View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14111_low_26 (Length: 233)
Name: NF14111_low_26
Description: NF14111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14111_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 26169409 - 26169209
Alignment:
| Q |
17 |
agtaacaaatgaatttcaatcttctgtttttggcttagtttgatcataacttcatggatccatgcaccagcagtagtagtcagaccttgagatatctagc |
116 |
Q |
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| T |
26169409 |
agtaacaaataaatttcaatcttctgtttttggcttagtttgatcataacttcatggatccatgcaccagcagtagtagtcagaccttgagatatctagc |
26169310 |
T |
|
| Q |
117 |
atttgttcaggactcattctttcaagctcattttgcctccatgaagcaaaattgtttctgttttgcgcatcagatgccaaagggtaatcttctattctgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26169309 |
atttgttcaggactcattctttcaagctcattttgcctccatgaagcaaaattgtttctgttttgcgcatcagatgccaaagggtaatcttctattctgt |
26169210 |
T |
|
| Q |
217 |
g |
217 |
Q |
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| |
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| T |
26169209 |
g |
26169209 |
T |
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