  ||||||||||||||    
T  26920253 accaaagcgatacaaccgaaatagataagggattaaaaatgcaattta 26920300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 47250707 - 47250565
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||  | ||||||||||||||||||| ||||| |||||||||||||| |    
T  47250707 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatatgtaatggggagaagttaagggaccaaaataaattgaattttaattaaggg 47250608  T
Q  168 accaaagtgatactacctaaatagttagggaccaaaaatgcaa 210  Q
    |||||| |||||||||||||||| ||| ||  |||||||||||    
T  47250607 accaaaatgatactacctaaataattaagggacaaaaatgcaa 47250565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 2357217 - 2357064
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| |||||||||||  |||||||||||||||| |||| |||||| ||||||||||||| |    
T  2357217 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcaaattttaattaaggg 2357118  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||||||  ||||||||| || || ||||||||||||||| |||||    
T  2357117 accaaagtgatactatttaaatagttaagagatcaaaaatgcaatttagccttt 2357064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 41758834 - 41758667
Alignment:
Q  63 ttcataagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaatt 162  Q
    |||| ||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  41758834 ttcaaaagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaatt 41758735  T
Q  163 aagcgaccaaagtgatactacctaaatagtt-agggac---caaaaatgcaatttaaccttttatttt 226  Q
    ||| |||||||  |||||||  ||||||||| ||||||    |||||||||||||| |||||| ||||    
T  41758734 aagggaccaaaacgatactatttaaatagttaagggacaaaaaaaaatgcaatttagccttttttttt 41758667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 36506976 - 36507171
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataa------gaaaatctaacgtttttgaattaaaactt 98  Q
    |||| ||||| |||||||||||||||||||| ||||||||||| | ||| |||||||||||| ||      ||||| |||| |||||||||||||||||     
T  36506976 tcttcttcatcttcatatcatctccatcaacattcaacaacaaaattccgagaaaaatttcagaaaatgaagaaaacctaatgtttttgaattaaaacta 36507075  T
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    || |||||||| ||||||||||||||| ||||||||||  ||| || |||||| ||||||||||||| |||||||  |||||||  ||||||||||    
T  36507076 acagaaatgaccaaaatgtgtaacagaaagaagttaagataccgaaataaatcaaattttaattaagggaccaaatcgatactaattaaatagtta 36507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 9230913 - 9231052
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||| |    
T  9230913 aagaaaacataacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagtgaccaaaataaatcaaatcttaattaaggg 9231012  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    ||||||  |||||||||||||| ||| |||||||||||||    
T  9231013 accaaaacgatactacctaaatcgttaagggaccaaaaat 9231052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 205
Target Start/End: Original strand, 28349544 - 28349754
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaattaaa 94  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||| ||||         |||||||||||||||||||||||    
T  28349544 ctctttttcatcttcatatcatctctatcaaccttcaacaacaaaaatccgagaaaaatttcaaaagaaaatgaagaaaatctaacgtttttgaattaaa 28349643  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| ||| ||| ||| ||||||||||| ||||| ||||||||  |||||| |||||  ||||||||||||| |||||||   ||||||  |||||||||     
T  28349644 actaacgaaaaggaccaaaatgtgtaa-agagaaaagttaagataccaaaataaattaaattttaattaagggaccaaaacaatactaattaaatagtta 28349742  T
Q  194 agggaccaaaaa 205  Q
    ||||||||||||    
T  28349743 agggaccaaaaa 28349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 34568823 - 34568942
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||| || |    
T  34568823 aaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtataacagagagaagttaagggacaaaaataaatcaaattttaattaagggatc 34568922  T
Q  171 aaagtgatactacctaaata 190  Q
    ||||||||||||| ||||||    
T  34568923 aaagtgatactacataaata 34568942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 24119861 - 24119711
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| |||| ||||||||||||||||| ||||||||||| ||||| |||||| |||||||||||||||| ||||  ||||| ||||||||||||| ||||    
T  24119861 aaaacctaatgtttttgaattaaaactaacggaaatgaccaaaatttgtaacggagagaagttaagggatcaaaagaaatcaaattttaattaagagacc 24119762  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||||||| |||||||||| ||  |||||||||| |||||| |||||    
T  24119761 aaagtgatactatctaaatagttaagaaaccaaaaatgtaatttagccttt 24119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 2357237 - 2357438
Alignment:
Q  22 tcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc--------taacgtttttgaattaaaacttacggaaatgactaaa 113  Q
    |||||| ||||||||||||||||||||||| || |||||||| |  ||||||||         |||| |||||||||||||||| ||  ||| ||| |||    
T  2357237 tcatcttcatcaaccttcaacaacaagaattcctgaaaaattccggaagaaaatgaaaaaatgtaacatttttgaattaaaactaacaaaaaggaccaaa 2357336  T
Q  114 atgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||| ||||| | |||||  |||||||||||||||||| |||||||| |||| |||||    
T  2357337 atgtgtaacagagagaagttaagggaccaaaataaattgaattttagttaagggcccaaaacgatactacctaaatagttaagggaccagaaatacaatt 2357436  T
Q  213 ta 214  Q
    ||    
T  2357437 ta 2357438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 473339 - 473189
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||||| |||||||| | ||||| |||   ||||||||||||||| ||||||||| |||||| |||||||||||||| ||||| |    
T  473339 aagaaaatctaacgtttttgacttaaaactaaaggaaaggac---aatgtgtaacagagaaaagttaaggaaccaaaataaatcgaattttagttaaggg 473243  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||||| ||||||||||| || || ||||||||||||||| |||||    
T  473242 accaaagcgatactgcctaaatagttaagcgatcaaaaatgcaatttagccttt 473189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 44486168 - 44486315
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||| ||||| ||||| || |||| ||| ||||| |||||||||||||| ||||||||||||| |||||  ||| ||||||||  |    
T  44486168 aagaaaatctaacgttttggaatttaaactaacagaaaggaccaaaatatgtaacagagagaaattaagggaccaaaataaattaaatattaattaaagg 44486267  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||    
T  44486268 accaaagcgatactacctaaatagttaaaggaccaaaaatgcaattta 44486315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 37143980 - 37143776
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataa---------gaaaatctaacgtttttgaattaaaacttac 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||  | ||         |||||||| | ||||||||||||||||| ||    
T  37143980 ttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattctagaaaaaaatgaagaaaatctgatgtttttgaattaaaactaac 37143881  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||  ||||||||||||||||| ||||||||  |||||| |||||| ||||||||||||| |||||||  |||||||  ||||||||| ||||||    
T  37143880 ggaaaggatcaaaatgtgtaacagagaaaagttaagataccaaa-taaatcaaattttaattaagggaccaaaacgatactaattaaatagttaagggac 37143782  T
Q  200 caaaaa 205  Q
    ||||||    
T  37143781 caaaaa 37143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 32706968 - 32707114
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||  || |||| ||| ||||| ||||||||||||||||||| ||||||||  ||||||| ||||||||||| |    
T  32706968 aagaaaacctaacgtttttgaattaaaaca-acagaaaggaccaaaatatgtaacagagagaagttaatggaccaaaagaaatcgagttttaattaaggg 32707066  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||||||| ||||||| || |||||| |||||| |||||||    
T  32707067 accaaagcgatactatctaaataattaagggactaaaaatacaattta 32707114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 38842258 - 38842404
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| || |||||||| || ||||||||| |  ||||||| || ||||||| |||||||||||||| ||||| |    
T  38842258 aagaaaatctaacgtttttgaattaaaactaacagaaatgaccaatatgtgtaacgggtagaagtt-agagaccaaaataaatcgaattttagttaaggg 38842356  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| ||| |||||||||||||| ||| | ||||||| |||||||    
T  38842357 accaaagcgatgctacctaaatagttaaggaatcaaaaatacaattta 38842404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 44448148 - 44448295
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||  ||| ||| ||||||||||||||||| |||||||||||||||| |||||  ||||||||||||| |    
T  44448148 aagaaaacctaacatttttgaattaaaactaacataaaggaccaaaatgtgtaacagagaaaagttaagggaccaaaataaattaaattttaattaaggg 44448247  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||| |||||| || | |||| |||||| |||||||    
T  44448248 accaaagcgatactacttaaataattaaaggactaaaaatccaattta 44448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 44485570 - 44485715
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||| ||||| ||||| ||||| ||||||| ||| |||||||||||| |||||||||||||||| |||| ||||| |||| ||||||||  |||    
T  44485570 gaaaacctaatgttttggaatttaaactaacggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaattgaatattaattaaaggac 44485669  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||| |||| ||| ||||||||| | |||||||||||||||||||    
T  44485670 caaagcgataatacttaaatagttaaaggaccaaaaatgcaattta 44485715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 48704035 - 48703862
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| |||| |||||||| | || ||||||||         ||||||||||||||||    
T  48704035 ctcctctttttcatcttcatatcatctccatcaaccttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccctaacgtttttgaatt 48703936  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    |||||| |||||||| || ||||  ||||||||||||||  | |   |||||| ||||||||||||||||||||    
T  48703935 aaaactaacggaaataaccaaaagttgtaacagagagaaaattaaaaaccaaaataaatcgaattttaattaag 48703862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 37143999 - 37144150
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||||| ||| |||||||||| ||||||||||  |||||||||||  ||||| || |||||  |||||| |||||| |||||||||||||     
T  37143999 aagaaaacctaacgtatttaaattaaaactaacggaaatgatcaaaatgtgtaaggagaga-aaattaagataccaaaataaatcaaattttaattaagg 37144097  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    |||||||  |||||||  ||||||||| |||||||||||||||||||||||||    
T  37144098 gaccaaaacgatactaattaaatagttaagggaccaaaaatgcaatttaacct 37144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 47305277 - 47305130
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagaga-gaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||||| |||||||||||||| ||||||||||  |||||||||||  ||||  ||||||||  |||||| |||||| |||||||||||||     
T  47305277 aagaaaacctaacgtctttgaattaaaactaacggaaatgatcaaaatgtgtaa-ggagataaagttaagataccaaaataaatcaaattttaattaagg 47305179  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||| |||||||  ||||||||| ||||||||||||| |||||||    
T  47305178 gaccaaagcgatactaattaaatagttaagggaccaaaaatacaattta 47305130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 194
Target Start/End: Original strand, 47305290 - 47305489
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||| ||||| ||||||| |||| |||||||||| |||||||| ||||| ||||||||| || ||||||||         ||||| |||||||||||||    
T  47305290 ctcttcttcatcttcatattatcttcatcaacctttaacaacaaaaatccgagaaaaattccaaaagaaaatgaagaaaacctaacatttttgaattaaa 47305389  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    ||| | ||||||||| |||||||||||  ||| |||||||||  |||||| |||||  ||||||||||||| || ||||  |||||||  ||||||||||    
T  47305390 actaatggaaatgaccaaaatgtgtaatggagtgaagttaagataccaaaataaattaaattttaattaagggagcaaaacgatactaattaaatagtta 47305489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 47251047 - 47250942
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagag-agaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||| |||||||||||| |||||||| ||||||| ||| |||||||||||| | | |||||||||||||||||| ||||||||||||||||||||     
T  47251047 aagaaaatttaacgtttttga-ttaaaactaacggaaaggaccaaaatgtgtaacgggggagaagttaagggaccaaaataaatcgaattttaattaagg 47250949  T
Q  167 gaccaaa 173  Q
    |||||||    
T  47250948 gaccaaa 47250942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 177
Target Start/End: Original strand, 23437388 - 23437497
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| |||| || ||| ||||||||||||| ||| |||||| | ||||||| |||||| ||||||||||||| |    
T  23437388 aagaaaacctaacatttttgaattaaaactaacgggaaggaccaaaatgtgtaacaaagataagttacgagaccaaaataaatcaaattttaattaaggg 23437487  T
Q  168 accaaagtga 177  Q
    ||||||||||    
T  23437488 accaaagtga 23437497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 31623660 - 31623807
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |  |||| ||| |||||||||||| |||| |||||| ||||||||| |||||| ||||||| || || |    
T  31623660 aagaaaacctaacgtttttgaattaaaactaatcgaaaggaccaaaatgtgtaacggagaaaagttatgggaccaaaataaatcaaattttacttgaggg 31623759  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     |||||  |||||||||| |||| || ||| || ||||||||||||||    
T  31623760 tccaaaacgatactacctgaataattaaggtactaaaaatgcaattta 31623807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18731179 - 18731241
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  18731179 ctcctctttttaatcatcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 18731241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26920143 - 26920069
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||||||||||  ||||||||    
T  26920143 ctcctcttttttattttcatatcatctccatcacccttcaacaacaagaattcaagaaaaatttctgaagaaaat 26920069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 48704105 - 48704183
Alignment:
Q  129 aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    ||||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  48704105 aagttaaaggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 48704183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 10625233 - 10625180
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa 121  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||    
T  10625233 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaa 10625180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5238611 - 5238673
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||||||| || |||||||||||||||  ||| |||||||| |||||||||||||||    
T  5238611 ctcctctttttcatcttaatatcatctccatcactcttgaacaacaaaaatcccagaaaaatt 5238673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 24119865 - 24119939
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaacc-ttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||||| ||||| || |||||||||||||||||| |||||| |||||| ||||||||||||| || ||||||||    
T  24119865 tcctcttcttcatctttatatcatctccatcaacctttcaactacaagagtcccagaaaaattccagaagaaaat 24119939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 173
Target Start/End: Complemental strand, 38676200 - 38676103
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||||||||| |||||||  | ||||||||||| |||| ||||||||||||| |||||||| ||||||| |||||| || |||| ||||| |||||||    
T  38676200 ctaacgttttt-aattaaatttaacggaaatgaccaaaacgtgtaacagagagaaagttaagagaccaaaataaatcaaaatttagttaagggaccaaa 38676103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 214
Target Start/End: Complemental strand, 10625178 - 10625109
Alignment:
Q  146 taaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||| ||||| ||||||   |||||||||||||||||| |||||||||||||| ||||||    
T  10625178 taaatcgaattttagttaagggaccaacacgatactacctaaatagttaagggaccaaaaatgtaattta 10625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 219
Target Start/End: Original strand, 22338517 - 22338664
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaaggga--ccaaagtaaatcgaattttaattaagcgaccaa 172  Q
    ||||| |||||||||||||| | | | ||| ||| ||||||||||| |||||||| |||| |  |  ||||| |||||  ||||||||||||| ||| ||    
T  22338517 ctaacatttttgaattaaaattaatgtaaaggaccaaaatgtgtaatagagagaaagttacgacataccaaaataaatgaaattttaattaagggacgaa 22338616  T
Q  173 agtgatactacctaaatagtta-gggaccaaaaatgcaatttaacctt 219  Q
    || |||||||  ||| |||||| |||||||||||||||||||| ||||    
T  22338617 agcgatactaattaattagttaagggaccaaaaatgcaatttagcctt 22338664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 15326998 - 15326896
Alignment:
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||||| ||||||| ||| |||||||||||  ||||||| ||||||  |||||| |||||| ||||||||||||| |||||||  |||||||  ||||||    
T  15326998 aaaactaacggaaaggaccaaaatgtgtaag-gagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatactaattaaata 15326900  T
Q  191 gtta 194  Q
    ||||    
T  15326899 gtta 15326896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 136
Target Start/End: Original strand, 15327031 - 15327166
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||  ||||||||| || |||||| |         |||||||||| |||||||||   ||    
T  15327031 ttcatcttcgtatcatctccatcaaccttcaacaacaaaaatctgagaaaaattccagaagaaattgaagaaaacctaacgttttagaattaaaatacac 15327130  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaag 136  Q
    ||||||||| ||||| | |||| |||||| ||||||    
T  15327131 ggaaatgaccaaaatatataacggagagatgttaag 15327166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 4156538 - 4156638
Alignment:
Q  118 gtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-gggaccaaaaatgcaatttaa 215  Q
    ||||||||||||| || ||| ||||||| |||||| ||||||| ||| |  ||||||  |||||||  |||||||||| ||||||||||| |||||||||    
T  4156538 gtaacagagagaaatttaagagaccaaaataaatcaaattttagttagggtaccaaacagatactaattaaatagttaagggaccaaaaaggcaatttaa 4156637  T
Q  216 c 216  Q
    |    
T  4156638 c 4156638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 28264652 - 28264714
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    ||||||||||||| |||||| ||||||| ||||  ||||||| ||||||||  ||||||||||    
T  28264652 ttaagggaccaaaataaatcaaattttagttaaaagaccaaattgatactaattaaatagtta 28264714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 173
Target Start/End: Original strand, 40263556 - 40263652
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||||||||| |||||||  | | ||||||||| |||| |||||||| |   |||||||||||||||| |||||| || |||| ||||| |||||||    
T  40263556 ctaacgttttt-aattaaatttaatggaaatgaccaaaacgtgtaacaaaagaaagttaagggaccaaaataaatcaaaatttagttaagggaccaaa 40263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 132)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 52606344 - 52606126
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||| | |||||||| ||    
T  52606344 ctcctctttttcatattcatatcatctc-atcaaccttcaacaacaagaatcccagaaaaattccagaagaaaacctaacgttttttatttaaaactaac 52606246  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-gggac 199  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||  |||||||| |||||||||| |||||    
T  52606245 ggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaaacgatactacataaatagttaagggac 52606146  T
Q  200 caaaaatgcaatttaaccttt 220  Q
    ||||| ||||||||| |||||    
T  52606145 caaaa-tgcaatttagccttt 52606126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 34521426 - 34521641
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||| |||||| ||||||||||||||| ||    
T  34521426 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatccaaaaaaaattccagaagaaaacctaacgcttttgaattaaaactaac 34521525  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    | |||  || |||||||||||| || |||| ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  34521526 gaaaagaaccaaaatgtgtaacggaaagaaattaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggac 34521625  T
Q  200 caaaaatgcaatttaa 215  Q
    ||||||||||||||||    
T  34521626 caaaaatgcaatttaa 34521641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 19124345 - 19124546
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacggaa 104  Q
    |||||||||| |||||||||||||||||||| ||||| | || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  19124345 tctttttcatcttcatatcatctccatcaactttcaatagcaggaatcccagaaaaatttcagaagaaaatctaacgtttttgaattaaaactaacggaa 19124444  T
Q  105 atgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggaccaaaa 204  Q
    || || ||||||||||||||||| |||| ||| ||||||| |||||| ||||||||||||| |||||||  ||||||||||||||||||| |||||||||    
T  19124445 ataaccaaaatgtgtaacagagaaaagtcaagagaccaaaataaatcaaattttaattaagggaccaaaacgatactacctaaatagttaaggaccaaaa 19124544  T
Q  205 at 206  Q
    ||    
T  19124545 at 19124546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12123250 - 12123466
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||  | |  |||||| |||||| ||||||||||||||| ||    
T  12123250 ctcctctttttcatcttcatatcatccccgtcaaccttcaacaacaagaatcccagaagaaaatga--agaaaacctaacgcttttgaattaaaactaac 12123347  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| |||||||||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  12123348 ggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaagggac 12123447  T
Q  200 caaaaatgcaatttaacct 218  Q
    |||||||| ||||||||||    
T  12123448 caaaaatgaaatttaacct 12123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 26332540 - 26332315
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||         |||| |||||||||||||||    
T  26332540 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaataccagaaaa-tttcaaaagaaaatgaagaaaacctaatgtttttgaattaaaa 26332442  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta- 194  Q
    || ||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||| |||||||||||||||||||     
T  26332441 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaaatttaattaagggaccaaagcgatactacctaaatagttag 26332342  T
Q  195 gggaccaaaaatgcaatttaacctttt 221  Q
    |||||||||||||||||||| ||||||    
T  26332341 gggaccaaaaatgcaatttagcctttt 26332315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 8846236 - 8846459
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||         ||||||||| ||||||||||    
T  8846236 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaatctaacatttttgaatt 8846335  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||| ||||||||||||||||    
T  8846336 aaaactaacggaaatgaccaaaatgtgtaacaaagagaagttaaaagaccaaaataaatggaattttagttaagtgaccaaagcgatactacctaaatag 8846435  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||||||||||    
T  8846436 ttaagggaccaaaaatgcaattta 8846459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41998045 - 41997815
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||         ||||||||||||||||    
T  41998045 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaataccagaagaaaatgaagtaaacctaacgtttttgaatt 41997946  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||  ||||||| ||||||||||| |||||||||||||||||||||| |||||  ||||||||||||| |||||||  ||||||||||||||||    
T  41997945 aaaactaacaaaaatgaccaaaatgtgtaatagagagaagttaagggaccaaaataaattaaattttaattaagggaccaaaacgatactacctaaatag 41997846  T
Q  192 tt-agggaccaaaaatgcaatttaacctttt 221  Q
    || |||||||||||||| |||||| ||||||    
T  41997845 ttaagggaccaaaaatgtaatttagcctttt 41997815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4846755 - 4846979
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc---------at-aagaaaatctaacgtttttgaat 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||          || ||||||| |||||||||||||||    
T  4846755 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaaattatagaagaaaatgaagaaaacctaacgtttttgaat 4846854  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| ||||||||| | |||||||||||||||||||||||| | ||||||| |||||||||||||||||||| || ||||| |||||||||||||||    
T  4846855 taaaactaacggaaatggccaaaatgtgtaacagagagaagttatgagaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaata 4846954  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| |||||||||||||||||||||    
T  4846955 gttaagggaccaaaaatgcaattta 4846979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40926171 - 40926393
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||         ||||||||||| ||||    
T  40926171 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaattccagaagaaaatgaaaggaacctaacgtttttcaatt 40926270  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||||||||||| |||||||||||||||| |||||||||| |||||| |||||| ||||||||||||  |||||||||||||||||||||||||    
T  40926271 aaaattaacggaaatgaccaaaatgtgtaacagagtgaagttaagg-accaaaataaatcaaattttaattaatggaccaaagtgatactacctaaatag 40926369  T
Q  192 tta-gggaccaaaaatgcaattta 214  Q
    ||| ||||| ||||||||||||||    
T  40926370 ttaggggactaaaaatgcaattta 40926393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 44069348 - 44069126
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||         |||| ||||||||||||    
T  44069348 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaatgtttttgaatta 44069249  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||| ||| |||||||||||| |  ||||||||||| |||||| |||||||||||||| ||||| |||||||  |||||||||||||||||    
T  44069248 aaactaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcgaattttagttaagggaccaaaacgatactacctaaatagt 44069149  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | |||||||||||||||||||||    
T  44069148 taagggaccaaaaatgcaattta 44069126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 31514023 - 31514255
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||         ||||||||||||||||    
T  31514023 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttgaatt 31514122  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||| || ||||||| ||| ||| |||||||| |||| |||||||||||||||| ||||| |||||||||||||  |||||||| ||||||||||||||||    
T  31514123 aaagctaacggaaa-gaccaaactgtgtaacggagaaaagttaagggaccaaaataaattgaattttaattaaaggaccaaagcgatactacctaaatag 31514221  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttatt 224  Q
    || |||||| |||||||||||||| ||| |||||    
T  31514222 ttaagggactaaaaatgcaatttagcctattatt 31514255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 41208561 - 41208783
