View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1411-Insertion-5 (Length: 338)

Name: NF1411-Insertion-5
Description: NF1411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1411-Insertion-5
NF1411-Insertion-5
[»] chr3 (40 HSPs)
chr3 (64-338)||(50980141-50980416)
chr3 (64-338)||(51083275-51083550)
chr3 (10-52)||(7974533-7974575)
chr3 (11-49)||(50980073-50980111)
chr3 (11-49)||(51083207-51083245)
chr3 (11-52)||(20413774-20413815)
chr3 (10-54)||(10498716-10498760)
chr3 (10-54)||(48315045-48315089)
chr3 (10-54)||(52535886-52535930)
chr3 (10-53)||(10843802-10843845)
chr3 (11-54)||(21628910-21628953)
chr3 (10-53)||(27185474-27185517)
chr3 (10-61)||(35863834-35863885)
chr3 (10-52)||(19126547-19126589)
chr3 (8-54)||(33633337-33633383)
chr3 (8-50)||(42269298-42269340)
chr3 (8-54)||(48376831-48376877)
chr3 (8-54)||(53633636-53633682)
chr3 (8-53)||(2186446-2186491)
chr3 (8-53)||(5117205-5117250)
chr3 (8-49)||(33404229-33404270)
chr3 (8-53)||(38108475-38108520)
chr3 (10-54)||(1149090-1149134)
chr3 (10-54)||(14894708-14894752)
chr3 (10-54)||(16980375-16980419)
chr3 (10-54)||(18870746-18870790)
chr3 (10-54)||(21331438-21331482)
chr3 (10-54)||(21506779-21506823)
chr3 (10-54)||(22722398-22722442)
chr3 (10-50)||(23147999-23148039)
chr3 (10-54)||(25340945-25340989)
chr3 (22-54)||(27999730-27999762)
chr3 (10-54)||(29631182-29631226)
chr3 (10-54)||(30050449-30050493)
chr3 (10-54)||(43345028-43345072)
chr3 (10-54)||(44579632-44579676)
chr3 (10-54)||(48531274-48531318)
chr3 (10-54)||(48796239-48796283)
chr3 (10-50)||(53996299-53996339)
chr3 (10-50)||(55066621-55066661)
[»] chr6 (22 HSPs)
chr6 (178-242)||(32015729-32015793)
chr6 (8-54)||(9311949-9311995)
chr6 (10-54)||(5655328-5655372)
chr6 (10-54)||(12333589-12333633)
chr6 (10-54)||(20744134-20744178)
chr6 (10-54)||(32053784-32053828)
chr6 (10-53)||(2473600-2473643)
chr6 (11-54)||(8211620-8211663)
chr6 (10-53)||(9444772-9444815)
chr6 (8-51)||(24248164-24248207)
chr6 (10-53)||(24269880-24269923)
chr6 (8-53)||(6799637-6799682)
chr6 (10-51)||(26400863-26400904)
chr6 (10-54)||(4494892-4494936)
chr6 (178-238)||(7445462-7445522)
chr6 (8-53)||(8311465-8311512)
chr6 (10-54)||(8810636-8810680)
chr6 (10-54)||(9677231-9677275)
chr6 (10-54)||(17382080-17382124)
chr6 (8-52)||(20720800-20720844)
chr6 (10-54)||(21847190-21847234)
chr6 (10-50)||(22414469-22414509)
[»] chr7 (33 HSPs)
chr7 (10-54)||(40752860-40752904)
chr7 (10-60)||(10244717-10244767)
chr7 (10-54)||(39801702-39801746)
chr7 (10-53)||(429199-429242)
chr7 (11-54)||(5352325-5352368)
chr7 (11-54)||(5526721-5526764)
chr7 (11-58)||(21164780-21164827)
chr7 (11-54)||(48980483-48980526)
chr7 (8-54)||(1120050-1120096)
chr7 (10-52)||(30463970-30464012)
chr7 (8-54)||(43498484-43498530)
chr7 (10-51)||(5833041-5833082)
chr7 (8-49)||(24656971-24657012)
chr7 (10-51)||(26816685-26816726)
chr7 (10-54)||(3953437-3953481)
chr7 (10-54)||(5584643-5584687)
chr7 (10-54)||(5589603-5589647)
chr7 (10-54)||(8683066-8683110)
chr7 (10-54)||(14046632-14046676)
chr7 (10-54)||(14356662-14356706)
chr7 (10-54)||(19416510-19416554)
chr7 (11-51)||(20149715-20149755)
chr7 (14-54)||(20243251-20243291)
chr7 (10-50)||(21105603-21105643)
chr7 (10-54)||(22600427-22600471)
chr7 (10-54)||(27462457-27462501)
chr7 (10-54)||(34369475-34369519)
chr7 (10-54)||(35142170-35142214)
chr7 (10-54)||(38088038-38088082)
chr7 (10-54)||(41527556-41527600)
chr7 (10-54)||(43629099-43629143)
chr7 (10-54)||(44558795-44558839)
chr7 (10-54)||(46737781-46737825)
[»] chr2 (32 HSPs)
chr2 (8-54)||(15381629-15381675)
chr2 (10-54)||(22523033-22523077)
chr2 (8-50)||(4238759-4238801)
chr2 (8-54)||(8761583-8761629)
chr2 (8-54)||(18678133-18678179)
chr2 (10-54)||(9383230-9383274)
chr2 (10-54)||(10195683-10195727)
chr2 (10-54)||(31543008-31543052)
chr2 (10-45)||(15617657-15617692)
chr2 (11-54)||(27934879-27934922)
chr2 (10-53)||(44496721-44496764)
chr2 (8-54)||(346143-346189)
chr2 (10-52)||(12599886-12599928)
chr2 (11-53)||(29599936-29599978)
chr2 (16-54)||(32063615-32063653)
chr2 (8-54)||(41939127-41939173)
chr2 (12-54)||(44526124-44526166)
chr2 (10-51)||(10156016-10156057)
chr2 (10-55)||(34464430-34464475)
chr2 (10-54)||(2256967-2257011)
chr2 (10-54)||(4122034-4122078)
chr2 (8-56)||(10109665-10109713)
chr2 (10-54)||(13787551-13787595)
chr2 (10-54)||(16877120-16877164)
chr2 (10-54)||(16989251-16989295)
chr2 (10-54)||(20455887-20455931)
chr2 (10-54)||(32513670-32513714)
chr2 (10-54)||(33063982-33064026)
chr2 (14-50)||(33117430-33117466)
chr2 (8-56)||(34191327-34191375)
chr2 (10-54)||(34977200-34977244)
chr2 (8-48)||(43826461-43826501)
[»] chr1 (33 HSPs)
chr1 (8-45)||(52279514-52279551)
chr1 (10-54)||(1794592-1794636)
chr1 (8-54)||(40268206-40268252)
chr1 (10-54)||(27449466-27449510)
chr1 (10-54)||(42045393-42045437)
chr1 (8-52)||(43611422-43611466)
chr1 (8-59)||(15602196-15602247)
chr1 (11-54)||(27127220-27127263)
chr1 (8-51)||(41677609-41677652)
chr1 (11-54)||(41769837-41769880)
chr1 (11-54)||(41884827-41884870)
chr1 (8-54)||(2613718-2613764)
chr1 (11-53)||(4295231-4295273)
chr1 (8-54)||(6094418-6094464)
chr1 (10-52)||(24978242-24978284)
chr1 (8-53)||(1834464-1834509)
chr1 (10-51)||(19620575-19620616)
chr1 (10-59)||(25532964-25533013)
chr1 (10-51)||(34263688-34263729)
chr1 (10-51)||(45140027-45140068)
chr1 (10-50)||(8253739-8253779)
chr1 (10-54)||(8269389-8269433)
chr1 (10-54)||(21400044-21400088)
chr1 (10-54)||(24695555-24695599)
chr1 (14-54)||(24752673-24752713)
chr1 (10-54)||(26803472-26803516)
chr1 (10-54)||(27172743-27172787)
chr1 (8-52)||(39252276-39252320)
chr1 (10-54)||(41763176-41763220)
chr1 (10-54)||(48681954-48681998)
chr1 (10-54)||(49183169-49183213)
chr1 (10-54)||(52043269-52043313)
chr1 (10-54)||(52441532-52441576)
[»] chr8 (27 HSPs)
chr8 (10-54)||(33451370-33451414)
chr8 (8-54)||(21557429-21557475)
chr8 (8-52)||(15188897-15188941)
chr8 (10-54)||(23816786-23816830)
chr8 (10-54)||(37938491-37938535)
chr8 (10-54)||(37999441-37999485)
chr8 (8-59)||(35682711-35682762)
chr8 (8-51)||(41625193-41625236)
chr8 (8-54)||(44293571-44293617)
chr8 (10-51)||(7765645-7765686)
chr8 (4-45)||(25163184-25163225)
chr8 (10-54)||(8717496-8717540)
chr8 (22-50)||(11224548-11224576)
chr8 (10-54)||(11708982-11709026)
chr8 (10-54)||(13286127-13286171)
chr8 (10-54)||(13357462-13357506)
chr8 (10-50)||(15572151-15572191)
chr8 (10-54)||(17704009-17704053)
chr8 (10-50)||(18942918-18942958)
chr8 (10-54)||(19163557-19163601)
chr8 (10-54)||(23852907-23852951)
chr8 (10-54)||(27718915-27718959)
chr8 (10-50)||(30427731-30427771)
chr8 (10-54)||(34968551-34968595)
chr8 (10-54)||(39821880-39821924)
chr8 (10-54)||(42113648-42113692)
chr8 (10-54)||(43962045-43962089)
[»] chr4 (40 HSPs)
chr4 (10-54)||(21052578-21052622)
chr4 (11-54)||(36035830-36035873)
chr4 (10-54)||(2186354-2186398)
chr4 (8-52)||(2587719-2587763)
chr4 (10-54)||(15849230-15849274)
chr4 (10-54)||(17728078-17728122)
chr4 (10-54)||(24665012-24665056)
chr4 (10-54)||(37193245-37193289)
chr4 (10-54)||(52270051-52270095)
chr4 (11-54)||(3527386-3527429)
chr4 (10-52)||(5924647-5924689)
chr4 (8-50)||(8464094-8464136)
chr4 (8-50)||(10564484-10564526)
chr4 (8-54)||(11198760-11198806)
chr4 (8-54)||(32006496-32006542)
chr4 (8-54)||(38340339-38340385)
chr4 (10-52)||(43155077-43155119)
chr4 (8-53)||(36569170-36569215)
chr4 (8-53)||(39973170-39973215)
chr4 (11-51)||(2034117-2034157)
chr4 (10-50)||(6087747-6087787)
chr4 (10-54)||(7230276-7230320)
chr4 (8-52)||(8734848-8734892)
chr4 (10-54)||(9946423-9946467)
chr4 (10-54)||(11949784-11949828)
chr4 (10-54)||(12322669-12322713)
chr4 (10-50)||(16743305-16743345)
chr4 (10-50)||(19854565-19854605)
chr4 (10-50)||(20383488-20383528)
chr4 (10-54)||(20799415-20799459)
chr4 (10-54)||(23809945-23809989)
chr4 (10-54)||(24885821-24885865)
chr4 (10-54)||(35021488-35021532)
chr4 (10-50)||(38416057-38416097)
chr4 (10-54)||(38453261-38453305)
chr4 (10-54)||(43034363-43034407)
chr4 (10-54)||(47814272-47814316)
chr4 (10-54)||(50362160-50362204)
chr4 (10-50)||(50442768-50442808)
chr4 (10-50)||(51458678-51458718)
[»] chr5 (33 HSPs)
chr5 (8-54)||(2249435-2249481)
chr5 (10-54)||(20211276-20211320)
chr5 (10-50)||(20927639-20927679)
chr5 (10-54)||(37932326-37932370)
chr5 (10-54)||(39980504-39980548)
chr5 (11-54)||(2839794-2839837)
chr5 (11-54)||(10199015-10199058)
chr5 (11-54)||(11156833-11156876)
chr5 (10-49)||(19068460-19068499)
chr5 (11-54)||(20370152-20370195)
chr5 (8-51)||(26409252-26409295)
chr5 (8-54)||(1512851-1512897)
chr5 (10-56)||(5107266-5107312)
chr5 (8-54)||(17261787-17261833)
chr5 (8-54)||(27219284-27219330)
chr5 (8-54)||(32565520-32565566)
chr5 (10-51)||(6234821-6234862)
chr5 (11-52)||(36818931-36818972)
chr5 (10-54)||(1808614-1808658)
chr5 (10-54)||(5485182-5485226)
chr5 (10-54)||(6489003-6489047)
chr5 (10-54)||(6624772-6624816)
chr5 (10-54)||(15889407-15889451)
