View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14111_low_27 (Length: 230)
Name: NF14111_low_27
Description: NF14111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14111_low_27 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 9 - 230
Target Start/End: Original strand, 1846006 - 1846227
Alignment:
| Q |
9 |
aatttgtaagtattatattataaatcagacctcttttctctggactcatgaatcagacattttcttttttggactcatgaatcagaccttgtaagaaaat |
108 |
Q |
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| T |
1846006 |
aatttgtaagtattatattataaatcagacctcttttctctggactcatgaatcagacattttcttttttggactcatgaatcagaccttgtaagaaaat |
1846105 |
T |
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| Q |
109 |
gaatatataaatatgcaaataaagttaaggcagttgttgagaattgagattttaatttaaggtattatcaatatcaataccagtcaccaaaataaaaaat |
208 |
Q |
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| T |
1846106 |
gaatatataaatatgtaaataaagttaaggcagttgttgagaattgagattttaatttaaggtattatcaatatcaataccagtcaacaaaataaaaaat |
1846205 |
T |
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| Q |
209 |
aaatcaacatcagcttgatatt |
230 |
Q |
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|||||||||||||||||||||| |
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| T |
1846206 |
aaatcaacatcagcttgatatt |
1846227 |
T |
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