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------ataagaaaatctaacgtttttgaatta 92  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||        || ||||||| ||| ||||||||||||    
T  41208561 ctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcgcagaaaaatttctgaagaaaatgagaaaatataatgtttttgaatta 41208660  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||| | ||||||| ||| ||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||| |||||||| |||||||||||||||||    
T  41208661 aaattaacggaaaggaccaaaatgtgtaacagagagatgttaagggactaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagt 41208760  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | |||||| ||||||||||||||    
T  41208761 taagggactaaaaatgcaattta 41208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 45171228 - 45171450
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| | || ||||||||         ||||||||||||||||    
T  45171228 ctcctctttttcatcttc-tatcatctccatcaaccttcaacaacaagaatcctagaaaaactccagaagaaaatgaagaaaacctaacgtttttgaatt 45171326  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||  || |||| ||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||    
T  45171327 aaaactaacggaaatgaccaaaatgtgtaatggaaagaaattaagggaccaaaataaatcgaattttaattaatggaccaaagcgatactacctaaatag 45171426  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||| ||||||||||||||    
T  45171427 ttaagggactaaaaatgcaattta 45171450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 54081509 - 54081284
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| | | |||||||||||| ||||||||         ||||||||||| ||||    
T  54081509 ctcctctttttcatcttcatatcatctccatcaaccttgaacaacaagagttctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttaaatt 54081410  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||| |||||||||    
T  54081409 aaaactaacagaaaagaccaaaatatgtaacagagagaagttaagggactaaaataaatcgaattttaattaag-gaccaaagcgatactgcctaaatag 54081311  T
Q  192 tt-agggaccaaaaatgcaatttaacc 217  Q
    || ||||||||||||| ||||||||||    
T  54081310 ttaagggaccaaaaatacaatttaacc 54081284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 36 - 214
Target Start/End: Complemental strand, 54107860 - 54107672
Alignment:
Q  36 cttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagag 126  Q
    ||||| ||||||||||||||||||||||||| ||||||||         |||| ||||||||||||||||| ||||||||||| |||||||||||| |||    
T  54107860 cttcatcaacaagaatcccagaaaaatttcagaagaaaatgaagaaaacctaatgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggag 54107761  T
Q  127 agaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||    
T  54107760 agaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 54107672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 28688216 - 28688017
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||| | ||| ||| |||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||    
T  28688216 ctcctctttttcatcttcatatcattttcattaacattcaacaacaagaatcccagaaaaatttcaaaagaaaatgaagaatacctaacgtttttgaatt 28688117  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||||||| |||||||||| | ||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||||||||||    
T  28688116 aaaactaatggaaatgaccaaaatgtgtaccggagagaagttaagggaccaaaataaatcaaattttaattaagggatcaaagtgatactacctaaatag 28688017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 29248477 - 29248692
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||| |  ||||||| |||||||||||||||||||||| ||    
T  29248477 ctcctctttttcatcttcgtatcatctccaccaaccttcaacaacaagaattccagaaaaattcctgaagaaaacctaacgtttttgaattaaaactaac 29248576  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    | || |||| ||| |||||||| ||||||||||||||||||||| || ||| ||||||||||||  ||| ||||| |||||| |||||||||| |||||     
T  29248577 gaaattgaccaaattgtgtaacggagagaagttaagggaccaaaatagatcaaattttaattaaaggactaaagtaatactatctaaatagttaagggag 29248676  T
Q  200 caaaaatgcaatttaa 215  Q
    || |||| ||||||||    
T  29248677 cataaatacaatttaa 29248692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 34521413 - 34521269
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||||||||| |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  34521413 aaaatctaacatttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggacc 34521314  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||| ||||||||||||||| || |||||||||||||||||||||    
T  34521313 aaagcgatactacctaaataattaagggaccaaaaatgcaattta 34521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 40410862 - 40410710
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| |||||||| || ||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| |    
T  40410862 aagaaaacctaacgttttttaattaaaactaacggaaataaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattaaggg 40410763  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  40410762 accaaagcgatactacctaaatagttaagggaccaaaaatgcaatttaacctt 40410710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 2829568 - 2829803
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||         ||||||||||||||||    
T  2829568 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagagttccagaaaaattccatgagaaaatgaagaaaacctaacgtttttgaatt 2829667  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||||||| ||||| |||||| |||| |||||||||||||||| |||||| ||||||||||||  |||||||   ||| ||| |||||||    
T  2829668 aaaactaatggaaatgaccaaaatatgtaacggagaaaagttaagggaccaaaataaatcaaattttaattaaaagaccaaatcaataatacataaatag 2829767  T
Q  192 ttagggaccaaaaatgcaatttaaccttttattttc 227  Q
    ||| ||| ||||||||||||||| ||| | ||||||    
T  2829768 ttaaggatcaaaaatgcaatttagcctatgattttc 2829803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7742991 - 7742775
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||||| ||||||| |  ||||||| |||||||||||||||||||| | ||    
T  7742991 ctcctctttttcatcttcatatcatctccatcatccttcaacaataagaatcccaaaaaaatt-ctgaagaaaacctaacgtttttgaattaaaattaac 7742893  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||| |||||||| |||||||||||| |||| || |||| |||||| |||||||||||||  |||||| | ||  ||||||||||||| ||||||    
T  7742892 ggaaaagaccaaaatgtgcaacagagagaagataagagaacaaaataaatcaaattttaattaagtaaccaaaataatgttacctaaatagttaagggac 7742793  T
Q  200 caaaaatgcaatttaacc 217  Q
     ||||||||||| |||||    
T  7742792 taaaaatgcaatataacc 7742775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 35753657 - 35753477
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat--------ctaacgtttttgaatta 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || || || ||        |||||||||||||||||    
T  35753657 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaaaaatatgaagaaaactaacgtttttgaatta 35753558  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    ||||| ||| ||||||| ||||||||| ||  |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  35753557 aaactaacgaaaatgaccaaaatgtgtcacgtagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaa 35753477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 41208551 - 41208400
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||||||||||| || ||||||||||| |||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  41208551 aagaaaacctaacgtttttgaattaaatctaacggaaatgaccaaaatgtgcaacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 41208452  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||    
T  41208451 accaaagcgatactacttaaatagttaagggaccaaaaatgcaatttaacct 41208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 214
Target Start/End: Original strand, 50819381 - 50819600
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaattaaaa 95  Q
    |||||||||| || |||||||||||||||||||| |||||||||| ||| |||||||||||| ||||         ||||||||||||||||||||||||    
T  50819381 tctttttcatctttatatcatctccatcaacctttaacaacaagagtcctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttgaattaaaa 50819480  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || ||  ||| ||| ||||||||||||| | |||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||||| || |||| |    
T  50819481 ctaacaaaaaggacgaaaatgtgtaacacatagaagtaaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactaccttaacagttaa 50819580  T
Q  195 gggaccaaaaatgcaattta 214  Q
    | ||||||||||||||||||    
T  50819581 gagaccaaaaatgcaattta 50819600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 50856483 - 50856264
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| || |||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||||         ||||||||||||||||||||    
T  50856483 tctttttcatctttatatcatctccatcaacctttaacaacaagagtcctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttgaattaaaa 50856384  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || ||  ||| ||| ||||||||||||| | |||||| ||||||||||| |||||||||||||||||||| |||||||| |||||||||| || |||| |    
T  50856383 ctaacaaaaaggacgaaaatgtgtaacacatagaagtaaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactaccttaacagttaa 50856284  T
Q  195 gggaccaaaaatgcaattta 214  Q
    | ||||||||||||||||||    
T  50856283 gagaccaaaaatgcaattta 50856264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 34630178 - 34629980
Alignment:
Q  31 tcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa 121  Q
    ||||||||||||||||||||||||||||||||| || ||||||||          ||||||||||||||||||||| ||||||| ||| |||||||||||    
T  34630178 tcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacttaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaa 34630079  T
Q  122 cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    | |||||||||||| |||||||| |||||||||||||||||||| |||||||  |||||||| ||||||||| |||||||||||||  |||||||||||    
T  34630078 cggagagaagttaatggaccaaaataaatcgaattttaattaagggaccaaaacgatactacttaaatagttaagggaccaaaaatataatttaacctt 34629980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 45871847 - 45871693
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||| |||| |||||||||| |||||||||||  |||||| |||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  45871847 aagaaaacctaacgatttttaattaaaactaacggaaatgacccaaatgtataacagagagaatttaagggaccaaaataaatcgaattttaattaaggg 45871748  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  45871747 accaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagcctttt 45871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 7950478 - 7950265
Alignment:
Q  24 atctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaa 114  Q
    ||||||||| ||||||||||||||||||  ||||||||||||| ||||||||         |||||||||||||||||||||| |||||||  || ||||    
T  7950478 atctccatccaccttcaacaacaagaatttcagaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaagaaccaaaa 7950379  T
Q  115 tgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||   ||||||| ||||||||| |||||| |||||||||||||    
T  7950378 tgtgtaacagagaaaagttaaaggaccaaaataaatcgaattttaattaagagaccaaaacaatactacataaatagttaagggactaaaaatgcaattt 7950279  T
Q  214 aaccttttattttc 227  Q
    | |||||| |||||    
T  7950278 agcctttttttttc 7950265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 14353274 - 14353045
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcat---aagaaaat--------ctaacgtttttgaa 89  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||| ||    || |||||        ||||| ||||||||    
T  14353274 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatctcataaaaattccaggaaaaaaaaatgaagaaacctaacatttttgaa 14353175  T
Q  90 ttaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    |||||||| ||||||||| | ||||||||| ||||||  |||||||||||| ||| |||||| ||||||||||||| |||||||| ||||||||||||||    
T  14353174 ttaaaactgacggaaatggccaaaatgtgtcacagaggaaagttaagggactaaaataaatcaaattttaattaagggaccaaagcgatactacctaaat 14353075  T
Q  190 agtt-agggaccaaaaatgcaatttaacct 218  Q
    | || ||||| |||||||||||||||||||    
T  14353074 aattaagggatcaaaaatgcaatttaacct 14353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 27254206 - 27254008
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||||| || ||||||||         ||||| ||||||||||||||    
T  27254206 tctttttcatcttcatatcatcttcatcaatcttcaacaataagaatcccagaaaaattccagaagaaaatgaagaaaacctaacatttttgaattaaaa 27254107  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    || |||||||| |  |||||||||||| |||||||||||||| |||||| |||||| ||||||||||||| |||||||| |||||| ||||||||||||    
T  27254106 ctaacggaaataatcaaaatgtgtaacggagagaagttaaggaaccaaaataaatcaaattttaattaagggaccaaagcgatactgcctaaatagtta 27254008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 70 - 214
Target Start/End: Original strand, 26332556 - 26332705
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagt-----taagggaccaaagtaaatcgaattttaattaa 164  Q
    ||||| |||| ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||     |||||||||||| |||||||||||||||||||    
T  26332556 gaaaacctaatgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagttaagggaccaaaataaatcgaattttaattaa 26332655  T
Q  165 gcgaccaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    | |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  26332656 gggaccaaagcgatactacctaaatagttaaggaccaaaaatgcaattta 26332705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 50819370 - 50819225
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  |||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  50819370 aagaaaacttaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagataagttaagggaccaaaataaatcgaattttaattaagcg 50819271  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    || |||| ||| |||| ||||||||| |||||||||||||||||||    
T  50819270 acgaaagcgatgctacgtaaatagttaagggaccaaaaatgcaatt 50819225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 50856494 - 50856639
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  |||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  50856494 aagaaaacttaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagataagttaagggaccaaaataaatcgaattttaattaagcg 50856593  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    || |||| ||| |||| ||||||||| |||||||||||||||||||    
T  50856594 acgaaagcgatgctacgtaaatagttaagggaccaaaaatgcaatt 50856639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 53841262 - 53841407
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||| |||||||||||||||||| | |    
T  53841262 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaaattaagggaccaaaataaatcgaattttaattacgag 53841361  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    |||||||  |||||| |||||||||| |||||||||||||||||||    
T  53841362 accaaagcaatactagctaaatagttaagggaccaaaaatgcaatt 53841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 78 - 213
Target Start/End: Original strand, 7274889 - 7275024
Alignment:
Q  78 aacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtga 177  Q
    |||||||||||||||||||| |  |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  7274889 aacgtttttgaattaaaactaaaagaaatgaccaaaatgtgtaaca-agagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagtga 7274987  T
Q  178 tactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    |||||||||||||||| | ||||||||||||||||||    
T  7274988 tactacctaaatagttaacggaccaaaaatgcaattt 7275024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 28688226 - 28688378
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||| | ||||||| ||| |||| |||||||| |||||||||||||||||||| |||||| ||||||||||||| |    
T  28688226 aagaaaatctaacgtttttgaattaaaattaacggaaaggaccaaaacgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattaaggg 28688325  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| |||||| ||||||| |||||| ||||    
T  28688326 accaaagcgatactacctaaatagttaagggacaaaaaatgtaatttagcctt 28688378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 54108356 - 54108508
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| |||||||| || ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |    
T  54108356 aagaaaacctaatgtttttgaattaaaactaacggaaataaccaaaatgtataacagagaaaagttaagggaccaaaataaatcgaattttaattaaggg 54108455  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| ||||||| ||||||| || ||||||||||||||||||||| ||||    
T  54108456 accaaagcgatactagctaaataattaagggaccaaaaatgcaatttagcctt 54108508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 8846226 - 8846079
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| |    
T  8846226 aagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaattaatcgaattttagttaagag 8846127  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   ||||||||||||||||| |||||||||||||||||||||    
T  8846126 accaaaacaatactacctaaatagttaagggaccaaaaatgcaattta 8846079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 9028417 - 9028194
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||         ||||||||||||||||    
T  9028417 ctcctctttttcatctttatatcatctccatcaaccttcaacaacatgaatccgagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 9028318  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| |||  || |||||||||| |||  || ||||||| || |||| |||||| |||||||| | || |||||||||||||||||||||||||    
T  9028317 aaaactaacgaaaaataccaaaatgtgtagcaggaaggagttaagagaacaaaataaatcaaattttaacttagggaccaaagtgatactacctaaatag 9028218  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||| ||||||    
T  9028217 ttaagggaccaaaaatgtaattta 9028194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 10756868 - 10756721
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |||||||  |  |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  10756868 aagaaaacctaacgtttttgaattaaaactaacggaaagcaacaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaggg 10756769  T
Q  168 accaaagtgatactacctaaatag-ttagggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||| | ||||||||||||| |||||||    
T  10756768 accaaagcgatactacctaaatagctaagggaccaaaaatacaattta 10756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 12123240 - 12123093
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| |||||||  || ||||||||||||  ||||||||||||| |||||| |||||||||||||||||||| |    
T  12123240 aagaaaacctaacatttttgaattaaaactaacggaaagaaccaaaatgtgtaacgaagagaagttaaggaaccaaaataaatcgaattttaattaaggg 12123141  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||    
T  12123140 accaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 12123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 15862411 - 15862558
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||| |    
T  15862411 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaattgaattttaataaaggg 15862510  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || |||| |||||||||||||||||| |||||| ||||||||||||||    
T  15862511 acaaaagagatactacctaaatagttaagggacaaaaaatgcaattta 15862558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 53678656 - 53678433
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||         ||||| |||||||||||||    
T  53678656 ctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaatttcagaagaaaatgaagaaaacctaacatttttgaattaaa 53678557  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| ||||||||||  |||||||||||| |||||||||||||  || ||| |||||| ||||||||||||  |||||||| |||||||  |||||| ||     
T  53678556 actaacggaaatgatcaaaatgtgtaacggagagaagttaagatactaaaataaatcaaattttaattaaaggaccaaagcgatactatttaaataatta 53678457  T
Q  194 agggaccaaaaatgcaatttaacc 217  Q
    |||||||||||| | |||||||||    
T  53678456 agggaccaaaaacgtaatttaacc 53678433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 7743001 - 7743153
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| | ||||||| |||||| ||||||||||||| |    
T  7743001 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagataagttatgagaccaaaataaatcaaattttaattaaggg 7743100  T
Q  168 accaaagtgatactacctaaatagtt-agggacc-aaaaatgcaatttaacct 218  Q
    | ||||| |||||||||||||||||| ||||||| ||||||| ||||||||||    
T  7743101 atcaaagcgatactacctaaatagttaagggaccaaaaaatgtaatttaacct 7743153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 7937799 - 7937946
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||| ||| ||| |||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||| |    
T  7937799 aagaaaacttaacgtttttgaattaaaactaacgaaaaggaccaaaatgtgtaacggagagaagttaagagaccaaaataattcgaattttaattaaggg 7937898  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||    
T  7937899 accaaagtgatactacctaaatagttaaaggaccaaaaatgaaattta 7937946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 27940422 - 27940275
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||| || || ||||||||||| |||||||||||| |||||||||| |||||||||| |||||| ||||| ||||||| |    
T  27940422 aagaaaacctaatgtttttgaattgaacctaacggaaatgaccaaaatgtgtaacggagagaagtttagggaccaaaataaatcaaatttaaattaaggg 27940323  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  27940322 accaaagtgatactacctaaatagttaagggaccaaaaatgaaattta 27940275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 45171218 - 45171071
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||| |    
T  45171218 aagaaaacataacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacttagagaagttaagggaccaaaataaatcgaattttaattaaggg 45171119  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     ||||||  ||||||||||||||||| |||||||| |||| |||||||    
T  45171118 gccaaagcaatactacctaaatagttaagggaccagaaatacaattta 45171071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 7274869 - 7274650
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaatt 91  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||          |||||||||||| |||||||||||    
T  7274869 ctcctcttttttatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaacgtgaagaaaatctaatgtttttgaatt 7274770  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||| || | ||||||||  ||||| |||||| |||||||||||||||          ||| ||||||||||||| |||||||| |||||||||||||||     
T  7274769 aaagctaatggaaatgaacaaaatctgtaacggagagaagttaaggg----------atcaaattttaattaagagaccaaagcgatactacctaaatat 7274680  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || ||||||||||||||||||||| |||||    
T  7274679 ttaagggaccaaaaatgcaatttagccttt 7274650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 52268264 - 52268493
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaatt 91  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| ||||| | || || |||||          |||||||||||||||    
T  52268264 ctcctctttttcatcttcatagcatctccgtcaaccttcaacaacaagaatcccaaaaaaaatccagaataaaatgaagaaaacttaacgtttttgaatt 52268363  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||||||| || ||||||||||||  |||||||||||  ||||||| ||||| |||||||||||||  |||||||  ||||||| ||||||||    
T  52268364 aaaactaacggaaataaccaaaatgtgtaacgaagagaagttaa-agaccaaaataaattgaattttaattaaaggaccaaaacgatactaactaaatag 52268462  T
Q  192 tt-agggaccaaaaatgcaatttaacctttt 221  Q
    || | ||||||||||||||||||| ||||||    
T  52268463 ttaatggaccaaaaatgcaatttagcctttt 52268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 180
Target Start/End: Complemental strand, 53841247 - 53841065
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaact 97  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| || || |||||         |||||||||||||||||||| |    
T  53841247 ttttttatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaattccagaataaaatgaagaaaacctaacgtttttgaattaaaatt 53841148  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatac 180  Q
     ||||||| ||  |||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  53841147 aacggaaaggatcaaaatgtgcaacagagataagttaagggaccaaaataaattgaattttaattaagcgaccaaagcgatac 53841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 54081519 - 54081673
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaa-tgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| ||||| |||||||||||||| | ||| ||||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||     
T  54081519 aagaaaacctaacatttttgaattaaaaataacgaaaatgaccaaaaatgtgtaacagagagaagttaaggaaccaaaataaatcgaattttaattaagg 54081618  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||||  ||||||||||||||||| ||||||||||||| ||||||| |||||    
T  54081619 gaccaaagcaatactacctaaatagttaagggaccaaaaatacaatttagccttt 54081673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15862401 - 15862185
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||       |||||||||| || ||||||| || ||||||||         |||| |||||||||||    
T  15862401 ctcctctttttcatcttcatatcatctccatcaac-------aacaagaatctcaaaaaaattccagaagaaaatgaagaaaacctaatgtttttgaatt 15862309  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |  |||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||  |||||||| |||||||||||||||     
T  15862308 aaaactaatagaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaataa 15862209  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||| |||||| ||||||    
T  15862208 ttaagggacctaaaatggaattta 15862185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 44069359 - 44069512
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |  |||| ||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||   |    
T  44069359 aagaaaacctaacgtttttgaattaaaactaatagaaaggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagagg 44069458  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  44069459 accaaagcgatactacctaaatagttaagggaccaaaaatacaatttagccttt 44069512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 28691340 - 28691112
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataag---------aaaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||         |||||||||||||||| ||||    
T  28691340 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaatttcggaagaaaatgaaaaaaatctaacgtttttaaatt 28691241  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||  ||| ||  |||||||||||   ||| |||||||||||||||| |||||||||||||| ||||| || |||||  |||| |||||||||     