chr5 (10-54)||(16036823-16036867)
chr5 (10-54)||(19248475-19248519)
chr5 (10-54)||(22522822-22522866)
chr5 (10-54)||(24485695-24485739)
chr5 (10-62)||(27679486-27679538)
chr5 (10-54)||(28207128-28207172)
chr5 (10-54)||(34436847-34436891)
chr5 (10-54)||(36321515-36321559)
chr5 (10-54)||(36739604-36739648)
chr5 (10-54)||(42505868-42505912)
[»] scaffold0011 (2 HSPs)
scaffold0011 (10-54)||(223154-223198)
scaffold0011 (10-54)||(185259-185303)
[»] scaffold0118 (2 HSPs)
scaffold0118 (10-53)||(39995-40038)
scaffold0118 (10-54)||(45408-45452)
[»] scaffold0040 (2 HSPs)
scaffold0040 (15-54)||(58849-58888)
scaffold0040 (10-54)||(56780-56824)
[»] scaffold0057 (1 HSPs)
scaffold0057 (8-49)||(35179-35220)
[»] scaffold1379 (1 HSPs)
scaffold1379 (10-54)||(1632-1676)
[»] scaffold1063 (1 HSPs)
scaffold1063 (8-52)||(1079-1123)
[»] scaffold0896 (1 HSPs)
scaffold0896 (10-54)||(3137-3181)
[»] scaffold0519 (1 HSPs)
scaffold0519 (22-50)||(5263-5291)


Alignment Details
Target: chr3 (Bit Score: 260; Significance: 1e-145; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 64 - 338
Target Start/End: Original strand, 50980141 - 50980416
Alignment:
Q  64 ttcatcacgagagcaagacaaccatggtccatgatggttgtcttcaggaatattcctagctaggaggatatatatacatctcctttctttggaggataac 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50980141 ttcatcacgagagcaagacaaccatggtccatgatggttgtcttcaggaatattcctacctaggaggatatatatacatctcctttctttggaggataac 50980240  T
Q  164 gtccttgcccctatatttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatctgtagaggggacatgaatatttcagc 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50980241 gtccttgcccctatatttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatctgtagaggggacatgaatatttcagc 50980340  T
Q  264 tcatggttggtactgtattttctagattaaacaatcctcaaattcagtgggccc-ggtgcccttggtctttgctga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  50980341 tcatggttggtactgtattttctagattaaacaatcctcaaattcagtgggcccaagtgcccttggtctttgctga 50980416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 64 - 338
Target Start/End: Original strand, 51083275 - 51083550
Alignment:
Q  64 ttcatcacgagagcaagacaaccatggtccatgatggttgtcttcaggaatattcctagctaggaggatatatatacatctcctttctttggaggataac 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51083275 ttcatcacgagagcaagacaaccatggtccatgatggttgtcttcaggaatattcctacctaggaggatatatatacatctcctttctttggaggataac 51083374  T
Q  164 gtccttgcccctatatttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatctgtagaggggacatgaatatttcagc 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51083375 gtccttgcccctatatttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatctgtagaggggacatgaatatttcagc 51083474  T
Q  264 tcatggttggtactgtattttctagattaaacaatcctcaaattcagtgggccc-ggtgcccttggtctttgctga 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  51083475 tcatggttggtactgtattttctagattaaacaatcctcaaattcagtgggcccaagtgcccttggtctttgctga 51083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 7974533 - 7974575
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||| ||||||||||| |||||||||||||||||||    
T  7974533 catatattatgcattatccataccaactgagctaagctcacga 7974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 50980073 - 50980111
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctca 49  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  50980073 atatattatgcattatccatactaactgagctaagctca 50980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 49
Target Start/End: Original strand, 51083207 - 51083245
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctca 49  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  51083207 atatattatgcattatccatactaactgagctaagctca 51083245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 20413774 - 20413815
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacga 52  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  20413774 atatattatgtattatccatatcaactgagctaagctcacga 20413815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10498716 - 10498760
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  10498716 catatattatgcattgtccataccaactgagctaagctcacgagg 10498760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 48315045 - 48315089
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  48315045 catatattatgcattatccttaccaactgagctaagctcacgagg 48315089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 52535886 - 52535930
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| || |||||||||||| |||||||||||||    
T  52535886 catatattatgtattgtctatactaactgagttaagctcacgagg 52535930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 10843802 - 10843845
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  10843802 catatattatgtattattcataccaactgagttaagctcacgag 10843845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 21628910 - 21628953
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| |||||||| || |||||||||||||||||||||    
T  21628910 atatattatgcattatccaaaccaactgagctaagctcacgagg 21628953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 27185517 - 27185474
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  27185517 catatattatgtattgtccctaccaactgagctaagctcacgag 27185474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 35863834 - 35863885
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagggctaaat 61  Q
    ||||||||||||||| ||| ||| |||||||||||||| |||||| ||||||    
T  35863834 catatattatgtattgtccttaccaactgagctaagcttacgaggactaaat 35863885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 19126589 - 19126547
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||    
T  19126589 catatattatgcattatccttactaactgagttaagctcacga 19126547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 33633337 - 33633383
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||| || |||||||||||| |||||||||||||    
T  33633337 tacatatattatgcattgtctatactaactgagttaagctcacgagg 33633383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 42269340 - 42269298
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||    
T  42269340 tacatatattatgcattgtccatactaactgagctaaactcac 42269298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 48376877 - 48376831
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  48376877 tacatatattatgcattatctttaccaactgagctaagctcacgagg 48376831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 53633636 - 53633682
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  53633636 tacatatattatgcattatccttaccaactgagttaagctcacgagg 53633682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 2186446 - 2186491
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||| ||||||| ||||||| |||| |||||||    
T  2186446 tacatatattatgtattgtccataccaactgagttaagttcacgag 2186491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 5117250 - 5117205
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  5117250 tacatatattatgtattgtccttatcaactgagctaagctcacgag 5117205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 33404270 - 33404229
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctca 49  Q
    ||||||||||||||||| ||||||  ||||||||||||||||    
T  33404270 tacatatattatgtattgtccatatcaactgagctaagctca 33404229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 38108475 - 38108520
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||| ||||||||||||||||| |||| | |||||||||||||    
T  38108475 tacatattttatgtattatccataccaactaaactaagctcacgag 38108520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1149090 - 1149134
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  1149090 catatattatgcattgtccttaccaactgagctaagctcacgagg 1149134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 14894752 - 14894708
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||| ||||||||||| ||||||||||    
T  14894752 catatattatgcattgtccatagtaactgagctacgctcacgagg 14894708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 16980375 - 16980419
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  16980375 catatattatgcattgtccttaccaactgagctaagctcacgagg 16980419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 18870746 - 18870790
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  18870746 catatattatgcattgtccctaccaactgagctaagctcacgagg 18870790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 21331438 - 21331482
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||  |||||||||||||||||||||    
T  21331438 catatattatgcattgtccataacaactgagctaagctcacgagg 21331482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 21506779 - 21506823
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  21506779 catattttatgcattgtccataccaactgagctaagctcacgagg 21506823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22722442 - 22722398
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| | |||||||||||||||||||||||||||    
