View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14113_low_7 (Length: 301)
Name: NF14113_low_7
Description: NF14113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14113_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 283
Target Start/End: Original strand, 194282 - 194549
Alignment:
| Q |
16 |
aaaatccacctgtctcatgtttgattaataatcctttcattctatgggtttctgatgttgctcaatccctttccctcccttctgctttgctttggattca |
115 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
194282 |
aaaatccacctgtctcatgtttgattaacaatcctttcattccatgggtttctgatgttgctcaatccctttccctcccttctgctttgctttggattca |
194381 |
T |
|
| Q |
116 |
atcatgtgcttccttctcttcttactatcattactatcataaattagtttctttcccttctcaatcccatccccatattcatgttcagctgccatgtatg |
215 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
194382 |
atcatgtgcttccttctctacttactatcattactatcataaattagtttctttcccttctcaatcccatccccatattcatgttcagctgccatgtatg |
194481 |
T |
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| Q |
216 |
cctctgttgaattatgatcaagtccctagcttcttgtatcccaccactccctatccatttcttagaag |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
194482 |
cctctgttgaattatgatcaagtccctagcttcttgtatcccaccactccctatccatttcttagaag |
194549 |
T |
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