T  28691240 aaaattaacataaaggatcaaaatgtgtaatgcagaaaagttaagggaccaaaataaatcgaattttagttaagggaacaaagcaataccacctaaataa 28691141  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||||||||||| ||||||| ||||    
T  28691140 ttaagggaccaaaaatacaatttagcctt 28691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 14353284 - 14353438
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||| |||||||| |||||||||||| |||||||  |||||||||||||| ||||| |    
T  14353284 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaa-tgtgtaacggagagaagttaaaggaccaagataaatcgaattttatttaaggg 14353382  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttta 222  Q
    ||||| | |||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  14353383 accaatgcgatactacctaaatagttaagggaccaaaaatacaatttatcctttta 14353438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 40926161 - 40926010
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||| ||| |||| |||||| ||||||||||||| |    
T  40926161 aagaaaacctaacgtttttcaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaatggatcaaaataaatcaaattttaattaagag 40926062  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    | ||||| |||||||| ||||||||| |  ||||||||||||||||||||||    
T  40926061 atcaaagcgatactacataaatagttaaaagaccaaaaatgcaatttaacct 40926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 40639277 - 40639479
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| || |||||||||| |||||||||||||||||| ||||  ||||||||| || ||||||||         ||||||||||||||||    
T  40639277 ctcctcttcttcatctttatatcatctctatcaaccttcaacaacaaaaatctgagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 40639376  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||  ||||||||||| ||||| ||||||||||||||||||||  |||||  |||||| ||||||||||||| |||||||| |||||||  |||||||    
T  40639377 aaaacacacggaaatgaccaaaatatgtaacagagagaagttaagataccaatataaatcaaattttaattaagggaccaaagcgatactaattaaatag 40639476  T
Q  192 tta 194  Q
    |||    
T  40639477 tta 40639479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 40969415 - 40969641
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcata--------agaaaatctaacgtttttgaatta 92  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||| | ||||||||| || |        |||||| |||||||||||||||||    
T  40969415 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaattcaagaaaaattccagataaaatgaagaaaacctaacgtttttgaatta 40969514  T
Q  93 aaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||| ||||||| ||| |||||||||||  ||||| ||||||||  |||||| |||||| ||||||||||||| ||| |||| |||||||  |||||||    
T  40969515 aaactgacggaaaggaccaaaatgtgtaagaagaga-aagttaagataccaaaataaatcaaattttaattaagagactaaagcgatactaattaaatag 40969613  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || |||||||||||||  ||||||||||    
T  40969614 ttaagggaccaaaaatataatttaacct 40969641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17274002 - 17273778
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||         ||||||||||| ||||    
T  17274002 ctcctcttcttcatcttcatatcatctctatcaaccttcaacaacaagaatcc-agacaaatttcaaaagaaaatgaagaaaacctaacgttttttaatt 17273904  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||| ||| ||||| |||||   ||||||||||| |||||||| ||||||||||||||||||||  | ||||  |||||  |||||||||    
T  17273903 aaaactaacgaaaaagaccaaaatatgtaatgaagagaagttaaaggaccaaaataaatcgaattttaattaaggaatcaaaacgatacggcctaaatag 17273804  T
Q  192 tt-agggaccaaaaatgcaatttaac 216  Q
    || |||||||||||||||| ||||||    
T  17273803 ttaagggaccaaaaatgcattttaac 17273778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 35580210 - 35580337
Alignment:
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||| ||||||| |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||| |||||||  |||||||||||||||||    
T  35580210 aaactaacgaaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatagt 35580309  T
Q  193 t-agggaccaaaaatgcaatttaacctt 219  Q
    | ||||||||||||||||||||||||||    
T  35580310 taagggaccaaaaatgcaatttaacctt 35580337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 43899310 - 43899457
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||| || |||||||||| |||| || ||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||| | |    
T  43899310 aagaaaacctaacgttgtttaattaaaactaacggtaaggaccaaaatatgtaacggagagaagttaagggaccaaaataaatcgaattttaattagggg 43899409  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||| ||||||||||||| ||| |||||||||||||||||    
T  43899410 accaaagcgatattacctaaatagttaaggaaccaaaaatgcaattta 43899457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 218
Target Start/End: Complemental strand, 46766836 - 46766621
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacgg 102  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||  ||||| ||  | |  |||||| ||||||||||| |||||||||| ||||    
T  46766836 cctcttcttcatcttcatatcatttccatcaaccttcaacaacaaaaatttcagaagaaaatga--agaaaacctaacgttttttaattaaaactaacgg 46766739  T
Q  103 aaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt-tagggacc 200  Q
    ||||||| |||||||||||| || || ||||||||  |||||| |||||| ||||||||||||| |||||||  |||| || | |||||||  | |||||    
T  46766738 aaatgaccaaaatgtgtaacggatagaaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatattagcaaaatagtaaaaggacc 46766639  T
Q  201 aaaaatgcaatttaacct 218  Q
    ||||||||||||||||||    
T  46766638 aaaaatgcaatttaacct 46766621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 21169816 - 21169668
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||| |||||   |||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  21169816 aagaaaacctaacgtttttgaattaaaactaacgaaaaggaccaaaattgataacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 21169717  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaa 215  Q
    ||||||  |||||||||||||||||| || |||||||||| ||||||||    
T  21169716 accaaaacgatactacctaaatagttaagagaccaaaaatacaatttaa 21169668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 35753667 - 35753823
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| ||||| ||| |  |||||||||||||||| |||| |||||||||||| ||||||  |    
T  35753667 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatatgtgatggagagaagttaagggatcaaaataaatcgaatttaaattaatgg 35753766  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttat 223  Q
    ||||||| |||||||||||||||||| ||| |||||||||| |||||||||| ||||    
T  35753767 accaaagcgatactacctaaatagttaaggtaccaaaaatgtaatttaacctattat 35753823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 47891739 - 47891527
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||| | |||||| || |||||||||||         ||||||||||||||||    
T  47891739 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaattcgagaaaatttccataagaaaatgaagaaaacctaacgtttttgaatt 47891640  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||  ||| ||| ||||||||||||  | ||||||||||  |||||| |||||| ||||||||||||| |||||||| |||||||  ||||| |    
T  47891639 aaaactaacaaaaaggaccaaaatgtgtaacgaatagaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaattg 47891540  T
Q  192 tt-agggaccaaa 203  Q
    || ||||||||||    
T  47891539 ttaagggaccaaa 47891527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 49222253 - 49222040
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| ||| ||||         |||| |||||||||||    
T  49222253 ctcctcattttcatcttcatatcatctccatcaaccatcaacaacaaaaatcccagaaaaatttcaaaaggaaatgaagaaaacctaatgtttttgaatt 49222154  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||||         ||| ||||||||||||||||||||||| | | ||| || |||||||||||||||||||  |||| |||  |||||||||||||||    
T  49222153 aaaact---------gaccaaaatgtgtaacagagagaagttgaagaaccgaaataaatcgaattttaattaaaagaccgaagcaatactacctaaatag 49222063  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || ||||||||||||| ||||||    
T  49222062 ttaagggaccaaaaatacaattt 49222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 37133427 - 37133274
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||||||| ||| ||| ||||||||||||  ||||||||||||  |||||| |||||| ||||||||||||| |    
T  37133427 aagaaaacctaacgtttttgaattaaaacttacgaaaaggaccaaaatgtgtaacgaagagaagttaagataccaaaataaatcaaattttaattaaggg 37133328  T
Q  168 accaaagtgatactacctaaatag-ttagggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||||||  ||||||| | ||||||||||||   ||||||||||||    
T  37133327 accaaagcgatactaattaaatagctaagggaccaaaaacataatttaaccttt 37133274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 5348729 - 5348578
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||| | ||||||||||| |||||||||||  ||||| ||||||||  |||||| |||||| |||||||||| ||     
T  5348729 aagaaaatctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaaggagaga-aagttaagataccaaaataaatcaaattttaattgagg 5348631  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    |||||||| |||||||  ||||||||| |||||| ||||||||||||||||||    
T  5348630 gaccaaagcgatactaattaaatagttaagggactaaaaatgcaatttaacct 5348578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 19124339 - 19124187
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| ||||||||||||  |||||||||||| || |||| || ||||||||||||||| | |    
T  19124339 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacgaagagaagttaagagatcaaaatagatcgaattttaattagggg 19124240  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||  ||| ||| ||||||||| ||||||||||||||||||||| ||||    
T  19124239 accaaagcaatattacttaaatagttaagggaccaaaaatgcaatttagcctt 19124187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 40969405 - 40969258
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||  ||||| ||||||||  |||||| |||||| |||||||||||||     
T  40969405 aagaaaacctaacgtttttgaattaaaactgacggaaatgaccaaaatgtgtaagaagaga-aagttaagataccaaaataaatcaaattttaattaagg 40969307  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||| |||||||  ||||||||| |||||| ||||||||||||||    
T  40969306 gaccaaagcgatactaattaaatagttaagggactaaaaatgcaattta 40969258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 43899230 - 43899114
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  |||  ||||||||||||| | ||    
T  43899230 acggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatgttacctaaatagttaaagg 43899131  T
Q  198 accaaaaatgcaattta 214  Q
    |||||||||||||||||    
T  43899130 accaaaaatgcaattta 43899114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 31514013 - 31513866
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || | || ||| ||||||||||||| ||||||||||| |||||||| |||||| ||||||||||||       
T  31514013 aagaaaacctaacatttttgaattaaaactaactggaaggaccaaaatgtgtaacatagagaagttaaaggaccaaaataaatcaaattttaattaaaga 31513914  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||| |||||||||||||||||| | |||||||||||||||||||    
T  31513913 atcaaagcgatactacctaaatagttaatggaccaaaaatgcaattta 31513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 17102534 - 17102381
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | ||||||||| | ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||| |    
T  17102534 aagaaaacctaacgtttttgaattaaaattaacggaaatgcccaaaatatgtaacagggagaagttaagggaccaaaataaatcgaattttaattaaggg 17102435  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |  |||   ||| |||||||||| || ||  ||||||||||||||||| |||||    
T  17102434 aagaaaacaatattacctaaataattaagaaaccaaaaatgcaatttagccttt 17102381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 51170631 - 51170764
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    ||||| |||||||||| |  |||| ||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||  || ||||  ||||||    
T  51170631 ttttttaattaaaactaattgaaaagactaaaatgtgtaacatagagaagttaaaggaccaaaataaatcgaattttaattaaatgatcaaaacgatact 51170730  T
Q  182 acctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||| ||||| |||||||||||||||    
T  51170731 acctaaatagttaagggatcaaaaatgcaattta 51170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 10756947 - 10757091
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||||||||||||||||||| | ||||||| ||  |||||||||||| ||||||| ||||| ||||||| ||||| |||||||||||||| ||||    
T  10756947 aaaatctaacgtttttgaattaaaattaacggaaaagatcaaaatgtgtaacggagagaaattaagagaccaaaataaattgaattttaattaagggacc 10757046  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||  |||||| ||||||||||| | |||| |||||| |||||||    
T  10757047 aaaacgatactgcctaaatagttaaaggacaaaaaatacaattta 10757091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 52609641 - 52609745
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||||||| |    
T  52609641 aaaatatgtaacagagagaaattaagggaccaaaataaatcgaattttaattaagggaccaaagcgatagtacctaaatagttaagggaccaaaaatgga 52609740  T
Q  210 attta 214  Q
    |||||    
T  52609741 attta 52609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 53310001 - 53310105
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagg-gaccaaaaatgca 209  Q
    |||||||||||  ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||    
T  53310001 aaaatgtgtaatggagagaagttaagggaccaaaataaatcaaattttaattaagagaccaaagtgatactacctaaataattaggagactaaaaatgca 53310100  T
Q  210 attta 214  Q
    |||||    
T  53310101 attta 53310105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 17102616 - 17102735
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| |||||||||||||||||||||| ||||||| ||| ||||| | ||| ||||||||||||| |||||||| |||||||||||||| ||||  ||||    
T  17102616 aaaaactaacgtttttgaattaaaactaacggaaaggaccaaaatctataagagagagaagttaaaggaccaaaataaatcgaattttatttaatggacc 17102715  T
Q  171 aaagtgatactacctaaata 190  Q
    |||| |||||||||||||||    
T  17102716 aaagcgatactacctaaata 17102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 206
Target Start/End: Original strand, 45871929 - 45872064
Alignment:
Q  72 aaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacca 171  Q
    ||||| |||| |||| |||||||||| ||||||| |||  |||||| |||| ||||||| |||||| |||||| |||||||||||||||||||| |||||    
T  45871929 aaatccaacgctttttaattaaaactaacggaaaggacccaaatgtataacggagagaatttaaggaaccaaaataaatcgaattttaattaagggacca 45872028  T
Q  172 aagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    ||  |||||||||||||||||| |||||||||||||    
T  45872029 aaacgatactacctaaatagttaagggaccaaaaat 45872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 218
Target Start/End: Original strand, 28691364 - 28691500
Alignment:
Q  83 ttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    ||||||||||||||| || |||| ||| |||||||||||||||||||||||||  || |||| |||||| |||||||||| || ||| |||| |||||||    
T  28691364 ttttgaattaaaactaacagaaaagaccaaaatgtgtaacagagagaagttaaatgatcaaaataaatcaaattttaatttagggacaaaagcgatacta 28691463  T
Q  183 cctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    |||||||| || |||||| |||||| |||||||||||    
T  28691464 cctaaataattaagggacaaaaaatacaatttaacct 28691500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 2078708 - 2078862
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||| |||||| |||||||||||||| || |||| |||||||||||||||  ||||| ||||||||  |||||| |||||| |||||||||||||     
T  2078708 aagaaaatttaacgtgtttgaattaaaactaacagaaaagactaaaatgtgtaagaagaga-aagttaagataccaaaataaatcaaattttaattaagg 2078806  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||||||| |||| ||  ||||||||| |||||| |||||| ||||||||||||||    
T  2078807 gaccaaagcgatattaattaaatagttaagggactaaaaatacaatttaacctttt 2078862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 9028427 - 9028574
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |||||||  |||||||||| ||||  ||||||||||| |||||||| ||||| |||||||||||||  |    
T  9028427 aagaaaacctaacgtttttgaattaaaactaacggaaaaaactaaaatgtataacgaagagaagttaaaggaccaaaataaattgaattttaattaaagg 9028526  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   |||||| || ||||||| | | |||||||||||||||||    
T  9028527 accaaaacaatactagcttaatagttaatgaaccaaaaatgcaattta 9028574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 22355077 - 22354946
Alignment:
Q  83 ttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    ||||||||||||| | ||||||| ||| ||||||||||||| ||| |||||||||||||||| |||||| ||||||||||||   ||||||  |||||||    
T  22355077 ttttgaattaaaattaacggaaaggaccaaaatgtgtaacacagaaaagttaagggaccaaaataaatcaaattttaattaaagaaccaaaacgatacta 22354978  T
Q  183 cctaaatagtt-agggaccaaaaatgcaattt 213  Q
    ||||||||||| |||||| |||||| ||||||    
T  22354977 cctaaatagttaagggactaaaaatacaattt 22354946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 2829558 - 2829408
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaag-ggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||| |||||||||||||||||  | |||| ||| ||||||| ||||||||||||||||||   |||||| |||||| ||| |||||||||     
T  2829558 aagaaaacctaatgtttttgaattaaaactagcagaaaagaccaaaatgtttaacagagagaagttaagaaaaccaaaataaatcaaatgttaattaaga 2829459  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaac 216  Q
    |||||||   ||||||||||||||||| ||||||||||||| |||||||||    
T  2829458 gaccaaaacaatactacctaaatagttaagggaccaaaaatacaatttaac 2829408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 17274012 - 17274166
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||| | ||||||   || ||||||||||||   ||||| ||||| ||||||| ||| |||||||||||||||  |    
T  17274012 aagaaaacctaacatttttgaattaaaaataacggaatgaaccaaaatgtgtaacgatgagaaattaagagaccaaaataattcgaattttaattaaaag 17274111  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||| |||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  17274112 accaaagcgatactacctaaatagttaaaggaccaaaaatacaatttaacttttt 17274166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 40639267 - 40639114
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||||  ||||||||||| ||||| |||||  ||||| ||||||||  |||||| |||||| |||||||||||||     
T  40639267 aagaaaatctaacgtttttgaattaaaaccaacggaaatgaccaaaatttgtaaggagaga-aagttaagataccaaaataaatcaaattttaattaagg 40639169  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||  |||||||  ||||||||| | | || ||||||||||||||||||||    
T  40639168 gaccaaaacgatactaattaaatagttaaagaactaaaaatgcaatttaaccttt 40639114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 29248460 - 29248343
Alignment:
Q  77 taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtg 176  Q
    ||||||||||||||||||||| | | ||| ||| ||||||||||||||||||||||||||| |||||| |||||  ||||||||||||| ||| |||  |    
T  29248460 taacgtttttgaattaaaactaatgaaaaggaccaaaatgtgtaacagagagaagttaaggaaccaaaataaattaaattttaattaagggactaaaacg 29248361  T
Q  177 atactacctaaatagtta 194  Q
    |||| |||||||||||||    
T  29248360 ataccacctaaatagtta 29248343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 33812843 - 33812722
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggg 197  Q
    ||||||||||| |||||||||||| || ||||||||| ||| |||| |||||| ||||||||||||   |||||||  ||||||||||||||||| ||||    
T  33812843 acggaaatgacgaaaatgtgtaacggatagaagttaaaggatcaaaataaatcaaattttaattaaagaaccaaagcaatactacctaaatagttaaggg 33812744  T
Q  198 accaaaaatgcaatttaacctt 219  Q
    |||||||||| |||||||||||    
T  33812743 accaaaaatgaaatttaacctt 33812722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21169826 - 21169959
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca--------taagaaaatctaacgtttttgaatta 92  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||         || |||||||||| |||||||||||    
T  21169826 ctcctatttttcatattcatatcatcttcatcaaccttcaacaacaagattcccagaaaaatttcagaaaaaatcaaaaaaatctaacttttttgaatta 21169925  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagag 126  Q
    ||||| |||||||  || ||||||||||||||||    
T  21169926 aaactaacggaaagaaccaaaatgtgtaacagag 21169959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 51311813 - 51311685
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaa---------tctaacgtttttgaattaaa 94  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||         ||||||||||||||||||||    
T  51311813 ctcttcttcatcttcatatcatctccatcaacctttaacaacaacaatcccagaaaaatttcagaagaaaatgaagaaactctaacgtttttgaattaaa 51311714  T
Q  95 acttacggaaatgactaaaatgtgtaaca 123  Q
    ||| ||||||| ||| |||||| ||||||    
T  51311713 actaacggaaaagaccaaaatgcgtaaca 51311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 194
Target Start/End: Original strand, 5348732 - 5348930
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||| ||||| |||||||||||||||||||||||||||||| | ||||   |||||||| || ||||| ||         ||||||||||||||||||||    
T  5348732 tcttcttcatcttcatatcatctccatcaaccttcaacaactaaaatctgcgaaaaattccagaagaatatgaagaaaacctaacgtttttgaattaaaa 5348831  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
    |  ||||||| ||| ||||| |||||| |||| |||||||   |||||| |||||| ||||||||||| | |||||||| |||||||  ||||||||||    
T  5348832 cacacggaaaggaccaaaatatgtaacggagaaaagttaaaataccaaaataaatcaaattttaattacgggaccaaagcgatactaattaaatagtta 5348930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7937789 - 7937715
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||    
T  7937789 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaattccagaagaaaat 7937715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 46766863 - 46766997
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatac 180  Q
    ||||| |||||||||| ||| ||||||| |||||||||||| ||||||| ||||||  || ||| |||||| ||||||||||||| |||||||| |||||    
T  46766863 ttttttaattaaaactaacgtaaatgaccaaaatgtgtaacggagagaaagttaagatacaaaaataaatcaaattttaattaagggaccaaagcgatac 46766962  T
Q  181 tacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || | |||||||| ||||||||||||| |||||||    
T  46766963 tagcaaaatagttaagggaccaaaaatacaattta 46766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 54247422 - 54247496
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  54247422 ctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatccctgaaaaatttcagaagaaaat 54247496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 212
Target Start/End: Complemental strand, 35753489 - 35753408
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||||||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||    
T  35753489 ttaagggaccaaaataaatcgaattttaattaagaaaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatt 35753408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 43527144 - 43527068
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    |||||||||||| |||||||||| |||||| ||||||||||| |||||||||| |||||||||||||||||||||||    
T  43527144 aagaaaatctaatgtttttgaatcaaaactaacggaaatgaccaaaatgtgtaccagagagaagttaagggaccaaa 43527068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 51885528 - 51885751
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||||         ||||||||||||||||||||    
T  51885528 tcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccaagaaatattccataagaaaatgaagaaaacctaacgtttttgaattaaaa 51885627  T
Q  96 cttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    || ||||||| |   ||||| |||||  ||||| ||| ||||  |||||| |||||| ||||||||||||  |||||||  |||| ||  |||||||||     
T  51885628 ctgacggaaagggtcaaaatatgtaagaagaga-aagctaagataccaaaataaatcaaattttaattaaaggaccaaaacgatattaattaaatagtta 51885726  T
Q  194 agggaccaaaaatgcaatttaacct 218  Q
    ||||||||||||   ||||||||||    
T  51885727 agggaccaaaaacataatttaacct 51885751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 22444422 - 22444527
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||| ||||| ||||||||||| |   ||| ||| ||||| ||||||||||||||||||||| ||| || |||||||||||||||||||| |    
T  22444422 aagaaaatctaatgttttcgaattaaaactaaacaaaaggaccaaaatatgtaacagagagaagttaaggaaccgaaataaatcgaattttaattaaggg 22444521  T
Q  168 accaaa 173  Q
    ||||||    
T  22444522 accaaa 22444527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 41998055 - 41998197
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacg-----gaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaatt 162  Q
    ||||||| |||||||||||||||||||||| |||     |||||||| |||||||||||  ||||||||||| |||| ||||          ||||||||    
T  41998055 aagaaaacctaacgtttttgaattaaaactaacgtaacggaaatgaccaaaatgtgtaatggagagaagttaggggatcaaa----------ttttaatt 41998144  T
Q  163 aagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41998145 aagggaccaaagtgatactacctaaatagttaagggaccaaaaatacaattta 41998197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 33773026 - 33773174
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||| |||||||||||| |||||||||  ||||||| ||| ||||| || ||||||||| || |||||  |||||| |||||| ||||||||| |||     
T  33773026 aagaaactctaacgtttttaaattaaaaccaacggaaacgaccaaaatatggaacagagagaaaattaagataccaaaataaatcaaattttaatcaagg 33773125  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    || |||||||||||||  ||||||||| ||||||||||||  |||||||    
T  33773126 gatcaaagtgatactaattaaatagttaagggaccaaaaacacaattta 33773174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 43527148 - 43527291
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaattaaa 94  Q
    |||||||| || || |||||||||||||||||||||||||||||||||| |||||||||| ||          |||||||  ||| ||| ||||||||||    
T  43527148 ctcttttttatctttatatcatctccatcaaccttcaacaacaagaatcacagaaaaattccaaaaaaaaatgaagaaaacataatgttcttgaattaaa 43527247  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaaggga 139  Q
    ||| ||||||| ||| ||||||||||||| |||||||||||||||    
T  43527248 actaacggaaaggaccaaaatgtgtaaca-agagaagttaaggga 43527291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 218
Target Start/End: Original strand, 47891749 - 47891900
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| |||||||||||  ||||| ||||||||   ||||| |||||  |||||||||||||     
T  47891749 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaaggagaga-aagttaagatgccaaaataaattaaattttaattaagg 47891847  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||||  ||||||  ||||||||| | ||| |||||||| ||||||||||    