T  22722442 catattttatgcattgttcatactaactgagctaagctcacgagg 22722398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 23147999 - 23148039
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||||| ||| ||| |||||||||||||||||    
T  23147999 catatattatgtattgtccttaccaactgagctaagctcac 23148039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 25340945 - 25340989
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  25340945 catattttatgcattgtccataccaactgagctaagctcacgagg 25340989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 27999730 - 27999762
Alignment:
Q  22 attatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| |||||||||||||||||||||    
T  27999730 attatccataccaactgagctaagctcacgagg 27999762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 29631226 - 29631182
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  29631226 catatattatgcattgtccataccaactgagctaagctcatgagg 29631182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 30050449 - 30050493
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||||||||||||  ||||||||||||    
T  30050449 catatattatgcattgtccatactaactgagtcaagctcacgagg 30050493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 43345028 - 43345072
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| | ||||| ||||||||||| |||||||||    
T  43345028 catatattatgtattgttcataccaactgagctaaactcacgagg 43345072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 44579676 - 44579632
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  44579676 catattttatgcattgtccataccaactgagctaagctcacgagg 44579632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 48531318 - 48531274
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| |||||||||||||  || |||||||||||||||||||||    
T  48531318 catattttatgtattatcccaaccaactgagctaagctcacgagg 48531274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 48796239 - 48796283
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| |||| ||||||||||||||||||||||||    
T  48796239 catatcttatgcattgtccaaactaactgagctaagctcacgagg 48796283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 53996339 - 53996299
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  53996339 catatattatgcattgtccataccaactgagctaagctcac 53996299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 55066621 - 55066661
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  55066621 catatattatgcattatccgtaccaactgagctaagctcac 55066661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 32015793 - 32015729
Alignment:
Q  178 atttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatctgtag 242  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  32015793 atttcttctcaagctccctaacgagcctgacatgaattttgcggaaacccttcctcaatctgtag 32015729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 9311949 - 9311995
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  9311949 tacatatattatgtattattcataccaactgagttaagctcacgagg 9311995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 5655328 - 5655372
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||    
T  5655328 catatattatgtattgtccctaccaactgagctaagctcacgagg 5655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 12333589 - 12333633
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||    
T  12333589 catattttatgcattgtccatactaactgagctaagctcacgagg 12333633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20744178 - 20744134
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  20744178 catatattatgcattgtccataccaactgagctaagctcacgagg 20744134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 32053828 - 32053784
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  32053828 catatattatgcattgtccataccaactgagctaagctcacgagg 32053784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 2473643 - 2473600
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||    
T  2473643 catatattatgtattgtccctactaactgagctaacctcacgag 2473600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 8211620 - 8211663
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||    
T  8211620 atatattatgcattatccataccaactgagctatgctcacgagg 8211663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 9444815 - 9444772
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    |||||||||| | |||||||||| ||||||||||||||||||||    
T  9444815 catatattatattttatccataccaactgagctaagctcacgag 9444772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 24248207 - 24248164
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||    
T  24248207 tacatatattatgtattatccttaccaactgtgctaagctcacg 24248164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 24269923 - 24269880
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||    
T  24269923 catattttatgcattgtccatactaactgagctaagctcacgag 24269880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 6799682 - 6799637
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||| |||||  |||||||| ||||||||||||    
T  6799682 tacatatattatgtattgtccatgttaactgagttaagctcacgag 6799637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 26400904 - 26400863
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||| ||||||| || |||||||||||||||    
T  26400904 catatattatgtattgtccataccaattgagctaagctcacg 26400863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4494892 - 4494936
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  4494892 catattttatgcattgtccataccaactgagctaagctcacgagg 4494936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 7445462 - 7445522
Alignment:
Q  178 atttcttctcaagctatctaaagagcctgacatgaattttgcggaaaccctttctcaatct 238  Q
    |||||||||| ||||  ||||  |||||||||||||| |||||||| ||||| ||||||||    
T  7445462 atttcttctcgagctccctaacaagcctgacatgaatcttgcggaatcccttcctcaatct 7445522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 8311512 - 8311465
Alignment:
Q  8 tacatatattatgt--attatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||  || |||||||| ||||||||||||||||||||    
T  8311512 tacatatattatgtgcataatccataccaactgagctaagctcacgag 8311465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 8810680 - 8810636
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||  ||| |||||||||||||||||||||    
T  8810680 catatattatgtattgtctttaccaactgagctaagctcacgagg 8810636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9677275 - 9677231
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||| || |||||||||||||||||||||    
T  9677275 catatattatgcattgtccaaaccaactgagctaagctcacgagg 9677231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17382124 - 17382080
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||    
T  17382124 catatattatacattgtccataccaactgagctaagctcacgagg 17382080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20720800 - 20720844
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||| ||| ||||||  |||||||||||||||||||    
T  20720800 tacatatattatgcattgtccataacaactgagctaagctcacga 20720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 21847234 - 21847190
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||| ||| |||||||||||||||| ||||    
T  21847234 catatattatgtattgtccctaccaactgagctaagctcaagagg 21847190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 22414469 - 22414509
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||| ||||||||||||||| |||||    
T  22414469 catatattatgcattatccttactaactgagctaaactcac 22414509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 40752860 - 40752904
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  40752860 catatattatgtattgtccatactaactgagctaagctcacgagg 40752904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 10244767 - 10244717
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagggctaaa 60  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| |||||    
T  10244767 catatattatgcattgtccataccaactgagctaagctcacgaggactaaa 10244717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 39801746 - 39801702
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  39801746 catatattatgcattgtccataccaactgagctaagctcacgagg 39801702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 429199 - 429242
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  429199 catatattatgtattatccatatcaactgagttaagctcacgag 429242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 5352368 - 5352325
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  5352368 atatattatgtattgtccttaccaactgagctaagctcacgagg 5352325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 5526764 - 5526721
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||    
T  5526764 atatattatgcattgtccataccaactgagctaagctcacgagg 5526721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 21164780 - 21164827
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagggcta 58  Q
    |||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  21164780 atatattatgcattatccataccaactgagttaagctcacgagagcta 21164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 48980526 - 48980483