T  47891848 gaccaaagcaatactaattaaatagttaaaggaacaaaaatggaatttaacct 47891900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 21918637 - 21918494
Alignment:
Q  77 taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    ||||||||||||||||||||| ||| ||| ||  |||||||||||  |||| || ||||||  || |||  ||||| |||||||||| || |||||||||    
T  21918637 taacgtttttgaattaaaactaacg-aaaggatcaaaatgtgtaag-gagataaagttaagatacaaaaaaaaatcaaattttaatttagggaccaaagt 21918540  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||    
T  21918539 gatactaattaaatagttaagggaccaaaaatgcaatttaaccttt 21918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 21918657 - 21918753
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaact 97  Q
    |||| ||| ||||| ||||||||||||| |||||||||||||||||| ||||| | ||||||| || || ||||| ||||| |||||||||||||||    
T  21918657 ctccccttcttcatcttcatatcatctctatcaaccttcaacaacaaaaatccgaaaaaaattccagaaaaaaatttaacggttttgaattaaaact 21918753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 53678669 - 53678795
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||||||||||||| ||||||  |||||||  || |||||||||||  ||||||| ||||||  |||||| |||||| |||||||||||||     
T  53678669 aagaaaacctaacgtttttgaactaaaaccaacggaaagaaccaaaatgtgtaag-gagagaaagttaagataccaaaataaatcaaattttaattaagg 53678767  T
Q  167 gaccaaagtgatactacctaaatagtta 194  Q
    |||||||| |||||||  ||||||||||    
T  53678768 gaccaaagcgatactaattaaatagtta 53678795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 49222263 - 49222387
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| | | ||||||| ||||| ||| ||| | ||||| |||||||||||| || ||| || ||||| |||| |    
T  49222263 aagaaaatctaacgtttttgaattaaaactaatgaaaatgaccaaaatatgtgacatatagaaggtaagggaccaaa-tagatc-aaatttaactaaggg 49222360  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    ||||||  ||||||| |||||||||||    
T  49222361 accaaaacgatactatctaaatagtta 49222387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 49529086 - 49529203
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
    ||||||| ||||||||   ||||||||||||| || ||||||||||| |||||| ||||||| ||| | |||||||  |||||||  ||||||||| |||    
T  49529086 acggaaaggactaaaagtagtaacagagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagg 49529185  T
Q  197 gaccaaaaatgcaattta 214  Q
    ||||||||||||||||||    
T  49529186 gaccaaaaatgcaattta 49529203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 220
Target Start/End: Complemental strand, 54247378 - 54247269
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggaccaaaaatgcaa 210  Q
    |||||||||||  || |||||||||||||||||| |||||| ||||||||| ||  |||||||| |||||||  |||||||||| ||   ||||||||||    
T  54247378 aaaatgtgtaatggaaagaagttaagggaccaaaataaatcaaattttaatcaatggaccaaagcgatactatttaaatagttaagggataaaaatgcaa 54247279  T
Q  211 tttaaccttt 220  Q
    |||| |||||    
T  54247278 tttagccttt 54247269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 2078698 - 2078519
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||| ||||| ||||||| ||||| |||||| ||||||||||| ||| | |||| ||  | |  |||||| ||||||||||||||| |||||| |     
T  2078698 ctcctcttcttcatcttcatattatctctatcaactttcaacaacaaaaattcgagaagaaaatga--agaaaacctaacgtttttgaatcaaaactaat 2078601  T
Q  101 ggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    ||||| ||| |||||||||||  ||||| ||||||||  | |||| |||||| ||||||| ||||| ||||| || |||||||    
T  2078600 ggaaaggaccaaaatgtgtaagaagaga-aagttaagatatcaaaataaatcaaattttatttaagggaccagagcgatacta 2078519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 214
Target Start/End: Complemental strand, 7937713 - 7937646
Alignment:
Q  148 aatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||  |||||||||||||||||    
T  7937713 aatcgaattttaattaagggaccaaagcgatactacctaaatagttaagcaaccaaaaatgcaattta 7937646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 22444412 - 22444299
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaatt 91  Q
    ||||| |||||||| |||||||||||||||||||| |  |||||||||||||||| ||||||| ||          ||||||| ||||||||||||||||    
T  22444412 ctcctatttttcatcttcatatcatctccatcaacatataacaacaagaatcccataaaaattccagaaaaaaatgaagaaaacctaacgtttttgaatt 22444313  T
Q  92 aaaacttacggaaa 105  Q
    |||||| |||||||    
T  22444312 aaaactaacggaaa 22444299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 52268254 - 52268177
Alignment:
Q  68 aagaaaatctaacgtttt-tgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    ||||||| |||||||||| | |||||||||| ||| ||||||| |||||||||||  |||||||||||||||||||||    
T  52268254 aagaaaaactaacgttttataaattaaaactaacgaaaatgaccaaaatgtgtaagtgagagaagttaagggaccaaa 52268177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 4846745 - 4846670
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaa 144  Q
    ||||||||  ||||||||||||||||| || | ||||| ||| ||||||||||| ||||||||||||||||||||||    
T  4846745 aagaaaattcaacgtttttgaattaaa-ctaatggaaaggaccaaaatgtgtaagagagagaagttaagggaccaaa 4846670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 38911497 - 38911601
Alignment:
Q  111 aaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgca 209  Q
    ||||||||||||||||| ||||||| | |||||| |||||||||||||||||||  |||||||   ||| |||||||||| || | |||| |||||| ||    
T  38911497 aaaatgtgtaacagagaaaagttaatgaaccaaaataaatcgaattttaattaaaggaccaaaacaatattacctaaataattaaaggacaaaaaataca 38911596  T
Q  210 attta 214  Q
    |||||    
T  38911597 attta 38911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 214
Target Start/End: Original strand, 13866964 - 13867047
Alignment:
Q  132 ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||| |||||| ||||||| ||| | |||||||  |||||||  ||||||||| |||||||||||||||||||||    
T  13866964 ttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagggaccaaaaatgcaattta 13867047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 44316746 - 44316630
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta-gg 196  Q
    ||||||| ||||||||   ||||||||||||| || ||||||||||| |||||| ||||||| ||| | ||| |||  |||||||  |||||||||| ||    
T  44316746 acggaaaggactaaaagtagtaacagagagaaatttaagggaccaaa-taaatcaaattttagttaggggactaaaccgatactaattaaatagttaagg 44316648  T
Q  197 gaccaaaaatgcaattta 214  Q
    ||||||||||||||||||    
T  44316647 gaccaaaaatgcaattta 44316630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 588394 - 588534
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||| ||||| |||||||||| ||| ||| ||| |||||||||||||||||| || |||||  ||||||  ||||| |||||||||||||  ||| |||    
T  588394 ctaacattttttaattaaaactaacgtaaaggaccaaaatgtgtaacagagagaaaattaagataccaaaacaaatcaaattttaattaaggaaccgaag 588493  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     |||| ||  ||||||||| ||  | |||||||||||||||    
T  588494 cgatattaattaaatagttaagatatcaaaaatgcaattta 588534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 214
Target Start/End: Original strand, 33812842 - 33812926
Alignment:
Q  131 gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| || |||| |||||| ||||||||||||| ||| |||| ||||||||||||||| || || ||||||||||| ||||||    
T  33812842 gttaagagatcaaaataaatcaaattttaattaagggactaaagcgatactacctaaatatttaagagaccaaaaatgaaattta 33812926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 50259250 - 50259110
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||||||||| |||||||  | | | ||||||  ||||||||||||| |||||| |||||||||||||| ||| || || |||| ||||| |||||||     
T  50259250 ctaacgttttttaattaaatttaaagaaaatgatcaaaatgtgtaacaaagagaaagttaagggaccaaaataattcaaaatttagttaagggaccaaac 50259151  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     || || |  ||||||||| |||||||||||||| ||||||    
T  50259150 cgaaaccaattaaatagttaagggaccaaaaatgtaattta 50259110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 22444296 - 22444237
Alignment:
Q  129 aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaa 188  Q
    ||||||||||| |||| |||||||||||||||||||  |||||||  |||||||||||||    
T  22444296 aagttaagggagcaaaataaatcgaattttaattaatggaccaaatcgatactacctaaa 22444237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 50393437 - 50393370
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||| |||||| || |||| |||||    
T  50393437 acggaaatgaccaaaacgtgtaacagagagaaagttaagggaccaaaataaatcaaaatttagttaag 50393370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 51883948 - 51883862
Alignment:
Q  129 aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||  |||||| |||||  ||||||||||||| |||||||| |||||||  ||||||||| |||||  ||||||||||||||    
T  51883948 aagttaagataccaaaataaattaaattttaattaagggaccaaagcgatactaattaaatagttaagggattaaaaatgcaattta 51883862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 33773013 - 33772973
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaa 44  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  33773013 ctcttcttcatcttcatatcatctccatcaaccttcaacaa 33772973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 51311825 - 51311901
Alignment:
Q  139 accaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| |||||| ||||||||||||| |||||||| |||||||  ||||||||| |  ||||||||||| ||||||    
T  51311825 accaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaacagaccaaaaatgtaattta 51311901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 20963547 - 20963670
Alignment:
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    ||||||| ||||||| ||||||||   ||||||||||| || |||| |||||||| |||||| ||||||| |||   || ||||  |||||||  |||||    
T  20963547 taaaactaacggaaaggactaaaagaagtaacagagagaaacttaaaggaccaaaataaatcaaattttagttagaggatcaaaccgatactaattaaat 20963646  T
Q  190 agtt-agggaccaaaaatgcaatt 212  Q
    |||| |||||||||||| ||||||    
T  20963647 agttaagggaccaaaaaggcaatt 20963670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10756933 - 10756899
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaac 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  10756933 ctcctctttttcatcttcatatcatctccatcaac 10756899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 214
Target Start/End: Complemental strand, 43527080 - 43527026
Alignment:
Q  161 ttaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||| |||||||  |||||||||||||||||| ||||| |||||||||||||||    
T  43527080 ttaagggaccaaatcgatactacctaaatagttaagggatcaaaaatgcaattta 43527026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 43844359 - 43844461
Alignment:
Q  93 aaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    ||||| ||||||||||| |||||||||||| ||||| || |||| |||| ||| |||||| | ||||| ||| | |||||||  |||||||  |||||||    
T  43844359 aaactaacggaaatgaccaaaatgtgtaacggagagaaatttaaaggacaaaaataaatcaatttttagttaggggaccaaaccgatactaattaaatag 43844458  T
Q  192 tta 194  Q
    |||    
T  43844459 tta 43844461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 52606354 - 52606383
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaact 97  Q
    ||||||||||||||||||||||||||||||    
T  52606354 aagaaaatctaacgtttttgaattaaaact 52606383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 165
Target Start/End: Complemental strand, 12991478 - 12991394
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||| |||||||  | ||||||||||  |||||||||||||||||| |||||||| ||||||| | |||| || |||| |||||    
T  12991478 ttttttaattaaatttaacggaaatgatcaaaatgtgtaacagagagaaagttaagagaccaaaatcaatcaaaatttagttaag 12991394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 17102546 - 17102578
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaac 35  Q
    |||||||||||| ||||||||||||||||||||    
T  17102546 cctctttttcatcttcatatcatctccatcaac 17102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #132
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 37174763 - 37174715
Alignment:
Q  79 acgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagaga 127  Q
    |||||||| |||||||  | |||||||||||||||||||||||| ||||    
T  37174763 acgttttttaattaaatttaacggaaatgactaaaatgtgtaacggaga 37174715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 29864336 - 29864558
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaa--------atctaacgtttttgaatta 92  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | || |||        |||||||||||||||||||    
T  29864336 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaaaaaatgaataaaatctaacgtttttgaatta 29864435  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||| ||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  29864436 aaactaacggaaaagaccaaaatgtgtaacagatagaagttaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagt 29864535  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | ||||||||||||| |||||||    
T  29864536 taagggaccaaaaatacaattta 29864558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 52915178 - 52914955
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||         ||||||||||||||||    
T  52915178 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaagtgccagaagaaaatgaagaaaacctaacgtttttgaatt 52915079  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | || |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  52915078 aaaattaaccgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 52914979  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||||| |||||||    
T  52914978 ttaagggaccaaaaatacaattta 52914955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 1157366 - 1157592
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||         ||||||||||||||||    
T  1157366 ctcctctttttcatcttcatataatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaatt 1157465  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| ||||||| |||||||||||| |||| |||||||||||||||| |||||||||||||||||||  |||||||| ||||||||||||||||    
T  1157466 aaaactaacgaaaatgaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatag 1157565  T
Q  192 tt-agggaccaaaaatgcaatttaacc 217  Q
    || |||||| |||||| ||||||||||    
T  1157566 ttaagggactaaaaatacaatttaacc 1157592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43317039 - 43317262
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||         ||||||||||| ||||    
T  43317039 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaatttcagaagaaaatgaaggaaacctaacgtttttcaatt 43317138  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||||||| ||| ||||||||||| ||||||||||||| |||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  43317139 aaaattaacggaaaggaccaaaatgtgtaatagagagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatag 43317238  T
Q  192 ttagg-gaccaaaaatgcaattta 214  Q
    ||||| ||| ||||||||||||||    
T  43317239 ttaggagactaaaaatgcaattta 43317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 4793759 - 4793989
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca---------taagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||| ||| |         |||||||| ||||||||||||||||    
T  4793759 ctcctctttttcatcttcatattatctccatcaaccttcaacaacaagaatcctagaaaatttttaaaaggaaattaagaaaacctaacgtttttgaatt 4793858  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||  |||||||||||||||     
T  4793859 aaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaaacgatactacctaaataa 4793958  T
Q  192 ttagggaccaaaaatgcaatttaacctttta 222  Q
    | ||||  ||||||| |||||||||||||||    
T  4793959 taaggggtcaaaaatacaatttaacctttta 4793989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 28570590 - 28570804
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||| | |||||||| |||||||||||||||||||||||||||||||||| || | ||| |||| || ||||| |||| |||||||||||||||| ||    
T  28570590 ctcctcatattcattttaatatcatctccatcaaccttcaacaacaagaatctcaaataaaattcagaaaaaaatttaacttttttgaattaaaactaac 28570689  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||| || ||     
T  28570690 ggaaatgaccaaaatgtgtaacagatagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaagtgataccacctaaatagttaagtgat 28570789  T
Q  200 caaaaatgcaattta 214  Q
    |||||||||||||||    
T  28570790 caaaaatgcaattta 28570804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 45911739 - 45911964
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||     |||||||||||||||||||| ||||         ||||||||||||||| ||||    
T  45911739 ctcctctttttcatcttcatatcatctccatcaaccttcaa-----agaatcccagaaaaatttcagaagaaaatgaagaaaatctaacgtttttaaatt 45911833  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  45911834 aaaactaacggaaaagaccaaaatgtgtaacagagagaagataagagaccaaaataaatcgaattttaattaagggaccaaagtgatactacctaaatag 45911933  T
Q  192 tta-gggaccaaaaatgcaatttaacctttt 221  Q
    ||| |||||||||||| ||||||| ||||||    
T  45911934 ttaggggaccaaaaatacaatttagcctttt 45911964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 29970418 - 29970195
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||    
T  29970418 ctcctctttttcatcttcataacatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatgaagaaagcctaacgtttttgaatt 29970319  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||| | ||| |||||||||||| |||| ||||||| | |||||| |||||| ||||||||||||| || ||||| ||||||||||||||||    
T  29970318 aaaactaacggataagaccaaaatgtgtaacggagataagttaatg-accaaaataaatcaaattttaattaagggatcaaagcgatactacctaaatag 29970220  T
Q  192 tta-gggaccaaaaatgcaatttaa 215  Q
    ||| |||||||||||||||||||||    
T  29970219 ttatgggaccaaaaatgcaatttaa 29970195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 40067509 - 40067731
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||         |||||||||||||||||    
T  40067509 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaatta 40067608  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||| ||||||| ||||||||||||||  ||||||||||| |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||    
T  40067609 aaactaacgaaaatgaccaaaatgtgtaacaggaagaagttaaggaaccaaaataaattgaattttagttaagggaccaaagcgatactacctaaatagt 40067708  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | ||||| ||||||| |||||||    
T  40067709 taagggatcaaaaatacaattta 40067731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 4966091 - 4965895
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat------ctaacgtttttgaattaaaact 97  Q
    |||||||| || ||||||||||||||||||| |||||||||| ||||| ||||||||||| || ||||||||      ||||||||||||||||||||||    
T  4966091 ctctttttaatcttcatatcatctccatcaatcttcaacaacgagaattccagaaaaattccagaagaaaatgaaaacctaacgtttttgaattaaaact 4965992  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta 194  Q
     ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || ||||| |||||||||||||||||||    
T  4965991 aacggaaatgaccaaaatgtgtaacagagagaagttaagggatcaaaataaatcgaattttaattaagggagcaaagcgatactacctaaatagtta 4965895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21218073 - 21217845
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||  | ||||||||         |||||| |||||||||    
T  21218073 ctcctctttttcatcttcatatcatctccatcaaccttcaaccacaagaatcccaaaaaaattctagaagaaaatgaagaaaacctaacgcttttgaatt 21217974  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| |||  || |||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  21217973 aaaactaacgaaaagaaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 21217874  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||||||||||||||||||| ||||    
T  21217873 ttaagggaccaaaaatgcaatttagcctt 21217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 34958991 - 34959219
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||||||         ||||| ||||||||||    
T  34958991 ctcctctttttcatcttcatatcatctccatcaaccttgaacaacaaaaatcccagaaaaaatacataagaaaatgaagaaaacctaacatttttgaatt 34959090  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||| | |||||| ||||||||||||||||||||  ||||||| |||| |||||||||||    
T  34959091 aaaactaacggaaatgaccaaaatgtgtaacagaaagaaattaaagaaccaaaataaatcgaattttaattaaggaaccaaagcgataatacctaaatag 34959190  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||||||||| ||||||||||||||    
T  34959191 ttaagggaccaaaattgcaatttaacctt 34959219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 25218244 - 25218446
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| || || ||||         ||||||||||||||||||||    
T  25218244 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctaaaaaagttccagaagaaaatgaagaaaatctaacgtttttgaatt 25218343  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||  |||||||  ||||||||||||||||    
T  25218344 aaaactaacggaaatgaccaaaatgtgtaacagagagaagttaatggaccaaaataaatcgaattttaattaaaggaccaaaacgatactacctaaatag 25218443  T
Q  192 tta 194  Q
    |||    
T  25218444 tta 25218446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 1205603 - 1205379
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||         | || |||||| ||||    
T  1205603 ctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaatttcagaagaaaatgaagaaaacccaatgttttttaatt 1205504  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||| |||||   |||||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  1205503 aaaactaacggcaatgatcgaaatgtgtaacagaga-aagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 1205405  T
Q  192 tt-agggaccaaaaatgcaatttaac 216  Q
    || ||||||||||| |||||||||||    
T  1205404 ttaagggaccaaaagtgcaatttaac 1205379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24504100 - 24504335
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||||||  | ||||||||         ||||||||||||||||    
T  24504100 ctcctttttttcatcttcatatcatctccatcaactttcaacaacaagaatttcagaaaaattcaagaagaaaatgaagaaaaactaacgtttttgaatt 24504199  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||| |||  |||| |||||||||||    
T  24504200 aaaactaatggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaaggactaaaacgatattacctaaatag 24504299  T
Q  192 tt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    || |||||||||||||| |||||||||||| |||||    
T  24504300 ttaagggaccaaaaatgtaatttaacctttaatttt 24504335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 25059059 - 25058832
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||  || ||||||||         ||||||||||||||||    
T  25059059 ctcctcttttttatcttcatatcatctccatcaaccttcaacaacgagaatcctagaaaaataccagaagaaaatgaagaaaagctaacgtttttgaatt 25058960  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||  ||||||||||||| |||||||||||| ||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  25058959 aaaactaacggaaaggagcaaaatgtgtaacatagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatag 25058860  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || || ||| ||||||||||||||||||    
T  25058859 ttaagagacaaaaaatgcaatttaacct 25058832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 4 - 213
Target Start/End: Original strand, 33882112 - 33882331
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||||| | || ||||||||         ||||||||||||||||||     
T  33882112 ctctttttcatcttcatatcatctccatcaaacttcaacaacaagaatccaaaaaaaaatccagaagaaaatgaagaaaacctaacgtttttgaattaag 33882211  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| ||||||| ||| |||||||||||| |||| |||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||||||||     
T  33882212 actaacggaaaggaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagtta 33882311  T
Q  194 agggaccaaaaatgcaattt 213  Q
    ||||||||||||||||||||    
T  33882312 agggaccaaaaatgcaattt 33882331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 33626090 - 33625868
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||  | | |||||| ||||||||| |||||||||| ||||||| || ||||||||         ||||||||||||||||    
T  33626090 ctcctctttttcatcttcatattgttttcatcaaacttcaacaataagaatcccataaaaattccagaagaaaatgaagaaaacctaacgtttttgaatt 33625991  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  33625990 aaaattaacggaaatgaccaaaatgtgtaacagagataagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 33625891  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || ||||||||||||||||||||    
T  33625890 ttaagggaccaaaaatgcaattt 33625868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 44710563 - 44710785
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||         ||||||||| ||||||||||    
T  44710563 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagtatcctagaaaaattccagaagaaaatgaagaaaatctaacttttttgaatt 44710662  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||  ||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||  |||||||| ||||||     
T  44710663 aaaaccaacgaaaaggactaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaggaaccaaaacgatactacataaatac 44710762  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || ||||| ||||||||||||||    
T  44710763 ttaagggatcaaaaatgcaattt 44710785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 27347821 - 27347608
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaa 93  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||         ||||||||||||||||||    
T  27347821 cctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaa 27347722  T
Q  94 aacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt- 192  Q
    |||| | ||||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||  |||||||| ||||||| |||||||||     
T  27347721 aactaatggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactatctaaatagtc 27347622  T
Q  193 tagggaccaaaaat 206  Q
     |||||||||||||    
T  27347621 aagggaccaaaaat 27347608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 38866624 - 38866401
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaa-tttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||         || | |||||||||||    
T  38866624 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaaatttcataagaaaatgaagaaaacctgaggtttttgaatt 38866525  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| |||||||||||| |  ||||||||||| |||||| |||||| ||||||| ||||  |||||||| ||||||||||||||||    
T  38866524 aaaactaacggaaatgaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcaaattttagttaatggaccaaagcgatactacctaaatag 38866425  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||||| |||||||    
T  38866424 ttaagggaccaaaaatacaattta 38866401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 46621153 - 46620926
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||  | |||||||||||||||||| |||||||||| ||||||| || || |||||         ||||||||||||||||    
T  46621153 ctcctctttttcatcttcatattgtttccatcaaccttcaacaataagaatcccataaaaattccagaaaaaaatgaagaaaacctaacgtttttgaatt 46621054  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||||||||||| |||||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||   |||||||||||||||    
T  46621053 aaaaataacggaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacaatactacctaaatag 46620954  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || |||||||||||||||||||| ||||    
T  46620953 ttaagggaccaaaaatgcaatttgacct 46620926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 21218089 - 21218230
Alignment:
Q  74 atctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  21218089 atctaacgtttttgaattaaaactaactgaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaa 21218188  T
Q  174 gtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | |||||||||||||||||| ||||| |||||||||||||||    
T  21218189 gcgatactacctaaatagttaagggatcaaaaatgcaattta 21218230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 45683277 - 45683500
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||    
T  45683277 ctcctctttttcatcttcatatcatctccaccaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttgaatt 45683376  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||| ||| |||||||||||| |||| ||||||| |||||||| |||||| ||||||| |||||  |||||||  ||| |||||||||||    
T  45683377 aaaactaaccgaaaggaccaaaatgtgtaacggagataagttaaaggaccaaaataaatcaaattttagttaaggaaccaaagcaatattacctaaatag 45683476  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||| ||||||||| |||||||    
T  45683477 ttaaggaaccaaaaatacaattta 45683500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 45911729 - 45911579
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  45911729 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 45911630  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||| |||||||||||||||||| | | ||||||||||||||||||||    
T  45911629 accaaagcgatactacctaaatagttaatgaaccaaaaatgcaatttaacc 45911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 68 - 221
Target Start/End: Complemental strand, 54136241 - 54136087
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||| |||||||||||||||||||| |    
T  54136241 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacagagagaaattaaaggatcaaaataaatcgaattttaattaaggg 54136142  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||    
T  54136141 accaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagcctttt 54136087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 9010665 - 9010893
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| || ||||||| | ||||||||||||||||||||||||||||||||||| ||  |||||||         || | |||||||||||    
T  9010665 ctcctatttttcatctttatatcattttcatcaaccttcaacaacaagaatcccagaaaaattccaatagaaaatgaagaaaaccttatgtttttgaatt 9010764  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||||| | || ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  9010765 aaaactaacggaagtaaccaaaatatgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagagatactacctaaatag 9010864  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || |||||||||||||  |||||| ||||    
T  9010865 ttaagggaccaaaaatataatttagcctt 9010893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 33626100 - 33626247
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |    
T  33626100 aagaaaacctaacgttttttaattaaaactaacggaaaagaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaggg 33626199  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  33626200 accaaagcgatactacctaaatagttaagggaccaaaaatgaaattta 33626247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 46200645 - 46200868
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||         |||||| |||||||||    
T  46200645 ctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttgaatt 46200744  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||| |||  || |||||| |||||  | |||||||||| ||||||| ||||| |||||||||||||| |||||||| | ||||||||||||||    
T  46200745 aaaactaacgaaaagaaccaaaatgcgtaacgaaaagaagttaagagaccaaaataaattgaattttaattaagggaccaaagcgttactacctaaatag 46200844  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||||||||||    
T  46200845 ttaagagaccaaaaatgcaattta 46200868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 25218234 - 25218084
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || |||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |    
T  25218234 aagaaaacctaacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacagagagaagttaagggactaaaataaatcgaattttaattaaggg 25218135  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||| |||| ||||||||||||| |||||||||||||| |||||||||    
T  25218134 accaaagcgatattacctaaatagttaagggaccaaaaatgaaatttaacc 25218084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 27347833 - 27347978
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |    
T  27347833 aagaaaatctaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaggg 27347932  T
Q  168 accaaagtgatactacctaaatagttagggacca-aaaatgcaatt 212  Q
    ||||||  ||||||||||||||||||| ||| || |||||||||||    
T  27347933 accaaatcgatactacctaaatagttaaggaacataaaatgcaatt 27347978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 3 - 220
Target Start/End: Original strand, 22830959 - 22831187
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaa 93  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||         ||||||||||||||||||    
T  22830959 cctcttcttcatcttcatatcatctccttcaaccttcaacaacaaaaatcccaggaaaatttcagaagaaaatgaagaaaccctaacgtttttgaattaa 22831058  T
Q  94 aacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    |||| ||||||| ||| |||||||||||  || || ||||||||  |||||| |||||| ||||||||||||| |||||||| ||||||| | |||||||    
T  22831059 aactaacggaaaggaccaaaatgtgtaatggatagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactagcaaaatagt 22831158  T
Q  193 t-agggaccaaaaatgcaatttaaccttt 220  Q
    | ||||||||||||| |||||||||||||    
T  22831159 taagggaccaaaaatccaatttaaccttt 22831187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 46200632 - 46200480
Alignment:
Q  71 aaaatctaacgtttttgaattaaaa-cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||||||||| ||| |||| || ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  46200632 aaaatataacgtttttaaataaaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggac 46200533  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  46200532 caaaatgatactacctaaatagttaagggaccaaaaatgcaatttagcctttt 46200480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 4 - 214
Target Start/End: Complemental strand, 46535745 - 46535526
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| || |||||         |||||||||||||||||||    
T  46535745 ctctttttcattttcatatgatctccatcaaccttcaacaacaagagtcccataaaaatttcagaaaaaaatgaagaaaacctaacgtttttgaattaaa 46535646  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| ||||||| ||| |||||||| |  ||| ||||  ||||| |||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||     
T  46535645 actaacggaaaggaccaaaatgtgaacgaga-agaaactaaggaaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagtta 46535547  T
Q  194 agggaccaaaaatgcaattta 214  Q
    ||||||||||||| |||||||    
T  46535546 agggaccaaaaatacaattta 46535526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 9010647 - 9010508
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||| ||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  9010647 ctaatgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagt 9010548  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||||||| || |||||||||||||||||||||    
T  9010547 gatactacctaaataattaagggaccaaaaatgcaattta 9010508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 10014624 - 10014842
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||         ||||||| ||||||||    
T  10014624 ctcctctttctcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaatt 10014723  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||| ||||||||| |||||||||||| || |||| |||||| ||||||||||||| ||||||   ||||||||||||||||    
T  10014724 aaaactaacggaaatgaccaaa-tgtgtaacaaagagaagttaagagatcaaaataaatcaaattttaattaagggaccaatacgatactacctaaatag 10014822  T
Q  192 tt-agggaccaaaaatgcaa 210  Q
    || |||||| ||||||||||    
T  10014823 ttaagggacaaaaaatgcaa 10014842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 10021765 - 10021983
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||         ||||||| ||||||||    
T  10021765 ctcctctttctcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaatt 10021864  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||| ||||||||| |||||||||||| || |||| |||||| ||||||||||||| ||||||   ||||||||||||||||    
T  10021865 aaaactaacggaaatgaccaaa-tgtgtaacaaagagaagttaagagatcaaaataaatcaaattttaattaagggaccaatacgatactacctaaatag 10021963  T
Q  192 tt-agggaccaaaaatgcaa 210  Q
    || |||||| ||||||||||    
T  10021964 ttaagggacaaaaaatgcaa 10021983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 44432860 - 44433006
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||| ||||||||||||||||| | ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||| |    
T  44432860 aagaaaatctgacgtttttgaattaaaattaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagttaaggg 44432959  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  44432960 accaaagtgatactatctaaatagttaagggaccaaaaatgcaattt 44433006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 46621163 - 46621317
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||| ||| |||||||||||||||||||| |||| |||||||| |||||||||||||| ||||  |    
T  46621163 aagaaaacctaacgttttttaattaaaactaacggaaaggaccaaaatgtgtaacagagagaaattaaaggaccaaaataaatcgaattttagttaaagg 46621262  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||    
T  46621263 accaaaacgatactacctaaatagttaagggaccaaaaatgcaatttaacctttt 46621317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 43317029 - 43316883
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||| |||||  ||||||||||||| |    
T  43317029 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagataagttaagggaccaaaataaataaaattttaattaaggg 43316930  T
Q  168 accaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||| |||||||| ||||||||||| |||||||    
T  43316929 accaaagcgatactaccttaatagttaaggaccaaaaatacaattta 43316883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 53645601 - 53645475
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| |    
T  53645601 aagaaaatctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaaccgaattttaattaaggg 53645502  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    ||||||| ||||||| |||||||||||    
T  53645501 accaaagcgatactatctaaatagtta 53645475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 37515689 - 37515842
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||| |||||||||||| |||||||||| | |||| |||| ||||||||||||| | |||||||||||||||||| |||||||||||||||||||| |    
T  37515689 aagaaagtctaacgttttttaattaaaactaatggaattgaccaaaatgtgtaacaaatagaagttaagggaccaaaataaatcgaattttaattaaggg 37515788  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||||||||||||||||| |||||| ||||||  ||||||||||||    
T  37515789 accaaagcgatactacctaaatagttaagggactaaaaataaaatttaaccttt 37515842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 36 - 222
Target Start/End: Original strand, 8246941 - 8247137
Alignment:
Q  36 cttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagag 126  Q
    |||||||||||||||| ||||||||||| || ||||||||         |||||||||||||||||||| | || |||||||| ||||||| |||  |||    
T  8246941 cttcaacaacaagaattccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaattaaaaataacagaaatgacgaaaatgtttaagggag 8247040  T
Q  127 agaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttta 222  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||  ||| ||||||||||||| ||||||||||||| ||||||||| |||||    
T  8247041 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaagaaatattacctaaatagttaagggaccaaaaatacaatttaacatttta 8247137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 29864326 - 29864174
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| || |||| ||| || |||||||||||||| |||||||||||||||| |||||||||||||||||||| |    
T  29864326 aagaaaacctaacctttttgaattaaaactaacagaaaggaccaacatgtgtaacagagaaaagttaagggaccaaaataaatcgaattttaattaaggg 29864227  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| |||||||||||||||||| |||||  |||||||||||||| ||||    
T  29864226 accaaagcgatactacctaaatagttaagggataaaaaatgcaatttagcctt 29864174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 54136251 - 54136476
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         |||| |||||||||||    
T  54136251 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaaaaaaccctaatgtttttgaatt 54136350  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||| || |||    ||||||||||| |||||| |||||| ||||||||||||  || ||||   || ||||||||||||    
T  54136351 aaaactaacggaaatgaccaaaatatgcaac----agaagttaaggaaccaaaataaatcaaattttaattaaaggatcaaaacaattctacctaaatag 54136446  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || | |||| |||| ||||||||| |||||    
T  54136447 ttaaaggacaaaaattgcaatttagccttt 54136476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 10014614 - 10014468
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| |    
T  10014614 aagaaaacctaacgtttttgaattaaaattaaccgaaatgaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcg-attttaattaaggg 10014516  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  10014515 accaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 10014468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 10021755 - 10021609
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| |    
T  10021755 aagaaaacctaacgtttttgaattaaaattaaccgaaatgaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcg-attttaattaaggg 10021657  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  10021656 accaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 10021609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 2739030 - 2738880
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||  |||||||||||||||| ||| ||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  |    
T  2739030 aagaaaacctaatatttttgaattaaaactaacgaaaaggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaaagg 2738931  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    ||||||| |||||||| ||||||||| ||||| ||||||||||||||||||    
T  2738930 accaaagcgatactacttaaatagttaagggatcaaaaatgcaatttaacc 2738880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 71 - 212
Target Start/End: Original strand, 12381293 - 12381435
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||      
T  12381293 aaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggatg 12381392  T
Q  171 aaagtgatactacctaaatag-ttagggaccaaaaatgcaatt 212  Q
    |||| |||| | ||||||||| ||||||||||||||| |||||    
T  12381393 aaagcgatattgcctaaatagtttagggaccaaaaatacaatt 12381435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 7 - 214
Target Start/End: Original strand, 54191751 - 54191967
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaa---------aatctaacgtttttgaattaaaact 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||         |||||||| ||||| |||| |||||    
T  54191751 tttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaatttcagaagaacatgaagaaaatctaacattttttaattgaaact 54191850  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
     | ||||| ||| |||||||||||  | |||||||||| | |||||| |||||||||||||||||||| |||||||  ||| ||| |||||||||| |||    
T  54191851 aa-ggaaaggaccaaaatgtgtaatggggagaagttaatgaaccaaaataaatcgaattttaattaagggaccaaaacgatgctatctaaatagttaagg 54191949  T
Q  197 gaccaaaaatgcaattta 214  Q
    |||||||||| |||||||    
T  54191950 gaccaaaaatacaattta 54191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 48210089 - 48209945
Alignment:
Q  77 taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtg 176  Q
    |||| |||||||||||||||| ||||||| ||| |||||||||||  |||||||||||| ||| |||| |||||| ||||||||||||| ||||||||||    
T  48210089 taacctttttgaattaaaactaacggaaaggaccaaaatgtgtaagggagagaagttaaaggatcaaaataaatcaaattttaattaagggaccaaagtg 48209990  T
Q  177 atactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||    
T  48209989 atactacctaaatagttaagggaccaaaaatgtaatttagccttt 48209945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 8751437 - 8751290
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||| |||||||||| || |||| ||  |||||||||||| |||||||||||||||| |||| |||||||||||||| ||||| |    
T  8751437 aagaaaatctaacgttttttaattaaaactaacagaaaggatcaaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttagttaaggg 8751338  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| | ||||||||||||||||| | |||||||||||||||||||    
T  8751337 accaaaattatactacctaaatagttaaaggaccaaaaatgcaattta 8751290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 214
Target Start/End: Complemental strand, 9657884 - 9657670
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||| || |||||         |||||||||||||||||||||| ||    
T  9657884 ttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaaattcagaaaaaaatgaaaataacctaacgtttttgaattaaaactaac 9657785  T
Q  101 ggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-aggga 198  Q
    |||||||||||||||||||||  ||||| ||||||||  | |||| |||||| ||||||||||||| |||||||  |||||||  ||||||||| |||||    
T  9657784 ggaaatgactaaaatgtgtaaggagaga-aagttaagatatcaaaataaatcaaattttaattaagggaccaaaacgatactaattaaatagttaaggga 9657686  T
Q  199 ccaaaaatgcaattta 214  Q
    |||||||| |||||||    
T  9657685 ccaaaaatacaattta 9657670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 25593327 - 25593474
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||||||||||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||| |    
T  25593327 aagaaaacctaacgtttttaaattaaaactaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcgaattttaattaaggg 25593426  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   ||||| ||||||||||| |||||| |||||| |||||||    
T  25593427 accaaaacaatactccctaaatagttaagggacaaaaaatacaattta 25593474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 44710553 - 44710406
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | || |||| ||| |||||||||||| |||||||||||||||| |||| |||||| ||||||  ||||| |    
T  44710553 aagaaaacctaacgtttttgaattaaaattaacagaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaatttttgttaagag 44710454  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  44710453 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 44710406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 18862684 - 18862824
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||||||||| |||||||||| ||||||  ||| |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||  || |||||    
T  18862684 ctaacgttttttaattaaaactaacggaatggacaaaaaggtgtaacagagagcaagttaagggaccaaaataaatcgaattttaattaaaggatcaaag 18862783  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     |||||||||||||||||| |||||||||||||||||||||    
T  18862784 cgatactacctaaatagttaagggaccaaaaatgcaattta 18862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 34958978 - 34958835
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| ||||| |||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||| ||| |||| |||||| ||||||||||||| ||||    
T  34958978 aaaacctaacatttttgaattaaaactaacggaaatgaccaaattgtgtaacagagataagttaa-ggaacaaaataaatcaaattttaattaagggacc 34958880  T
Q  171 aaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||    
T  34958879 aaagcgatactacctaaatagttaagggaccaaaaatacaattta 34958835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 32384803 - 32384656
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||||| ||| ||||| | |||||| ||||||||||||||||||   |    
T  32384803 aagaaaacctaacgtttttgaattaaaactaacataaatgaccaaaatgtgtaacagaaagaggttaaagaaccaaaataaatcgaattttaattagagg 32384704  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  32384703 accaaagcgatactacctaaatagttaagggaccaaaaatacaattta 32384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 21885000 - 21885174
Alignment:
Q  17 tcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaatg 107  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||         | || ||||||||||||||| | ||||||| |    
T  21885000 tcatatcatctccatcaaccttcaacaacaagaatctctgaaaaatttcataagaaaatgaagaaaatcaaatgtttttgaattaaaagtaacggaaagg 21885099  T
Q  108 actaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    || ||||||| |||| || |||| ||||||||||||| |||||| ||||||||||||| |||||||| |||||||    
T  21885100 accaaaatgtttaacggatagaaattaagggaccaaaataaatcaaattttaattaagtgaccaaagcgatacta 21885174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 52915179 - 52915305
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||  |    
T  52915179 aagaaaacctaacgtttttgaattaaaactaacaaaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttagttaaagg 52915278  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    ||||||| |||||||||||||||||||    
T  52915279 accaaagcgatactacctaaatagtta 52915305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 40067498 - 40067345
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| || |||| ||| ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||   |    
T  40067498 aagaaaacataacgtttttgaattaaaactaacagaaaggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagagg 40067399  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||| |||| ||||||||||||| |||||| |||||| ||||||| |||||    
T  40067398 accaaagcgatattacctaaatagttaagggacaaaaaatacaatttagccttt 40067345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 21051580 - 21051362
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc-------at-aagaaaatctaacgtttttgaattaaaac 96  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||||| ||||||          || ||||||| |||||||||||||||||||      
T  21051580 tctttttcatcttcatgtcatctccatcaaccttcaacaacacgaatcccaaaaaaatccagaaaaaaatgaagaaaacctaacgtttttgaattaaatt 21051481  T
Q  97 ttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-ag 195  Q
    | ||||||||||| |||||||||||| || ||||||||| |||||||| |||||| ||||||| ||||| || ||||| ||| ||||||||||| || ||    
T  21051480 taacggaaatgaccaaaatgtgtaacggatagaagttaatggaccaaaataaatcaaattttagttaagagatcaaagcgatgctacctaaataattaag 21051381  T
Q  196 ggaccaaaaatgcaattta 214  Q
    |||| ||||||| ||||||    
T  21051380 ggacaaaaaatgtaattta 21051362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 1205613 - 1205760
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| | ||||| ||| |||||||||||| || ||||| |||||||| ||| |||||||||||||||||||| |    
T  1205613 aagaaaacataacgtttttgaattaaaactaatggaaaagaccaaaatgtgtaacggaaagaaggtaagggacaaaaataaatcgaattttaattaaggg 1205712  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |  |||| |||||| ||||||||||| |||||||||||||||||||||    
T  1205713 agaaaagcgatactgcctaaatagttaagggaccaaaaatgcaattta 1205760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 214
Target Start/End: Complemental strand, 8246914 - 8246772
Alignment:
Q  71 aaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgacc 170  Q
    |||| |||||||||||||||||||||| |||||||  || |||||||||||| |||||||||||||||| |||| |||||| ||||||||||||| ||||    
T  8246914 aaaacctaacgtttttgaattaaaactaacggaaagaaccaaaatgtgtaac-gagagaagttaagggatcaaaataaatcaaattttaattaagggacc 8246816  T
Q  171 aaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    ||| ||||| || ||||||| ||| ||||||||||| |||||||    
T  8246815 aaaatgatattatctaaataattaaggaccaaaaatacaattta 8246772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 228
Target Start/End: Original strand, 32385048 - 32385208
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| ||||| |||||||||| ||||||| ||| |||||||||||| |  ||||||||||| |||||| |||||| ||||||| ||||| |    
T  32385048 aagaaaacctaacattttttaattaaaactaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcaaattttagttaaggg 32385147  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttattttct 228  Q
    |  |||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||    
T  32385148 a-taaagcgatactacctaaatagttaagggaccaaaaatgcaatttaacctatttttttct 32385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 24504090 - 24503942
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatg-actaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    |||||||||||||||||||||||||||||| ||||||| | || || ||||||||||||||||||||||| ||||||| |||||||||||||||||||      
T  24504090 aagaaaatctaacgtttttgaattaaaactaacggaaaaggaccaagatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaaag 24503991  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
     ||||||   |||||||||||||| || |||||  ||||||||||||||    
T  24503990 aaccaaaacaatactacctaaataattaagggattaaaaatgcaattta 24503942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 217
Target Start/End: Complemental strand, 1157356 - 1157203
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaag---ttaagggaccaaagtaaatcgaattttaattaa 164  Q
    ||||||| ||||| |||||||||||||| | || |||| ||| |||||||||||||||||||||   ||||||||||||| |||||  ||||||||||||    