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||    
T  48980526 atatattatgcattgtccataccaactgagctaagctcacgagg 48980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 1120050 - 1120096
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| |||  || |||||||||||||||||||||    
T  1120050 tacatatattatgtattgtcctcaccaactgagctaagctcacgagg 1120096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 30463970 - 30464012
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||| |||||| |||||||||||||||| |||||||    
T  30463970 catatattatgcattatctatactaactgagctaaactcacga 30464012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 43498530 - 43498484
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||| |||||||||  ||||||||||||||||||    
T  43498530 tacatatattatgcattgtccatactagttgagctaagctcacgagg 43498484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 5833082 - 5833041
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||    
T  5833082 catatattatgcattatccctaccaactgagctaagctcacg 5833041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 24657012 - 24656971
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctca 49  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||    
T  24657012 tacatattttatgcattatccataccaactgagctaagctca 24656971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 26816685 - 26816726
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||    
T  26816685 catatattatgcattatccctaccaactgagctaagctcacg 26816726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 3953481 - 3953437
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||||  ||||||||||||||||||||    
T  3953481 catatattatgcattgtccataccgactgagctaagctcacgagg 3953437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5584687 - 5584643
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||    
T  5584687 catatattatgtattatctttaccaattgagctaagctcacgagg 5584643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5589647 - 5589603
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||    
T  5589647 catatattatgtattatctttaccaattgagctaagctcacgagg 5589603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 8683110 - 8683066
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||    
T  8683110 catatattatgcattgtctataccaactgagctaagctcacgagg 8683066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 14046632 - 14046676
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||    
T  14046632 catatattatgcattacccataccaactgagataagctcacgagg 14046676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 14356662 - 14356706
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||    
T  14356662 catatattatgcattacccataccaactgagataagctcacgagg 14356706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 19416554 - 19416510
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  19416554 catattttatgcattgtccataccaactgagctaagctcacgagg 19416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 20149715 - 20149755
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacg 51  Q
    |||||||||||||||||| ||| ||||| ||||||||||||    
T  20149715 atatattatgtattatccttaccaactgtgctaagctcacg 20149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20243291 - 20243251
Alignment:
Q  14 tattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||| ||| ||||||| |||||||||||||||||||||    
T  20243291 tattatgcattgtccataccaactgagctaagctcacgagg 20243251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 21105643 - 21105603
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  21105643 catatattatgcattttccataccaactgagctaagctcac 21105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 22600471 - 22600427
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||| || ||| ||||||||||||||||||||    
T  22600471 catatattatgcattattcaaactgactgagctaagctcacgagg 22600427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 27462457 - 27462501
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||| ||||||||||    
T  27462457 catatattatgcattgtccataccaactgagctatgctcacgagg 27462501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 34369519 - 34369475
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||||||||||| ||| ||||||||||    
T  34369519 catatattatgcattgtccatactaactgaactatgctcacgagg 34369475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 35142170 - 35142214
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||  |||||||||||||||||||||    
T  35142170 catatattatgcattgtccatatcaactgagctaagctcacgagg 35142214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 38088038 - 38088082
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||| || ||| ||| |||||||||||||||||||||    
T  38088038 catatattatgttttgtccttaccaactgagctaagctcacgagg 38088082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 41527600 - 41527556
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  41527600 catatattatgcattgtccataccaactaagctaagctcacgagg 41527556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 43629099 - 43629143
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||| |||||||||| ||||||||||||||||||| || ||||||    
T  43629099 catacattatgtattgtccatactaactgagctaaacttacgagg 43629143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 44558795 - 44558839
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  44558795 catatattatgcattgtccataccaactgagctaaactcacgagg 44558839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 46737825 - 46737781
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||| || |||||||||||||||||||||    
T  46737825 catatattatgcattgtccaaacaaactgagctaagctcacgagg 46737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 15381675 - 15381629
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  15381675 tacatatattatgtattgtccctactaactgagctaagctcacgagg 15381629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 22523033 - 22523077
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||    
T  22523033 catatattatgtattgtccataccaactgagctaagctcacgagg 22523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 4238801 - 4238759
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  4238801 tacatatattatgcattgtccatactaactgagctaagctcac 4238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 8761583 - 8761629
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  8761583 tacatatattatgtattgtccataccaactgagttaagctcacgagg 8761629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 18678179 - 18678133
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||||    
T  18678179 tacatatattatgtattatcaatactaattgagttaagctcacgagg 18678133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 9383230 - 9383274
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  9383230 catatattatgcattgtccataccaactgagctaagctcacgagg 9383274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 10195683 - 10195727
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||    
T  10195683 catatattatgcattatccatatcaactgagctaagctcacgagg 10195727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 31543052 - 31543008
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| | |||||||||||||||||||    
T  31543052 catatattatgcattatccataccatctgagctaagctcacgagg 31543008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 45
Target Start/End: Complemental strand, 15617692 - 15617657
Alignment:
Q  10 catatattatgtattatccatactaactgagctaag 45  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15617692 catatattatgcattatccatactaactgagctaag 15617657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 27934879 - 27934922
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||    
T  27934879 atatattatgtattgtccttaccaactgagctaagctcacgagg 27934922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 44496721 - 44496764
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  44496721 catatattatgtattgtccttaccaactgagctaagctcacgag 44496764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 346143 - 346189
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||| || || |||||||||||||||||||||    
T  346143 tacatatattatgcattattcaaaccaactgagctaagctcacgagg 346189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 12599886 - 12599928
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||    
T  12599886 catatattatgtattgtccatactaactgagttaagcttacga 12599928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 29599978 - 29599936
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgag 53  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  29599978 atatattatgcattatccaaaccaactgagctaagctcacgag 29599936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 32063615 - 32063653
Alignment:
Q  16 ttatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  32063615 ttatgcattatccataccaactgagctaagctcacgagg 32063653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 41939127 - 41939173