T  1157356 aagaaaacctaacatttttgaattaaaattaacagaaaggaccaaaatgtgtaacagagagaagtacttaagggaccaaaataaattaaattttaattaa 1157257  T
Q  165 gcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    |  ||||||| |||| ||| ||||||||| ||||||||||||||||||||||||    
T  1157256 ggaaccaaagcgatattacttaaatagttaagggaccaaaaatgcaatttaacc 1157203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 11242705 - 11242847
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||||||||||||     |||||| || ||||| | |||| || |||| ||||||||||||| |||||||||||||||| ||| |    
T  11242705 aagaaaacctaacgtttttgaattaaaa-----ggaaataaccaaaatatataacggaaagaaattaagggaccaaaataaatcgaattttaatcaaggg 11242799  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||    
T  11242800 accaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 11242847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 25977911 - 25977768
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||||| | ||||| ||| ||||| |||||| ||||||||||||||||||||| ||||| ||||||||||| || ||||||||     
T  25977911 ctaacgtttttgaattaaaactaatggaaaagaccaaaatatgtaacggagagaagttaagggaccaaaataaattgaattttaattgagagaccaaagc 25977812  T
Q  176 gatactacctaaatagtt-agggacc-aaaaatgcaatttaacc 217  Q
    |||| |||||| |||||| ||||||| |||||| ||||||||||    
T  25977811 gatagtacctagatagttaagggaccaaaaaatacaatttaacc 25977768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 45683267 - 45683120
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| ||  ||| ||| ||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||  |    
T  45683267 aagaaaacctaatgtttttgaattaaaactaacaaaaaggaccaaaatgtgtaacagagagaagttaagggatcaaaataaatcaaattttacttaaagg 45683168  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| || || |||||||| ||||||    
T  45683167 accaaagcgatactacctaaatagttaagagatcaaaaatgtaattta 45683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 21051583 - 21051688
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| | ||||||||| ||||||||||| | |||||||||||||||||||| |||||| ||||||||||||| |    
T  21051583 aagaaaacctaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaataaagagaagttaagggaccaaaataaatctaattttaattaaggg 21051682  T
Q  168 accaaa 173  Q
    ||||||    
T  21051683 accaaa 21051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 44428721 - 44428616
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| ||||| |    
T  44428721 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagttaaggg 44428622  T
Q  168 accaaa 173  Q
    ||||||    
T  44428621 accaaa 44428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 4966104 - 4966251
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||  ||||||||||||| ||| ||| ||||||||||||||||||||      
T  4966104 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtataatggagagaagttaagagacaaaaataaatcgaattttaattaagga 4966203  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||  ||||| |||||||||||| |||| | | ||||||||||||    
T  4966204 atcaaaacgataccacctaaatagttaaggggcaagaaatgcaattta 4966251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 194
Target Start/End: Original strand, 43969763 - 43969889
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||||||| ||||||| ||  ||||||| ||||| | ||||||||||||||||||||||||||||||||||| ||| |    
T  43969763 aagaaaacctaacatttttgaattaaaactaacggaaaggatcaaaatgtataacaaaaagaagttaagggaccaaagtaaatcgaattttaatcaaggg 43969862  T
Q  168 accaaagtgatactacctaaatagtta 194  Q
    | ||||  |||||||| ||||||||||    
T  43969863 atcaaaacgatactacataaatagtta 43969889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 54191738 - 54191641
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    ||||||| |||||||||||||||||||||| || |||| ||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  54191738 aagaaaacctaacgtttttgaattaaaactaacagaaaggatcaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaag 54191641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 15985609 - 15985457
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||||  ||||| || ||||||  |||||| |||||| ||||||||||||| |||||||     
T  15985609 ctaacgtttttgaattaaaactaacgtaaaggaccaaaatgtgtattagagaaaaagttaagataccaaaataaatcaaattttaattaagggaccaaaa 15985510  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
     ||||||| | |||||||| || ||||||||||||||||||||||||| ||||    
T  15985509 cgatactagcaaaatagttaagagaccaaaaatgcaatttaaccttttttttt 15985457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 11102217 - 11102362
Alignment:
Q  75 tctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||| ||||||||  || ||| |||||| ||||||||||||| |||||||    
T  11102217 tctaacatttttgaattaaaactaacgtaaatgaccaaaatgtgtaacggagagaaagttaagatactaaaataaatcaaattttaattaagggaccaaa 11102316  T
Q  174 gtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
       ||||||  ||||||||| ||||||||||||| |||||||||||    
T  11102317 ccaatactaattaaatagttaagggaccaaaaatacaatttaacct 11102362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 77 - 220
Target Start/End: Complemental strand, 44170121 - 44169976
Alignment:
Q  77 taacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||| || || ||||||||  || ||| |||||| ||||||||| ||| ||||||||     
T  44170121 taacatttttgaattaaaactaacggaaatgaccaaaatgtgtaacggatagaaagttaagatactaaaataaatcaaattttaatcaagggaccaaagc 44170022  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    |||||||  ||||||||| ||||||||||||| ||||||| |||||    
T  44170021 gatactaattaaatagttaagggaccaaaaatacaatttagccttt 44169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 12381280 - 12381188
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaact 97  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||    | |||||||||| ||||||||||||||||    
T  12381280 ctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcccaaaaaaattt----aaaaaatctaacatttttgaattaaaact 12381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 42779670 - 42779573
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| || |||| |||  ||| ||||||||||||||||||||    
T  42779670 aagaaaatctaacgtttttgaattaaaactaacggaaaagaccaaaatgtgtaacaaagataaattaacggattaaaataaatcgaattttaattaag 42779573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 38866635 - 38866786
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaaggga-ccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||| |||||| | |||||||| ||  ||||||| ||||||||||||||| ||||||||| ||| | ||| ||||||||||||||||||       
T  38866635 aagaaaagctaatgttttttatttaaaactaacataaatgaccaaaatgtgtaacagaaagaagttaaaggatcaaaaataaatcgaattttaattagag 38866734  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
     ||||||| |||||||||||||||||| ||| | ||||||| ||||||||||    
T  38866735 taccaaagcgatactacctaaatagttaaggaatcaaaaatacaatttaacc 38866786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 22830939 - 22830801
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||| |||||||||||||||| ||  ||| ||| |||||||||||| ||||||| ||||||  |||||| |||||| ||||||||||||| ||||||||    
T  22830939 ctaacatttttgaattaaaactaacataaaggaccaaaatgtgtaacggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaag 22830840  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
      |||||| | |||||||| ||||||||||||| |||||    
T  22830839 ctatactagcaaaatagttaagggaccaaaaatccaatt 22830801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 37515634 - 37515525
Alignment:
Q  112 aaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagggaccaaaaatgcaat 211  Q
    |||||||||||  |||||||||||||||| ||| |||||  ||||||||||||  || ||| | ||||||||||||||||||| | | ||||||||||||    
T  37515634 aaatgtgtaacgaagagaagttaagggacaaaaataaattaaattttaattaaaggatcaacgggatactacctaaatagttaagaaacaaaaatgcaat 37515535  T
Q  212 ttaacctttt 221  Q
    ||||||||||    
T  37515534 ttaacctttt 37515525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 46535758 - 46535905
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| |||||| |||||||||| || |||| ||| ||||||| || |||| ||||||||| |||||||  ||||| ||||||||||||   |    
T  46535758 aagaaaacctaatgttttttaattaaaactaacagaaaggaccaaaatgtataccagaaagaagttaaaggaccaagataaatagaattttaattagagg 46535857  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||   ||||||||||||||||| || |||||||||| |||||||    
T  46535858 accaaaacaatactacctaaatagttaagtgaccaaaaatacaattta 46535905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53645611 - 53645684
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  53645611 ctcctctttttcactt-catatcatctccgtcaaccttcaacaacaaaaatcccagaaaaatttcaaaagaaaat 53645684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 43969753 - 43969598
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattt---------cat-aagaaaatctaacgtttttgaat 90  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| | ||||| ||          || ||||||| ||||| |||||||||    
T  43969753 ctcctctttttcatcttcatatcatctccatcaaccttcagcaacaagaatccaaaaaaaaattatagaagaaaatgaagaaaacctaacatttttgaat 43969654  T
Q  91 taaaacttacgg-aaatgactaaaatgtgtaacagagagaagttaagggaccaaag 145  Q
    ||||||  | || ||| ||| ||||| ||||||||| |||||||||||||||||||    
T  43969653 taaaaccaatggaaaaggaccaaaatatgtaacagatagaagttaagggaccaaag 43969598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44432850 - 44432799
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatc 52  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44432850 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatc 44432799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 42779673 - 42779731
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||    
T  42779673 tctttttcatcttcatatcatctccatcaaccttcaacaacaaaaattccagaaaaatt 42779731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 9657891 - 9658036
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||||||||||||| |||||||  || |||||||||||  ||||| ||||||||  |||||| |||||  ||||||||||| | |||||||     
T  9657891 ctaacgtttttgaattaaaactaacggaaagaaccaaaatgtgtaaggagaga-aagttaagataccaaaataaattaaattttaattaggggaccaaaa 9657989  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
     |||||||  ||||||||| ||||| |||||||  |||||| |||||    
T  9657990 cgatactaattaaatagttaagggatcaaaaatataatttagccttt 9658036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32384818 - 32384872
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaa 61  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||    
T  32384818 ttttttattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaa 32384872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 44428597 - 44428511
Alignment:
Q  134 aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||||||| |||||| ||||||| ||||| |||||||| |||| ||||||||||||| ||| | ||||||||||||||| ||||    
T  44428597 aagggaccaaaataaatcaaattttagttaagggaccaaagcgataatacctaaatagttaaggtatcaaaaatgcaatttagcctt 44428511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 29970428 - 29970498
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaaggg 138  Q
    |||||||  ||||| ||||||||||||||| |||||||   | ||||||||||||||||||||||||||||    
T  29970428 aagaaaacttaacgattttgaattaaaactaacggaaagctccaaaatgtgtaacagagagaagttaaggg 29970498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 214
Target Start/End: Original strand, 44170141 - 44170364
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaa 93  Q
    |||||| ||||| ||||||||| || |||| |||||||||||||| || | | |||||||| || ||||||||         ||||||||||| ||||||    
T  44170141 cctcttcttcatcttcatatcaccttcatctaccttcaacaacaaaaacctccgaaaaattccagaagaaaatgaaaaaactctaacgtttttaaattaa 44170240  T
Q  94 aacttacggaaatgactaaaa--tgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    |||| ||||||| ||| ||||  | |||| | || |||| |||||   |||||| |||||| ||||||||||||| || |||||  ||||||  ||||||    
T  44170241 aactaacggaaaggaccaaaaaatatgta-cggatagaaagttaaaataccaaaataaatcaaattttaattaagggatcaaagcaatactaattaaata 44170339  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| ||||| |||||||||||||||    
T  44170340 gttaagggatcaaaaatgcaattta 44170364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 4965891 - 4965844
Alignment:
Q  167 gaccaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||    
T  4965891 gaccaaagcgatattacttaaatagttagggaccaaaaatgcaattta 4965844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 29970517 - 29970555
Alignment:
Q  176 gatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  29970517 gatactacctaaatagttaaggaccaaaaatgcaattta 29970555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 10017856 - 10017818
Alignment:
Q  177 atactacctaaatagtta-gggaccaaaaatgcaattta 214  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10017856 atactacctaaatagttaagggaccaaaaatgcaattta 10017818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 13705 - 13927
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||         | ||||||||||||||||||    
T  13705 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacccaacgtttttgaattaaaa 13804  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtta- 194  Q
       |||||||| || ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||     
T  13805 tcaacggaaataaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttag 13904  T
Q  195 gggaccaaaaatgcaatttaacc 217  Q
    |||||||||||| ||||||||||    
T  13905 gggaccaaaaatacaatttaacc 13927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 219
Target Start/End: Complemental strand, 13690 - 13540
Alignment:
Q  69 agaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcga 168  Q
    |||||| |||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||    
T  13690 agaaaacctaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcggattttaactaaggga 13591  T
Q  169 ccaaagtgatactacctaaatagttagggaccaaaaatgcaatttaacctt 219  Q
    ||||||  || ||| ||||||||||| ||||||||||||||||||| ||||    
T  13590 ccaaagcaattctaactaaatagttaaggaccaaaaatgcaatttagcctt 13540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 7399300 - 7399080
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc-ataagaaaat---------ctaacgtttttgaattaaa 94  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||         |||||||||||||||||||    
T  7399300 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaaattccataagaaaatgaagaaaacctaacgtttttgaattaaa 7399201  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    | | ||| ||| ||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||     
T  7399200 aataacgaaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtta 7399101  T
Q  194 agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||    
T  7399100 agggaccaaaaatgcaattta 7399080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 19205103 - 19205332
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||         |||| |||||||||||    
T  19205103 ctcctctttttgatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaagagaatgaagaaaacctaaagtttttgaatt 19205202  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||| |||||||||||||||  |||| |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  19205203 aaaactaacggaaaggaccaaaatgtgtaacggagagaagttaaggggtcaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatag 19205302  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || ||||| |||||||||||||||||||||    
T  19205303 ttaagggatcaaaaatgcaatttaaccttt 19205332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 35263654 - 35263883
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  | ||||||||         ||||||||||||||||    
T  35263654 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaattctagaagaaaatggagaaaacctaacgtttttgaatt 35263753  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||||||||||| |||||| |||| |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||||     
T  35263754 aaaactaacggaaaggaccaaaatgtgtaacaaagagaatttaatggaccaaaataaatcgaattttagttaagggaccaaagtcatactacctaaataa 35263853  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || ||||||||||||||||||||| |||||    
T  35263854 ttaagggaccaaaaatgcaatttagccttt 35263883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 8418412 - 8418192
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||  |   |||||||||||||||| ||    
T  8418412 ctcctctttttcatcttcatatcat-tcc-tcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaa---tttttgaattaaaactaac 8418318  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||||||  ||||||||||||||| || | ||||    
T  8418317 ggaaatgacaaaaatgtgtaacagagagaagttaa-gaaccaaaataaatcgaattttaattaagtgaccaaaacgatactacctaaataattaatggac 8418219  T
Q  200 caaaaatgcaatttaaccttttatttt 226  Q
    ||||||||||||| ||| |||||||||    
T  8418218 caaaaatgcaattcaacattttatttt 8418192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10656320 - 10656092
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||    
T  10656320 ctcctctttttcatcttcatatcatctccaccaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttgaatt 10656221  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || |||||||| |||||||||||| |||| ||||||| ||| |||| |||||| ||||||| ||||| |||||||| ||||||||||||||||    
T  10656220 aaaactaaccgaaatgaccaaaatgtgtaacggagataagttaaaggagcaaaataaatcaaattttagttaagggaccaaagcgatactacctaaatag 10656121  T
Q  192 tt-agggaccaaaaatgcaatttaacctt 219  Q
    || ||||||||||||| ||||||| ||||    
T  10656120 ttaagggaccaaaaatacaatttagcctt 10656092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 29024160 - 29023934
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||         ||||| ||||||||||    
T  29024160 ctcctctttttcatcttcatatcatctccattaaccttcaacaacaagaattccagaaaaattccagaagaaaatgaagaaaacctaacatttttgaatt 29024061  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||| | ||||||||||| ||||| |||||||||||||| ||||||||||||   |||||||||||||||||||  ||||||| ||||||||||||||||    
T  29024060 aaaattaacggaaatgaccaaaatatgtaacagagagaaattaagggaccaa---aaatcgaattttaattaaggaaccaaagcgatactacctaaatag 29023964  T
Q  192 tt-agggaccaaaaatgcaatttaaccttt 220  Q
    || ||||||||||||||||||||| |||||    
T  29023963 ttaagggaccaaaaatgcaatttagccttt 29023934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 42710510 - 42710733
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaa---------aatctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||| || |||||         |||||||||||||||||||    
T  42710510 ctcctctttttcatcttcatatcatctccttcaaccttcaataacaagaatcccataaaaattccagaagaaaatgtagaaaatctaacgtttttgaatt 42710609  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||| | ||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  42710610 aaaactaacggaaatgaccaaaatttataacaaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatag 42710709  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||||||||||||| |||||||    
T  42710710 ttaagggaccaaaaatacaattta 42710733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 38416360 - 38416146
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttac 100  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| | ||  |||||||||||||||| ||    
T  38416360 ctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatcccagaaaaattccagaagaaaacccaatatttttgaattaaaactaac 38416261  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||||||  |||||||||||| |||||||||||||  | |||| ||||| |||||||||||||| |||||||| ||||||||||||||| || || ||     
T  38416260 ggaaatgatcaaaatgtgtaaccgagagaagttaagaaaacaaaataaattgaattttaattaagggaccaaagcgatactacctaaataattaagagat 38416161  T
Q  200 caaaaatgcaattta 214  Q
     ||||||||||||||    
T  38416160 taaaaatgcaattta 38416146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 5088032 - 5087811
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| ||||||||         |||||||||||||||||    
T  5088032 tcctctttttcattttcatatgatctccatcaactttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaatta 5087933  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||| ||| |||||||||||| |  ||||||||||| |||||| ||||| |||||||| ||||| |||||||| |||||||||||||||||    
T  5087932 aaactaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaattgaattttagttaagggaccaaagcgatactacctaaatagt 5087833  T
Q  193 t-agggaccaaaaatgcaattt 213  Q
    | ||||||||||||| ||||||    
T  5087832 taagggaccaaaaattcaattt 5087811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 7210619 - 7210828
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatctaacgtttttgaattaaaacttacgga 103  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| ||  | |  |||||| |||||||||||||||||||||| |||||    
T  7210619 ctctttttcatcttcatatcatctccataaacattcaacaacaagaatcccagaagaaaatga--agaaaacctaacgtttttgaattaaaactaacgga 7210716  T
Q  104 aatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaa 202  Q
    || ||| ||||||||||||| | |||||||||  ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||| || ||||||    
T  7210717 aaggaccaaaatgtgtaacataaagaagttaaaagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagtgaccaa 7210816  T
Q  203 aaatgcaattta 214  Q
     |||||||||||    
T  7210817 gaatgcaattta 7210828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 12593616 - 12593843
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||||||  | ||||||||         ||||||||||| ||||    
T  12593616 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataattctagaaaaattcgagaagaaaatgaagaaaacctaacgtttttaaatt 12593715  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||  |||||||||||||||    
T  12593716 aaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcaatactacctaaatag 12593815  T
Q  192 tt-agggaccaaaaatgcaatttaacct 218  Q
    || | |||| ||||||| ||||||||||    
T  12593816 ttaaaggactaaaaatgtaatttaacct 12593843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40589214 - 40589437
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||         ||||||||| ||||||||||    
T  40589214 ctcctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcaaaagaaaatgaagaaaatctaacatttttgaatt 40589313  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||| ||| | ||| |||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||  ||||||||||||||||    
T  40589314 aaaactaatggaaaggaccagaatatgtaacggagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatag 40589413  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||| |||||||||||||||||    
T  40589414 ttaaggaaccaaaaatgcaattta 40589437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40589817 - 40590040
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||         ||||||||| ||||||||||    
T  40589817 ctcctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcaaaagaaaatgaagaaaatctaacatttttgaatt 40589916  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||| ||| | ||| |||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||  ||||||||||||||||    
T  40589917 aaaactaatggaaaggaccagaatatgtaacggagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatag 40590016  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || ||| |||||||||||||||||    
T  40590017 ttaaggaaccaaaaatgcaattta 40590040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 31656584 - 31656361
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc--------at-aagaaaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |        || ||||||| |||| |||||||||||    
T  31656584 ctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccataaaaattccggaaaaaaatgaagaaaacctaatgtttttgaatt 31656485  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| | ||||||||| |||||||||| |||||||||||||| ||| |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  31656484 aaaactaatggaaatgaccaaaatgtgtatcagagagaagttaaaggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatag 31656385  T
Q  192 tt-agggacc-aaaaatgcaattt 213  Q
    || ||||||| |||||||||||||    
T  31656384 ttaagggaccaaaaaatgcaattt 31656361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 40774563 - 40774341
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||         |||| |||||||||||    
T  40774563 ctcctatttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaattttagaagaaaatgaagaaaatctaatgtttttgaatt 40774464  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| ||| |||   |||||||||||||||    
T  40774463 aaaactaacggaaatgaccaaaatgtgtaagagagagaagttaagggaccaaaataaatcg-attttaattaagggactaaaacaatactacctaaatag 40774365  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || |||||| ||||||| ||||||    
T  40774364 ttaagggacaaaaaatgaaattta 40774341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 9693068 - 9692922
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||| |    
T  9693068 aagaaaacctaacgttattgaattaaaactaacggaaatgaccaaaatgtgtaacggagagaagtcaagggaccaaaataaatcgaattttaattaaggg 9692969  T
Q  168 accaaagtgatactacctaaatagttagggaccaaaaatgcaattta 214  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  9692968 accaaagcgatactacctaaatagttagggaccaaaaatacaattta 9692922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 9693079 - 9693301
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||| |||||| || |||||||          | ||| |||||||||||    
T  9693079 tcctctttttcatcttcatatcatctctaccaacctttaacaacaagaatcccaggaaaattccagaagaaaacgaaaaaaaccaaacatttttgaatta 9693178  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||||| |||||||  |||||||||||||| ||    
T  9693179 aaactaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaatataaatcgatttttaattaagggaccaaatcgatactacctaaatcgt 9693278  T
Q  193 t-agggaccaaaaatgcaattta 214  Q
    | |||||||||||||||||||||    
T  9693279 taagggaccaaaaatgcaattta 9693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 12694846 - 12695068
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||| ||||||| || || |||||         ||||||||||||||||    