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||||| ||| |||| ||||||||||||||||    
T  41939127 tacatatattatgcattatccctaccaactaagctaagctcacgagg 41939173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 44526166 - 44526124
Alignment:
Q  12 tatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||| ||| ||||||| |||||||||||||||||||||    
T  44526166 tatattatgcattgtccataccaactgagctaagctcacgagg 44526124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 10156057 - 10156016
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  10156057 catatattatgtattgtccttaccaactgagctaagctcacg 10156016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 34464430 - 34464475
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgaggg 55  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||||||||    
T  34464430 catatattatgcattgtccataccaactgagctaaactcacgaggg 34464475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 2257011 - 2256967
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  2257011 catatattatgcattgtccataccaactgagttaagctcacgagg 2256967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 4122034 - 4122078
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||||    
T  4122034 catatattatgcattgtccataccagctgagctaagctcacgagg 4122078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 10109665 - 10109713
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagggc 56  Q
    ||||||| ||||| ||| |||| || |||||||||||||||||||||||    
T  10109665 tacatattttatgcattgtccaaaccaactgagctaagctcacgagggc 10109713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13787551 - 13787595
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||||||||||| || ||||||||||    
T  13787551 catatattatgcattgtccatactaactgagttatgctcacgagg 13787595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16877164 - 16877120
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||||    
T  16877164 catatattatgcattgtccataccagctgagctaagctcacgagg 16877120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16989295 - 16989251
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||||    
T  16989295 catatattatgcattgtccataccagctgagctaagctcacgagg 16989251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20455931 - 20455887
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| || ||||||||||||||||||    
T  20455931 catatattatgcattgtccataccaattgagctaagctcacgagg 20455887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 32513714 - 32513670
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||||||| ||||||| | |||||||||||||||||||    
T  32513714 catattttatgtattgtccataccacctgagctaagctcacgagg 32513670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 33064026 - 33063982
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||  |||||||||||||||||||||    
T  33064026 catatattatgcattgtccatatcaactgagctaagctcacgagg 33063982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 33117430 - 33117466
Alignment:
Q  14 tattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  33117430 tattatgcattattcatactaactgagctaagctcac 33117466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 34191327 - 34191375
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagggc 56  Q
    ||||||||||||| ||| ||| ||| |||||||||||||||| ||||||    
T  34191327 tacatatattatgcattgtccctaccaactgagctaagctcatgagggc 34191375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 34977244 - 34977200
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  34977244 catatattatgcattgtccataccaactgagttaagctcacgagg 34977200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 43826461 - 43826501
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctc 48  Q
    ||||||||||||||||| ||| ||| |||||||||||||||    
T  43826461 tacatatattatgtattgtccttaccaactgagctaagctc 43826501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 52279551 - 52279514
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaag 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52279551 tacatatattatgtattatccatactaactgagctaag 52279514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 1794636 - 1794592
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  1794636 catatattatgcattgtccatactaactgagctaagctcacgagg 1794592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 40268252 - 40268206
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| | ||||||| |||||||||||||||||||||    
T  40268252 tacatatattatgtactgtccataccaactgagctaagctcacgagg 40268206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 27449466 - 27449510
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||    
T  27449466 catatattatgcattgtccatattaactgagctaagctcacgagg 27449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 42045393 - 42045437
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  42045393 catatattatgcattgtccataccaactgagctaagctcacgagg 42045437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 43611466 - 43611422
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||    
T  43611466 tacatatattatgtattgtccataccaactgagctaaactcacga 43611422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 15602196 - 15602247
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagggctaa 59  Q
    ||||||||||||| ||| ||||||| |||||||||| |||||||||| ||||    
T  15602196 tacatatattatgcattgtccataccaactgagctatgctcacgaggactaa 15602247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 27127263 - 27127220
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||||||| |||||||||||||||||||| ||||    
T  27127263 atatattatgcattatccttactaactgagctaagctcatgagg 27127220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 41677609 - 41677652
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||    
T  41677609 tacatatattatgtattgtccttaccaactgagctaagctcacg 41677652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 41769837 - 41769880
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| |||||||| || |||||||||||||||||||||    
T  41769837 atatattatgcattatccaaaccaactgagctaagctcacgagg 41769880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 41884827 - 41884870
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||| |||| |||||||||||||| |||||||||    
T  41884827 atatattatgtattgtccaaactaactgagctaaactcacgagg 41884870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 2613764 - 2613718
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  2613764 tacatattttatgcattgtccataccaactgagctaagctcacgagg 2613718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 4295273 - 4295231
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgag 53  Q
    |||||||||| |||||||| || ||||||||||||||||||||    
T  4295273 atatattatgcattatccaaaccaactgagctaagctcacgag 4295231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 6094464 - 6094418
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||  ||||||||||| ||||||| |||||||||||||    
T  6094464 tacatatattatacattatccataccaactgagttaagctcacgagg 6094418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 24978284 - 24978242
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    |||||||||||||||||| |||| ||||||| |||||||||||    
T  24978284 catatattatgtattatctataccaactgagttaagctcacga 24978242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 1834464 - 1834509
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||||||| |||||| |||||||| |||| |||||||    
T  1834464 tacatatattatgtattgtccatattaactgagttaagttcacgag 1834509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 19620616 - 19620575
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  19620616 catatattatgtattgtccttaccaactgagctaagctcacg 19620575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 25533013 - 25532964
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagggctaa 59  Q
    ||||||||||| ||| ||||||| |||||| |||||||||||||| ||||    
T  25533013 catatattatgcattgtccataccaactgaactaagctcacgaggactaa 25532964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 34263688 - 34263729
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||||| ||| |||||||| |||||||||||||    
T  34263688 catatattatgtattctccctactaactaagctaagctcacg 34263729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 45140027 - 45140068
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||    
T  45140027 catatattatgcattgtccataccaactgagctaagctcacg 45140068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 8253779 - 8253739
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  8253779 catatattatgcattgtccataccaactgagctaagctcac 8253739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 8269389 - 8269433
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||| ||| |||||||||||| ||||||||    
T  8269389 catatattatgtattgtccttaccaactgagctaagttcacgagg 8269433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 21400044 - 21400088
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  21400044 catatattatgcattgtccctaccaactgagctaagctcacgagg 21400088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 24695599 - 24695555
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| | ||||| ||||||||||| |||||||||    
T  24695599 catatattatgtattgttcataccaactgagctaaactcacgagg 24695555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 24752673 - 24752713
Alignment:
Q  14 tattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||| ||| ||||||| |||||||||||||||||||||    
T  24752673 tattatgcattgtccataccaactgagctaagctcacgagg 24752713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 26803472 - 26803516
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||| ||||||||    
T  26803472 catatattatgcattgtccataccaactgagctaagttcacgagg 26803516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 27172743 - 27172787
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||| || ||||||| ||||||| |||||||||||||    
T  27172743 catatattatgttttgtccataccaactgagttaagctcacgagg 27172787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 39252276 - 39252320
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||||||| || |||  |||||||||||||||||||    
T  39252276 tacatatattatgtattgtcgatatcaactgagctaagctcacga 39252320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 41763176 - 41763220
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||||||| ||| |||||||||||||||||||||    
T  41763176 catattttatgcattatccctaccaactgagctaagctcacgagg 41763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 48681954 - 48681998
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| | ||||| |||||||||||||||||||||    
T  48681954 catatattatgcattgttcataccaactgagctaagctcacgagg 48681998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 49183213 - 49183169
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  49183213 catatattatgtattgtccttaccaactgagctaaactcacgagg 49183169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 52043313 - 52043269
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||||||||||| ||||||||||| |||||||||    
T  52043313 catattttatgcattatccataccaactgagctaaactcacgagg 52043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 52441532 - 52441576
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||    
T  52441532 catatattatgcattgtctataccaactgagctaagctcacgagg 52441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 33451370 - 33451414
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||    
T  33451370 catatattatgcattatccataccaactgagctaagctcacgagg 33451414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 21557475 - 21557429
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  21557475 tacatatattatgcattgtccatactaactgagttaagctcacgagg 21557429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 15188941 - 15188897
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  15188941 tacatatattatgcattgtccatactaactgagttaagctcacga 15188897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 23816830 - 23816786
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  23816830 catatattatgcattatccttaccaactgagctaagctcacgagg 23816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37938535 - 37938491
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  37938535 catatattatgcattatccataccaactgagctaaactcacgagg 37938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 37999441 - 37999485
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| ||||||| |||||||||||||    
T  37999441 catatattatgcattatccataccaactgagttaagctcacgagg 37999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 35682711 - 35682762
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagggctaa 59  Q
    ||||||||||||| ||| ||| ||| ||||||||||||||||||||| ||||    
T  35682711 tacatatattatggattgtccgtaccaactgagctaagctcacgaggactaa 35682762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 41625236 - 41625193
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||||    
T  41625236 tacatatattatgcattattcataccaactgagctaagctcacg 41625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 44293617 - 44293571
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||| || |||| |||||||||||||||||||||    
T  44293617 tacatatattatgcattgtctataccaactgagctaagctcacgagg 44293571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 7765686 - 7765645
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    |||||| |||||| ||||||||| ||||||||||||||||||    
T  7765686 catataatatgtaatatccataccaactgagctaagctcacg 7765645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 25163225 - 25163184
Alignment:
Q  4 aacatacatatattatgtattatccatactaactgagctaag 45  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  25163225 aacatgcatatattatgcattatccctactaactgagctaag 25163184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 8717496 - 8717540
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  8717496 catatattatgcattgtccataccaactgagctaaactcacgagg 8717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 11224576 - 11224548
Alignment:
Q  22 attatccatactaactgagctaagctcac 50  Q
    |||||||||||||||||||||||||||||    
T  11224576 attatccatactaactgagctaagctcac 11224548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 11709026 - 11708982
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  11709026 catatattatgcattgtccctaccaactgagctaagctcacgagg 11708982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 13286171 - 13286127
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||    
T  13286171 catatattatgcattgtctataccaactgagctaagctcacgagg 13286127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 13357462 - 13357506
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  13357462 catatattatgcattgtccataccaactgagttaagctcacgagg 13357506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 15572191 - 15572151
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  15572191 catatattatgttttatccctaccaactgagctaagctcac 15572151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17704053 - 17704009
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  17704053 catatattatgcattgtccttaccaactgagctaagctcacgagg 17704009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 18942958 - 18942918
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  18942958 catatattatgcattatccctaccaactgagctaagctcac 18942918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 19163557 - 19163601
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||| |||||| ||| ||||||| |||||||||||||||||||||    
T  19163557 cataaattatgcattgtccataccaactgagctaagctcacgagg 19163601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 23852951 - 23852907
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| |||||||  ||||||||||||||||||||    
T  23852951 catatattatgcattgtccataccgactgagctaagctcacgagg 23852907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 27718915 - 27718959
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||  |||||||||||||||||||||    
T  27718915 catatattatgcattgtccatatcaactgagctaagctcacgagg 27718959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 30427771 - 30427731
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  30427771 catatattatgcattgtccataccaactgagctaagctcac 30427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 34968595 - 34968551
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| |||||||||| | ||||||||    
T  34968595 catatattatgcattatccataccaactgagctaggttcacgagg 34968551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 39821924 - 39821880
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  39821924 catatattatgcattgtccctaccaactgagctaagctcacgagg 39821880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 42113648 - 42113692
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| |||||||| ||||| ||||||||||||||||||    
T  42113648 catattttatgcattatccaaactaattgagctaagctcacgagg 42113692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 43962045 - 43962089
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  43962045 catatattatgtattgtccttaccaactgagctaagcccacgagg 43962089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 21052578 - 21052622
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||    
T  21052578 catatattatgtattatccataccaactgagctaaactcacgagg 21052622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 36035873 - 36035830
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  36035873 atatattatgcattatccaaactaactgagctaagctcacgagg 36035830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 2186354 - 2186398
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  2186354 catatattatgcattgtccataccaactgagctaagctcacgagg 2186398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 2587719 - 2587763
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||    