T  12694846 ctcctctttttcatcctcatatcatcttcatcagccttcaacaacaagaatcccaaaaaaattccaaaataaaatgaagaaaacctaacgtttttgaatt 12694945  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| || ||||| || |||||||||||  || |||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  12694946 aaaactaacagaaataaccaaaatgtgtaatggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatag 12695045  T
Q  192 tt-agggaccaaaaatgcaattt 213  Q
    || |||||| |||||||||||||    
T  12695046 ttaagggactaaaaatgcaattt 12695068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 4 - 206
Target Start/End: Original strand, 28391932 - 28392145
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| |||||||||||||||||||||||||| |||||  ||| |||||||||| || || |||||         |||||||||||||||||||    
T  28391932 ctctttttcatattcatatcatctccatcaaccttcaataacaaagatcacagaaaaattccagaaaaaaatggagaaaccctaacgtttttgaattaaa 28392031  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaag-ttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt 193  Q
    ||| ||||||||||| |||||||||||| |||||||| |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  28392032 actaacggaaatgaccaaaatgtgtaacggagagaaggttaatggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtt 28392131  T
Q  194 -agggaccaaaaat 206  Q
     || ||||||||||    
T  28392132 aagagaccaaaaat 28392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 15267403 - 15267622
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat----------ctaacgtttttgaattaaa 94  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||| || ||||||||          |||||||||||||||||||    
T  15267403 tctttttcatcttcatatcatctctatcaaccttcaacaataagaatcccaaaaaaattccagaagaaaatgaaaaaaaacctaacgtttttgaattaaa 15267502  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    ||| ||  ||| ||| |||||||||||| |||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||     
T  15267503 actaacataaaggaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagtta 15267602  T
Q  194 agggaccaaaaatgcaattt 213  Q
    | ||| ||||||||||||||    
T  15267603 aaggatcaaaaatgcaattt 15267622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 40589204 - 40589057
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||  | |    
T  40589204 aagaaaatctaacgtttttgaattaaaactaacagaaatgaccaaaatgtgtaacaaagagaagtcaagggaccaaaataaatcgaattttaatttggag 40589105  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  40589104 accaaagtgaaactacctaaatagttaagggaccaaaaatgcaattta 40589057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 40589807 - 40589660
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| || |||||||| ||||||||||||| |||||||| ||||||||||| |||||||||||||||||  | |    
T  40589807 aagaaaatctaacgtttttgaattaaaactaacagaaatgaccaaaatgtgtaacaaagagaagtcaagggaccaaaataaatcgaattttaatttggag 40589708  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  40589707 accaaagtgaaactacctaaatagttaagggaccaaaaatgcaattta 40589660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 25923278 - 25923506
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaa-atttcataagaaaatc---------taacgtttttgaat 90  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||| || ||||||||          ||||||||||||||    
T  25923278 ctcctcttttccatcttcatatcatctccatcaacctttaacaacaagaatcccagaaaatattccaaaagaaaatgaagaaaacttaacgtttttgaat 25923377  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
    ||||||| ||||||||||| ||||| |||||| ||||||| ||||| ||||||| ||||| |||||||||||||| |||||||   ||||||| ||||||    
T  25923378 taaaactaacggaaatgaccaaaatatgtaacggagagaaattaagagaccaaaataaattgaattttaattaagggaccaaaacaatactacataaata 25923477  T
Q  191 gttagggaccaaaaatgcaatttaacctt 219  Q
    |||  | ||||||||||||||||| ||||    
T  25923478 gttttgaaccaaaaatgcaatttagcctt 25923506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 206
Target Start/End: Complemental strand, 26289242 - 26289031
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataag---------aaaatctaacgtttttgaattaaaa 95  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||| | ||| |||| |||         |||||||||||||||| ||||||||    
T  26289242 tctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccatagaaagttcagaaggaaatgaagaaaatctaacgtttttaaattaaaa 26289143  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || ||||||| ||| ||||||||| ||| | ||||||||| |||||||| |||||| ||||||||||||| ||| |||| |||||||||||||||||| |    
T  26289142 ctaacggaaaggacgaaaatgtgtgacatatagaagttaaaggaccaaaataaatcaaattttaattaagggacgaaagcgatactacctaaatagttaa 26289043  T
Q  195 gggaccaaaaat 206  Q
    ||||||||||||    
T  26289042 gggaccaaaaat 26289031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 33763086 - 33763290
Alignment:
Q  17 tcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc-------taacgtttttgaattaaaacttacggaaatgac 109  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||        ||||||||||||||||||||  | |||||||      
T  33763086 tcatatcatctccatcaaccttgaacaacaagaatcccagaaaaattacaaatgaaaatgaagaaaataacgtttttgaattaaaaccaaaggaaatgta 33763185  T
Q  110 taaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgc 208  Q
     |||||||||||| |||||||||||||||||| || ||||||||||||||||||||  ||||||| ||||||| |||||||||| |||||||||||||||    
T  33763186 caaaatgtgtaacggagagaagttaagggaccgaaataaatcgaattttaattaaggaaccaaagcgatacta-ctaaatagttaagggaccaaaaatgc 33763284  T
Q  209 aattta 214  Q
    ||||||    
T  33763285 aattta 33763290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 36752128 - 36751905
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    ||||| ||||| || ||||||| ||||||||||||||||||||||||||||  ||||||| ||| | ||||||||         ||||||||||||||||    
T  36752128 ctccttttttttatcttcatattatctccatcaaccttcaacaacaagaatttcagaaaatttttagaagaaaatgaagaaaacctaacgtttttgaatt 36752029  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |||||||  || ||||||| |||||||||||||||||||||| ||| |||||| ||||||||||||| |||||||  ||||||||||||||||    
T  36752028 aaaactaacggaaagaaccaaaatgtttaacagagagaagttaagggactaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatag 36751929  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || | ||||||||||| |||||||    
T  36751928 ttaaaggaccaaaaatacaattta 36751905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 17861199 - 17861413
Alignment:
Q  2 tcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatta 92  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| || ||||||||         |||||||||||||||||    
T  17861199 tcctctttttcatcttcatatcatctccatcaaccttcaacagcaagaataccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatta 17861298  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||  ||| ||| ||| |||||||||||| |||||||||||  |||||||| ||||      |||||||||| |||||||||||||||||||||||| |    
T  17861299 aaaccaacgaaaaggaccaaaatgtgtaacggagagaagttacaggaccaaaataaa------tttaattaag-gaccaaagtgatactacctaaataat 17861391  T
Q  193 tagggaccaaaaatgcaattta 214  Q
    |||||||||||||| |||||||    
T  17861392 tagggaccaaaaatacaattta 17861413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 39706277 - 39706058
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||  ||| ||||||||         ||||||||||||||||    
T  39706277 ctcctctttttcatcttcatatcatctctatcaaccttcaacaacaagaatcccaaaaaaaaatcagaagaaaataaagaaaacctaacgtttttgaatt 39706178  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||| ||| ||||| | |||| ||||||||||||||||||||| |||||||||||||||||||  |||||||| |    ||| |||||||    
T  39706177 aaaactaacggaaaagaccaaaatatctaactgagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcg----tacataaatag 39706082  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||||||||||    
T  39706081 ttaagagaccaaaaatgcaattta 39706058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 16353376 - 16353154
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaa 95  Q
    |||||||||| |||||||||||||||||||| ||||| | ||||||| |||||||||||| | ||||||||         ||||||||||||||||||||    
T  16353376 tctttttcatcttcatatcatctccatcaactttcaatagcaagaattccagaaaaattttagaagaaaatgaagaaaacctaacgtttttgaattaaaa 16353277  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-- 193  Q
    || |||||||||||  ||||| |||||| ||| |||||||||||||||| |||||| ||||||||||||| |||||||  |||||||||||||||||       
T  16353276 ctaacggaaatgaccgaaatgagtaacatagaaaagttaagggaccaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatagtagt 16353177  T
Q  194 --agggaccaaaaatgcaattta 214  Q
      |||||||||||||| ||||||    
T  16353176 taagggaccaaaaatgtaattta 16353154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 3878631 - 3878479
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||  |||||||| || ||||||||||||| |||||||| ||||||||||||||||||| ||    
T  3878631 aagaaaacctaacgtttttgaattaaaactaacggaaatgatcaaaatgtgcaatagagagaagttaaaggaccaaaataaatcgaattttaattaaacg 3878532  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||| ||||||||||||||| || ||||||||||||| ||||||| ||||    
T  3878531 accaaagcgatactacctaaataattaagggaccaaaaatacaatttagcctt 3878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 18514430 - 18514291
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||||| | ||||| ||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||||     
T  18514430 ctaacgtttttgaattaaaactaatggaaacgaccaaaatgtgtaacatagagaagttaagggaccaaaataaattgaattttaactaagcgaccaaagg 18514331  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  18514330 gatacttcctaaatagttaagggaccaaaaatgcaattta 18514291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 39706287 - 39706433
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||| |||||||||||||| ||||| ||  ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |    
T  39706287 aagaaaatccaacgtttttgaattgaaactaacaaaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaggg 39706386  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattt 213  Q
    ||||||   ||||||||||||||||| ||||||||||||||||||||    
T  39706387 accaaaagaatactacctaaatagttaagggaccaaaaatgcaattt 39706433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 41859913 - 41860069
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| |||||||||||| ||| ||||||| ||| ||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||| |    
T  41859913 aagaaaacctaacctttttgaattaatactaacggaaaggaccaaaatgtgtaacagaaagaagttaagggatcaaaataaattgaattttaattaaggg 41860012  T
Q  168 accaaagtgatac--tacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||||||||||||  ||||||||||||| || |||||||||||||||||||||||||    
T  41860013 accaaagtgatactatacctaaatagttaagagaccaaaaatgcaatttaacctttt 41860069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 334446 - 334299
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| | || || ||| |||||||||||  ||||||||||||||||||||| |||||| ||||||||||||| |    
T  334446 aagaaaacctaacgtttttgaattaaaactaatgggaaggaccaaaatgtgtaaaggagagaagttaagggaccaaaataaatcaaattttaattaaggg 334347  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||||    
T  334346 accaaagtgatactacctaaatagttaaaggactaaaaatgcaattta 334299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 7210604 - 7210461
Alignment:
Q  70 gaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgac 169  Q
    ||||| |||||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||    
T  7210604 gaaaacctaacgtttttgaattaaaactaacggaaaggatcaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaatcaagggac 7210505  T
Q  170 caaagtgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    ||||  |||| |||||||||| || |||||||||||||||||||    
T  7210504 caaaacgatagtacctaaatatttaagggaccaaaaatgcaatt 7210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 31656594 - 31656741
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |    
T  31656594 aagaaaacctaacgtttttgaattaaaactaacggaaagaaccaaaatgtgtaacagagagaagttatgggaccaaaataaatcgaattttaattaaggg 31656693  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||| |||||  |||| |||||||||||||| ||||||    
T  31656694 accaaagcgatactgcctaataagttaagggaccaaaaatgtaattta 31656741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 33699417 - 33699278
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||  |||||||      
T  33699417 ctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaaccgaattttagttaaaggaccaaaac 33699318  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  33699317 gatactacctaaatagttaagggaccataaatgcaattta 33699278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 31909096 - 31909318
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaact 97  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||||| || ||| || || ||||||||         ||||| ||||| |||||||| |    
T  31909096 tttttcatcttcatatcatcttcatcaacgttcaacaacaagaatcctaggaaacttccagaagaaaatgaagaaaacctaacattttttaattaaaatt 31909195  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
     ||| ||||||| ||||| ||||| ||| |||||||||||||||||| |||||| ||||||||||||| ||| |||  ||||||||||||| |||| |||    
T  31909196 aacgaaaatgaccaaaatatgtaaaagatagaagttaagggaccaaaataaatcaaattttaattaagggacgaaaacgatactacctaaacagttaagg 31909295  T
Q  197 gaccaaaaatgcaatttaacctt 219  Q
    |||||||||||||||||||||||    
T  31909296 gaccaaaaatgcaatttaacctt 31909318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 10656330 - 10656477
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||  ||| ||| |||||||||||||||||||||||||||||| ||| |||||| ||||||| ||||  |    
T  10656330 aagaaaacctaacgtttttgaattaaaactaacaaaaaggaccaaaatgtgtaacagagagaagttaagggactaaaataaatcaaattttacttaaagg 10656429  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  10656430 accaaagcgatactacctaaatagttaagggatcaaaaatgcaattta 10656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 12593606 - 12593459
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||||||||||| |||||||| | ||||||||| ||||||||||||||| ||||||||||| |||||  |||||||||||||| ||||| |    
T  12593606 aagaaaatctaacgtttttgacttaaaactaaaggaaatgaccaaaatgtgtaacagaaagaagttaaggaaccaatataaatcgaattttagttaaggg 12593507  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||  ||| |||||||||||||||||| ||||| |||||||||||||||    
T  12593506 actgaagcgatactacctaaatagttaagggatcaaaaatgcaattta 12593459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 19205093 - 19204947
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |   |||   ||| ||||||||||||| |    
T  19205093 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaccagagagaagttaaggtatttaag-ccatcaaattttaattaaggg 19204995  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  19204994 accaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 19204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 35263644 - 35263497
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| |||||| |||||||| | ||||||| ||| ||||| ||||||| ||||||||||| |||||||| |||||||||||||| ||||| |    
T  35263644 aagaaaacctaatgttttttaattaaaattaacggaaaggaccaaaatatgtaacaaagagaagttaaaggaccaaaataaatcgaattttagttaaggg 35263545  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  35263544 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 35263497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 41372333 - 41372532
Alignment:
Q  16 ttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttacggaaat 106  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||| || ||||||||         |||||||||||||||||||||| ||| ||||    
T  41372333 ttcatatcatctctatcaaccttcaacaacaaaaatccgagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaattaaaactaacgaaaat 41372432  T
Q  107 gactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaa 205  Q
    ||| ||||||||||| ||||||||||||||  |||||| |||||| ||||||||||||| |||||||  |||| ||  ||||||||| ||||||||||||    
T  41372433 gaccaaaatgtgtaatagagagaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatattaattaaatagttaagggaccaaaaa 41372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15476485 - 15476257
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatc----aaccttcaacaacaagaatcccagaaaaatttcataagaaaatcta----acgtttttgaatta 92  Q
    |||||||||||||| ||||||||||||| |||    ||||||||||||||||||||||| |||||||||| ||||||||  |    || ||||| |||||    
T  15476485 ctcctctttttcatcttcatatcatctctatctatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacattttttaatta 15476386  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagt 192  Q
    ||||| |||      || |||||||||||| ||||||||||||| ||||||| |||||  ||||||||||||| || ||||| |||||||||||||||||    
T  15476385 aaactaacg------accaaaatgtgtaacggagagaagttaagagaccaaaataaataaaattttaattaagggatcaaagcgatactacctaaatagt 15476292  T
Q  193 t-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    | |||||||||||||  ||||||||| ||| ||||    
T  15476291 taagggaccaaaaatataatttaaccatttttttt 15476257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 219
Target Start/End: Original strand, 38416370 - 38416522
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||  |||||||||||| || ||||||||||| |||||| |||||||||||||||||||| |    
T  38416370 aagaaaacctaacgtttttgaattaaaactaacggaaaggatcaaaatgtgtaacggaaagaagttaaggaaccaaaataaatcgaattttaattaagtg 38416469  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    | ||||| ||||||||||||||| || || |||||||||| ||||||| ||||    
T  38416470 agcaaagcgatactacctaaataattaagagaccaaaaatacaatttagcctt 38416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 16353390 - 16353537
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||||||||| |||||||||| ||  ||| ||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||| | |    
T  16353390 aagaaaacctaacgttttttaattaaaactaacaaaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattagggg 16353489  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||| ||||||||| ||||| |||||||||||||||    
T  16353490 accaaagcgatactacttaaatagttaagggatcaaaaatgcaattta 16353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 76 - 218
Target Start/End: Original strand, 15476503 - 15476645
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    ||||| |||||||||||||||| ||||||| ||| ||||||||||||  |||||||||||| ||||||| |||||| ||||||||||||| ||||||||     
T  15476503 ctaacatttttgaattaaaactaacggaaaagaccaaaatgtgtaacgaagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaagc 15476602  T
Q  176 gatactacctaaatagttagggaccaaaaatgcaatttaacct 218  Q
    ||||||||||||||| ||| ||  | |||||||||||||||||    
T  15476603 gatactacctaaataattaagggactaaaatgcaatttaacct 15476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 190
Target Start/End: Complemental strand, 31909080 - 31908958
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||| ||||| ||||||||||| |||||||| || |||||||||||||||||||||| ||||| |||||||||||||| |    
T  31909080 aagaaaacctaacgtttttgaattgaaactaacggaaatgaccaaaatgtgcaatagagagaagttaagggaccaaaataaattgaattttaattaaggg 31908981  T
Q  168 accaaagtgatactacctaaata 190  Q
    | ||||| |||||||||||||||    
T  31908980 atcaaagcgatactacctaaata 31908958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 25923268 - 25923119
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| || ||||||   ||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||  |    
T  25923268 aagaaaacctaacgtttttgaattaaaactaacagaaatggtaaaaatgtataacggagagaagttaagagaccaaaataaatcgaattttaattaaagg 25923169  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaac 216  Q
    ||||||  |||||||||||||||||| ||||| ||||||| |||||||||    
T  25923168 accaaaccgatactacctaaatagttaagggatcaaaaatacaatttaac 25923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 68 - 215
Target Start/End: Complemental strand, 5624529 - 5624381
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||| ||| ||| |||||   |||| ||||||||||||||||||||| |||||| ||||||||||||| |    
T  5624529 aagaaaacctaacgtttttgaattaaaactaacgaaaaggaccaaaattgataacggagagaagttaagggaccaaaataaatcaaattttaattaaggg 5624430  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaa 215  Q
    ||||||  |||||||||||||||||| || |||||||||| ||||||||    
T  5624429 accaaaacgatactacctaaatagttaagagaccaaaaatacaatttaa 5624381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 84 - 222
Target Start/End: Original strand, 7399330 - 7399470
Alignment:
Q  84 tttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactac 183  Q
    ||||||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||| ||||||||    
T  7399330 tttgaataaaaactaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactac 7399429  T
Q  184 ctaaatagtt-agggac-caaaaatgcaatttaacctttta 222  Q
    ||||||| || ||||||  ||||||||| |||| |||||||    
T  7399430 ctaaataattaagggacaaaaaaatgcagtttagcctttta 7399470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 43569930 - 43570154
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaa-tttcataagaaaatc---------taacgtttttgaat 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||| ||||| ||||||||          ||||||||||||||    
T  43569930 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcacataaaaaatttcaaaagaaaatgaagaaaacttaacgtttttgaat 43570029  T
Q  91 taaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaata 190  Q
     |||||| |  |||||||  |||||||||||| |||||||||||| ||  |||| |||||| ||||||||||||| || ||||| ||| ||| |||||||    
T  43570030 caaaactaatcgaaatgatcaaaatgtgtaacggagagaagttaatgggacaaaataaatcaaattttaattaagggaacaaagcgatgctatctaaata 43570129  T
Q  191 gtt-agggaccaaaaatgcaattta 214  Q
    ||| |||||| |||||| |||||||    
T  43570130 gttaagggacaaaaaatacaattta 43570154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 205
Target Start/End: Original strand, 5152780 - 5152989
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttc-------at-aagaaaatctaacgtttttgaattaaaac 96  Q
    |||| ||||| |||||||||| |||||| |||||||||||||| | ||| |||||||| |        || ||||||| |||||||||||||||||||||    
T  5152780 tcttcttcatcttcatatcatatccatcgaccttcaacaacaaaagtccaagaaaaatctagaagaaaatgaagaaaacctaacgtttttgaattaaaac 5152879  T
Q  97 ttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-ag 195  Q
      ||||||||||| ||||||||||||| |||||| |||||  |||||| |||||| ||||||||||||| |||||||| |||||||  ||||||||| ||    
T  5152880 caacggaaatgaccaaaatgtgtaacaaagagaaattaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaaataaatagttaag 5152979  T
Q  196 ggaccaaaaa 205  Q
    ||||||||||    
T  5152980 ggaccaaaaa 5152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 32272084 - 32272223
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    ||||||||||| |||||||||| ||| ||||||  ||||| | ||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||     
T  32272084 ctaacgtttttaaattaaaactaacgaaaatgaacaaaatatataacatagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagc 32272183  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||| || |||||||||| || ||||||||||||||||||    
T  32272184 gatattatctaaatagttaagagaccaaaaatgcaattta 32272223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 219
Target Start/End: Original strand, 14143668 - 14143893
Alignment:
Q  4 ctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaa 94  Q
    ||||||||||| || ||||||||| ||||||| ||||||||||||||| |||  |||||| || ||||||||         ||||  ||||| |||||||    
T  14143668 ctctttttcatctttatatcatctacatcaacgttcaacaacaagaattccaagaaaattccagaagaaaatggagaaaccctaatattttttaattaaa 14143767  T
Q  95 acttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt- 193  Q
    | | ||  || |||| |||||||||||||||||||||||||| ||||||| |||||  ||||||||| ||| ||||||||| ||||||| |||||||||     
T  14143768 attaacaaaagtgaccaaaatgtgtaacagagagaagttaagagaccaaaataaattaaattttaatgaagagaccaaagtaatactacttaaatagtta 14143867  T
Q  194 agggaccaaaaatgcaatttaacctt 219  Q
    | ||||||||||||||||||| ||||    
T  14143868 aaggaccaaaaatgcaatttagcctt 14143893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 220
Target Start/End: Original strand, 15670387 - 15670540
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| |  |||| ||| || ||||||||   |||||||||||||||||||| |||||  ||||||||||||       
T  15670387 aagaaaatctaacgtttttgaattaaaactaatcgaaaggaccaacatgtgtaatgcagagaagttaagggaccaaaataaataaaattttaattaaata 15670486  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    ||||||  |||||||||||||||||| ||||||||||||| |||||||||||||    
T  15670487 accaaaacgatactacctaaatagttaagggaccaaaaatacaatttaaccttt 15670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 33763055 - 33762904
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagt--taagggaccaaagtaaatcgaattttaa-ttaa 164  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||  ||||||| |||| ||||||||||||||| ||||    
T  33763055 aagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatatgtaacagagagaagttataagggatcaaaataaatcgaattttaatttaa 33762956  T
Q  165 gcgaccaaagtgatactacctaaatagtta--gggaccaaaaatgcaattta 214  Q
    | |||||||| ||||||||||||||| |||  |||||||| |||||| ||||    
T  33762955 gggaccaaagcgatactacctaaataattaaggggaccaagaatgcatttta 33762904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 8418435 - 8418567
Alignment:
Q  83 ttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatacta 182  Q
    |||| |||||||||| || ||||  || ||||||| ||||||||| ||||||||||| |||| |||||||||||||||||||  |||||||| |||||||    
T  8418435 tttttaattaaaactaacagaaagaaccaaaatgtataacagagaaaagttaagggatcaaaataaatcgaattttaattaacggaccaaagcgatacta 8418534  T
Q  183 cctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||||||| |||||||||||||||||||||    
T  8418535 cctaaatagttaagggaccaaaaatgcaattta 8418567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 220
Target Start/End: Original strand, 40774574 - 40774726
Alignment:
Q  69 agaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcga 168  Q
    |||||| |||||||||||||||||||||| ||| ||||||| ||||||||| ||  |||||| | ||||||||||| |||||||||||||||||||| ||    
T  40774574 agaaaacctaacgtttttgaattaaaactaacgaaaatgaccaaaatgtgtgacgtagagaaataaagggaccaaaataaatcgaattttaattaaggga 40774673  T
Q  169 ccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttt 220  Q