T  2587719 tacatatattatgcattatccataccaattgagctaagctcacga 2587763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15849274 - 15849230
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||    
T  15849274 catattttatgcattatccataccaactgagctaagctcacgagg 15849230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17728122 - 17728078
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||||||||||| |||||||||| ||||||||||    
T  17728122 catatattatgcattatccataccaactgagctatgctcacgagg 17728078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 24665012 - 24665056
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  24665012 catatattatgcattctccataccaactgagctaagctcacgagg 24665056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37193289 - 37193245
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||    
T  37193289 catatattatacattgtccatactaactgagctaagctcacgagg 37193245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 52270051 - 52270095
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  52270051 catatattatgcattgtccataccaactgagctaagctcacgagg 52270095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 3527429 - 3527386
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||    
T  3527429 atatattatgtattgtccctactaactgagctaagttcacgagg 3527386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 5924689 - 5924647
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||||| ||||||  |||||||||||||||||||    
T  5924689 catatattatgtattgtccatagcaactgagctaagctcacga 5924647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 8464094 - 8464136
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||    
T  8464094 tacatatattatgtattgtccttaccaactgagctaagctcac 8464136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 10564484 - 10564526
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||    
T  10564484 tacatatattatgtattgtccataccaactgagctaaactcac 10564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 11198806 - 11198760
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  11198806 tacatattttatgcattctccataccaactgagctaagctcacgagg 11198760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32006542 - 32006496
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  32006542 tacatatattatgcattatccctaccaactgagctaaactcacgagg 32006496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 38340339 - 38340385
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||| ||||||||| ||||||| ||||||| |||||||||||||    
T  38340339 tacatattttatgtattgtccataccaactgagttaagctcacgagg 38340385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 43155119 - 43155077
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  43155119 catatattatgcattatccataacaactgagctaagctcacga 43155077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 36569215 - 36569170
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||| ||| | |||||||| |||||||||||||||||    
T  36569215 tacatatattatgcatttttcatactaattgagctaagctcacgag 36569170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 39973170 - 39973215
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||||| ||||||   |||||||||||||||||||||||    
T  39973170 tacatatattatgcattatctgaactaactgagctaagctcacgag 39973215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 2034117 - 2034157
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacg 51  Q
    |||||||||| ||||||||||| ||||||||||| ||||||    
T  2034117 atatattatgcattatccataccaactgagctaaactcacg 2034157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 6087787 - 6087747
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| |||||| |||| |||||||||||||||||    
T  6087787 catatattatgcattatctataccaactgagctaagctcac 6087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 7230320 - 7230276
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  7230320 catatattatgcattgtccttaccaactgagctaagctcacgagg 7230276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 8734892 - 8734848
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  8734892 tacatatattatgcattgtccatactaattgagctaagttcacga 8734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9946467 - 9946423
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  9946467 catattttatgcattgtccataccaactgagctaagctcacgagg 9946423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 11949784 - 11949828
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||    
T  11949784 catatattatgcattgtccataccaactgagctaagctcatgagg 11949828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 12322713 - 12322669
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  12322713 catatattatgcattgtccgtaccaactgagctaagctcacgagg 12322669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 16743305 - 16743345
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  16743305 catatattatgcattatccatatcaactgagctaagctcac 16743345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 19854605 - 19854565
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  19854605 catatattatgcattgtccataccaactgagctaagctcac 19854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 20383528 - 20383488
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||| ||||||| |||||||||||||||||    
T  20383528 catatattatgcattgtccataccaactgagctaagctcac 20383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 20799415 - 20799459
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  20799415 catatattatgcattgtccctaccaactgagctaagctcacgagg 20799459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 23809989 - 23809945
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||  || ||||||| |||||||||||||||||||||    
T  23809989 catatattatgctttgtccataccaactgagctaagctcacgagg 23809945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 24885821 - 24885865
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||||||| ||||||| ||||||| |||||||||||||    
T  24885821 catattttatgtattgtccataccaactgagttaagctcacgagg 24885865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 35021488 - 35021532
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||    
T  35021488 catattttatgtattgtccatatcaactgagctaagctcacgagg 35021532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 38416097 - 38416057
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  38416097 catatattatgcattatccttaccaactgagctaagctcac 38416057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 38453305 - 38453261
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||| | |||||||||||||||||||||    
T  38453305 catatattatgcattgtccatgccaactgagctaagctcacgagg 38453261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 43034363 - 43034407
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||||||| |||||||||||||    
T  43034363 catatattatgcattgtccataccaactgagttaagctcacgagg 43034407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 47814272 - 47814316
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||| || ||||||| |||||||||||||| ||||||    
T  47814272 catatattatgtgttgtccataccaactgagctaagcttacgagg 47814316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 50362160 - 50362204
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  50362160 catatattatgcattgtccctaccaactgagctaagctcacgagg 50362204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 50442768 - 50442808
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||| ||||||| ||| |||||||||||||||||    
T  50442768 catatattatgcattatccctaccaactgagctaagctcac 50442808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 51458718 - 51458678
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||| ||||||||| ||||||| |||||||||||||||||    
T  51458718 catattttatgtattgtccataccaactgagctaagctcac 51458678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 2249435 - 2249481
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  2249435 tacatatattatgtattgtccttactaactgagttaagctcacgagg 2249481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 20211320 - 20211276
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||||| ||| ||||||| |||||||||||||    
T  20211320 catatattatgtattatccctaccaactgagataagctcacgagg 20211276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 20927679 - 20927639
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcac 50  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  20927679 catatattatgtattgtccataccaactgagctaagctcac 20927639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 37932370 - 37932326
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||    
T  37932370 catatattatgcattgtccataccaactgagctaagctcacgagg 37932326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 39980548 - 39980504
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||    
T  39980548 catattttatgcattatccataccaactgagctaagctcacgagg 39980504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 2839837 - 2839794
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| |||||||| || |||||||||||||||||||||    
T  2839837 atatattatgcattatccaaaccaactgagctaagctcacgagg 2839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 10199058 - 10199015
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||    
T  10199058 atatattatgcattgtccataccaactgagctaagctcacgagg 10199015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 11156876 - 11156833
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||||||||||||||  |||||| ||||||||||||||    
T  11156876 atatattatgtattatccataacaactgaactaagctcacgagg 11156833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 19068460 - 19068499
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctca 49  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  19068460 catatattatgcattatccataccaactgagctaagctca 19068499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 20370152 - 20370195
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||    
T  20370152 atatattatgcattatccctaccaactgagctaagctcacgagg 20370195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 26409295 - 26409252
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||    
T  26409295 tacatatattatgcattgtccataccaactgagctaagctcacg 26409252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 1512897 - 1512851
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||||||||    
T  1512897 tacatatattatgcattgtccctactaactgagttaagctcacgagg 1512851  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 5107266 - 5107312
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagggc 56  Q
    ||||||||||| ||||| ||||| ||||||| |||||||||||||||    
T  5107266 catatattatgcattattcataccaactgagttaagctcacgagggc 5107312  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 17261833 - 17261787
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| ||||||| ||| ||||||| |||||||||    
T  17261833 tacatatattatgtattgtccataccaaccgagctaaactcacgagg 17261787  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 27219330 - 27219284
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||||| ||  | |||||||||||||||||||||||    
T  27219330 tacatatattatgtattgtctctgctaactgagctaagctcacgagg 27219284  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 32565566 - 32565520
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||| ||||||| ||| | |||||||||||||||||||    
T  32565566 tacatatattatgcattatccctaccagctgagctaagctcacgagg 32565520  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 6234821 - 6234862
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacg 51  Q
    ||||||||||| ||| | ||||||||||||||||||||||||    
T  6234821 catatattatgcattgttcatactaactgagctaagctcacg 6234862  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 36818972 - 36818931
Alignment:
Q  11 atatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||| |||| ||||||| |||||||||||||||||||    
T  36818972 atatattatatattgtccataccaactgagctaagctcacga 36818931  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 1808614 - 1808658
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||||||||||| |||||||||||| ||||||||    
T  1808614 catattttatgcattatccataccaactgagctaagttcacgagg 1808658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 5485226 - 5485182
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  5485226 catatattatgcattgtccctaccaactgagctaagctcacgagg 5485182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 6489047 - 6489003
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  6489047 catatattatgcattgtccctaccaactgagctaagctcacgagg 6489003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 6624816 - 6624772
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||| | |||||||||||||||||||||    
T  6624816 catatattatgcattgtccatgccaactgagctaagctcacgagg 6624772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15889451 - 15889407
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  15889451 catatattatgcattgtccctaccaactgagctaagctcacgagg 15889407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16036867 - 16036823
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||||| | ||||||||||||||| |||||    
T  16036867 catatattatgtattgtccatgccaactgagctaagctctcgagg 16036823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 19248519 - 19248475
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| || |||| |||||||||||||||||||||    
T  19248519 catatattatgcattgtctataccaactgagctaagctcacgagg 19248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 22522822 - 22522866
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| ||| |||||||||||||||||    
T  22522822 catatattatgcattgtccataccaaccgagctaagctcacgagg 22522866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 24485739 - 24485695
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  24485739 catatattatgcattgtccataccaactaagctaagctcacgagg 24485695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 27679538 - 27679486
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagggctaaata 62  Q
    ||||||||||| ||||||  ||| |||||||||||||||||| || |||||||    
T  27679538 catatattatgcattatctttaccaactgagctaagctcacggggactaaata 27679486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 28207172 - 28207128
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  28207172 catattttatgcattgtccataccaactgagctaagctcacgagg 28207128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 34436891 - 34436847
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  34436891 catatattatgcattgtccctaccaactgagctaagctcacgagg 34436847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 36321515 - 36321559
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||| ||| |||||||||||||||||||||    
T  36321515 catatattatgcattgtccttaccaactgagctaagctcacgagg 36321559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 36739604 - 36739648
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| |||||| | | ||||||||||||||||||||||    
T  36739604 catatattatgcattatcaaaaataactgagctaagctcacgagg 36739648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 42505912 - 42505868
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||| ||| ||||||| |||||||||||||| ||||||    
T  42505912 catatattatgcattgtccataccaactgagctaagcttacgagg 42505868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 223198 - 223154
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||    
T  223198 catattttatgtattgtccataccaactgagctaagctcacgagg 223154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 185303 - 185259
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  185303 catattttatgcattgtccataccaactgagctaagctcacgagg 185259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 40038 - 39995
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgag 53  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||    
T  40038 catatattatgcattgtccataccaactgagctaagctcacgag 39995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 45452 - 45408
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| |||| || ||||||| |||||||||||||    
T  45452 catatattatgtattgtccaaaccaactgagttaagctcacgagg 45408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 54
Target Start/End: Complemental strand, 58888 - 58849
Alignment:
Q  15 attatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  58888 attatgcattatccataccaactgagctaagctcacgagg 58849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 56824 - 56780
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||  ||| ||||||| |||||||||||||||||||||    
T  56824 catatattatacattgtccataccaactgagctaagctcacgagg 56780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 35220 - 35179
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctca 49  Q
    ||||||||||||| ||| || |||||||||||||||||||||    
T  35220 tacatatattatgcattgtctatactaactgagctaagctca 35179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 1676 - 1632
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    |||||| |||| ||| |||||||||| ||||||||||||||||||    
T  1676 catatactatgcattgtccatactaattgagctaagctcacgagg 1632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 1079 - 1123
Alignment:
Q  8 tacatatattatgtattatccatactaactgagctaagctcacga 52  Q
    ||||||||||||| ||| ||| ||||||||||| |||||||||||    
T  1079 tacatatattatgcattgtccctactaactgagttaagctcacga 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 3181 - 3137
Alignment:
Q  10 catatattatgtattatccatactaactgagctaagctcacgagg 54  Q
    ||||||||||||||| ||  ||| |||||||||||||||||||||    
T  3181 catatattatgtattgtctttaccaactgagctaagctcacgagg 3137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 5263 - 5291
Alignment:
Q  22 attatccatactaactgagctaagctcac 50  Q
    |||||||||||||||||||||||||||||    
T  5263 attatccatactaactgagctaagctcac 5291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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