    | |||| ||||||| ||||||| || ||| | ||||||||||||||| |||||    
T  40774674 ctaaagcgatactagctaaataattaaggaatcaaaaatgcaatttagccttt 40774726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 334456 - 334530
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  334456 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaat 334530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 76 - 212
Target Start/End: Complemental strand, 28391911 - 28391773
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaa-gttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||| |||||||||||||||| ||  ||| ||| |||||||||||  ||||||| ||||||||| |||| ||||||||| |||||||||| ||||||||    
T  28391911 ctaacatttttgaattaaaactaactaaaaggaccaaaatgtgtaatggagagaaagttaagggatcaaaataaatcgaactttaattaagggaccaaag 28391812  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatt 212  Q
    | ||||| ||||||||||| |||||||||||||||||||    
T  28391811 taatactgcctaaatagttaagggaccaaaaatgcaatt 28391773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 218
Target Start/End: Complemental strand, 15267389 - 15267241
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||||||||| |||  ||||||||||| |  |||||||  |||||||||||  ||||||||||||||| ||||| |||||| ||||||||||||  |    
T  15267389 aagaaaatctaacattt--gaattaaaactaatagaaatgagcaaaatgtgtaattgagagaagttaaggggccaaaataaatcaaattttaattaaagg 15267292  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
    ||||||  |||||||||| ||||||| |||||||||||||||||||||||||    
T  15267291 accaaaacgatactacct-aatagttaagggaccaaaaatgcaatttaacct 15267241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 224
Target Start/End: Original strand, 5088386 - 5088521
Alignment:
Q  90 ttaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    |||||||| || |||| ||| ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||   |||||||| ||||||||||||||    
T  5088386 ttaaaactaacagaaaggaccaaaatgtgtaacaaaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaat 5088485  T
Q  190 agtt-agggaccaaaaatgcaatttaaccttttatt 224  Q
    |||| || |||||||||| ||||||| ||| |||||    
T  5088486 agttaagagaccaaaaatacaatttagcctattatt 5088521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41859903 - 41859790
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataaga---------aaatctaacgtttttgaatt 91  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||         ||||||||||||||||||||    
T  41859903 ctcctctttttcatcttcatatcatctccatcaaccttcaacaacatgaatcatagaaaaatttcataagaaaatgaagaaaatctaacgtttttgaatt 41859804  T
Q  92 aaaacttacggaaa 105  Q
    |||||| |||||||    
T  41859803 aaaactaacggaaa 41859790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 5624539 - 5624672
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttca--------taagaaaatctaacgtttttgaatta 92  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||         || |||||||||| |||||||||||    
T  5624539 ctcctatttttcatattcatatcatcttcatcaaccttcaacaacaagattcccagaaaaatttcagaaaaaatcaaaaaaatctaacttttttgaatta 5624638  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagag 126  Q
    ||||| |||||||  || ||||||||||||||||    
T  5624639 aaactaacggaaagaaccaaaatgtgtaacagag 5624672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 21750901 - 21750813
Alignment:
Q  127 agaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||| ||||||||    
T  21750901 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaaggcaattta 21750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 14052031 - 14051888
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagt 175  Q
    |||||||||||||||||||||| |  |||| ||| |||||||||||| |||| ||||| ||| |||||| |||||||||||||||||||   ||||||      
T  14052031 ctaacgtttttgaattaaaactaattgaaaggaccaaaatgtgtaacggagaaaagttcaggaaccaaaataaatcgaattttaattaaaaaaccaaaac 14051932  T
Q  176 gatactacctaaatagtt-agggaccaaaaatgcaatttaacct 218  Q
     ||| ||||||||||||| || |||||||||| |||||||||||    
T  14051931 aatattacctaaatagttaagagaccaaaaatacaatttaacct 14051888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 204
Target Start/End: Original strand, 17736529 - 17736620
Alignment:
Q  114 atgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaa 204  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||    
T  17736529 atgtgtaacagagagaatttaagagaccaaaataaatcgaattttaattaatggaccaaagcgatactacctaaatagttaagggaccaaaa 17736620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 17861188 - 17861050
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||  ||||||||||||||||||||| ||||||  ||| |||||||||| |  ||||||||||||| |||||| |||||||||||||||||||| |    
T  17861188 aagaaaacttaacgtttttgaattaaaactaacggaatggaccaaaatgtgtaccgaagagaagttaagg-accaaaataaatcgaattttaattaaggg 17861090  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaat 206  Q
    |||||||  | | ||||||||||||| | |||||||||||    
T  17861089 accaaagcaacattacctaaatagttaaaggaccaaaaat 17861050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 36752138 - 36752284
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| ||||| ||||| |||||||||  | | ||| ||| |||||||| |||| ||||||||||| |||||||| |||||||||||||||||||| |    
T  36752138 aagaaaacctaacttttttaaattaaaaccaatgaaaaggaccaaaatgtgcaacaaagagaagttaatggaccaaaataaatcgaattttaattaag-g 36752236  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |   ||| |||||||| ||||||||| |||||||||||||||||||||    
T  36752237 attgaagcgatactacataaatagttaagggaccaaaaatgcaattta 36752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 42710486 - 42710353
Alignment:
Q  82 tttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatact 181  Q
    |||||||||||||||| ||  ||| ||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||   || |||| ||||||    
T  42710486 tttttgaattaaaactaacataaaggaccaaaatgtgtaacatagagaagttaatggaccaaaataaatcgaattttaattaaagaactaaagcgatact 42710387  T
Q  182 acctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||| |||||||| |  ||| ||||||||||||||    
T  42710386 accgaaatagttaaatgactaaaaatgcaattta 42710353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 14143658 - 14143509
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||| ||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||| |||| ||| |||||| ||||||||||||       
T  14143658 aagaaaacctaatgtttttgaattaaaactaacggaaaagaccaaaatgtgtaacggagagaagttaa-ggactaaaataaatc-aattttaattaa-aa 14143562  T
Q  168 accaaagtgatactacctaaatagttagggaccaaaaatgcaatttaaccttt 220  Q
    ||||||  ||||||| ||||||||||| ||  |||||||  |||||| |||||    
T  14143561 accaaaacgatactatctaaatagttaagggacaaaaatataatttagccttt 14143509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 125 - 221
Target Start/End: Original strand, 3879305 - 3879402
Alignment:
Q  125 agagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    |||||||||||| ||||||| |||||| |||||||| |||   |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  3879305 agagaagttaagagaccaaaataaatcaaattttaaataatgaaccaaagtcatactacttaaatagttaagggaccaaaaatgcaatttagcctttt 3879402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 214
Target Start/End: Complemental strand, 5152766 - 5152619
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaa-cagagagaagttaagggaccaaagtaaatcgaattttaattaagc 166  Q
    ||||||| |||| ||||||||||||||||| ||  ||| ||| |||||||||||  ||| || |||||||  |||||| |||||| |||||||||||||     
T  5152766 aagaaaacctaaagtttttgaattaaaactaacaaaaaggaccaaaatgtgtaagaagatag-agttaagataccaaaataaatcaaattttaattaagg 5152668  T
Q  167 gaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||||| ||||||  || |||||| |||||||||||||||||||||    
T  5152667 ggccaaagtcatactaattacatagttaagggaccaaaaatgcaattta 5152619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 26289257 - 26289400
Alignment:
Q  69 agaaaatctaacgtttttgaattaaaa-cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||| |||||||||||||||||||| |  ||| ||| ||| |||||||| ||  |||||||||||||| | |||| | |||||||||||||||||| |    
T  26289257 agaaaacctaacgtttttgaattaaaaaccaacgaaaaggacaaaaatgtgcaatggagagaagttaagg-atcaaaatgaatcgaattttaattaaggg 26289355  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaat 211  Q
    ||||||  |||||||  ||||||||| | ||||||||||||||||    
T  26289356 accaaaacgatactatttaaatagttaaaggaccaaaaatgcaat 26289400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 5460260 - 5460183
Alignment:
Q  146 taaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttta 222  Q
    |||||||||||||||||||| |||||||| ||||||  |||||||||| ||||||||||||| ||||||| |||||||    
T  5460260 taaatcgaattttaattaagggaccaaagcgatactgtctaaatagttaagggaccaaaaatacaatttagcctttta 5460183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 3878645 - 3878715
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||| |||| |||||| || ||||||||    
T  3878645 tcttttttatcttcatatcatctccatcaactttcaacaacaagaattccaggaaaattccagaagaaaat 3878715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 225
Target Start/End: Original strand, 2597328 - 2597478
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    ||||||||||| |||||||  | ||||||||||| |||| |||||||| |||| ||||||| |||||||| |||||| || |||| ||||| |||||||     
T  2597328 ctaacgttttt-aattaaatttaacggaaatgaccaaaacgtgtaacaaagagaaagttaaaggaccaaaataaatcaaaatttagttaagagaccaaac 2597426  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttattt 225  Q
      | || |  ||||||||| ||||||||||||   |||||||||||||||||    
T  2597427 caaaaccaattaaatagttaagggaccaaaaagataatttaaccttttattt 2597478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 5460272 - 5460332
Alignment:
Q  158 taattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacc 217  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||    
T  5460272 taattaagggaccaaagcgatactatctaaatagttaagggaccaaaaatacaatttaacc 5460332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21751011 - 21750952
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatt 63  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||| | |||||||    
T  21751011 ctcctctttttcatttt---atcatctctatcaaccttcaacaacaagaatcctaaaaaaatt 21750952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 219
Target Start/End: Original strand, 19185514 - 19185636
Alignment:
Q  99 acggaaatgactaaaatgtgtaacagagagaagtt-aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
    ||||||| ||||||||   ||||||||||||| || ||||||||||| |||||| ||||||| ||| | |||||||   ||||||  ||||||||| |||    
T  19185514 acggaaaggactaaaagtagtaacagagagaaatttaagggaccaaaataaatcaaattttagttaggggaccaaaccaatactaattaaatagttaagg 19185613  T
Q  197 gaccaaaaatgcaatttaacctt 219  Q
    ||||||||| | |||||| ||||    
T  19185614 gaccaaaaaggtaatttagcctt 19185636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 19615465 - 19615421
Alignment:
Q  175 tgatactacctaaatagtta-gggaccaaaaatgcaatttaacct 218  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  19615465 tgatactacctaaatagtcaagggaccaaaaatgcaatttaacct 19615421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 11433 - 11228
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaact 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||         ||||||||||||||||||||||    
T  11433 tttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaataattccagaagaaaatgaagaaaacctaacgtttttgaattaaaact 11334  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agg 196  Q
     ||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||  ||||||||||||||||| |||    
T  11333 aacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggacgaaagcaatactacctaaatagttaagg 11234  T
Q  197 gaccaa 202  Q
    ||||||    
T  11233 gaccaa 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 11450 - 11604
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |    
T  11450 aagaaaacctaacgtttttgaattaaaactaatggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaaggg 11549  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
    ||||||| |||||||||||||||||| |||||  |||||||||||||| ||||||    
T  11550 accaaagcgatactacctaaatagttaagggataaaaaatgcaatttagcctttt 11604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 1701 - 1483
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||         ||||||| ||||||||    
T  1701 ctcctctttttcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaatt 1602  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| ||||||||||| ||| ||||||||| ||||||||||||||| |||| |||||| ||||||||||||| |||||| | ||||||||||||||||    
T  1601 aaaactaacggaaatgaccaaa-tgtgtaacaaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaatgcgatactacctaaatag 1503  T
Q  192 tt-agggaccaaaaatgcaa 210  Q
    || || ||| ||||||||||    
T  1502 ttaagtgacaaaaaatgcaa 1483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 1711 - 1815
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||| |    
T  1711 aagaaaacctaacgtttttgaattaaaattaaccgaaatgaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcg-attttaattaaggg 1809  T
Q  168 accaaa 173  Q
    ||||||    
T  1810 accaaa 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 214
Target Start/End: Original strand, 4487 - 4701
Alignment:
Q  10 ttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaacttac 100  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||||   ||||||| || ||||||||         |||||||||||||||||||||| ||    
T  4487 ttcatcttcatatcatctccatcaatcttcagcaacaataatcctgaaaaaattccagaagaaaatgaagaaaacctaacgtttttgaattaaaactaac 4586  T
Q  101 ggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggac 199  Q
    ||||| ||| ||||| ||| ||||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  4587 ggaaaggaccaaaatctgtgacagagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggac 4686  T
Q  200 caaaaatgcaattta 214  Q
    |||||||||||||||    
T  4687 caaaaatgcaattta 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 68 - 219
Target Start/End: Complemental strand, 4488 - 4336
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||||| ||||||| |||||| ||||| |||||||      
T  4488 aagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacggagtgaagttaagagaccaaaataaatcaaatttcaattaagga 4389  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  4388 accaaagtgatagtacctaaatagttaagggaccaaaaatgcaatttaacctt 4336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 11723 - 11870
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| |||||||| || ||||| | |||||||||||||||||||||||||| |||||||||||||||||||  |    
T  11723 aagaaaacctaacgtttttgaattaaaactaacggaaataaccaaaatatataacagagagaagttaagggaccaaaataaatcgaattttaattaaagg 11822  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||    
T  11823 accaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 11709 - 11491
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaa--------atctaacgtttttgaattaaaac 96  Q
    |||||| ||| || ||||||||||||||||| |||||||| |||||||  |||||||||  ||||||||        ||||||||||||| |||||||||    
T  11709 tcttttgcatcttaatatcatctccatcaacattcaacaagaagaatcttagaaaaattctataagaaatgaggaaaatctaacgtttttaaattaaaac 11610  T
Q  97 ttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-ag 195  Q
    | ||| ||| ||| ||||| || ||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||  |||||||||| ||    
T  11609 taacgaaaaagaccaaaatatgcaacggagagaagttaagggactaaaataaatcgaattttaattaagggaccaaagcgatactttctaaatagttaag 11510  T
Q  196 ggaccaaaaatgcaattta 214  Q
    |||||||||||||||||||    
T  11509 ggaccaaaaatgcaattta 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 40588 - 40735
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||||||| | |||||| |||||||||||||||||||| |    
T  40588 aagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacggagagaagttaatgaaccaaaataaatcgaattttaattaaggg 40687  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||    
T  40688 accaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 40735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 5 - 214
Target Start/End: Complemental strand, 40574 - 40355
Alignment:
Q  5 tctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatc---------taacgtttttgaattaaaa 95  Q
    |||||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||||||          |||||||||||||||||||    
T  40574 tctttttcatcttcatatcatctccatcaacctttaacaaaaagaatcccataaaaatttcagaagaaaatgaagaaaacttaacgtttttgaattaaaa 40475  T
Q  96 cttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-a 194  Q
    || |||||||  || ||||| ||||||  |||| | |||||||||| || |||||| ||||||||||||| ||| |||| ||||||| ||||||| || |    
T  40474 ctaacggaaagaaccaaaatctgtaacgtagagtaattaagggaccgaaataaatcaaattttaattaagggactaaagcgatactatctaaataattaa 40375  T
Q  195 gggaccaaaaatgcaattta 214  Q
    |||||||||||| |||||||    
T  40374 gggaccaaaaatacaattta 40355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 65889 - 65730
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||| |||| |||||||||||||||||||| |    
T  65889 aagaaaacctaacgttttggaattaaaactaacggaaatgaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcgaattttaattaagag 65790  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    |||||||  ||| ||||||||||||| || ||||||||||||| ||||||| ||| ||||    
T  65789 accaaagcaatattacctaaatagttaagagaccaaaaatgcagtttaaccatttgtttt 65730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 73221 - 73062
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||  |||||||||||||||| |||| |||||||||||||||||||| |    
T  73221 aagaaaacctaacgttttggaattaaaactaacggaaatgaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcgaattttaattaagag 73122  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaaccttttatttt 226  Q
    |||||||  ||| ||||||||||||| || ||||||||||||| ||||||| ||| ||||    
T  73121 accaaagcaatattacctaaatagttaagagaccaaaaatgcagtttaaccatttgtttt 73062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 65899 - 66122
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||         ||||| ||||||||||    
T  65899 ctcctctttttcattttcatattatctctatcaatcttcaacaacaataattccagaaaaatttcagaagaaaatgaagaaaacctaacatttttgaatt 65998  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |   ||| ||| ||||| ||||||| |||||||||||||||| ||| ||||| ||||||||||||||  || |||  ||||||||||||||||    
T  65999 aaaactaataaaaaggaccaaaatatgtaacaaagagaagttaagggactaaaataaattgaattttaattaaggaactaaaacgatactacctaaatag 66098  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||| ||||||    
T  66099 ttaagcgaccaaaaatgtaattta 66122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 73231 - 73454
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaatt 91  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||| ||| |||||||||||||| ||||||||         ||||| ||||||||||    
T  73231 ctcctctttttcattttcatattatctctatcaatcttcaacaacaataattccagaaaaatttcagaagaaaatgaagaaaacctaacatttttgaatt 73330  T
Q  92 aaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatag 191  Q
    |||||| |   ||| ||| ||||| ||||||| |||||||||||||||| ||| ||||| ||||||||||||||  || |||  ||||||||||||||||    
T  73331 aaaactaataaaaaggaccaaaatatgtaacaaagagaagttaagggactaaaataaattgaattttaattaaggaactaaaacgatactacctaaatag 73430  T
Q  192 tt-agggaccaaaaatgcaattta 214  Q
    || || ||||||||||| ||||||    
T  73431 ttaagcgaccaaaaatgtaattta 73454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 45072 - 45219
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| | |||||| | ||||||||||| |    
T  45072 aagaaaacctaacgtttttgaattaaaactaacgaaaatgaccaaaatgtgtaacaaagagaagttaagggaccacaataaatcaatttttaattaaggg 45171  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | ||||| |||| ||||||||||||| |||||| ||||||||||||||    
T  45172 agcaaagcgataatacctaaatagttaagggactaaaaatgcaattta 45219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 45062 - 44988
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  45062 ctcctctttttaattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaattttcagaagaaaat 44988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 177301 - 177448
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||  ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |    
T  177301 aagaaaacctaacgtttttgaattaaaactaacggaaaggaacaaaatgtgtaacatagagaagttaagggatcaaaataaatcgaattttaattaaggg 177400  T
Q  168 accaaagtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
    | | |  ||||| |||||||||| || |||||||||||||||||||||    
T  177401 atcgatctgataatacctaaataattaagggaccaaaaatgcaattta 177448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 177281 - 177228
Alignment:
Q  22 tcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat 75  Q
    |||||||| |||| |||||||||||||||||||| ||||||| || ||||||||    
T  177281 tcatctccttcaatcttcaacaacaagaatcccataaaaattccagaagaaaat 177228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 91033 - 90811
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaat-ttcat----------aagaaaatctaacgtttttgaa 89  Q
    ||||| |||||||| |||||||||||||||||| |||||||||||||||||| || |||||  ||| |          ||||||| ||||   |||||||    
T  91033 ctcctatttttcatcttcatatcatctccatcacccttcaacaacaagaatctcaaaaaaaaattcctgaagaaaatgaagaaaacctaataattttgaa 90934  T
Q  90 ttaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaat 189  Q
    |||||||| ||||||| ||| ||||||||||| ||| ||||||||||  |||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  90933 ttaaaactaacggaaaggaccaaaatgtgtaagagaaagaagttaagttaccaaaataaatcaaatttcaattaagggacaaaagcgatactacctaaat 90834  T
Q  190 agtt-agggaccaaaaatgcaat 211  Q
    |||| |||||| |||||||||||    
T  90833 agttaagggactaaaaatgcaat 90811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 91674 - 91841
Alignment:
Q  7 tttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat---------ctaacgtttttgaattaaaact 97  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||| |  ||||||||         |||| | |||||||||||||||    
T  91674 tttttcatcttcatatcatctccatcacccttcaacaacaagaatcccaaaaaaattcctgaagaaaatgaagaaaacctaatgattttgaattaaaact 91773  T
Q  98 tacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaag 165  Q
     ||||||| ||| |||||||| || ||| ||||||||||  |||||| |||||| |||||||||||||    
T  91774 aacggaaaggaccaaaatgtgcaagagaaagaagttaagttaccaaaataaatcaaattttaattaag 91841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 11818 - 11713
Alignment:
Q  68 aagaaaatctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaagttaagggaccaaagtaaatcgaattttaattaagcg 167  Q
    ||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| ||||||| | ||| |    
T  11818 aagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagtcaaggg 11719  T
Q  168 accaaa 173  Q
    ||||||    
T  11718 accaaa 11713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Complemental strand, 11723 - 11637
Alignment:
Q  134 aagggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagtt-agggaccaaaaatgcaatttaacctt 219  Q
    ||||||||||| |||||| ||||||| ||||| |||||||| |||| ||||||||||||| ||| | ||||||||||||||| ||||    
T  11723 aagggaccaaaataaatcaaattttagttaagggaccaaagcgataatacctaaatagttaaggtatcaaaaatgcaatttagcctt 11637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 93332 - 93191
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgt-aacagagag-aagttaagggaccaaagtaaatcgaattttaattaagcgaccaaa 173  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||| ||||||||| ||||||||  |||||| |||||| ||||||||||||| ||| |||    
T  93332 ctaacgtttttgaattaaaactaacgtaaaggaccaaaatgtgtaaacagagagaaagttaagataccaaaataaatcaaattttaattaagtgactaaa 93233  T
Q  174 gtgatactacctaaatagtt-agggaccaaaaatgcaattta 214  Q
      |||||||  ||||||||| ||||||||||||| |||||||    
T  93232 acgatactaattaaatagttaagggaccaaaaatacaattta 93191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 93350 - 93509
Alignment:
Q  1 ctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaat--------ctaacgtttttgaatta 92  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||   |||||||||  | ||||||||        ||| |||||||||||||    
T  93350 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaataatttgagaaaaattcaagaagaaaatgaaaaaccctaccgtttttgaatta 93449  T
Q  93 aaacttacggaaatgactaaaatgtgtaacagagag-aagttaagggaccaaagtaaatc 151  Q
    ||||| ||||||||||  ||||||||||||  |||| ||||||||  |||||| ||||||    
T  93450 aaactaacggaaatgatcaaaatgtgtaacgaagagaaagttaagataccaaattaaatc 93509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 26048 - 25964
Alignment:
Q  137 ggaccaaagtaaatcgaattttaattaagcgaccaaagtgatactacctaaatagttagg-gaccaaaaatgcaatttaaccttt 220  Q
    |||||||| |||||||| ||||||||||| || ||||||||||| | ||| ||||||||| |||||||| |||||||||||||||    
T  26048 ggaccaaaataaatcgagttttaattaagggatcaaagtgataccaactacatagttaggagaccaaaagtgcaatttaaccttt 25964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 10863 - 11010
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacagagagaag-ttaagggaccaaagtaaatcgaattttaattaagcgaccaaag 174  Q
    |||||||||||  | ||||| | |||||||  |||||||   |||||||| ||||  ||||||||||||| |||||| ||||||| ||| | |||||||     
T  10863 ctaacgtttttttaataaaattaacggaaagaactaaaagtggtaacagaaagaaacttaagggaccaaaataaatcaaattttagttaggggaccaaac 10962  T
Q  175 tgatactacctaaatagtt-agggaccaaaaatgcaatttaacctttt 221  Q
     |||||||  ||||||||| ||||||||||||  ||||| ||||||||    
T  10963 cgatactaattaaatagttaagggaccaaaaagacaattaaacctttt 11010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 6148 - 6107
Alignment:
Q  3 cctctttttcattttcatatcatctccatcaaccttcaacaa 44  Q
    |||||| ||||| |||||||||||| ||||||||||||||||    
T  6148 cctcttcttcatcttcatatcatcttcatcaaccttcaacaa 6107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 90302 - 90254
Alignment:
Q  76 ctaacgtttttgaattaaaacttacggaaatgactaaaatgtgtaacag 124  Q
    |||| |||||||||||||||||  |||||| || |||||||||||||||    
T  90302 ctaaagtttttgaattaaaactagcggaaaagaataaaatgtgtaacag 90254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University